View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17232_high_9 (Length: 304)
Name: NF17232_high_9
Description: NF17232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17232_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 101 - 286
Target Start/End: Original strand, 37914451 - 37914636
Alignment:
| Q |
101 |
ataagtcaaaatatgccatgtgtaaaatgagtggtgccagatgaaggtgattaaatatcgggaaatgatgagacatattttcaagttcaacttactcttt |
200 |
Q |
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| T |
37914451 |
ataagttaaaatatgccatgtgtaaaatgagtggtgccagatgaaggtgattaaatatcgggaaatgatgagacatattttcaagttcaacttactcttt |
37914550 |
T |
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| Q |
201 |
tctcatctcatttcaaaacaatacaacaacatgagcaacacaaacatgcttcatcatcacgagatcaaattctatcataacgaaac |
286 |
Q |
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| T |
37914551 |
tctcatctcatttcaaaacaatacaacaacatgagcaacacaaacatgcttcatcatcacgagatcaaattctatcataacgaaac |
37914636 |
T |
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