View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17239_high_19 (Length: 370)

Name: NF17239_high_19
Description: NF17239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17239_high_19
NF17239_high_19
[»] chr1 (84 HSPs)
chr1 (189-351)||(46267494-46267660)
chr1 (34-114)||(19161888-19161968)
chr1 (1-139)||(49395574-49395712)
chr1 (36-160)||(22524076-22524200)
chr1 (34-148)||(586602-586716)
chr1 (1-83)||(42572721-42572803)
chr1 (34-175)||(18609892-18610033)
chr1 (26-117)||(13636111-13636203)
chr1 (26-117)||(19159615-19159707)
chr1 (1-49)||(27487630-27487678)
chr1 (1-49)||(29763183-29763231)
chr1 (63-139)||(48228328-48228404)
chr1 (63-174)||(97949-98060)
chr1 (34-113)||(44598903-44598982)
chr1 (37-136)||(50343968-50344067)
chr1 (34-175)||(9618656-9618794)
chr1 (53-115)||(30194416-30194478)
chr1 (34-91)||(9710597-9710654)
chr1 (34-115)||(29424375-29424456)
chr1 (62-139)||(49429160-49429237)
chr1 (1-50)||(49927465-49927514)
chr1 (1-81)||(13972091-13972171)
chr1 (1-49)||(14174875-14174923)
chr1 (62-142)||(49661758-49661838)
chr1 (34-109)||(4883234-4883309)
chr1 (53-148)||(19914428-19914523)
chr1 (62-113)||(29765554-29765605)
chr1 (34-113)||(44470008-44470087)
chr1 (34-113)||(46886385-46886463)
chr1 (38-113)||(51271592-51271667)
chr1 (62-115)||(94404-94457)
chr1 (1-82)||(6434776-6434857)
chr1 (62-115)||(49426708-49426761)
chr1 (34-114)||(46217315-46217395)
chr1 (68-140)||(47505916-47505988)
chr1 (66-113)||(2425714-2425761)
chr1 (34-113)||(15047279-15047358)
chr1 (69-140)||(21140995-21141066)
chr1 (1-40)||(26637220-26637259)
chr1 (66-113)||(44596858-44596905)
chr1 (34-160)||(45977695-45977821)
chr1 (59-176)||(14985272-14985389)
chr1 (10-47)||(49426750-49426787)
chr1 (34-110)||(9711648-9711724)
chr1 (37-113)||(52802127-52802203)
chr1 (34-148)||(2365196-2365311)
chr1 (34-113)||(6562158-6562237)
chr1 (1-40)||(36908640-36908679)
chr1 (62-151)||(22397778-22397868)
chr1 (34-115)||(29425333-29425414)
chr1 (95-160)||(46908341-46908406)
chr1 (34-148)||(585616-585727)
chr1 (34-122)||(31783712-31783800)
chr1 (1-49)||(44596896-44596944)
chr1 (1-45)||(51269003-51269047)
chr1 (95-138)||(6328922-6328965)
chr1 (34-112)||(19928808-19928887)
chr1 (34-93)||(20353932-20353991)
chr1 (34-113)||(23359346-23359425)
chr1 (34-93)||(38771646-38771705)
chr1 (36-91)||(44336268-44336323)
chr1 (130-176)||(253027-253073)
chr1 (105-175)||(640987-641057)
chr1 (1-79)||(13147527-13147605)
chr1 (90-152)||(19155972-19156034)
chr1 (130-176)||(20114538-20114584)
chr1 (59-113)||(27485056-27485110)
chr1 (59-160)||(27650016-27650114)
chr1 (53-175)||(51291602-51291723)
chr1 (62-139)||(4208367-4208444)
chr1 (36-113)||(6557912-6557989)
chr1 (62-139)||(12627210-12627287)
chr1 (130-175)||(26944413-26944458)
chr1 (130-175)||(32161386-32161431)
chr1 (58-111)||(42290295-42290348)
chr1 (34-113)||(47653704-47653780)
chr1 (34-87)||(48751407-48751460)
chr1 (1-37)||(4208454-4208490)
chr1 (35-87)||(11183209-11183261)
chr1 (37-113)||(13761044-13761120)
chr1 (36-136)||(15695768-15695868)
chr1 (59-87)||(19495089-19495117)
chr1 (34-113)||(31945858-31945938)
chr1 (95-139)||(49502075-49502119)
[»] chr4 (101 HSPs)
chr4 (189-333)||(45148379-45148526)
chr4 (62-172)||(34530794-34530904)
chr4 (1-87)||(56138275-56138361)
chr4 (1-113)||(1041932-1042044)
chr4 (10-115)||(28081453-28081558)
chr4 (63-152)||(3183939-3184028)
chr4 (34-175)||(28235558-28235699)
chr4 (26-117)||(55793912-55794004)
chr4 (1-83)||(958558-958640)
chr4 (34-148)||(21022885-21022999)
chr4 (63-175)||(3186090-3186202)
chr4 (37-113)||(16983519-16983595)
chr4 (3-83)||(29700268-29700348)
chr4 (34-174)||(56565693-56565833)
chr4 (34-113)||(16984158-16984237)
chr4 (34-148)||(7485658-7485772)
chr4 (1-83)||(44561294-44561376)
chr4 (26-117)||(6178099-6178191)
chr4 (26-117)||(49094076-49094168)
chr4 (34-113)||(18884501-18884580)
chr4 (10-117)||(21017975-21018085)
chr4 (34-113)||(40833607-40833686)
chr4 (53-148)||(51037484-51037579)
chr4 (36-148)||(38368193-38368302)
chr4 (53-115)||(38369198-38369260)
chr4 (53-174)||(16473696-16473817)
chr4 (34-139)||(48806456-48806561)
chr4 (34-175)||(51492006-51492147)
chr4 (1-49)||(34154392-34154440)
chr4 (1-49)||(34530759-34530807)
chr4 (1-49)||(39588127-39588175)
chr4 (37-113)||(39590568-39590644)
chr4 (26-117)||(41795345-41795437)
chr4 (34-122)||(50446996-50447084)
chr4 (34-113)||(14200558-14200637)
chr4 (34-113)||(15995719-15995798)
chr4 (34-113)||(19069184-19069263)
chr4 (34-113)||(46254445-46254524)
chr4 (34-148)||(23220640-23220754)
chr4 (62-140)||(40061186-40061264)
chr4 (37-135)||(44680074-44680172)
chr4 (1-54)||(243309-243362)
chr4 (62-139)||(8111440-8111517)
chr4 (34-139)||(43176625-43176730)
chr4 (39-175)||(49889617-49889753)
chr4 (1-49)||(6283431-6283479)
chr4 (33-113)||(9889991-9890071)
chr4 (34-148)||(23221667-23221778)
chr4 (37-113)||(28083990-28084066)
chr4 (39-139)||(37856746-37856846)
chr4 (34-153)||(39773360-39773480)
chr4 (68-140)||(50020087-50020159)
chr4 (1-49)||(51429293-51429341)
chr4 (1-49)||(56304911-56304959)
chr4 (1-48)||(4786298-4786345)
chr4 (34-160)||(12375938-12376061)
chr4 (36-87)||(48256567-48256618)
chr4 (34-139)||(36480537-36480639)
chr4 (70-140)||(50023580-50023650)
chr4 (70-140)||(50030698-50030768)
chr4 (62-111)||(44674163-44674212)
chr4 (53-148)||(55587320-55587412)
chr4 (53-148)||(55588303-55588395)
chr4 (54-175)||(7484665-7484782)
chr4 (34-113)||(21015736-21015815)
chr4 (36-143)||(28234383-28234490)
chr4 (62-117)||(40354601-40354656)
chr4 (1-49)||(42885510-42885560)
chr4 (34-148)||(49169094-49169209)
chr4 (62-113)||(50274757-50274808)
chr4 (34-148)||(54634012-54634127)
chr4 (62-143)||(31242182-31242264)
chr4 (34-151)||(37563277-37563395)
chr4 (62-175)||(46165680-46165790)
chr4 (62-115)||(3403842-3403895)
chr4 (63-140)||(51494875-51494952)
chr4 (59-175)||(44794994-44795110)
chr4 (34-113)||(15999796-15999875)
chr4 (40-139)||(20208481-20208580)
chr4 (62-148)||(26792269-26792356)
chr4 (34-140)||(26932553-26932660)
chr4 (85-140)||(40061071-40061126)
chr4 (40-139)||(48807389-48807488)
chr4 (36-82)||(17342170-17342216)
chr4 (103-137)||(19682177-19682211)
chr4 (34-143)||(30726738-30726848)
chr4 (34-80)||(34503739-34503785)
chr4 (69-159)||(34528115-34528205)
chr4 (37-82)||(955820-955865)
chr4 (118-175)||(28320493-28320550)
chr4 (34-90)||(33051649-33051706)
chr4 (62-123)||(37855846-37855907)
chr4 (20-49)||(37865203-37865232)
chr4 (63-140)||(50196936-50197013)
chr4 (62-91)||(50278823-50278852)
chr4 (62-139)||(51036474-51036551)
chr4 (37-82)||(51426565-51426610)
chr4 (57-113)||(4768675-4768731)
chr4 (68-140)||(9013900-9013972)
chr4 (34-148)||(14201527-14201638)
chr4 (35-87)||(55407791-55407843)
[»] chr3 (101 HSPs)
chr3 (1-113)||(55385134-55385246)
chr3 (1-175)||(34694398-34694573)
chr3 (1-113)||(24703379-24703491)
chr3 (10-115)||(2271286-2271391)
chr3 (10-115)||(36134318-36134423)
chr3 (10-115)||(4004776-4004881)
chr3 (1-113)||(43476188-43476301)
chr3 (1-113)||(41802995-41803107)
chr3 (34-175)||(42166407-42166548)
chr3 (34-175)||(43478827-43478969)
chr3 (1-113)||(52570530-52570642)
chr3 (34-176)||(4015126-4015268)
chr3 (1-83)||(45101812-45101894)
chr3 (36-137)||(2062359-2062460)
chr3 (34-175)||(8475761-8475902)
chr3 (1-113)||(55207627-55207739)
chr3 (36-139)||(14043897-14044000)
chr3 (53-175)||(4331836-4331958)
chr3 (53-175)||(19988394-19988516)
chr3 (34-148)||(27739564-27739678)
chr3 (34-148)||(34543133-34543247)
chr3 (10-117)||(2647672-2647780)
chr3 (34-148)||(3493550-3493665)
chr3 (34-148)||(3497244-3497359)
chr3 (34-139)||(7941081-7941186)
chr3 (1-78)||(41577107-41577184)
chr3 (4-113)||(49219758-49219867)
chr3 (34-113)||(16484453-16484532)
chr3 (34-113)||(48246409-48246488)
chr3 (1-75)||(51402362-51402436)
chr3 (34-143)||(4008320-4008429)
chr3 (34-175)||(42165098-42165239)
chr3 (3-88)||(49609405-49609490)
chr3 (63-148)||(50998706-50998791)
chr3 (34-110)||(12897824-12897900)
chr3 (1-81)||(13896840-13896920)
chr3 (63-135)||(16611075-16611147)
chr3 (1-49)||(19454315-19454363)
chr3 (63-135)||(22048106-22048178)
chr3 (34-137)||(45076246-45076350)
chr3 (26-117)||(49140836-49140928)
chr3 (1-49)||(51696538-51696586)
chr3 (26-117)||(54389787-54389879)
chr3 (34-113)||(2743395-2743474)
chr3 (62-113)||(4002737-4002788)
chr3 (62-113)||(16647172-16647223)
chr3 (34-113)||(19341591-19341670)
chr3 (34-113)||(28816998-28817077)
chr3 (34-148)||(11249521-11249635)
chr3 (62-140)||(17561729-17561807)
chr3 (1-110)||(41137718-41137817)
chr3 (61-134)||(20350594-20350667)
chr3 (34-122)||(6143659-6143747)
chr3 (26-117)||(34049072-34049164)
chr3 (34-109)||(600541-600616)
chr3 (62-113)||(19750039-19750090)
chr3 (34-88)||(4002502-4002556)
chr3 (1-47)||(7245155-7245201)
chr3 (62-140)||(16861099-16861177)
chr3 (34-175)||(10491962-10492103)
chr3 (34-135)||(32593109-32593210)
chr3 (1-49)||(43568927-43568975)
chr3 (68-175)||(2274947-2275054)
chr3 (36-139)||(11270283-11270386)
chr3 (62-134)||(34542132-34542201)
chr3 (34-135)||(10658798-10658899)
chr3 (1-82)||(46347685-46347766)
chr3 (36-113)||(48250868-48250945)
chr3 (62-117)||(46402374-46402430)
chr3 (36-175)||(47070402-47070542)
chr3 (59-111)||(50216876-50216928)
chr3 (63-175)||(52387719-52387831)
chr3 (62-113)||(596781-596832)
chr3 (62-109)||(2267031-2267078)
chr3 (34-148)||(2645417-2645532)
chr3 (35-113)||(3948725-3948804)
chr3 (34-93)||(3953212-3953271)
chr3 (34-175)||(11248492-11248630)
chr3 (62-113)||(13743290-13743341)
chr3 (34-113)||(13747716-13747794)
chr3 (34-113)||(34691622-34691701)
chr3 (37-140)||(41612338-41612441)
chr3 (34-148)||(41844361-41844476)
chr3 (62-109)||(49265789-49265836)
chr3 (53-115)||(11094107-11094168)
chr3 (37-139)||(34645533-34645635)
chr3 (63-148)||(42900138-42900224)
chr3 (130-176)||(43476124-43476170)
chr3 (34-83)||(10492870-10492919)
chr3 (87-140)||(17568010-17568063)
chr3 (38-115)||(19842499-19842576)
chr3 (34-139)||(24700692-24700797)
chr3 (1-83)||(34648166-34648250)
chr3 (34-148)||(12898687-12898798)
chr3 (37-113)||(19440253-19440329)
chr3 (35-87)||(20918009-20918061)
chr3 (35-87)||(20926971-20927023)
chr3 (61-113)||(23443130-23443182)
chr3 (62-122)||(32743195-32743255)
chr3 (34-122)||(45075334-45075422)
chr3 (93-137)||(48566454-48566498)
[»] chr8 (85 HSPs)
chr8 (34-175)||(22550862-22551003)
chr8 (1-91)||(26451499-26451589)
chr8 (1-113)||(41858087-41858197)
chr8 (34-109)||(39601705-39601780)
chr8 (1-75)||(18441405-18441479)
chr8 (62-143)||(22547436-22547517)
chr8 (68-175)||(20854552-20854659)
chr8 (37-176)||(34366845-34366984)
chr8 (62-177)||(45409804-45409919)
chr8 (33-139)||(40740877-40740983)
chr8 (34-143)||(44933826-44933935)
chr8 (53-148)||(28617530-28617625)
chr8 (34-148)||(2335145-2335259)
chr8 (34-175)||(10749671-10749812)
chr8 (34-123)||(36595943-36596032)
chr8 (16-113)||(42602457-42602554)
chr8 (63-175)||(34371872-34371984)
chr8 (34-113)||(27501597-27501676)
chr8 (34-109)||(38604245-38604320)
chr8 (36-110)||(5533024-5533098)
chr8 (54-139)||(7120871-7120956)
chr8 (34-139)||(43520773-43520878)
chr8 (53-110)||(44841890-44841947)
chr8 (58-139)||(44885686-44885767)
chr8 (1-49)||(3395927-3395975)
chr8 (1-49)||(22547504-22547552)
chr8 (1-49)||(38871834-38871882)
chr8 (68-140)||(39831126-39831198)
chr8 (34-148)||(15030845-15030960)
chr8 (34-113)||(32584049-32584128)
chr8 (34-109)||(41016415-41016490)
chr8 (66-140)||(36127342-36127416)
chr8 (34-139)||(13782206-13782311)
chr8 (62-175)||(41250097-41250210)
chr8 (65-109)||(39939243-39939287)
chr8 (1-49)||(41274653-41274701)
chr8 (53-113)||(43363276-43363336)
chr8 (34-148)||(184549-184664)
chr8 (34-113)||(7121783-7121862)
chr8 (44-139)||(16939351-16939446)
chr8 (66-113)||(34235152-34235199)
chr8 (34-113)||(35962304-35962383)
chr8 (34-88)||(43262443-43262497)
chr8 (34-115)||(546418-546499)
chr8 (95-160)||(3696128-3696193)
chr8 (41-114)||(13783112-13783185)
chr8 (62-139)||(28694049-28694126)
chr8 (4-49)||(37779713-37779758)
chr8 (130-175)||(43262359-43262404)
chr8 (26-117)||(486039-486131)
chr8 (34-148)||(28618436-28618547)
chr8 (34-93)||(7344554-7344613)
chr8 (10-109)||(15033119-15033220)
chr8 (34-93)||(17924280-17924339)
chr8 (68-139)||(31745153-31745224)
chr8 (34-148)||(36677926-36678041)
chr8 (34-112)||(42481558-42481637)
chr8 (128-175)||(44050749-44050796)
chr8 (34-148)||(45066358-45066473)
chr8 (90-148)||(25588-25646)
chr8 (35-113)||(1114740-1114818)
chr8 (59-113)||(1116210-1116264)
chr8 (130-176)||(7577682-7577728)
chr8 (34-139)||(16940273-16940378)
chr8 (37-83)||(18438661-18438707)
chr8 (62-140)||(20859629-20859707)
chr8 (62-175)||(34503087-34503197)
chr8 (90-148)||(42485592-42485650)
chr8 (126-175)||(3641580-3641629)
chr8 (103-160)||(4528220-4528277)
chr8 (95-148)||(5532423-5532476)
chr8 (34-83)||(21406294-21406343)
chr8 (34-83)||(21800786-21800835)
chr8 (34-115)||(34892806-34892887)
chr8 (62-139)||(36345930-36346007)
chr8 (95-140)||(45252006-45252051)
chr8 (62-122)||(3085529-3085589)
chr8 (95-159)||(6268936-6269000)
chr8 (95-143)||(38603280-38603328)
chr8 (61-140)||(39491077-39491156)
chr8 (35-87)||(40077248-40077300)
chr8 (95-139)||(40745339-40745383)
chr8 (59-91)||(41276882-41276914)
chr8 (42-122)||(44727510-44727589)
chr8 (57-113)||(45454403-45454459)
[»] scaffold0199 (2 HSPs)
scaffold0199 (10-115)||(12361-12466)
scaffold0199 (33-140)||(10622-10729)
[»] chr7 (57 HSPs)
chr7 (34-175)||(17834422-17834563)
chr7 (10-115)||(17838645-17838750)
chr7 (34-148)||(17840887-17841001)
chr7 (1-82)||(30355203-30355284)
chr7 (1-91)||(40587680-40587770)
chr7 (1-75)||(41047812-41047886)
chr7 (59-113)||(46738799-46738853)
chr7 (1-49)||(21188390-21188438)
chr7 (34-148)||(7031-7145)
chr7 (1-79)||(36394902-36394980)
chr7 (62-143)||(27657005-27657086)
chr7 (1-85)||(28980136-28980221)
chr7 (34-113)||(12210587-12210666)
chr7 (1-80)||(42682024-42682103)
chr7 (65-143)||(13921292-13921370)
chr7 (37-139)||(38555413-38555515)
chr7 (68-174)||(45256923-45257029)
chr7 (62-148)||(46908498-46908584)
chr7 (62-175)||(45258029-45258142)
chr7 (26-117)||(9367713-9367805)
chr7 (5-49)||(46863312-46863356)
chr7 (34-113)||(8044-8123)
chr7 (37-140)||(5541543-5541646)
chr7 (34-148)||(10098114-10098229)
chr7 (34-113)||(42583057-42583136)
chr7 (62-148)||(10516981-10517067)
chr7 (62-140)||(19804514-19804592)
chr7 (3-49)||(34139932-34139978)
chr7 (63-175)||(26833500-26833609)
chr7 (43-139)||(13644392-13644488)
chr7 (62-143)||(7975634-7975716)
chr7 (35-113)||(9494804-9494882)
chr7 (33-115)||(42499404-42499486)
chr7 (34-122)||(18105360-18105449)
chr7 (62-115)||(34139892-34139945)
chr7 (1-54)||(43686871-43686924)
chr7 (3-44)||(45364186-45364227)
chr7 (78-139)||(47521388-47521449)
chr7 (34-148)||(46907501-46907612)
chr7 (62-113)||(618750-618801)
chr7 (34-109)||(14102345-14102420)
chr7 (34-109)||(14412362-14412437)
chr7 (62-113)||(27453619-27453670)
chr7 (61-140)||(37345127-37345206)
chr7 (34-148)||(41884123-41884238)
chr7 (34-112)||(48407284-48407363)
chr7 (36-82)||(10705276-10705322)
chr7 (95-137)||(12080394-12080436)
chr7 (59-113)||(45361646-45361700)
chr7 (34-139)||(11886882-11886986)
chr7 (34-83)||(29112400-29112449)
chr7 (34-91)||(34738383-34738440)
chr7 (95-139)||(12081251-12081295)
chr7 (62-117)||(20564191-20564247)
chr7 (1-49)||(28115496-28115544)
chr7 (35-83)||(37340329-37340377)
chr7 (1-41)||(48269710-48269750)
[»] chr5 (57 HSPs)
chr5 (1-140)||(542754-542894)
chr5 (10-109)||(11346008-11346107)
chr5 (34-175)||(7762241-7762382)
chr5 (1-82)||(20192381-20192462)
chr5 (1-115)||(18307249-18307363)
chr5 (37-175)||(42912878-42913016)
chr5 (62-175)||(14688-14801)
chr5 (1-139)||(35564232-35564370)
chr5 (62-139)||(11348500-11348577)
chr5 (26-117)||(19037459-19037551)
chr5 (1-81)||(25497540-25497620)
chr5 (30-117)||(30708895-30708983)
chr5 (34-109)||(7757326-7757401)
chr5 (62-113)||(8539541-8539592)
chr5 (1-49)||(42865768-42865816)
chr5 (10-117)||(8018-8128)
chr5 (62-113)||(3891480-3891531)
chr5 (37-140)||(38408467-38408570)
chr5 (62-109)||(43094601-43094648)
chr5 (62-140)||(5200381-5200459)
chr5 (37-139)||(18512652-18512753)
chr5 (62-175)||(30705071-30705185)
chr5 (34-115)||(30192487-30192568)
chr5 (34-139)||(35671053-35671158)
chr5 (95-175)||(8680301-8680381)
chr5 (59-139)||(18512202-18512282)
chr5 (34-148)||(13837685-13837800)
chr5 (39-113)||(5773-5847)
chr5 (90-175)||(27673706-27673791)
chr5 (34-115)||(34122519-34122600)
chr5 (65-109)||(43094009-43094053)
chr5 (9-80)||(3600367-3600438)
chr5 (89-139)||(510993-511043)
chr5 (129-175)||(11699259-11699305)
chr5 (65-117)||(8576972-8577025)
chr5 (34-115)||(25877617-25877697)
chr5 (63-140)||(38971649-38971726)
chr5 (30-113)||(28880318-28880402)
chr5 (10-49)||(8537226-8537265)
chr5 (36-83)||(18538334-18538381)
chr5 (62-113)||(20744018-20744069)
chr5 (34-113)||(41798815-41798894)
chr5 (63-113)||(1397376-1397426)
chr5 (41-115)||(41623052-41623126)
chr5 (63-113)||(42937189-42937239)
chr5 (130-175)||(2532595-2532640)
chr5 (34-148)||(19041114-19041229)
chr5 (62-91)||(30887385-30887414)
chr5 (35-88)||(34123933-34123986)
chr5 (62-111)||(42942476-42942525)
chr5 (53-143)||(3892456-3892543)
chr5 (96-140)||(5197014-5197058)
chr5 (37-113)||(28388519-28388595)
chr5 (34-113)||(38855708-38855788)
chr5 (35-87)||(38968118-38968170)
chr5 (95-139)||(40788784-40788828)
chr5 (34-82)||(40789204-40789252)
[»] chr2 (75 HSPs)
chr2 (34-175)||(7189948-7190089)
chr2 (1-87)||(41500198-41500284)
chr2 (34-175)||(3943189-3943330)
chr2 (37-176)||(28419341-28419480)
chr2 (1-80)||(24512197-24512276)
chr2 (53-148)||(30803034-30803129)
chr2 (26-115)||(17424126-17424216)
chr2 (34-176)||(23347325-23347467)
chr2 (1-79)||(29093792-29093870)
chr2 (53-175)||(41273264-41273386)
chr2 (62-175)||(20951071-20951184)
chr2 (34-115)||(23346775-23346856)
chr2 (1-49)||(2920480-2920528)
chr2 (63-143)||(3086003-3086083)
chr2 (1-117)||(34638134-34638246)
chr2 (34-139)||(10425816-10425921)
chr2 (53-113)||(36510872-36510932)
chr2 (1-101)||(39393046-39393146)
chr2 (34-109)||(28477064-28477139)
chr2 (37-140)||(29401605-29401708)
chr2 (1-83)||(10365756-10365838)
chr2 (34-148)||(10424801-10424915)
chr2 (62-175)||(7184990-7185103)
chr2 (34-139)||(33222587-33222692)
chr2 (62-139)||(43976823-43976900)
chr2 (26-117)||(3937841-3937933)
chr2 (68-140)||(36652876-36652948)
chr2 (34-122)||(43258730-43258818)
chr2 (53-113)||(43870137-43870197)
chr2 (26-117)||(43982191-43982283)
chr2 (34-113)||(29947764-29947843)
chr2 (1-48)||(40679561-40679608)
chr2 (1-75)||(2648152-2648226)
chr2 (65-143)||(29074031-29074109)
chr2 (37-115)||(29406967-29407045)
chr2 (1-83)||(43491136-43491218)
chr2 (34-91)||(29397929-29397986)
chr2 (95-175)||(2528607-2528687)
chr2 (36-148)||(39489145-39489257)
chr2 (34-148)||(20937859-20937974)
chr2 (34-148)||(22003398-22003513)
chr2 (34-113)||(27276371-27276450)
chr2 (62-148)||(43619167-43619254)
chr2 (62-140)||(6637504-6637582)
chr2 (85-139)||(29601193-29601247)
chr2 (36-113)||(10825215-10825292)
chr2 (34-139)||(16544342-16544447)
chr2 (34-115)||(39947594-39947675)
chr2 (34-83)||(41004555-41004604)
chr2 (62-110)||(24607593-24607641)
chr2 (34-122)||(29407884-29407972)
chr2 (36-175)||(34639313-34639453)
chr2 (62-122)||(43257738-43257798)
chr2 (34-113)||(3795334-3795413)
chr2 (62-113)||(3803568-3803619)
chr2 (34-148)||(17420529-17420644)
chr2 (34-112)||(17426362-17426441)
chr2 (1-48)||(26858175-26858222)
chr2 (62-113)||(38945759-38945810)
chr2 (34-109)||(40156400-40156475)
chr2 (63-175)||(15488172-15488281)
chr2 (34-108)||(28138582-28138656)
chr2 (62-175)||(39211587-39211697)
chr2 (90-148)||(39793924-39793982)
chr2 (90-148)||(39800706-39800764)
chr2 (62-139)||(14002490-14002567)
chr2 (34-83)||(25184827-25184876)
chr2 (95-140)||(33002364-33002409)
chr2 (130-175)||(43870215-43870260)
chr2 (34-113)||(213449-213529)
chr2 (62-122)||(12252507-12252567)
chr2 (34-113)||(18003269-18003349)
chr2 (66-117)||(28472105-28472157)
chr2 (126-174)||(29093923-29093971)
chr2 (34-148)||(39489963-39490074)
[»] chr6 (50 HSPs)
chr6 (37-156)||(29097828-29097948)
chr6 (1-83)||(12783921-12784003)
chr6 (34-175)||(14012372-14012513)
chr6 (34-115)||(29076320-29076401)
chr6 (34-115)||(29109853-29109934)
chr6 (34-115)||(29111293-29111374)
chr6 (26-117)||(6204819-6204911)
chr6 (26-117)||(22305100-22305192)
chr6 (34-158)||(26351093-26351217)
chr6 (34-175)||(11840247-11840389)
chr6 (260-329)||(8983493-8983562)
chr6 (34-115)||(9048070-9048151)
chr6 (53-113)||(2109514-2109574)
chr6 (26-117)||(11691786-11691878)
chr6 (36-115)||(15888799-15888878)
chr6 (34-157)||(26349928-26350050)
chr6 (62-176)||(3501085-3501199)
chr6 (29-115)||(9049076-9049162)
chr6 (34-178)||(6760869-6761013)
chr6 (34-141)||(17597521-17597629)
chr6 (65-113)||(25554702-25554750)
chr6 (1-49)||(29061331-29061379)
chr6 (34-148)||(28249846-28249961)
chr6 (1-47)||(29065791-29065837)
chr6 (1-47)||(29074804-29074850)
chr6 (1-47)||(29079568-29079614)
chr6 (1-47)||(29107377-29107423)
chr6 (3-49)||(32034358-32034404)
chr6 (34-139)||(32223510-32223615)
chr6 (1-49)||(13401547-13401595)
chr6 (34-148)||(13382590-13382705)
chr6 (70-140)||(24719911-24719981)
chr6 (34-113)||(31768750-31768829)
chr6 (37-148)||(18351643-18351755)
chr6 (34-110)||(31146373-31146449)
chr6 (65-113)||(31151066-31151114)
chr6 (1-76)||(26855929-26856004)
chr6 (62-176)||(29061229-29061344)
chr6 (37-111)||(19757271-19757345)
chr6 (126-175)||(7361125-7361174)
chr6 (130-175)||(11687986-11688031)
chr6 (68-113)||(29065737-29065782)
chr6 (68-113)||(29074750-29074795)
chr6 (68-113)||(29079514-29079559)
chr6 (68-113)||(29107323-29107368)
chr6 (62-91)||(31771766-31771795)
chr6 (34-82)||(8193206-8193254)
chr6 (34-82)||(11157738-11157786)
chr6 (34-149)||(26712008-26712124)
chr6 (62-110)||(28362756-28362804)
[»] scaffold0101 (2 HSPs)
scaffold0101 (26-117)||(36523-36615)
scaffold0101 (34-93)||(41019-41078)
[»] scaffold0180 (1 HSPs)
scaffold0180 (36-143)||(15621-15728)
[»] scaffold0283 (1 HSPs)
scaffold0283 (58-139)||(1634-1715)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-78)||(18863-18940)
[»] scaffold0038 (1 HSPs)
scaffold0038 (34-148)||(50008-50123)
[»] scaffold0176 (2 HSPs)
scaffold0176 (3-49)||(857-903)
scaffold0176 (62-115)||(817-870)
[»] scaffold0504 (1 HSPs)
scaffold0504 (34-143)||(12349-12458)
[»] scaffold1379 (1 HSPs)
scaffold1379 (34-113)||(431-510)
[»] scaffold0341 (1 HSPs)
scaffold0341 (34-113)||(17348-17427)
[»] scaffold0184 (1 HSPs)
scaffold0184 (36-115)||(18292-18371)
[»] scaffold0078 (1 HSPs)
scaffold0078 (36-115)||(54473-54552)
[»] scaffold0016 (1 HSPs)
scaffold0016 (34-113)||(69218-69297)
[»] scaffold0494 (2 HSPs)
scaffold0494 (90-148)||(11507-11565)
scaffold0494 (34-113)||(5327-5407)
[»] scaffold0011 (1 HSPs)
scaffold0011 (62-152)||(236285-236375)
[»] scaffold0268 (1 HSPs)
scaffold0268 (65-113)||(15441-15489)
[»] scaffold0065 (1 HSPs)
scaffold0065 (34-114)||(65314-65394)
[»] scaffold0116 (1 HSPs)
scaffold0116 (34-113)||(15952-16031)
[»] scaffold0219 (1 HSPs)
scaffold0219 (126-175)||(20203-20252)
[»] scaffold0169 (1 HSPs)
scaffold0169 (126-175)||(1735-1784)
[»] scaffold0388 (1 HSPs)
scaffold0388 (34-82)||(13906-13954)
[»] scaffold0019 (1 HSPs)
scaffold0019 (53-140)||(134330-134414)


Alignment Details
Target: chr1 (Bit Score: 113; Significance: 4e-57; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 189 - 351
Target Start/End: Complemental strand, 46267660 - 46267494
Alignment:
Q  189 ctgcatacatatattggt---tttctaaattatctttcttttttctttgctcatcggatttacttgaaa-gacaaggagagaaaaacctaatttcaacta 284  Q
    ||||||||||| ||||||   |||||||||||||||||||||||||||||||||| |||||| |||||| || | |||||||||||||| ||||||||||    
T  46267660 ctgcatacatagattggtaaatttctaaattatctttcttttttctttgctcatcagatttatttgaaaagagagggagagaaaaaccttatttcaacta 46267561  T
Q  285 acatgcaagagttcaaaacaatataatttatcatgattaaattgtgatcctgaaatggtgtggaact 351  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  46267560 acacgcaagagttcaaaacaaaataatttatcatgattaaattgtgatcctgaaatggtgtggaact 46267494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 19161968 - 19161888
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaa 114  Q
    |||||||||||||||||| || || || |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19161968 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaa 19161888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 49395712 - 49395574
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | || | |   || ||||||||||||||||||| | | | ||| ||||||    
T  49395712 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggaaaacctaggcagttaactgcagccggttctttcaaaattcggc 49395613  T
Q  101 atttaactgccgaagaacatttagataaattactcgtgt 139  Q
      |||||| ||||||   |||| || |||||||||||||    
T  49395612 tattaactaccgaagggtatttggacaaattactcgtgt 49395574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 22524200 - 22524076
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactc 135  Q
    |||||||||||||| | || || || ||||| |||||||||| ||||| || |||||||||||||| ||||||| ||| |  ||||||| ||||||||||    
T  22524200 ctcggcagttaactaccgaggttttcctcgggagttaactgccgccggtttactaaaacttcggcacttaactgtcgaggggcatttaggtaaattactc 22524101  T
Q  136 gtgtggcaaagccttatgcaatgtg 160  Q
    |||||||| | ||||||| ||||||    
T  22524100 gtgtggcacaaccttatgaaatgtg 22524076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 586602 - 586716
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| |||||||||||||||||| |||||||||||||   ||||   ||| ||||    
T  586602 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttac 586701  T
Q  134 tcgtgtggcaaagcc 148  Q
    |||||||||| ||||    
T  586702 tcgtgtggcacagcc 586716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 42572721 - 42572803
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | || | |   |||| |||||||||||||||||    
T  42572721 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggaaaacctcgacagttaactgcagccgg 42572803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 18609892 - 18610033
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| | ||||| || ||||| |||||||||| ||||| || |||||||||||||| ||||||||| |||  || |||| |||| ||     
T  18609892 tcctcggcagttaactgccgaagttttcctcggtagttaactgccgccggtttactaaaacttcggcagttaactgccaaagggcaattaggtaaaatat 18609991  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    ||||||| || ||||||||  ||||||  |||| ||||||||    
T  18609992 tcgtgtgacacagccttatcaaatgtgtaaacaacaattctc 18610033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 13636111 - 13636203
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaa 117  Q
    |||| ||||||||||||||||||| | || || || |||||||||||||||||||||||||| | |||| ||||||| |||||||||||||||    
T  13636111 gcaggagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaagaa 13636203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 19159707 - 19159615
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaa 117  Q
    |||||||||||||||||||||||| | || || || || ||||||||||||||||||||||| | |||| ||||||| |||||||||||||||    
T  19159707 gcagaagatcctcggcagttaactaccgaggttttccttggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaagaa 19159615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27487630 - 27487678
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27487630 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 27487678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29763183 - 29763231
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29763183 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 29763231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 48228328 - 48228404
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||   ||| ||||||||||    
T  48228328 tcggcagttaactgcagccagatttctaaaacttcggcagttaactgccgaaggacatttgagtaatttactcgtgt 48228404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 174
Target Start/End: Original strand, 97949 - 98060
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtgag 162  Q
    ||||||||||||||| ||||  || |||||||||||||| |||||||  ||||| ||||||| |||| ||||||||||||| ||||||||  ||||||      
T  97949 tcggcagttaactgccgccgatttactaaaacttcggcagttaactgttgaagagcatttaggtaaaatactcgtgtggcacagccttatcaaatgtgta 98048  T
Q  163 aacatcaattct 174  Q
    |||| |||||||    
T  98049 aacaacaattct 98060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 44598903 - 44598982
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||||||| |||||| |||| ||  ||||||||||    
T  44598903 tcctcggcagttaactcccgaagttttcctcggcagttaactgcagccggattactaaaatttcgacaggtaactgccga 44598982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 50343968 - 50344067
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcg 136  Q
    ||||||||||||| |||| | | |  |||| |||||||||| ||||| ||||||||||||||||| ||||||||||| || ||||||| |||||||||||    
T  50343968 tcggcagttaactgctgaggaaatcttcgggagttaactgccgccggttttctaaaacttcggcagttaactgccgatgagcatttaggtaaattactcg 50344067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 9618794 - 9618656
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || ||||| ||||||||||||||||  ||| | || ||||||| ||||||||| | |||||||| | ||||||||    
T  9618794 tcctcgggagtttactgccgaagttttcctcggtagttaactgcagccgg--ttccataa-ttcggcagttaactgccaaggaacatttcggtaaattac 9618698  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    ||||||| || ||||||||||||||||  |||| ||||||||    
T  9618697 tcgtgtgacacagccttatgcaatgtgtcaacaacaattctc 9618656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 30194478 - 30194416
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    ||||| || ||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  30194478 gaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaag 30194416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 9710654 - 9710597
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaa 91  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||    
T  9710654 tcctcggcagttaactcccgaagttttcctcggcagttaactgcagccggatttctaa 9710597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 29424456 - 29424375
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    |||||||||||||||| | ||||| || ||||| |||||||||||||||| ||| | ||||||||||| |||||||||||||    
T  29424456 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttttttaaacttcggcaattaactgccgaag 29424375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 49429160 - 49429237
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||||||||||| |||||   ||| ||||||||||    
T  49429160 ctcggcaactaactgcagccggatttctaaaacttcggcagttaactgccgaagagcatttgagtaatttactcgtgt 49429237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 49927465 - 49927514
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactc 50  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49927465 tgagagagcttctgccagatttgtagcagaagatcctcggtagttaactc 49927514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13972171 - 13972091
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagcc 81  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| | | | || || || |||||| |||||||||||||    
T  13972171 tgagagagcttctgccagatttgtagcagaagatcctcggctgtttaataccgaggttttcctcggctgttaactgcagcc 13972091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14174875 - 14174923
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14174875 tgagagagcttctgccagatttttagcagaagatcctcggcagttaact 14174923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 49661758 - 49661838
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggc 142  Q
    ||||||||||||||||||||| ||||||||||||||| || |||| | |||| ||||||||  |||| |||||||||||||    
T  49661758 ctcggcagttaactgcagccgtatttctaaaacttcgacaattaattaccgaggaacatttgaataatttactcgtgtggc 49661838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 4883309 - 4883234
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| |||||||||||||||||| |||||||    
T  4883309 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactg 4883234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 53 - 148
Target Start/End: Complemental strand, 19914523 - 19914428
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    ||||| || ||||||||||||||||||||| |||||||||||||||| | ||||||||||| |  |||||   ||| |||||||||||||| ||||    
T  19914523 gaagttttcctcggcagttaactgcagccgtatttctaaaacttcggaagttaactgccgaggggcatttgagtaatttactcgtgtggcacagcc 19914428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 29765554 - 29765605
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  29765554 ctcggcagttaactgcaaccggatttctaaaacttcggcagttaactgccga 29765605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 44470008 - 44470087
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||||| || || || ||||||||||||||||||||||||||| ||  | |||||| |||||||||||    
T  44470008 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 44470087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 46886385 - 46886463
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | || || || ||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  46886385 tcctcggcagttaactaccga-gttttcctcggcacttaactacagccggatttctaaaacttcggcagttaactgccga 46886463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 51271592 - 51271667
Alignment:
Q  38 cggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||  | || || || ||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  51271592 cggcagttaaccaccgaggttttcctcggcaattaactgcagccggatttctaaaacttcggcagttaactgccga 51271667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 94457 - 94404
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    ||||| ||||||||||||| |||||||||||||||||||| |||||||||||||    
T  94457 ctcggtagttaactgcagctggatttctaaaacttcggcagttaactgccgaag 94404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6434857 - 6434776
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccg 82  Q
    |||||| |||||| ||||||||||||||||||||||| ||||||||||| | ||||| || ||  |||| ||||||||||||    
T  6434857 tgagagtgcttctaccagatttgtagcagaagatccttggcagttaactaccgaagttttccttagcagataactgcagccg 6434776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 49426761 - 49426708
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    |||||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  49426761 ctcggcagttaattgcagccggatttctaaaacttcggcggttaactgccgaag 49426708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 46217315 - 46217395
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaa 114  Q
    |||||||||||||||| | ||||| || ||||| |||||||||||||||  ||| | ||||||||||| ||||||||||||    
T  46217315 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccgattttttcaaacttcggcaattaactgccgaa 46217395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 47505916 - 47505988
Alignment:
Q  68 agttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    |||||||||||||||  ||||||||||||||||| |||||||||||    |||||||||||||||||| ||||    
T  47505916 agttaactgcagccgattttctaaaacttcggcaattaactgccgagaggcatttagataaattactcttgtg 47505988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 2425714 - 2425761
Alignment:
Q  66 gcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  2425714 gcagttaactgcagccggatttccaaaacttcggcagttaactgccga 2425761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 15047358 - 15047279
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | || | ||| ||||||||||||||||||||||||||| ||  | |||||| |||||||||||    
T  15047358 tcctcggcagttaactaccgaggaattcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 15047279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 21141066 - 21140995
Alignment:
Q  69 gttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    ||||||||| | ||| ||||||||||||||||| |||| || ||||| |||||||| |||||||||||||||    
T  21141066 gttaactgccgtcggttttctaaaacttcggcagttaattgtcgaaggacatttaggtaaattactcgtgtg 21140995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 26637220 - 26637259
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26637220 tgagagagcttctgccagatttgtagcagaagatcctcgg 26637259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 44596905 - 44596858
Alignment:
Q  66 gcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  44596905 gcagttaactgcaaccggatttctaaaacttcggcagttaactgccga 44596858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 45977695 - 45977821
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||| ||||||||||   ||||| || |||||||||| |||   ||||| || |||||||||||||| ||||||||||||  ||||||   |||| |||    
T  45977695 tcctctgcagttaactatcgaagttttcctcggcagtttactttcgccggtttactaaaacttcggcagttaactgccgaatgacattttcgtaaagtac 45977794  T
Q  134 tcgtgtggcaaagccttatgcaatgtg 160  Q
    |||| ||||| ||||||||| ||||||    
T  45977795 tcgtatggcacagccttatgtaatgtg 45977821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 176
Target Start/End: Complemental strand, 14985389 - 14985272
Alignment:
Q  59 tttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatg 158  Q
    |||||||| |||||||||| ||||  || |||||||||||||| ||||||| |||||  |||||   |||| |||| ||||| || ||||||||| ||||    
T  14985389 tttctcggtagttaactgccgccgatttactaaaacttcggcagttaactgtcgaagggcattttcgtaaagtactagtgtgacacagccttatgtaatg 14985290  T
Q  159 tgagaacatcaattctcc 176  Q
    ||  |||| |||||||||    
T  14985289 tgtaaacagcaattctcc 14985272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 49426787 - 49426750
Alignment:
Q  10 ttctgccagatttgtagcagaagatcctcggcagttaa 47  Q
    ||||||||||||||||||||||||||||||||||||||    
T  49426787 ttctgccagatttgtagcagaagatcctcggcagttaa 49426750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 9711648 - 9711724
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgc 110  Q
    |||||||||||||||||| || || || ||||||||||||||||  ||||||||||||  | |||||| ||||||||    
T  9711648 tcctcggcagttaactcccgaggttttcctcggcagttaactgcgaccggatttctaattcctcggcagttaactgc 9711724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 52802203 - 52802127
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||| | || || || ||||||||||||||||||||||||||| ||  | |||||| |||||||||||    
T  52802203 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 52802127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 2365311 - 2365196
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaa-cttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| |  | | ||| ||||| ||||| |||| ||||| || |||||| |||||||| |||||||||||||  ||||||| | | |||    
T  2365311 tcctcggcagttaactgccaaggaattcctcggtagttagctgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttaggtcattta 2365212  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  2365211 ctcgtgtggcacagcc 2365196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 6562158 - 6562237
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | || |  || ||||||||||||||||||||||||||| ||  | |||||| |||||||||||    
T  6562158 tcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 6562237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 36908679 - 36908640
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcgg 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  36908679 tgagagagcttctgccagatttgtagcagaagctcctcgg 36908640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 22397868 - 22397778
Alignment:
Q  62 ctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcctta 151  Q
    |||||||||||||||| ||||| || || |||||||||||| |||||||||||||   |||| | ||  |||||||||||||| |||||||    
T  22397868 ctcggcagttaactgccgccggtttactcaaaacttcggcagttaactgccgaagggtattttggtattttactcgtgtggcacagcctta 22397778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 29425333 - 29425414
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    |||||||||||||||| | ||||| || ||||| ||||||||||| |||  ||| | |||||||| || |||||||||||||    
T  29425333 tcctcggcagttaactaccgaagttttcctcggtagttaactgcaaccgattttttcaaacttcgacagttaactgccgaag 29425414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 46908406 - 46908341
Alignment:
Q  95 ttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtg 160  Q
    ||||||| ||||||||||| || ||||| | ||||||||||||| | || ||||||||||||||||    
T  46908406 ttcggcaattaactgccgatgagcatttcggtaaattactcgtgcgacacagccttatgcaatgtg 46908341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 585727 - 585616
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || |||||||||||||||||||||| ||  |||   ||||||| |||| ||||||||  ||||| | ||||||||    
T  585727 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaattgccgaagggcatttgggtaaattac 585631  T
Q  134 tcgtgtggcaaagcc 148  Q
    || ||||||| ||||    
T  585630 tcctgtggcatagcc 585616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 31783712 - 31783800
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacattt 122  Q
    |||||||||||||||||| || || || |||||||||||||| | |||   || ||||||||||| || ||||||| ||||| ||||||    
T  31783712 tcctcggcagttaactcccgaggttttcctcggcagttaactaccgccaatttactaaaacttcgacagttaactgtcgaaggacattt 31783800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44596944 - 44596896
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||| |||||||| |||||||||||||||| ||| ||||||||||    
T  44596944 tgagagagtttctgccaaatttgtagcagaagatactcagcagttaact 44596896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 51269047 - 51269003
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagtt 45  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||    
T  51269047 tgagagagcttctgctaaatttgtagcagaagatcctcggtagtt 51269003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 6328922 - 6328965
Alignment:
Q  95 ttcggcatttaactgccgaagaacatttagataaattactcgtg 138  Q
    ||||||| |||||||||||  |||||||||||||||||||||||    
T  6328922 ttcggcagttaactgccgagaaacatttagataaattactcgtg 6328965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 19928808 - 19928887
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccg 112  Q
    |||||||||||||||| | || || || ||||||| |||||||| ||||| || || |||||||||||| ||||||||||    
T  19928808 tcctcggcagttaactaccgaggttttactcggcacttaactgccgccggcttcctaaaaacttcggcagttaactgccg 19928887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 20353932 - 20353991
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaa 93  Q
    |||||||||||||||| | ||||| || |||||||||||||||| ||||| || ||||||    
T  20353932 tcctcggcagttaactaccgaagttttcctcggcagttaactgccgccggtttcctaaaa 20353991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 23359346 - 23359425
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||| ||| | || || || ||||| ||||||||||||||||||||| ||  | |||||| |||||||||||    
T  23359346 tcctcggcagtttactaccgaggttttcctcggtagttaactgcagccggatttcaaattcctcggcaattaactgccga 23359425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 38771705 - 38771646
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaa 93  Q
    |||||||||||||||||| || || || |||||||||||||||| ||||| || ||||||    
T  38771705 tcctcggcagttaactcccgaggttttcctcggcagttaactgccgccggtttcctaaaa 38771646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 44336323 - 44336268
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaa 91  Q
    |||||||||||||| | || || || ||||||||||||||||||||| ||||||||    
T  44336323 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccgaatttctaa 44336268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 253073 - 253027
Alignment:
Q  130 ttactcgtgtggcaaagccttatgcaatgtgagaacatcaattctcc 176  Q
    |||||||||||||| ||||||||| |||||| ||||| |||||||||    
T  253073 ttactcgtgtggcacagccttatgtaatgtgggaacagcaattctcc 253027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 641057 - 640987
Alignment:
Q  105 aactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    ||||||||| || ||||| | ||||||||| ||||| || ||||||||||||||||  |||| ||||||||    
T  641057 aactgccgatgagcatttcggtaaattactagtgtgacacagccttatgcaatgtgtcaacaacaattctc 640987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13147605 - 13147527
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcag 79  Q
    |||||||| || | ||||||||||||||||||||| ||| |||||||||   || || || ||||| ||||||||||||    
T  13147605 tgagagagtttttaccagatttgtagcagaagatcatcgacagttaactgtcgaggttttcctcggtagttaactgcag 13147527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 19156034 - 19155972
Alignment:
Q  90 aaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttat 152  Q
    ||||||||  || |||||| ||||||| ||||||| ||||| |||||||||||| ||||||||    
T  19156034 aaaacttcaacagttaactaccgaagagcatttaggtaaatgactcgtgtggcacagccttat 19155972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 20114584 - 20114538
Alignment:
Q  130 ttactcgtgtggcaaagccttatgcaatgtgagaacatcaattctcc 176  Q
    |||||||||||||| ||||||||| |||||| ||||| |||||||||    
T  20114584 ttactcgtgtggcacagccttatgtaatgtgggaacaacaattctcc 20114538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 27485110 - 27485056
Alignment:
Q  59 tttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||||||||||| |||  | | |||| |||||||||||    
T  27485110 tttctcggcagttaactgcagccggatttttaattcctaggcagttaactgccga 27485056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 27650016 - 27650114
Alignment:
Q  59 tttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatg 158  Q
    |||||||| ||||||||||||| ||  ||| | || ||||||| ||||||||||| |  ||||| | ||||||||| ||||| || ||||||||||||||    
T  27650016 tttctcggtagttaactgcagctgg--ttccataa-ttcggcagttaactgccgaggggcatttcggtaaattactagtgtgacacagccttatgcaatg 27650112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 51291602 - 51291723
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttat 152  Q
    ||||| || ||||| ||||||||||||||| ||| |  | | ||||||| |||||||||||    |||||  |||||||||||||||| || || |||||    
T  51291602 gaagttttcctcggtagttaactgcagccg-attccatataattcggcaattaactgccgagaggcatttcaataaattactcgtgtgacatagtcttat 51291700  T
Q  153 gcaatgtgagaacatcaattctc 175  Q
    ||||||||  |||| ||||||||    
T  51291701 gcaatgtgtcaacaacaattctc 51291723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 4208444 - 4208367
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    |||||||||||||||||||||| |   | ||| ||||||| ||||||||||||| | ||||   ||||||||||||||    
T  4208444 ctcggcagttaactgcagccggttccttcaaaattcggcagttaactgccgaaggatatttgagtaaattactcgtgt 4208367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 6557989 - 6557912
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||| | ||  | || ||||||||||||||||||||| ||||| ||  | |||||| |||||||||||    
T  6557989 ctcggcagttaactaccgagattttcctcggcagttaactgcagccgaatttcaaattcctcggcagttaactgccga 6557912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 12627287 - 12627210
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    ||||||||||||||||| |||| | | ||||| ||||||| |||||| ||||||   |||| | ||||||||||||||    
T  12627287 ctcggcagttaactgcacccggttctttaaaatttcggcaattaactaccgaagggtatttgggtaaattactcgtgt 12627210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 26944458 - 26944413
Alignment:
Q  130 ttactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||||||| ||||||||| |||||| ||||| ||||||||    
T  26944458 ttactcgtgtggcacagccttatgtaatgtgggaacaacaattctc 26944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 32161386 - 32161431
Alignment:
Q  130 ttactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||||||| ||||||||| |||||| ||||| ||||||||    
T  32161386 ttactcgtgtggcacagccttatgtaatgtgggaacaacaattctc 32161431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 42290348 - 42290295
Alignment:
Q  58 atttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgcc 111  Q
    |||||||| ||||||||||||||||  ||| ||||| ||||||| |||||||||    
T  42290348 atttctcgacagttaactgcagccgattttttaaaatttcggcagttaactgcc 42290295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 47653704 - 47653780
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||| |||| ||| | ||||| || |||||||||||||||||||||| ||| |||   ||||||| |||||||||||    
T  47653704 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggttttataa---ttcggcagttaactgccga 47653780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 48751407 - 48751460
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt 87  Q
    |||||||||||||||| | || || || ||||||| ||||||||||||||||||    
T  48751407 tcctcggcagttaactaccgaggttttcctcggcaattaactgcagccggattt 48751460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4208490 - 4208454
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcct 37  Q
    ||||||||||||||  |||||||||||||||||||||    
T  4208490 tgagagagcttctggtagatttgtagcagaagatcct 4208454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 11183261 - 11183209
Alignment:
Q  35 cctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt 87  Q
    ||||| ||||||||| | || || || ||||||||||||||||||||||||||    
T  11183261 cctcgacagttaactaccgaggttttcctcggcagttaactgcagccggattt 11183209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 13761044 - 13761120
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||   ||||| || |||||||||||||||||||||| | | ||||| |  |||| |||||||||||    
T  13761044 tcggcagttaactgtcgaagttttcctcggcagttaactgcagccggttctttaaaattgaggcagttaactgccga 13761120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 15695868 - 15695768
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactc 135  Q
    |||||||||||||| | ||||| || |||| ||||||| | |||| |  ||||||||||||| ||  |||||||| |||||  |||| | ||||||||||    
T  15695868 ctcggcagttaactgccgaagttttcctcgacagttaattacagctgattttctaaaacttcagcggttaactgcagaagagaatttgggtaaattactc 15695769  T
Q  136 g 136  Q
    |    
T  15695768 g 15695768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 19495117 - 19495089
Alignment:
Q  59 tttctcggcagttaactgcagccggattt 87  Q
    |||||||||||||||||||||||||||||    
T  19495117 tttctcggcagttaactgcagccggattt 19495089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 31945858 - 31945938
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | || | ||| ||||| |||||||||| ||||| || || ||||| |||||| |||||||||||    
T  31945858 tcctcggcagttaactaccgaggaattcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccga 31945938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 49502119 - 49502075
Alignment:
Q  95 ttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    ||||||| ||||||||||| || ||||||| ||||||||||||||    
T  49502119 ttcggcagttaactgccgaggagcatttaggtaaattactcgtgt 49502075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 9e-49; HSPs: 101)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 189 - 333
Target Start/End: Original strand, 45148379 - 45148526
Alignment:
Q  189 ctgcatacatatattggt---tttctaaattatctttcttttttctttgctcatcggatttacttgaaa-gacaaggagagaaaaacctaatttcaacta 284  Q
    ||||||||||| ||||||   |||||||||||||||||||||||||| | |||||||||||| |||||| || | |||||||||||||||||||||||||    
T  45148379 ctgcatacatagattggtaaatttctaaattatctttcttttttctt-gttcatcggatttatttgaaaagagagggagagaaaaacctaatttcaacta 45148477  T
Q  285 acatgcaagagttcaaaacaatataatttatcatgattaaattgtgatc 333  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45148478 acatgcaagagttcaaaacaatataatttatcatgattaaattgtgatc 45148526  T

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Target: chr4; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 34530794 - 34530904
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtga 161  Q
    |||||||||||||||||||| |||||||||||||||| || ||||||||||||| |||||||| ||||||| |||||||||  ||||||||||||||||     
T  34530794 ctcggcagttaactgcagccagatttctaaaacttcgacagttaactgccgaaggacatttaggtaaattattcgtgtggcccagccttatgcaatgtgg 34530893  T
Q  162 gaacatcaatt 172  Q
    ||||| |||||    
T  34530894 gaacaacaatt 34530904  T

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Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 56138361 - 56138275
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| || || ||||||||||||||||||||||||||    
T  56138361 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactactgaggttttcctcggcagttaactgcagccggattt 56138275  T

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Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 1042044 - 1041932
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggc 100  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||| | ||  | ||||||||||||||||||||| |||||||||||  | |||||    
T  1042044 tgagagagcttatgccagatttgtagtagaagatcctcggcagttaactaccgagatttttctcggcagttaactgcagtcggatttctaattcctcggc 1041945  T
Q  101 atttaactgccga 113  Q
    | |||||||||||    
T  1041944 agttaactgccga 1041932  T

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Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 28081558 - 28081453
Alignment:
Q  10 ttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    |||||||||||||||||||||||||||||| || ||||||   ||  | || |||||||||||||||||| ||||||||||||||||||||| |||||||    
T  28081558 ttctgccagatttgtagcagaagatcctcgacacttaactaacgagattttcctcggcagttaactgcagtcggatttctaaaacttcggcagttaactg 28081459  T
Q  110 ccgaag 115  Q
    ||||||    
T  28081458 ccgaag 28081453  T

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Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 3184028 - 3183939
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttat 152  Q
    ||||||||||||||| ||||| || |||||||||||||| ||||||| ||||| ||||||||||||| ||||||||||||| ||||||||    
T  3184028 tcggcagttaactgccgccggtttactaaaacttcggcagttaactgtcgaaggacatttagataaaatactcgtgtggcacagccttat 3183939  T

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Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 28235558 - 28235699
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||||||| | ||||| || |||||||||||||||| ||||| || |||||||||||||| |||||||||||||  |||||   |||| |||    
T  28235558 tcctcgggagttaactgcagaagttttcctcggcagttaactgccgccggtttactaaaacttcggcagttaactgccgaagggcattttcgtaaaatac 28235657  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||| | ||||||||| ||||||  |||| ||||||||    
T  28235658 tcgtgtggtacagccttatgtaatgtgtaaacaacaattctc 28235699  T

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Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 55794004 - 55793912
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaa 117  Q
    |||||||||||||||||||||||||| || || || |||||||||||||||||||||||||| | |||| ||||||| |||||||||||||||    
T  55794004 gcagaagatcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaagaa 55793912  T

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Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 958558 - 958640
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| | || || || ||||||||||||||||| ||||    
T  958558 tgagagagcttctgccggatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcaaccgg 958640  T

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Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 21022885 - 21022999
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| | || || || ||||||||||||||||||||| |||||||||||||||||| ||||||||||| |  |||||   ||| ||||    
T  21022885 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttac 21022984  T
Q  134 tcgtgtggcaaagcc 148  Q
    |||||||||| ||||    
T  21022985 tcgtgtggcacagcc 21022999  T

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Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 175
Target Start/End: Original strand, 3186090 - 3186202
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtgag 162  Q
    ||||||||||||||| ||||| || |||||||||| ||| ||||||| ||||| |||||||| |||| ||||||||||||| ||||||||  ||||||      
T  3186090 tcggcagttaactgccgccggtttactaaaacttctgcagttaactgtcgaaggacatttaggtaaaatactcgtgtggcacagccttatcaaatgtgta 3186189  T
Q  163 aacatcaattctc 175  Q
    |||| ||||||||    
T  3186190 aacagcaattctc 3186202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 16983595 - 16983519
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||| | || || |||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  16983595 tcggcagttaactaccgaggtttttctcggcagttaactgtagccggatttctaaaacttcggcagttaactgccga 16983519  T

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Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 29700268 - 29700348
Alignment:
Q  3 agagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||| | || || || ||||||||||||||||||||||    
T  29700268 agagagcttctgccagatttgtagcagaagatcatcggcaattaactaccgaggttttcctcggcagttaactgcagccgg 29700348  T

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Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 174
Target Start/End: Complemental strand, 56565833 - 56565693
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||||||||| || || || |||||||||||||||| ||||| || ||||||||||| || |||||||| |||||  ||||   |||| |||    
T  56565833 tcctcggtagttaactcccgaggttttcctcggcagttaactgccgccggtttactaaaacttcgacagttaactgctgaagagaattttcgtaaactac 56565734  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattct 174  Q
    |||||||||| ||||||||| ||||||  |||| |||||||    
T  56565733 tcgtgtggcacagccttatgtaatgtgtaaacagcaattct 56565693  T

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Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 16984158 - 16984237
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||   || || || |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16984158 tcctcggcagttaactatcgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccga 16984237  T

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Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 7485658 - 7485772
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || |||||||||||| |||||||| ||||||||||||||| || ||||||||||| |  ||||| | ||||||||    
T  7485658 tcctcggtagtttactgccgaagtcttcctcggcagttaattgcagccgtatttctaaaacttcgacagttaactgccgaggggcatttgggtaaattac 7485757  T
Q  134 tcgtgtggcaaagcc 148  Q
    |||||||||| ||||    
T  7485758 tcgtgtggcatagcc 7485772  T

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Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44561294 - 44561376
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| | ||  | || ||||| ||||||||||||||||    
T  44561294 tgagagagcttctgccagatttgtagcagacgatcctcggcagttaactaccgagattttcctcggtagttaactgcagccgg 44561376  T

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Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 6178099 - 6178191
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt-ctaaaacttcggcatttaactgccgaagaa 117  Q
    |||||||||||||||||||||||| | || || || ||||||||||||||||||||||||||   |||| ||||||| |||||||||||||||    
T  6178099 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaagaa 6178191  T

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Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 49094168 - 49094076
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt-ctaaaacttcggcatttaactgccgaagaa 117  Q
    |||||||||||||||||||||||| | || || || ||||||||||||||||||||||||||   |||| ||||||| |||||||||||||||    
T  49094168 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaagaa 49094076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 18884501 - 18884580
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||| |||  |||| ||||||| |||||||||||    
T  18884501 tcctcggcagttaactgccgaagtttttctcggcagttaactgcagccggtttttcaaaatttcggcagttaactgccga 18884580  T

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Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 21017975 - 21018085
Alignment:
Q  10 ttctgccagatttgtagc--agaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaa 106  Q
    ||||||||||||||||||  |||||||| ||||||||||||| | || || || |||||||||||| ||||||||||||| | |||| ||| ||| ||||    
T  21017975 ttctgccagatttgtagctcagaagatcatcggcagttaactgccgaggttttcctcggcagttaattgcagccggatttttcaaaatttcagcagttaa 21018074  T
Q  107 ctgccgaagaa 117  Q
    |||||||||||    
T  21018075 ctgccgaagaa 21018085  T

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Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 40833607 - 40833686
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  40833607 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccga 40833686  T

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Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 51037484 - 51037579
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    ||||| || |||||||||||| |||||||| |||||||||||||||||| ||||||||||| | ||||||   ||| |||||||||||||| ||||    
T  51037484 gaagttttcctcggcagttaattgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcacagcc 51037579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 38368302 - 38368193
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactc 135  Q
    ||||| |||| ||| | ||||| || |||||||||||||||||||||| ||  |||   ||||||| ||||||||||||| |||||| ||||||||||||    
T  38368302 ctcggtagtttactaccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaaggacatttggataaattactc 38368206  T
Q  136 gtgtggcaaagcc 148  Q
    |||||||| ||||    
T  38368205 gtgtggcatagcc 38368193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 38369198 - 38369260
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    ||||| || ||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  38369198 gaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaag 38369260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 16473696 - 16473817
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttat 152  Q
    ||||| || ||||| |||||||||| ||||| || |||||||||||||| |||||||||||||  |||||   |||| ||||||||||||| | ||||||    
T  16473696 gaagttttcctcggtagttaactgccgccggtttactaaaacttcggcagttaactgccgaagggcattttcgtaaagtactcgtgtggcacaaccttat 16473795  T
Q  153 gcaatgtgagaacatcaattct 174  Q
    | ||||||  |||| |||||||    
T  16473796 gtaatgtgtaaacagcaattct 16473817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 48806561 - 48806456
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| ||||| | || |||||||||||||||||||||| | | ||||| |||| || ||||||||||||    |||| ||||||||||    
T  48806561 tcctcggcagttaactgctgaaattttcctcggcagttaactgcagccggttctttaaaatttcgacagttaactgccgaaaggtatttggataaattac 48806462  T
Q  134 tcgtgt 139  Q
    ||||||    
T  48806461 tcgtgt 48806456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 51492147 - 51492006
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| | || || || || |||||||||||||||||||||||||||||||||| || |||| ||||||  | ||   |  | | ||||    
T  51492147 tcctcggcagttaactaccgaggttttcctaggcagttaactgcagccggatttctaaaacttcgacagttaattgccgagaagcaaaaacgtcatttac 51492048  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||| | ||||||| |||||| ||||| ||||||||    
T  51492047 tcgtgtggcacaaccttatgtaatgtgggaacaacaattctc 51492006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34154392 - 34154440
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34154392 tgagagagcttctgccagatttgtagcagaagatcctctgcagttaact 34154440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34530759 - 34530807
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34530759 tgagagagcttctgccaaatttgtagcagaagatcctcggcagttaact 34530807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39588175 - 39588127
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39588175 tgagagagcttctgccatatttgtagcagaagatcctcggcagttaact 39588127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 39590568 - 39590644
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||| | || || || ||||||||||||||||||| | |||||||||||||||||| |||||||||||    
T  39590568 tcggcagttaactaccgaggttttcctcggcagttaactgcagctgtatttctaaaacttcggcagttaactgccga 39590644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 41795345 - 41795437
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt-ctaaaacttcggcatttaactgccgaagaa 117  Q
    ||||||||||||||||||||||||   || || || ||||||||||||||||||||||||||   |||| ||||||| |||||||||||||||    
T  41795345 gcagaagatcctcggcagttaactaacgaggttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaagaa 41795437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 50447084 - 50446996
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacattt 122  Q
    ||||||| |||| ||| | ||||| || |||| |||||||||||||||| |||| ||||||||||||| |||||||||||||| |||||    
T  50447084 tcctcggtagtttactgccgaagttttcctcgacagttaactgcagccgtatttttaaaacttcggcagttaactgccgaagagcattt 50446996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 14200637 - 14200558
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| ||||||||||||||| || |||||||||||    
T  14200637 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactgccga 14200558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 15995798 - 15995719
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | || || || ||||||||||||||||||||||||||| ||  | ||||||||||||||||||    
T  15995798 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccga 15995719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 19069263 - 19069184
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | || || || ||||||||||||||||||||||||||| ||  | ||||||||||||||||||    
T  19069263 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccga 19069184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 46254445 - 46254524
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  46254445 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactaccga 46254524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 23220754 - 23220640
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| ||  |||||||||||||||||||| |||||||||||||||||| ||||||||| |||   ||||   ||| ||||    
T  23220754 tcctcggtagtttactgccgaagttttcatcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccaaagggtatttgagtaatttac 23220655  T
Q  134 tcgtgtggcaaagcc 148  Q
    |||||||||| ||||    
T  23220654 tcgtgtggcacagcc 23220640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 40061186 - 40061264
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    ||||| ||||||||||| |||| ||||||||||||||||  ||||||||||| |  ||||||| |||||||||||||||    
T  40061186 ctcggtagttaactgcaaccggttttctaaaacttcggcggttaactgccgatgggcatttaggtaaattactcgtgtg 40061264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 44680074 - 44680172
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactc 135  Q
    ||||||||||||| | || | | | ||||| |||||||||| ||||| || |||||||||||||| ||||||| ||||| |||||||| ||||||||||    
T  44680074 tcggcagttaactgccgaggaaatcctcggtagttaactgccgccggtttactaaaacttcggcagttaactgtcgaaggacatttaggtaaattactc 44680172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 243309 - 243362
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctga 54  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  243309 tgagagagcttctgccagatttgtaacagaagatcctcgacagttaactgctga 243362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 8111440 - 8111517
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    ||||| |||||||||||||||| || |  |||||||| || ||||||||||| | |||||||||||||||||||||||    
T  8111440 ctcggtagttaactgcagccggtttccacaaacttcgacaattaactgccgatggacatttagataaattactcgtgt 8111517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 43176625 - 43176730
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||||||| | ||||| || ||||||||||||||||||| || | | ||||| ||||||| ||||||| |||||   |||||| ||||||||    
T  43176625 tcctcggtagttaactgccgaagttttcctcggcagttaactgcagcaggttctttaaaatttcggcagttaactgtcgaagggtatttaggtaaattac 43176724  T
Q  134 tcgtgt 139  Q
    ||||||    
T  43176725 tcgtgt 43176730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 175
Target Start/End: Complemental strand, 49889753 - 49889617
Alignment:
Q  39 ggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaaga-acatttagataaattactcgt 137  Q
    ||||||||||||| || || || ||||||||||||||||| || |||||||||||||||| || ||||||||||| || |||   | || ||||||||||    
T  49889753 ggcagttaactcccga-gttttcctcggcagttaactgcaaccagatttctaaaacttcgacagttaactgccgaggagacaaaaatatcaattactcgt 49889655  T
Q  138 gtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
     || || | |||||||||||||| ||||  ||||||||    
T  49889654 atgccacaaccttatgcaatgtgggaacgacaattctc 49889617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6283431 - 6283479
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||    
T  6283431 tgagagagcttcggccagatttgaagcagaagatcctcggcagttaact 6283479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 9890071 - 9889991
Alignment:
Q  33 atcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||| | || || || ||||||||||||||||||||||||||| ||  | |||||| |||||||||||    
T  9890071 atcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 9889991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 23221667 - 23221778
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || |||||||||||||||||||||| ||  |||   ||||||| |||||||||||||  |||||  |||||||||    
T  23221667 tcctcggtagtttactaccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgaataaattac 23221763  T
Q  134 tcgtgtggcaaagcc 148  Q
    |||||||||| ||||    
T  23221764 tcgtgtggcatagcc 23221778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 28083990 - 28084066
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||| | || | | | ||||||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  28083990 tcggcagttaactaccgatgaaatcctcggcagttaactgcagctggatttctaaaacttcggcagttatctgccga 28084066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 37856746 - 37856846
Alignment:
Q  39 ggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtg 138  Q
    |||| |||||| ||||||| || |||||||  ||||||||||||| | | ||||| ||||||| ||||||||| ||| | |||||| |||||||||||||    
T  37856746 ggcaattaactactgaagttttcctcggcacctaactgcagccggttctttaaaatttcggcagttaactgccaaaggatatttaggtaaattactcgtg 37856845  T
Q  139 t 139  Q
    |    
T  37856846 t 37856846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 39773480 - 39773360
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || || || |||||||||||||||| ||||| || || |||||||||||| || ||| |||||| ||||||   ||| |||    
T  39773480 tcctcggcagttaactaccgaggttttcctcggcagttaactgctgccggtttcctaaaaacttcggcagtttactaccgaaggacatttccgtaactta 39773381  T
Q  133 ctcgtgtggcaaagccttatg 153  Q
    ||||||||||| |||| ||||    
T  39773380 ctcgtgtggcacagccatatg 39773360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 50020159 - 50020087
Alignment:
Q  68 agttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    ||||||||||| |||  ||||||||||||||||| |||||| || |||  |||||||||||||||||||||||    
T  50020159 agttaactgcaaccgattttctaaaacttcggcagttaactaccaaagggcatttagataaattactcgtgtg 50020087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 51429293 - 51429341
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  51429293 tgagagagcttcttccagatttgtagcagaagatcctcgacagttaact 51429341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 56304959 - 56304911
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  56304959 tgagagagcttctgccagatttgtagcagaaaatcctcggcaattaact 56304911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4786298 - 4786345
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaac 48  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  4786298 tgagagagcttctaccagatttgtagcagaagatcatcggcagttaac 4786345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 12376061 - 12375938
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || ||||| ||||||||||||||||  ||| | || ||||||| ||||||||||| | |||||| || |||||||    
T  12376061 tcctcggtagtttactgccgaagttttcctcggtagttaactgcagccgg--ttccataa-ttcggcagttaactgccgaggtacattttgaaaaattac 12375965  T
Q  134 tcgtgtggcaaagccttatgcaatgtg 160  Q
    ||||||| || ||| ||||||||||||    
T  12375964 tcgtgtgacacagctttatgcaatgtg 12375938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 48256567 - 48256618
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt 87  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  48256567 ctcggcagttaactactgaagttttcctcggcagttaactgcagccggattt 48256618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 36480537 - 36480639
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||||||| | ||||| || ||||| ||||||||||||||||  ||| | || ||||||| ||||||||||| |||||||| ||||||||||    
T  36480537 tcctcggtagttaactaccgaagttttcctcggtagttaactgcagccgg--ttccataa-ttcggcagttaactgccgaggaacatttggataaattac 36480633  T
Q  134 tcgtgt 139  Q
    | ||||    
T  36480634 ttgtgt 36480639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 50023580 - 50023650
Alignment:
Q  70 ttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    |||||||||||||  |||||||||||| |||| ||||||||||| |  ||||||||||||||||| |||||    
T  50023580 ttaactgcagccgattttctaaaactttggcagttaactgccgaggggcatttagataaattacttgtgtg 50023650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 50030698 - 50030768
Alignment:
Q  70 ttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    |||||||||||||  |||||||||||| |||| ||||||||||| |  ||||||||||||||||| |||||    
T  50030698 ttaactgcagccgattttctaaaactttggcagttaactgccgaggggcatttagataaattacttgtgtg 50030768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 44674212 - 44674163
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgcc 111  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  44674212 ctcggcagttaactgcagccgggtttcttaaacttcggcagttaactgcc 44674163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 148
Target Start/End: Complemental strand, 55587412 - 55587320
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    ||||| || |||||||||||||||||||||| ||  |||   ||||||| |||||||||||||  ||||| | |||||||||||||||||| ||||    
T  55587412 gaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgggtaaattactcgtgtggcatagcc 55587320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 55588303 - 55588395
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    ||||| || |||||||||||||||||||||| ||  |||   ||||||| |||||||||||||  ||||| | |||||||||||||||||| ||||    
T  55588303 gaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgggtaaattactcgtgtggcatagcc 55588395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 175
Target Start/End: Complemental strand, 7484782 - 7484665
Alignment:
Q  54 aagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatg 153  Q
    |||| |||||||||||||| |||||||||| ||  |||   ||||||| ||||||||||| |  ||||| |||||||||||||||||||| ||||  |      
T  7484782 aagtttttctcggcagtta-ctgcagccggtttcataa---ttcggcagttaactgccgaggggcatttggataaattactcgtgtggcatagccaaacc 7484687  T
Q  154 caatgtgagaacatcaattctc 175  Q
     |||||| ||||||||||||||    
T  7484686 aaatgtgggaacatcaattctc 7484665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 21015815 - 21015736
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | || || |  ||| ||||||||||||| ||| ||||||||||||||| || |||||||||||    
T  21015815 tcctcggcagttaactaccgaggtttccctcagcagttaactgcacccgtatttctaaaacttcgacagttaactgccga 21015736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 143
Target Start/End: Complemental strand, 28234490 - 28234383
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactc 135  Q
    |||||||||||||| | || || || ||||||| |||||||| ||||| || ||||||||||| || ||||||| |||||  |||||   |||| |||||    
T  28234490 ctcggcagttaactaccgaggttttcctcggcatttaactgccgccggtttactaaaacttcgacaattaactgtcgaagggcatttttgtaaagtactc 28234391  T
Q  136 gtgtggca 143  Q
    ||||||||    
T  28234390 gtgtggca 28234383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 40354601 - 40354656
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaa 117  Q
    ||||||| ||||||||||||||||||  |||| ||||||| |||||||||||||||    
T  40354601 ctcggcaattaactgcagccggattttcaaaatttcggcagttaactgccgaagaa 40354656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42885560 - 42885510
Alignment:
Q  1 tgagagagcttctgccagattt--gtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  42885560 tgagagagcttctgccagatttttgtagcagaagatcatcggcagttaact 42885510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 49169094 - 49169209
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || ||||| |||||||||||||||| ||||| || || |||||||||| |   ||||||||||| ||||||   ||  |||    
T  49169094 tcctcggcagttaactaccgaggtattcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaaggacattttcgtatttta 49169193  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  49169194 ctcgtgtggcacagcc 49169209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 50274808 - 50274757
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||||||||||||  | |||||| |||||||||||    
T  50274808 ctcggcagttaactgcagccggatttctaattcctcggcagttaactgccga 50274757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 54634012 - 54634127
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || || || |||||||||||||||| ||||| || || |||||||||||| || ||| ||||||  |||||   ||| |||    
T  54634012 tcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaactta 54634111  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  54634112 ctcgtgtggcacagcc 54634127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 143
Target Start/End: Complemental strand, 31242264 - 31242182
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaa-cttcggcatttaactgccgaagaacatttagataaattactcgtgtggca 143  Q
    |||||||||||||||| ||||| || |||||| |||||||| |||||||||||||  |||||   ||| ||||||||||||||    
T  31242264 ctcggcagttaactgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttgagtaatttactcgtgtggca 31242182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 37563277 - 37563395
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || || || |||||||||||||||| ||||| || || ||||||||| || || ||| ||||||  |||||   ||| |||    
T  37563277 tcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttcctaaaaacttcgacagtttactaccgaagggcatttccgtaactta 37563376  T
Q  133 ctcgtgtggcaaagcctta 151  Q
    ||||||||||| |||||||    
T  37563377 ctcgtgtggcacagcctta 37563395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 46165790 - 46165680
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtga 161  Q
    ||||| ||||||||||||||||  ||| | || |||| || ||||||||||||| |||||| | ||||||||| ||||| || |||||||| |||||||     
T  46165790 ctcggtagttaactgcagccgg--ttccataa-ttcgacagttaactgccgaaggacatttcggtaaattactagtgtgacacagccttatacaatgtgt 46165694  T
Q  162 gaacatcaattctc 175  Q
     |||| ||||||||    
T  46165693 caacaacaattctc 46165680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 3403895 - 3403842
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    ||||||||||||||||||||||||||| ||  | |||||| |||||||||||||    
T  3403895 ctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaag 3403842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 140
Target Start/End: Original strand, 51494875 - 51494952
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    |||||||||| |||| ||| | || |||||||||| ||| |||||||||||||  ||||||| ||||||| |||||||    
T  51494875 tcggcagttagctgccgccagtttactaaaacttctgcagttaactgccgaagggcatttaggtaaattattcgtgtg 51494952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 44795110 - 44794994
Alignment:
Q  59 tttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatg 158  Q
    ||||||||||||| ||||| ||| | || |||||||||||||| ||||||||||||   |||||   |||| ||||||||| ||| ||||| ||| || |    
T  44795110 tttctcggcagtttactgccgccagtttactaaaacttcggcagttaactgccgaatggcattttcgtaaagtactcgtgtagcacagcctcatgtaaag 44795011  T
Q  159 tgagaacatcaattctc 175  Q
    ||  |||| ||||||||    
T  44795010 tgtaaacagcaattctc 44794994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 15999796 - 15999875
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | || || || |||||||||||| |||||||||||||| ||    |||||| |||||||||||    
T  15999796 tcctcggcagttaactaccgaggttttcctcggcagttaattgcagccggatttcaaatttctcggcagttaactgccga 15999875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 20208580 - 20208481
Alignment:
Q  40 gcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    |||||||||| | || || || |||||||||||||||||||||| | |   ||||||||||| ||||||||||| | ||||||   ||| ||||||||||    
T  20208580 gcagttaactaccgaggttttcctcggcagttaactgcagccggttctagtaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgt 20208481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 148
Target Start/End: Original strand, 26792269 - 26792356
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaa-cttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    |||||||||||||||| ||||| || |||||| |||||||| |||| ||||||||  |||||   ||| |||||||||||||| ||||    
T  26792269 ctcggcagttaactgccgccggtttactaaaaacttcggcagttaattgccgaagggcatttgagtaatttactcgtgtggcacagcc 26792356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 26932660 - 26932553
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || || || |||||||||||||| | ||||| | ||| |||||||||||| || ||| |||||| ||||||   ||| |||    
T  26932660 tcctcggcagttaactaccgaggttttcctcggcagttaactaccgccggttgtctaaaaacttcggcagtttactaccgaaggacatttgagtaattta 26932561  T
Q  133 ctcgtgtg 140  Q
    ||||||||    
T  26932560 ctcgtgtg 26932553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 85 - 140
Target Start/End: Complemental strand, 40061126 - 40061071
Alignment:
Q  85 tttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    |||||||||||||| || ||||||||||| |  ||||||| |||||||||||||||    
T  40061126 tttctaaaacttcgacagttaactgccgaggggcatttaggtaaattactcgtgtg 40061071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 48807389 - 48807488
Alignment:
Q  40 gcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    |||||||||| | ||||| || ||| |||||||||||||||||| | | ||||| |||| || ||||||||||| | ||||||   ||| ||||||||||    
T  48807389 gcagttaactgccgaagttttcctcagcagttaactgcagccggttctttaaaatttcgacagttaactgccgagggacatttgagtaatttactcgtgt 48807488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 17342216 - 17342170
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccg 82  Q
    |||||||||||||| | ||||| |||||||| |||||||||||||||    
T  17342216 ctcggcagttaactaccgaagtttttctcggtagttaactgcagccg 17342170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 19682177 - 19682211
Alignment:
Q  103 ttaactgccgaagaacatttagataaattactcgt 137  Q
    ||||||||||||||| |||||||||||||||||||    
T  19682177 ttaactgccgaagaatatttagataaattactcgt 19682211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 30726738 - 30726848
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || || || |||||||||||||||| ||||| || || |||| ||||||| || ||| |||||| ||||||   ||  |||    
T  30726738 tcctcggcagttaactaccgaggttttcctcggcagttaactgctgccggtttcctaaaaatttcggcagtttactaccgaaggacatttccgtatttta 30726837  T
Q  133 ctcgtgtggca 143  Q
    |||||||||||    
T  30726838 ctcgtgtggca 30726848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 34503785 - 34503739
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagc 80  Q
    |||||||||||||||| | ||||| |||||||| |||||||||||||    
T  34503785 tcctcggcagttaactaccgaagtttttctcggtagttaactgcagc 34503739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 34528205 - 34528115
Alignment:
Q  69 gttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgt 159  Q
    ||||||||| ||||| || ||||||||||| || ||||||| |||||  |||||   |||| ||||||||| ||| ||||||||| |||||    
T  34528205 gttaactgccgccggtttactaaaacttcgacagttaactgtcgaagggcattttcgtaaagtactcgtgtagcacagccttatgtaatgt 34528115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 955865 - 955820
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccg 82  Q
    ||||||||||||| | || || ||||||||||||||||||||||||    
T  955865 tcggcagttaactaccgaggtttttctcggcagttaactgcagccg 955820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 28320550 - 28320493
Alignment:
Q  118 catttagataaattactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    ||||| ||||||||||||||||| || | ||||||||||||||  |||| ||||||||    
T  28320550 catttcgataaattactcgtgtgacacaaccttatgcaatgtgtcaacaacaattctc 28320493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 33051649 - 33051706
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttct-cggcagttaactgcagccggatttcta 90  Q
    |||||||||||||| | | ||||| ||||| |||||||||||||||||||| ||||||    
T  33051649 tcctcggcagttaattgccgaagtttttcttcggcagttaactgcagccggttttcta 33051706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 37855907 - 37855846
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacattta 123  Q
    |||||||||||||||||||||| | | ||||| ||||| | ||||||||||| ||| |||||    
T  37855907 ctcggcagttaactgcagccggttctttaaaatttcggaagttaactgccgatgaatattta 37855846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 37865232 - 37865203
Alignment:
Q  20 tttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||||||||||||||||||    
T  37865232 tttgtagcagaagatcctcggcagttaact 37865203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 140
Target Start/End: Original strand, 50196936 - 50197013
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    |||| |||||||||||| |   ||||||||||||||| | ||||||||||| |  ||||||| ||||||| |||||||    
T  50196936 tcggtagttaactgcagtcaattttctaaaacttcggtagttaactgccgaggggcatttaggtaaattattcgtgtg 50197013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 91
Target Start/End: Original strand, 50278823 - 50278852
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaa 91  Q
    ||||||||||||||||||||||||||||||    
T  50278823 ctcggcagttaactgcagccggatttctaa 50278852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 51036551 - 51036474
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    |||||||||||||| |||||| ||||||||||||||| ||  |||||| ||| |  ||||| | ||||||||| ||||    
T  51036551 ctcggcagttaactacagccgtatttctaaaacttcgacagctaactgtcgaggggcatttgggtaaattactagtgt 51036474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 51426610 - 51426565
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccg 82  Q
    ||||||||||||| |||| || |||||||||| |||||||||||||    
T  51426610 tcggcagttaactactgaggtttttctcggcaattaactgcagccg 51426565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 4768731 - 4768675
Alignment:
Q  57 tatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||||||| |||||  ||  | |||||| |||||||||||    
T  4768731 tatttctcggcagttaactgcagccagattttgaattcctcggcagttaactgccga 4768675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 9013900 - 9013972
Alignment:
Q  68 agttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    |||||||||||||||| |  |  ||| ||||||| |||||||||||||   |||||| |||||||||||||||    
T  9013900 agttaactgcagccggttgccacaaaattcggcagttaactgccgaagggaatttaggtaaattactcgtgtg 9013972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 14201527 - 14201638
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || |||||||||||||||||||||| ||  |||   ||||||| ||||||||||| |  |||||   ||| ||||    
T  14201527 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaggggcatttgagtaatttac 14201623  T
Q  134 tcgtgtggcaaagcc 148  Q
    |||||||||| ||||    
T  14201624 tcgtgtggcatagcc 14201638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 55407791 - 55407843
Alignment:
Q  35 cctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt 87  Q
    ||||||||||||||| | ||  | || ||||||||||||||||||||||||||    
T  55407791 cctcggcagttaactaccgagattttcctcggcagttaactgcagccggattt 55407843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 101)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 55385246 - 55385134
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggc 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| | || || || |||||||||||||||||||||||||||||||||||||||    
T  55385246 tgagagagcttctgccagatttgtagcagaagatcctcgacagttaactaccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggc 55385147  T
Q  101 atttaactgccga 113  Q
    | |||||||||||    
T  55385146 agttaactgccga 55385134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 34694398 - 34694573
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||||||||||||||||  | ||| |    
T  34694398 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcccgaggtttttctcggcagtttactgcagccggatttctaattcctcgac 34694497  T
Q  101 atttaactgccga-agaacatttagataaattactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    | |||||||||||  |  ||||||| |||||||||||||||  | | ||||||  |||||| ||||| ||||||||    
T  34694498 agttaactgccgagggggcatttaggtaaattactcgtgtgttataaccttatcaaatgtgggaacaacaattctc 34694573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24703379 - 24703491
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggc 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |  || ||||||||||||||||| ||| ||||||||||||||||     
T  24703379 tgagagagcttctgccagatttgtagcagaagatcatcggcagttaactcctgaggatttcctcggcagttaactgcatccgaatttctaaaacttcggt 24703478  T
Q  101 atttaactgccga 113  Q
    | |||||||||||    
T  24703479 agttaactgccga 24703491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 2271286 - 2271391
Alignment:
Q  10 ttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    |||||||||||||||||||||||||||||||||||||||||| || |  |  ||||||||||||||||||||||||||||||||||||| || |||||||    
T  2271286 ttctgccagatttgtagcagaagatcctcggcagttaactcccgaggattccctcggcagttaactgcagccggatttctaaaacttcgacagttaactg 2271385  T
Q  110 ccgaag 115  Q
    ||||||    
T  2271386 ccgaag 2271391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 36134423 - 36134318
Alignment:
Q  10 ttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    |||||||||||||||||||||||||||||||||||||||||| || || || |||||||||||||||||| ||||||||||||||||||| | ||||||     
T  36134423 ttctgccagatttgtagcagaagatcctcggcagttaactcccgaggttttcctcggcagttaactgcagacggatttctaaaacttcggtagttaactt 36134324  T
Q  110 ccgaag 115  Q
    ||||||    
T  36134323 ccgaag 36134318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 4004776 - 4004881
Alignment:
Q  10 ttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    ||||||||| |||||||||||||||||||||||||||| | | || || || |||||||||||||||||||||||||||||||||||||||| ||||||     
T  4004776 ttctgccaggtttgtagcagaagatcctcggcagttaagtaccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcaattaacta 4004875  T
Q  110 ccgaag 115  Q
    ||||||    
T  4004876 ccgaag 4004881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 43476301 - 43476188
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgga-tttctaaaacttcgg 99  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| | || || || ||||||||||||||||||||||| |||||||||||||||    
T  43476301 tgagagagcttctgtcagatttgtagcaaaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggattttctaaaacttcgg 43476202  T
Q  100 catttaactgccga 113  Q
    || |||||| ||||    
T  43476201 cagttaacttccga 43476188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 41803107 - 41802995
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggc 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| | || || || |||||||||||||||||||||| |||  ||  |||||||    
T  41803107 tgagagagcttctgccagatttgtagcaaaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttttaaattcttcggc 41803008  T
Q  101 atttaactgccga 113  Q
    | |||||||||||    
T  41803007 agttaactgccga 41802995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 42166407 - 42166548
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| | ||||| || |||||||||| ||||| ||||| || |||||||||||||| ||||||||||||  ||||||   |||| |||    
T  42166407 tcctcggcagttaactaccgaagttttcctcggcagtttactgccgccggtttactaaaacttcggcagttaactgccgaatgacatttttgtaaagtac 42166506  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||| | ||||||| ||||||  |||||||||||||    
T  42166507 tcgtgtggcacaaccttatgtaatgtgtaaacatcaattctc 42166548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 43478827 - 43478969
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga-agaacatttagataaatta 132  Q
    |||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| ||| |||||||||||  | |||   | || | |||    
T  43478827 tcctcggcagttaactaccgaagttttcctcggcagttaactgcagccggatttctaaaacttcagcagttaactgccgaggggacaaaaacatcattta 43478926  T
Q  133 ctcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    ||||||||||| | ||||||| |||||| ||||| ||||||||    
T  43478927 ctcgtgtggcacaaccttatgtaatgtgggaacaacaattctc 43478969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 52570530 - 52570642
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggc 100  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| | || || |||||||| |||||||||||| ||| |||  ||  |||||||    
T  52570530 tgagagagtttctgccagatttgtagtagaagatcctcggcagttaactaccgaggtttttctcggtagttaactgcagtcggtttttgaattcttcggc 52570629  T
Q  101 atttaactgccga 113  Q
    | |||||||||||    
T  52570630 agttaactgccga 52570642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 34 - 176
Target Start/End: Original strand, 4015126 - 4015268
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| | || || || |||||||||||||| | ||||| || |||||||||||||| |||||||||||||  |||||   |||| |||    
T  4015126 tcctcggcagttaacttccgaggttttcctcggcagttaactcccgccggtttactaaaacttcggcagttaactgccgaagggcattttcgtaaagtac 4015225  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctcc 176  Q
    ||||||| || ||||||||| ||||||  |||| |||||||||    
T  4015226 tcgtgtgacacagccttatgtaatgtgtaaacagcaattctcc 4015268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 45101812 - 45101894
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |  ||| |   ||||||||||||||||||||||    
T  45101812 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccaaagaaaacctcggcagttaactgcagccgg 45101894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 2062460 - 2062359
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactc 135  Q
    |||||||||||||| | ||||| || |||| ||||||||||||||| | ||||||||||||||||| |||||||||||||   |||| ||||||||||||    
T  2062460 ctcggcagttaactgccgaagttttcctcgacagttaactgcagccagttttctaaaacttcggcagttaactgccgaagggtatttggataaattactc 2062361  T
Q  136 gt 137  Q
    ||    
T  2062360 gt 2062359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 8475902 - 8475761
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||| |||||||||| | || || || |||||||||||||||| ||||| || |||||||||||||| ||||||||||||| ||||||   |||| |||    
T  8475902 tcctcagcagttaactaccgaggttttcctcggcagttaactgccgccggtttactaaaacttcggcagttaactgccgaaggacattttcgtaaagtac 8475803  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||| | ||||||| ||| ||  |||| ||||||||    
T  8475802 tcgtgtggcacaaccttatgtaatatgtaaacagcaattctc 8475761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 55207627 - 55207739
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |  | ||  | || |||||||||||||| |||| |||  ||  |||||||    
T  55207627 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccaaggttgtcctaggcagttaactgcaaccggtttttgaattcttcggc 55207726  T
Q  101 atttaactgccga 113  Q
    | |||||||||||    
T  55207727 agttaactgccga 55207739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 14043897 - 14044000
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactc 135  Q
    |||||||||||||| | ||||| || |||||||||||||||||||||  |||||||||||||| || |||||||||||||   |||| | ||||||||||    
T  14043897 ctcggcagttaactgccgaagttttcctcggcagttaactgcagccgattttctaaaacttcgacagttaactgccgaagggtatttgggtaaattactc 14043996  T
Q  136 gtgt 139  Q
    ||||    
T  14043997 gtgt 14044000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 4331836 - 4331958
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttat 152  Q
    ||||| || ||| |||||||||||| ||||| || |||||||||||||| ||||||||||||| | ||||   |||| ||||||||||||| ||||||||    
T  4331836 gaagttttcctcagcagttaactgccgccggtttactaaaacttcggcagttaactgccgaaggatattttcgtaaagtactcgtgtggcacagccttat 4331935  T
Q  153 gcaatgtgagaacatcaattctc 175  Q
    | ||||||  |||| ||||||||    
T  4331936 gtaatgtgtaaacagcaattctc 4331958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 53 - 175
Target Start/End: Complemental strand, 19988516 - 19988394
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttat 152  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| |  |||||   ||| |||||||||||||| ||||  |     
T  19988516 gaagtttttctcggcagtcaactgcagccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaac 19988417  T
Q  153 gcaatgtgagaacatcaattctc 175  Q
      |||||||||||| ||||||||    
T  19988416 caaatgtgagaacagcaattctc 19988394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 27739564 - 27739678
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| |||||||||||||||||| |||||||||||||   ||||   ||| ||||    
T  27739564 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttac 27739663  T
Q  134 tcgtgtggcaaagcc 148  Q
    |||||||||| ||||    
T  27739664 tcgtgtggcacagcc 27739678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 34543133 - 34543247
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| |||||||||||||||||| ||||||||||| | ||||||   ||| ||||    
T  34543133 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttac 34543232  T
Q  134 tcgtgtggcaaagcc 148  Q
    || ||||||| ||||    
T  34543233 tcatgtggcacagcc 34543247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 2647672 - 2647780
Alignment:
Q  10 ttctgccagattt-gtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaac 107  Q
    ||||||||||||| |||| || ||||||||||||||||||| | || || || |||||||||||||||||||||||||| | |||| ||||||| |||||    
T  2647672 ttctgccagattttgtag-agcagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaac 2647770  T
Q  108 tgccgaagaa 117  Q
    ||||||||||    
T  2647771 tgccgaagaa 2647780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 3493665 - 3493550
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct--aaaacttcggcatttaactgccgaagaacatttagataaatt 131  Q
    |||||||||||||||||| || || |||||| |||||||||||| ||||| |||||  |||||||||||| ||||||| ||| |||||||||  ||| ||    
T  3493665 tcctcggcagttaactcccgaggtttttctctgcagttaactgccgccgg-tttcttaaaaacttcggcagttaactgtcgaggaacatttaagtaattt 3493567  T
Q  132 actcgtgtggcaaagcc 148  Q
    |||||||||||| ||||    
T  3493566 actcgtgtggcacagcc 3493550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 3497359 - 3497244
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct--aaaacttcggcatttaactgccgaagaacatttagataaatt 131  Q
    |||||||||||||||||| || || |||||| |||||||||||| ||||| |||||  |||||||||||| ||||||| ||| |||||||||  ||| ||    
T  3497359 tcctcggcagttaactcccgaggtttttctctgcagttaactgccgccgg-tttcttaaaaacttcggcagttaactgtcgaggaacatttaagtaattt 3497261  T
Q  132 actcgtgtggcaaagcc 148  Q
    |||||||||||| ||||    
T  3497260 actcgtgtggcacagcc 3497244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 7941186 - 7941081
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| | ||||| || ||| |||||||||||||||||| | | ||||| ||||||| |||||||||||||   |||||| ||||||||    
T  7941186 tcctcggcagttaactgccgaagttttcctcagcagttaactgcagccggttctttaaaatttcggcagttaactgccgaagggtatttaggtaaattac 7941087  T
Q  134 tcgtgt 139  Q
    ||||||    
T  7941086 tcgtgt 7941081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41577184 - 41577107
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||| | ||||| ||| ||| ||||||||||||    
T  41577184 tgagagagcttctgcaagatttgtagcagaagatcctcggcagtttactaccgaagtttttgtcgacagttaactgca 41577107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 49219758 - 49219867
Alignment:
Q  4 gagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatt 103  Q
    ||||||||||| || |||||||||||||||||||||  |||||||| |  | || || ||||||||||||||||||||||||||||||  | |||||| |    
T  49219758 gagagcttctgtcaaatttgtagcagaagatcctcgatagttaactaccaaggttttcctcggcagttaactgcagccggatttctaattcctcggcagt 49219857  T
Q  104 taactgccga 113  Q
    ||||| ||||    
T  49219858 taactaccga 49219867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 16484453 - 16484532
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||||||| |||||| |||| ||  ||||||||||    
T  16484453 tcctcggcagttaactcccgaagttttcctcggcagttaactgcagccggattactaaaatttcgacaggtaactgccga 16484532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 48246488 - 48246409
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | || || || |||| ||||||||||||||||||||||||||||||| ||| |||||||||||    
T  48246488 tcctcggcagttaactaccgaggttttcctcgacagttaactgcagccggatttctaaaacttcagcagttaactgccga 48246409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 51402362 - 51402436
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaact 75  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| | || || || |||| |||||||||    
T  51402362 tgagagagcttctgacagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcgacagttaact 51402436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 4008320 - 4008429
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||||| || || ||||||| ||||||||||| ||||| || |||||| ||||||| || ||||||||||  |||||   |||| |||    
T  4008320 tcctcggcagttaactcccgaggtttttctcgacagttaactgccgccggtttactaaaatttcggcagtttactgccgaagggcatttttgtaaaatac 4008419  T
Q  134 tcgtgtggca 143  Q
    ||||||||||    
T  4008420 tcgtgtggca 4008429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 42165239 - 42165098
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| | || || || ||||||| |||||||| ||||| || |||||||||| |||  ||||||||||||  |||||   |||| |||    
T  42165239 tcctcggcagttaactaccgaggttttcctcggcaattaactgccgccggtttactaaaacttcagcagctaactgccgaagggcattttcgtaaaatac 42165140  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||| ||||||||  ||||||  |||| ||||||||    
T  42165139 tcgtgtggcacagccttatcaaatgtgtaaacaacaattctc 42165098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 49609490 - 49609405
Alignment:
Q  3 agagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttc 88  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||| | || || ||||||| || |||||||| |||| |||||    
T  49609490 agagagcttatgccagatttgtagcagaagttcctcggcagttaactaccgaggtttttctcgacaattaactgcggccgaatttc 49609405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 50998706 - 50998791
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||| |  |||||   ||| |||||||||||||| ||||    
T  50998706 tcggcagttaactgcagccggatttataaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagcc 50998791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 12897900 - 12897824
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgc 110  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  12897900 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgc 12897824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13896840 - 13896920
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagcc 81  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||||||| | || || || |||| |||||||||||||||    
T  13896840 tgagagagcttctgccagatttgtagtagaaaatcttcggcagttaactaccgaggttttcctcgacagttaactgcagcc 13896920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 16611147 - 16611075
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactc 135  Q
    ||||||||||||||| ||||| ||||||||||||||| | |||||||||||||  ||||||| ||||||||||    
T  16611147 tcggcagttaactgccgccggttttctaaaacttcggtagttaactgccgaagggcatttaggtaaattactc 16611075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19454315 - 19454363
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19454315 tgagagagcttctgccagatttgtagtagaagatcctcggcagttaact 19454363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 22048106 - 22048178
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactc 135  Q
    ||||||||||||||| ||||| ||||||||||||||| | |||||||||||||  ||||||| ||||||||||    
T  22048106 tcggcagttaactgccgccggttttctaaaacttcggtagttaactgccgaagggcatttaggtaaattactc 22048178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 45076246 - 45076350
Alignment:
Q  34 tcctcggcagttaactcctgaagtattt-ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | ||||| ||| |||||||||||||| ||||||| | | ||||| ||||||| ||||||||||||| | |||| | |||||||    
T  45076246 tcctcggcagttaactgccgaagttttttctcggcagttaactacagccggttctttaaaatttcggcagttaactgccgaaggatatttgggtaaatta 45076345  T
Q  133 ctcgt 137  Q
    |||||    
T  45076346 ctcgt 45076350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 49140836 - 49140928
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt-ctaaaacttcggcatttaactgccgaagaa 117  Q
    ||||||| |||||||||||||||| |||| || || ||||||||||||||||||||||||||    ||| ||||||| |||||||||||||||    
T  49140836 gcagaagttcctcggcagttaactactgaggttttcctcggcagttaactgcagccggatttgagcaaatttcggcaattaactgccgaagaa 49140928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 51696538 - 51696586
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  51696538 tgagagagcttctgccagatttgcagcagaagatcctcggcagttaact 51696586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 54389879 - 54389787
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt-ctaaaacttcggcatttaactgccgaagaa 117  Q
    ||||||| |||||||||||||||| | || || || ||||||||||||||||||||||||||   |||| ||||||| |||||||||||||||    
T  54389879 gcagaagttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaagaa 54389787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 2743474 - 2743395
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||||| || || || ||||||||||||||||||||||||||| ||  | |||||| |||||||||||    
T  2743474 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 2743395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 4002788 - 4002737
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  4002788 ctcggcagttaactgcagccggatttctaaaacttcggcaattaaatgccga 4002737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 16647172 - 16647223
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  16647172 ctcggcagttaactgcagccggatttctaaaacatcggcagttaactgccga 16647223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 19341591 - 19341670
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | ||||| || ||||| ||||||||||||||||||||||||  | |||||| |||||||||||    
T  19341591 tcctcggcagttaactgccgaagttttcctcggtagttaactgcagccggatttctaattcctcggcagttaactgccga 19341670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 28816998 - 28817077
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| ||||||||||||| |||| |||||||||||    
T  28816998 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaactttggcagttaactgccga 28817077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 11249521 - 11249635
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||  |||||||||||||| ||| |||||||||||||   ||||   ||| ||||    
T  11249521 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccatatttctaaaacttcagcagttaactgccgaagggtatttgagtaatttac 11249620  T
Q  134 tcgtgtggcaaagcc 148  Q
    |||||||||| ||||    
T  11249621 tcgtgtggcacagcc 11249635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 17561807 - 17561729
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    ||||| |||||||||||||||| ||||||||| ||||||| ||||||| | | | |||||||| |||||||||||||||    
T  17561807 ctcgggagttaactgcagccggttttctaaaatttcggcagttaactgtcaagggacatttaggtaaattactcgtgtg 17561729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 41137817 - 41137718
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggc 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||          || || ||||||||||||||||||||||||||| ||  | |||||    
T  41137817 tgagagagcttctgccagatttgtagcagaagatcctcggtagtt----------gttttcctcggcagttaactgcagccggatttcaaattcctcggc 41137728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 20350667 - 20350594
Alignment:
Q  61 tctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattact 134  Q
    |||||| ||||||||||||||   |||||||||||||| || ||||||||||| ||||||||| ||||||||||    
T  20350667 tctcggtagttaactgcagccaattttctaaaacttcgacaattaactgccgatgaacatttaaataaattact 20350594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 6143747 - 6143659
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacattt 122  Q
    |||||||||||||||| | ||||| || |||||||||||||||||||||| | | | ||| ||| ||| ||||||||||||| ||||||    
T  6143747 tcctcggcagttaactgccgaagttttcctcggcagttaactgcagccggttcttttaaatttcagcaattaactgccgaaggacattt 6143659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 34049164 - 34049072
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt-ctaaaacttcggcatttaactgccgaagaa 117  Q
    ||||||| |||||||||||||||| | || || || ||||||||||||||||||||||||||    ||| ||||||| |||||||||||||||    
T  34049164 gcagaagttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagcaaatttcggcagttaactgccgaagaa 34049072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 600541 - 600616
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    |||||||||||||||| | || || || |||| ||||||||||| |||||||||| |||||||||||| |||||||    
T  600541 tcctcggcagttaactaccgaggttttcctcgacagttaactgcggccggatttccaaaacttcggcagttaactg 600616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 19750090 - 19750039
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  19750090 ctcggcagttaactgcagccgtatttctaaaatttcggcagttaactgccga 19750039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 4002502 - 4002556
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttc 88  Q
    |||||||||||||||||| || || || |||||||||||||||||||||||||||    
T  4002502 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttc 4002556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7245201 - 7245155
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaa 47  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  7245201 tgagagagcttctgtcagatttgtagcagaagatactcggcagttaa 7245155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 16861177 - 16861099
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    ||||| ||||||||||| |||| |||||||||||||| || ||||||| ||| |  ||||||| |||||||||||||||    
T  16861177 ctcggtagttaactgcatccggttttctaaaacttcgacagttaactgtcgaggggcatttaggtaaattactcgtgtg 16861099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 10492103 - 10491962
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || |||| |||||||||||||||| ||||||||||||||| || |||||| |||| | ||||||   ||| ||||    
T  10492103 tcctcggtagtttactgccgaagttttcctcgtcagttaactgcagccgtatttctaaaacttcgacagttaactaccgatggacatttgagtaatttac 10492004  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    || | ||||| ||||  ||  || ||| ||||||||||||||    
T  10492003 tcatatggcacagccaaatcaaacgtgggaacatcaattctc 10491962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 32593109 - 32593210
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||||||||||||   ||||| || ||||| |||||||||||||||| | | ||||| |||| || ||||||||||||  | |||| ||||||||||    
T  32593109 tcctcggcagttaactatcgaagttttcctcggaagttaactgcagccggttctttaaaatttcgacagttaactgccgaaagatatttggataaattac 32593208  T
Q  134 tc 135  Q
    ||    
T  32593209 tc 32593210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43568975 - 43568927
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||    
T  43568975 tgagagagcttctgtcagatttgtaacagaagatcctcagcagttaact 43568927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 2274947 - 2275054
Alignment:
Q  68 agttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtgagaacat 167  Q
    ||||||| || ||||| || ||||||||| |||| ||||||||| ||  |||||||| ||||||||||||||| || ||| ||||  ||||||  ||||     
T  2274947 agttaacggccgccggtttactaaaactttggcagttaactgcccaatgacatttaggtaaattactcgtgtgacacagctttatcaaatgtgtaaacag 2275046  T
Q  168 caattctc 175  Q
    ||||||||    
T  2275047 caattctc 2275054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 11270283 - 11270386
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactc 135  Q
    |||||||||||||| | ||||| || || ||||||||||||||||||| | | | ||| ||||||| ||||||| ||||  ||||||  |||| ||||||    
T  11270283 ctcggcagttaactgccgaagttttccttggcagttaactgcagccggttcttttaaatttcggcagttaactgtcgaaagacatttgaataatttactc 11270382  T
Q  136 gtgt 139  Q
    ||||    
T  11270383 gtgt 11270386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 34542201 - 34542132
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattact 134  Q
    |||||||||||||||||||||| ||  |||   ||| ||| |||||||||||||||||||||| |||||||||    
T  34542201 ctcggcagttaactgcagccggtttcataa---ttcagcagttaactgccgaagaacatttaggtaaattact 34542132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 10658899 - 10658798
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| |  |||| || ||||||||||| |||||||||| | | | ||| ||||||| ||||| ||||||| ||||||  |||| ||||    
T  10658899 tcctcggcagttaactgccaaagttttcctcggcagttagctgcagccggttcttttaaatttcggcagttaacagccgaaggacatttgcataatttac 10658800  T
Q  134 tc 135  Q
    ||    
T  10658799 tc 10658798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 46347685 - 46347766
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccg 82  Q
    |||||||| |||| || |||||||||||||||||| ||| ||||||| |   || || || |||||||||||||||||||||    
T  46347685 tgagagagtttctccctgatttgtagcagaagatcttcgacagttaattatcgaggttttcctcggcagttaactgcagccg 46347766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 48250868 - 48250945
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| || || || ||||||||||||||||||||||| ||| ||  | || ||| |||||||||||    
T  48250868 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccggaattcaaattcctcagcagttaactgccga 48250945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 46402430 - 46402374
Alignment:
Q  62 ctcggcagttaactgcagccggattt-ctaaaacttcggcatttaactgccgaagaa 117  Q
    ||||||||||||||||||||||||||   |||| ||||||| |||||||||||||||    
T  46402430 ctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaagaa 46402374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 175
Target Start/End: Complemental strand, 47070542 - 47070402
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga-agaacatttagataaattact 134  Q
    |||||||||||||| | || || || ||||| |||||||| |||||| |||||||||| || |||| |||| |||||| ||  ||   |  | |||||||    
T  47070542 ctcggcagttaactacggatgttttcctcggaagttaactacagccgaatttctaaaaatttggcagttaattgccgatagggcaaaaacgtcaattact 47070443  T
Q  135 cgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||| || || ||||||||||||| ||||| ||||||||    
T  47070442 cgtgtgccacagtcttatgcaatgtgggaacaacaattctc 47070402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 50216876 - 50216928
Alignment:
Q  59 tttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgcc 111  Q
    ||||||||||||||||||||||||||||| |||  | |||||| |||||||||    
T  50216876 tttctcggcagttaactgcagccggatttttaattcctcggcagttaactgcc 50216928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 175
Target Start/End: Complemental strand, 52387831 - 52387719
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtgag 162  Q
    |||| ||||||||||  |||| || ||||||||||| || |||||||||||||  |||||   |||| ||||| ||||||| | ||||||| ||||||      
T  52387831 tcggtagttaactgccaccggtttactaaaacttcgacagttaactgccgaagggcattttcgtaaaatactcatgtggcacaaccttatgtaatgtgca 52387732  T
Q  163 aacatcaattctc 175  Q
    |||| ||||||||    
T  52387731 aacagcaattctc 52387719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 596832 - 596781
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||| ||||  |||||||||||| |||| ||||||    
T  596832 ctcggcagttaactgcagccgaatttacaaaacttcggcagttaattgccga 596781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 2267078 - 2267031
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    ||||| |||||||||||||||||| |||||||||||| || |||||||    
T  2267078 ctcggtagttaactgcagccggatatctaaaacttcgacaattaactg 2267031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 2645532 - 2645417
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaa-cttcggcatttaactgccgaagaacatttagataaatta 132  Q
    ||||||| |||||||| | || || || |||||| ||||||||| ||||| || |||||| |||||||| ||||||||||| | ||||||   ||| |||    
T  2645532 tcctcggtagttaactgccgaggttttcctcggctgttaactgccgccggtttcctaaaaacttcggcagttaactgccgagggacatttgtgtaattta 2645433  T
Q  133 ctcgtgtggcaaagcc 148  Q
    || |||||||| ||||    
T  2645432 cttgtgtggcatagcc 2645417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 3948804 - 3948725
Alignment:
Q  35 cctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccga 113  Q
    ||||||||||||||| |||| | ||| ||||| |||||||||| ||||| || || ||||| |||||| |||||||||||    
T  3948804 cctcggcagttaactactgaggaattcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccga 3948725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 3953212 - 3953271
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaa 93  Q
    |||||||||||||||||| || || || |||||||||||||||| ||||| || ||||||    
T  3953212 tcctcggcagttaactcccgaggttttcctcggcagttaactgccgccggtttcctaaaa 3953271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 11248630 - 11248492
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || |||||||||||||||||||||| ||  |||   |||| || ||||||||||| || |||||  |||| ||||    
T  11248630 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcgacagttaactgccgaggagcatttgaataatttac 11248534  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||| ||||| ||||  |   |||||| ||||||||||||||    
T  11248533 tcgtatggcatagccaaaccaaatgtgggaacatcaattctc 11248492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 13743341 - 13743290
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||||||||| ||  | |||||| |||||||||||    
T  13743341 ctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 13743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 13747716 - 13747794
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | || || || ||| ||||||||||||||||||||||| ||  | |||||| |||||||||||    
T  13747716 tcctcggcagttaactac-gaggttttcctcagcagttaactgcagccggatttcaaattcatcggcagttaactgccga 13747794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 34691701 - 34691622
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | || || || |||| ||||||||||||||||||||| ||   | |||||| |||||||||||    
T  34691701 tcctcggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttatttcctcggcagttaactgccga 34691622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 140
Target Start/End: Complemental strand, 41612441 - 41612338
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcg 136  Q
    ||||||||||||| | || | | | ||||| |||||||||| ||||  |||||||||||||| || ||||||||| |   |||||||  |||||||||||    
T  41612441 tcggcagttaactgccgaggaaatcctcggtagttaactgccgccgattttctaaaacttcgacagttaactgccaatagacatttatgtaaattactcg 41612342  T
Q  137 tgtg 140  Q
    ||||    
T  41612341 tgtg 41612338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 41844361 - 41844476
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || || || |||||||||||||||| ||||| || || |||||||||||| || ||| |||||   |||||   ||| |||    
T  41844361 tcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttcctaaaaacttcggcaatttactaccgaaaggcatttccgtaactta 41844460  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  41844461 ctcgtgtggcacagcc 41844476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 49265836 - 49265789
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    ||||| |||||||| ||||||| ||||||||||||||||| |||||||    
T  49265836 ctcggaagttaactacagccggttttctaaaacttcggcaattaactg 49265789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 11094168 - 11094107
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    ||||| || ||||||||||||||||||| | ||||||||||||||||||  ||||| ||||||    
T  11094168 gaagttttcctcggcagttaactgcagc-gtatttctaaaacttcggcagataactaccgaag 11094107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 139
Target Start/End: Complemental strand, 34645635 - 34645533
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcg 136  Q
    ||||||||||||| | || || || ||||  |||||||||||| ||| |||  | ||  |||||| ||||||||||||| | |||||| |||||||||||    
T  34645635 tcggcagttaactgccgaggttttcctcgagagttaactgcagtcggttttgaagaaactcggcagttaactgccgaaggatatttaggtaaattactcg 34645536  T
Q  137 tgt 139  Q
    |||    
T  34645535 tgt 34645533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 42900224 - 42900138
Alignment:
Q  63 tcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    ||||||||||||||| ||||| || || |||||||| ||| |||||||||||||  ||||| | ||  |||||||||||||| ||||    
T  42900224 tcggcagttaactgccgccggtttactcaaaacttcagcagttaactgccgaagggcattttggtattttactcgtgtggcacagcc 42900138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 43476170 - 43476124
Alignment:
Q  130 ttactcgtgtggcaaagccttatgcaatgtgagaacatcaattctcc 176  Q
    |||||||||||||| | ||||||| |||||||||||| |||||||||    
T  43476170 ttactcgtgtggcacaaccttatgtaatgtgagaacaacaattctcc 43476124  T

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Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 10492870 - 10492919
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    |||||||||||||||| | ||||| || |||||||||||| |||||||||    
T  10492870 tcctcggcagttaactgccgaagttttcctcggcagttaattgcagccgg 10492919  T

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Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 17568010 - 17568063
Alignment:
Q  87 tctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    ||||||| |||| || ||||||||||| | ||||||||||||||||| ||||||    
T  17568010 tctaaaatttcgacagttaactgccgagggacatttagataaattacccgtgtg 17568063  T

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Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 19842576 - 19842499
Alignment:
Q  38 cggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    ||||||||||||   ||||| || ||| |||||||||||||||||  | | ||||| ||||||| |||||||||||||    
T  19842576 cggcagttaactgtcgaagttttcctcagcagttaactgcagccgattctttaaaatttcggcagttaactgccgaag 19842499  T

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Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 24700797 - 24700692
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| | || |  || ||||| ||||||||||| ||||||||||||  | ||| || ||||||||||| || |||||   ||| ||||    
T  24700797 tcctcggcagttaactaccgaggatttcctcgggagttaactgcaaccggatttctaattcctcgacagttaactgccgatgagcatttgagtaatttac 24700698  T
Q  134 tcgtgt 139  Q
    ||||||    
T  24700697 tcgtgt 24700692  T

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Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 34648166 - 34648250
Alignment:
Q  1 tgagagagcttctgccaga--tttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    |||||||||||||||||||  ||||||||| ||||||||| ||| || ||| | || || || |||||  |||||||||||||||    
T  34648166 tgagagagcttctgccagaattttgtagcataagatcctcagcaatttactgccgaggttttcctcggtcgttaactgcagccgg 34648250  T

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Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 12898687 - 12898798
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || ||||||| |||||||||||||| ||  |||   ||||||| ||||||| ||| |  ||||| | ||||||||    
T  12898687 tcctcggtagtttactaccgaagttttcctcggcaattaactgcagccggtttcataa---ttcggcagttaactgtcgaggggcatttgggtaaattac 12898783  T
Q  134 tcgtgtggcaaagcc 148  Q
    |||||||||| ||||    
T  12898784 tcgtgtggcatagcc 12898798  T

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Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 19440329 - 19440253
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||| | || || || |||||||||||||||||||||| ||   ||  |||||||| |||||||||||    
T  19440329 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttatgaattcttcggcagttaactgccga 19440253  T

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Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 20918009 - 20918061
Alignment:
Q  35 cctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt 87  Q
    ||||||||||||||| | || || || ||||||||||||||| ||||||||||    
T  20918009 cctcggcagttaactaccgaggttttcctcggcagttaactgtagccggattt 20918061  T

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Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 20926971 - 20927023
Alignment:
Q  35 cctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt 87  Q
    ||||||||||||||| | || || || ||||||||||||||| ||||||||||    
T  20926971 cctcggcagttaactaccgaggttttcctcggcagttaactgtagccggattt 20927023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 23443130 - 23443182
Alignment:
Q  61 tctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||||||||||| ||| ||  | |||||| |||||||||||    
T  23443130 tctcggcagttaactgcagccggaattcaaattcctcggcagttaactgccga 23443182  T

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Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 32743255 - 32743195
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacattt 122  Q
    ||||||||||||||||||| || | | ||||| ||||||| ||||||||||| | ||||||    
T  32743255 ctcggcagttaactgcagctggttctttaaaatttcggcaattaactgccgatggacattt 32743195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 45075422 - 45075334
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacattt 122  Q
    |||||||||||||||| |  |||| || |||||||||||||| ||||||  | | ||||| ||||||| |||||| |||| || |||||    
T  45075422 tcctcggcagttaactgccaaagttttcctcggcagttaactccagccgattctttaaaatttcggcagttaactaccgaggagcattt 45075334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 48566454 - 48566498
Alignment:
Q  93 acttcggcatttaactgccgaagaacatttagataaattactcgt 137  Q
    |||||| || |||||||||||||| || |||||||||||||||||    
T  48566454 acttcgacagttaactgccgaagagcacttagataaattactcgt 48566498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 85)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 22550862 - 22551003
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| | || || || |||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||||    
T  22550862 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaagggcatttaggtaaattac 22550961  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||| ||||||||  ||||||  |||| ||||||||    
T  22550962 tcgtgtggcacagccttatcaaatgtgtaaacaacaattctc 22551003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 26451589 - 26451499
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaa 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | || || || |||||||||||||| |||||| ||||||||    
T  26451589 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactacagccgaatttctaa 26451499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 41858087 - 41858197
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggc 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| || |  || |||||||||||||||||||||| |||  ||  ||||| |    
T  41858087 tgagagagcttctgccagatttgtagcagaagatcctcgacagttaactcccgagg--ttcctcggcagttaactgcagccggtttttgaattcttcgcc 41858184  T
Q  101 atttaactgccga 113  Q
    | |||||||||||    
T  41858185 agttaactgccga 41858197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 39601780 - 39601705
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    |||||||||||||||||| || || || |||||||||||||||||||||||||||||||||||||||| |||||||    
T  39601780 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactg 39601705  T

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Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18441405 - 18441479
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaact 75  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| | || || |||||||||||||||||    
T  18441405 tgagagagtttctgccagatttgtagcagaagatcctcggcagttaactgccgaggtttttctcggcagttaact 18441479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 62 - 143
Target Start/End: Complemental strand, 22547517 - 22547436
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggca 143  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||  |||||||  ||||||||| |||||||    
T  22547517 ctcggtagttaactgcagccggatttctaaaacttcggcagttaactgccgaagggcatttaggcaaattactcatgtggca 22547436  T

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Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 20854659 - 20854552
Alignment:
Q  68 agttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtgagaacat 167  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||||| | |||| ||||||||||||||||||  |  ||||||||  |||||| |||||     
T  20854659 agttaactgccgccggttttctaaaacttcggcagttaactgccgagggacatgtagataaattactcgtgtttctcagccttatcaaatgtgtgaacaa 20854560  T
Q  168 caattctc 175  Q
    ||||||||    
T  20854559 caattctc 20854552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 34366984 - 34366845
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcg 136  Q
    ||||||||||||| | || || || ||||| |||||||||||||||||||| ||||||||||||| ||||||| ||| |  ||   || |   |||||||    
T  34366984 tcggcagttaactaccgaggttttcctcggaagttaactgcagccggatttataaaacttcggcagttaactgacgaggggcaaaaaggtcttttactcg 34366885  T
Q  137 tgtggcaaagccttatgcaatgtgagaacatcaattctcc 176  Q
    ||||||| ||||||||| |||||| |||||||||||||||    
T  34366884 tgtggcacagccttatgtaatgtgggaacatcaattctcc 34366845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 177
Target Start/End: Complemental strand, 45409919 - 45409804
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtga 161  Q
    |||||||||||||||| ||||  || |||||||||||||| |||||||||||||  |||||   |||| ||||||||||||| ||||||||| ||||||     
T  45409919 ctcggcagttaactgccgccgatttactaaaacttcggcagttaactgccgaagggcattttcgtaaagtactcgtgtggcacagccttatgtaatgtgt 45409820  T
Q  162 gaacatcaattctccc 177  Q
     |||| ||||||||||    
T  45409819 aaacagcaattctccc 45409804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 40740983 - 40740877
Alignment:
Q  33 atcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    ||||||||||||||||| | ||||| || |||||||||||||||||||||| | | ||||| ||||||| ||||||| ||||| | |||| | |||||||    
T  40740983 atcctcggcagttaactgccgaagttttcctcggcagttaactgcagccggttctttaaaatttcggcagttaactgtcgaaggatatttgggtaaatta 40740884  T
Q  133 ctcgtgt 139  Q
    |||||||    
T  40740883 ctcgtgt 40740877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 143
Target Start/End: Complemental strand, 44933935 - 44933826
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| |||||||||||||||||| ||||||||||| |  |||||   ||| ||||    
T  44933935 tcctcggtagtttactgcggaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttac 44933836  T
Q  134 tcgtgtggca 143  Q
    ||||||||||    
T  44933835 tcgtgtggca 44933826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 148
Target Start/End: Complemental strand, 28617625 - 28617530
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    ||||| || ||||||||||||||||||||| |||||||||||||||||| |||||||||||||   ||||   ||| |||||||||||||| ||||    
T  28617625 gaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagcc 28617530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 2335145 - 2335259
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| |||||||||||||||| | ||||||||||| |  |||||   ||| ||||    
T  2335145 tcctcggtagtttactaccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgaggggcatttgagtaatttac 2335244  T
Q  134 tcgtgtggcaaagcc 148  Q
    |||||||||| ||||    
T  2335245 tcgtgtggcacagcc 2335259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 10749671 - 10749812
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || |||||||||||||||| || || || |||||||||||||| |||||||||||||  |||||   |||| | |    
T  10749671 tcctcggtagtttactgcagaagttttcctcggcagttaactgccgctggtttactaaaacttcggcagttaactgccgaagggcattttcgtaaagttc 10749770  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||| | ||||||| ||||||  |||| ||||||||    
T  10749771 tcgtgtggcacaaccttatgtaatgtgtaaacagcaattctc 10749812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 36595943 - 36596032
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacattta 123  Q
    |||||||||||||||| || |||| || |||||||||||||||||||||| | | ||||| |||| || |||||||||||| ||||||||    
T  36595943 tcctcggcagttaactgcttaagttttcctcggcagttaactgcagccggttctttaaaatttcgacaattaactgccgaaaaacattta 36596032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 42602554 - 42602457
Alignment:
Q  16 cagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||| ||||||||||||||||||||||| | || || || ||||||||||||||||| |||| |||  ||  |||||||| |||||||||||    
T  42602554 cagatttgtatcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcatccggtttttgaattcttcggcagttaactgccga 42602457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 175
Target Start/End: Original strand, 34371872 - 34371984
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtgag 162  Q
    ||||||||| ||||| ||||| || |||||||||||||| |||||||| ||||  ||||||||||||||||| |||||| | | ||||||  ||||||      
T  34371872 tcggcagtttactgccgccggtttactaaaacttcggcagttaactgctgaagggcatttagataaattacttgtgtggaagaaccttatcaaatgtgta 34371971  T
Q  163 aacatcaattctc 175  Q
    |||| ||||||||    
T  34371972 aacaacaattctc 34371984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 27501676 - 27501597
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| |||||||||||||||| | |||||||||||    
T  27501676 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccga 27501597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 38604245 - 38604320
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| |||||||||||||||||| |||||||    
T  38604245 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactg 38604320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 5533024 - 5533098
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgc 110  Q
    ||||| |||| ||| | ||||| || ||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  5533024 ctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgc 5533098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 54 - 139
Target Start/End: Complemental strand, 7120956 - 7120871
Alignment:
Q  54 aagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    |||| ||||||||||| ||||||||||||| ||  | ||| ||| ||| ||||||||||||| | |||||||||||||||||||||    
T  7120956 aagtttttctcggcagctaactgcagccggtttctttaaaattcagcagttaactgccgaaggatatttagataaattactcgtgt 7120871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 43520773 - 43520878
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||||||| | ||||| || ||| |||||||||||||||||  | | ||||| ||||||| ||||||||||| ||||||||  |||| ||||    
T  43520773 tcctcggtagttaactgccgaagttttcctcagcagttaactgcagccgattctttaaaatttcggcagttaactgccgatgaacatttgaataatttac 43520872  T
Q  134 tcgtgt 139  Q
    ||||||    
T  43520873 tcgtgt 43520878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 44841890 - 44841947
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgc 110  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  44841890 gaagtttttctcggcagttaactgcaaccgtatttctaaaacttcggcagttaactgc 44841947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 44885767 - 44885686
Alignment:
Q  58 atttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    ||||||||||||||||||||| |||  |||||||||||||  || ||||||||||||  | ||||| |||||||||||||||    
T  44885767 atttctcggcagttaactgcaaccgattttctaaaacttcaacagttaactgccgaaagatatttaaataaattactcgtgt 44885686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3395975 - 3395927
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||    
T  3395975 tgagagagtttctgccatatttgtagcagaagatcctcggcagttaact 3395927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22547552 - 22547504
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  22547552 tgagagagcttctgccagatttgtagtagaagatcctcggtagttaact 22547504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38871882 - 38871834
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  38871882 tgagagagctcctgccagatttgtagcagaagatccttggcagttaact 38871834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 39831198 - 39831126
Alignment:
Q  68 agttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    |||||||||||||||| ||||||||| ||||||| |||||| |||| |  ||||||| |||||||||||||||    
T  39831198 agttaactgcagccggttttctaaaatttcggcagttaactaccgaggggcatttaggtaaattactcgtgtg 39831126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 15030960 - 15030845
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||||| || || || |||||||||||||||| ||||| || || |||||||||||| || ||| ||||||  |||||   ||| |||    
T  15030960 tcctcggcagttaactcccgaggttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaattta 15030861  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  15030860 ctcgtgtggcacagcc 15030845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 32584128 - 32584049
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| ||||||||||||||| || |||||| ||||    
T  32584128 tcctcggaagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactaccga 32584049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 41016490 - 41016415
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    |||||||||||||||| | || || || ||||||||||||||||||  |||||||||||||||||| | |||||||    
T  41016490 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagttggatttctaaaacttcggtagttaactg 41016415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 36127416 - 36127342
Alignment:
Q  66 gcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    |||||||||| ||||||| |||||||||||||| || |||||||||||   || ||||| |||||||||||||||    
T  36127416 gcagttaacttcagccggttttctaaaacttcgtcagttaactgccgagagacgtttaggtaaattactcgtgtg 36127342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 13782311 - 13782206
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| | ||||| || |||||||||||| ||||| ||| | | ||||| || |||| ||||||||||| | |||||||  ||| ||||    
T  13782311 tcctcggcagttaactgccgaagttttcctcggcagttaattgcagtcggttctttaaaattttggcagttaactgccgagggacatttaagtaatttac 13782212  T
Q  134 tcgtgt 139  Q
    ||||||    
T  13782211 tcgtgt 13782206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 175
Target Start/End: Original strand, 41250097 - 41250210
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtga 161  Q
    ||||||||| |||||||| |||||||||||||||||| || |||||| |||| |  ||   |  | ||||||||||||| || | ||||||||||||||     
T  41250097 ctcggcagtaaactgcagtcggatttctaaaacttcgacagttaactaccgaggggcaaaaacgtcaattactcgtgtgccacaaccttatgcaatgtgg 41250196  T
Q  162 gaacatcaattctc 175  Q
    ||||| ||||||||    
T  41250197 gaacaacaattctc 41250210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 39939243 - 39939287
Alignment:
Q  65 ggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    |||||||||||||||||||||||||||||||||| || |||||||    
T  39939243 ggcagttaactgcagccggatttctaaaacttcgacaattaactg 39939287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41274701 - 41274653
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  41274701 tgagagagcttctgccagatttatagtagaagattctcggcagttaact 41274653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 43363276 - 43363336
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||| || ||||| ||||||||||||||| |||||||||||||||||| |||| ||||||    
T  43363276 gaagttttcctcggtagttaactgcagccgtatttctaaaacttcggcagttaagtgccga 43363336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 184549 - 184664
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || || || |||||||||||||||| ||||| || || |||||||||||| || ||| ||||||  |||||   ||| |||    
T  184549 tcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaactta 184648  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  184649 ctcgtgtggcacagcc 184664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 7121783 - 7121862
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | ||||| || ||| |||||||||||||||||| | | ||||| |||| || |||||||||||    
T  7121783 tcctcggcagttaactgccgaagttttcctcagcagttaactgcagccggttctttaaaatttcgacagttaactgccga 7121862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 139
Target Start/End: Complemental strand, 16939446 - 16939351
Alignment:
Q  44 ttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    |||||| ||||||| || |||||||||||||||||||||| | | ||||| ||| ||| ||||||||||||    |||| | ||||||||||||||    
T  16939446 ttaactactgaagtcttcctcggcagttaactgcagccggttctttaaaatttcagcagttaactgccgaaaggtatttgggtaaattactcgtgt 16939351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 34235152 - 34235199
Alignment:
Q  66 gcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||| ||||| |||||||||||||||||| |||||||||||    
T  34235152 gcagttaactgtagccgaatttctaaaacttcggcagttaactgccga 34235199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 35962383 - 35962304
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||||| || || || ||||||||||||||| ||||||||||| ||  | ||| || |||||||||||    
T  35962383 tcctcggcagttaactcccgaggttttcctcggcagttaactgtagccggatttcaaattcctcgacagttaactgccga 35962304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 43262497 - 43262443
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttc 88  Q
    |||||||||||||||| | ||||| || ||||||||||||||||||| |||||||    
T  43262497 tcctcggcagttaactaccgaagttttcctcggcagttaactgcagctggatttc 43262443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 546418 - 546499
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    ||||| |||||||||||| || || || |||||||||||||   ||||| |||||||||||||||||| |||| || |||||    
T  546418 tcctcagcagttaactcccgaggttttcctcggcagttaacaatagccgaatttctaaaacttcggcagttaattgtcgaag 546499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 3696128 - 3696193
Alignment:
Q  95 ttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtg 160  Q
    ||||||| ||||||||||| |  ||||| ||||||||||||||||| || | ||||||||||||||    
T  3696128 ttcggcagttaactgccgaggggcatttcgataaattactcgtgtgacacaaccttatgcaatgtg 3696193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 13783112 - 13783185
Alignment:
Q  41 cagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaa 114  Q
    ||||||||| | ||||| || |||||||||||||||||||||| | | ||||| |||| || ||||||||||||    
T  13783112 cagttaactgccgaagttttcctcggcagttaactgcagccggttctttaaaatttcgacagttaactgccgaa 13783185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 28694126 - 28694049
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    |||||||||||||||||||||| |||   ||||||||||| ||||||||||| | ||||||   ||| ||||||||||    
T  28694126 ctcggcagttaactgcagccggttttactaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgt 28694049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 37779758 - 37779713
Alignment:
Q  4 gagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||||    
T  37779758 gagagcttctgtcagatttgtagcagaatatcctcgacagttaact 37779713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 43262404 - 43262359
Alignment:
Q  130 ttactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||||    
T  43262404 ttactcgtgtggcacagccttatgtaatgtgagaacaacaattctc 43262359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 486039 - 486131
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt-ctaaaacttcggcatttaactgccgaagaa 117  Q
    ||||||| |||||||||||||||| | || |||   ||||| ||||||||||||||||||||   |||| ||||| | |||||||||||||||    
T  486039 gcagaagttcctcggcagttaactaccgaggtaaacctcggtagttaactgcagccggatttgagaaaatttcggtagttaactgccgaagaa 486131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 28618436 - 28618547
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || ||||||| |||||||||||||| ||  |||   ||||||| |||||||||||||  ||||| | ||||||||    
T  28618436 tcctcggtagtttactaccgaagttttcctcggcatttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgggtaaattac 28618532  T
Q  134 tcgtgtggcaaagcc 148  Q
    | |||||||| ||||    
T  28618533 ttgtgtggcatagcc 28618547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 7344554 - 7344613
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaa 93  Q
    |||||||||||||||||| || || || |||||||||||||||| ||||| || ||||||    
T  7344554 tcctcggcagttaactcccgaggttttcctcggcagttaactgccgccggtttcctaaaa 7344613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 15033119 - 15033220
Alignment:
Q  10 ttctgccagatttgtag--cagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaa 106  Q
    |||||||||||||||||  |||| |||||||||||||||||| | || || |  |||||||||||| |||||||| |||| | |||| ||||||| ||||    
T  15033119 ttctgccagatttgtaggtcaga-gatcctcggcagttaactaccgaggtttccctcggcagttaattgcagccgaatttttcaaaatttcggcagttaa 15033217  T
Q  107 ctg 109  Q
    |||    
T  15033218 ctg 15033220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 17924280 - 17924339
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaa 93  Q
    |||||||||||||||| | || || ||||||||||||||||||| ||||| || ||||||    
T  17924280 tcctcggcagttaactaccgaggtttttctcggcagttaactgccgccggtttcctaaaa 17924339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 31745224 - 31745153
Alignment:
Q  68 agttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    ||||||||||||| |  ||||||||||||||||| |||||| ||||||   |||| | ||||||||||||||    
T  31745224 agttaactgcagctgtttttctaaaacttcggcagttaactaccgaagggtatttgggtaaattactcgtgt 31745153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 36677926 - 36678041
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||| ||||||||||| | || || || |||||||||||||||| ||||| || || |||||||||||| || ||| ||||||  |||||   ||| |||    
T  36677926 tccttggcagttaactaccgaggttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaactta 36678025  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  36678026 ctcgtgtggcacagcc 36678041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 42481637 - 42481558
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccg 112  Q
    |||||||||||||||| | || || || |||||||  ||||||| |||||||| || |||||||||||| ||||||||||    
T  42481637 tcctcggcagttaactaccgaggttttactcggcacctaactgccgccggattcctaaaaacttcggcaattaactgccg 42481558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 44050796 - 44050749
Alignment:
Q  128 aattactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    ||||||||||||| || |||||||||||||||| ||||| ||||||||    
T  44050796 aattactcgtgtgccacagccttatgcaatgtgggaacagcaattctc 44050749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 45066358 - 45066473
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||| | | || || || |||||||||||||||| ||||| || || |||||||||||| || ||| ||||||  |||||   ||| |||    
T  45066358 tcctcggcagttaattaccgaggttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaattta 45066457  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  45066458 ctcgtgtggcacagcc 45066473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 25588 - 25646
Alignment:
Q  90 aaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    |||||||||||| |||||||||||||  ||||| ||||  |||||||||||||| ||||    
T  25588 aaaacttcggcagttaactgccgaagggcattttgatattttactcgtgtggcacagcc 25646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 1114818 - 1114740
Alignment:
Q  35 cctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||| | || |  || ||||||||||||||||||||||||||| ||    |||||| |||||||||||    
T  1114818 cctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaatttctcggcagttaactgccga 1114740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 1116210 - 1116264
Alignment:
Q  59 tttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||||||||||||||||| ||  | ||| || |||||||||||    
T  1116210 tttctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccga 1116264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 7577682 - 7577728
Alignment:
Q  130 ttactcgtgtggcaaagccttatgcaatgtgagaacatcaattctcc 176  Q
    |||||||||||||| ||||||||| |||||| ||||| |||||||||    
T  7577682 ttactcgtgtggcacagccttatgtaatgtgggaacagcaattctcc 7577728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 16940273 - 16940378
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaaga-acatttagataaatta 132  Q
    |||||||||||||||| | ||| | || |||| |||||||||||| |||| | | ||||| ||||||| ||||||||| |||| |||||||  ||| |||    
T  16940273 tcctcggcagttaactgccgaaattttcctcgacagttaactgcaaccggttctttaaaatttcggcacttaactgcc-aagagacatttaagtaattta 16940371  T
Q  133 ctcgtgt 139  Q
    |||||||    
T  16940372 ctcgtgt 16940378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 18438707 - 18438661
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    ||||||||||||||| || || || ||||||||||||||||||||||    
T  18438707 tcggcagttaactcccgaggttttcctcggcagttaactgcagccgg 18438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 20859629 - 20859707
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    ||||| |||||| ||||||||| || |  ||||||||||| ||||||| ||| | |||||||| |||||| ||||||||    
T  20859629 ctcgggagttaaatgcagccggtttccacaaacttcggcagttaactgtcgagggacatttaggtaaattcctcgtgtg 20859707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 175
Target Start/End: Original strand, 34503087 - 34503197
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtga 161  Q
    ||||| ||||||||||||||||  ||| | || ||||||| ||||||||||| |   |||| | ||||||||||||||| || | ||||||||||||||     
T  34503087 ctcggtagttaactgcagccgg--ttccataa-ttcggcagttaactgccgaggggtatttcggtaaattactcgtgtgacacacccttatgcaatgtgt 34503183  T
Q  162 gaacatcaattctc 175  Q
     |||| ||||||||    
T  34503184 caacaacaattctc 34503197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 42485592 - 42485650
Alignment:
Q  90 aaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    ||||||||| || ||||||||||||| |||||| ||||  |||||||||||||| ||||    
T  42485592 aaaacttcgacagttaactgccgaaggacattttgatattttactcgtgtggcacagcc 42485650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 3641629 - 3641580
Alignment:
Q  126 taaattactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    ||||||||||||||| || ||||||||  |||||| ||||||||||||||    
T  3641629 taaattactcgtgtgccatagccttatcaaatgtgggaacatcaattctc 3641580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 4528277 - 4528220
Alignment:
Q  103 ttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtg 160  Q
    ||||||||||||| |||||| ||||||||||| ||||| || | | ||||||||||||    
T  4528277 ttaactgccgaaggacattttgataaattactagtgtgacacaactttatgcaatgtg 4528220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 5532476 - 5532423
Alignment:
Q  95 ttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    ||||||| |||||||||||||  ||||| | |||||||||||||||||| ||||    
T  5532476 ttcggcagttaactgccgaagggcatttgggtaaattactcgtgtggcatagcc 5532423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 21406343 - 21406294
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    |||||||||||||||| | ||||| || ||||| ||||||||||||||||    
T  21406343 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccgg 21406294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 21800835 - 21800786
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    |||||||||||||||| | ||||| || ||||| ||||||||||||||||    
T  21800835 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccgg 21800786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 34892806 - 34892887
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    |||||||||||||||| | ||||| || |||||||||||||||||| ||| | | ||||| ||||  | | |||||||||||    
T  34892806 tcctcggcagttaactgccgaagttttcctcggcagttaactgcagtcggttctttaaaatttcgaaagtcaactgccgaag 34892887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 36345930 - 36346007
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    ||||||||||||||||||||||   | | ||| ||||||| ||||||| ||||||||||||   ||| ||||||||||    
T  36345930 ctcggcagttaactgcagccggtgcttttaaatttcggcagttaactgtcgaagaacatttgagtaatttactcgtgt 36346007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 45252051 - 45252006
Alignment:
Q  95 ttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    ||||||| ||||||||||| |||||||| ||||||||||| |||||    
T  45252051 ttcggcagttaactgccgatgaacattttgataaattactagtgtg 45252006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 3085589 - 3085529
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacattt 122  Q
    |||||||||||||||||||||| | | ||||| ||||| | |||||| |||| ||||||||    
T  3085589 ctcggcagttaactgcagccggttctttaaaatttcggtagttaactaccgaggaacattt 3085529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 6269000 - 6268936
Alignment:
Q  95 ttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgt 159  Q
    ||||||| ||||| | ||| | |||||| ||||||||||||||||| || | |||||||||||||    
T  6269000 ttcggcagttaaccgtcgagggacatttcgataaattactcgtgtgacacaaccttatgcaatgt 6268936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 38603328 - 38603280
Alignment:
Q  95 ttcggcatttaactgccgaagaacatttagataaattactcgtgtggca 143  Q
    ||||||| ||||||||||| |||||||||  ||| ||||||||||||||    
T  38603328 ttcggcagttaactgccgaggaacatttaagtaatttactcgtgtggca 38603280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 39491156 - 39491077
Alignment:
Q  61 tctcggcagttaactgcagccggatttcta-aaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    |||||| ||||||||| |||||| |||||| ||| |||| || ||||||||||||  |||||||  |||||||||||||||    
T  39491156 tctcggaagttaactgtagccgg-tttctataaaattcgacagttaactgccgaaagacatttatgtaaattactcgtgtg 39491077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 40077248 - 40077300
Alignment:
Q  35 cctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt 87  Q
    ||||||||||||||| | || || || |||||||||||||||||| |||||||    
T  40077248 cctcggcagttaactaccgaggttttcctcggcagttaactgcagtcggattt 40077300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 40745339 - 40745383
Alignment:
Q  95 ttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    ||||||| ||||||||||| | |||||| ||||||||||||||||    
T  40745339 ttcggcagttaactgccgagggacatttggataaattactcgtgt 40745383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 91
Target Start/End: Original strand, 41276882 - 41276914
Alignment:
Q  59 tttctcggcagttaactgcagccggatttctaa 91  Q
    |||||||||||||||||||||||| ||||||||    
T  41276882 tttctcggcagttaactgcagccgaatttctaa 41276914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 44727510 - 44727589
Alignment:
Q  42 agttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacattt 122  Q
    |||||||| | ||||| || ||||| |||||||||||||| | ||| | ||||||||||| |||| |||||||| ||||||    
T  44727510 agttaactaccgaagttttcctcggtagttaactgcagcc-gttttttcaaacttcggcagttaattgccgaaggacattt 44727589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 45454459 - 45454403
Alignment:
Q  57 tatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||| ||||||||||||||||| ||||||||| ||  | |||||| |||||||||||    
T  45454459 tattcctcggcagttaactgcatccggatttcaaattcctcggcagttaactgccga 45454403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 12361 - 12466
Alignment:
Q  10 ttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    |||||||||||||||||||||||||||||||||||||||| | || || ||  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  12361 ttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcatcggcagttaactgcagccggatttctaaaacttcggcagttaactg 12460  T
Q  110 ccgaag 115  Q
    ||||||    
T  12461 ccgaag 12466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 10729 - 10622
Alignment:
Q  33 atcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    ||||||||||||||||| | || || |  |||||||||||||||| ||||| || |||||||||||||| |||| ||||||||  ||||||  ||| |||    
T  10729 atcctcggcagttaactaccgaggtttccctcggcagttaactgccgccggtttactaaaacttcggcagttaattgccgaagggcatttaagtaattta 10630  T
Q  133 ctcgtgtg 140  Q
    ||||||||    
T  10629 ctcgtgtg 10622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 3e-36; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 17834563 - 17834422
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| | ||||| || |||||||||||||||| ||||| || |||||||||||||| |||||||||||||  |||||  |||||||||    
T  17834563 tcctcggcagttaactaccgaagttttcctcggcagttaactgccgccggtttactaaaacttcggcagttaactgccgaagggcattttcataaattac 17834464  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||| ||||||||| ||||||  |||||||||||||    
T  17834463 tcgtgtggcacagccttatgtaatgtgtaaacatcaattctc 17834422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 17838750 - 17838645
Alignment:
Q  10 ttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    |||||||||||||||||||||||||| |||||||||||||   || || || ||||| |||| ||||||||||||||||||||||||||||| |||||||    
T  17838750 ttctgccagatttgtagcagaagatcgtcggcagttaactatcgaggttttcctcggtagtttactgcagccggatttctaaaacttcggcagttaactg 17838651  T
Q  110 ccgaag 115  Q
    ||||||    
T  17838650 ccgaag 17838645  T

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Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 17840887 - 17841001
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| | || || || |||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||   ||| ||||    
T  17840887 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttctaaaacttcggcagttaactgccgatgaacatttgagtaatttac 17840986  T
Q  134 tcgtgtggcaaagcc 148  Q
    |||||||||| ||||    
T  17840987 tcgtgtggcacagcc 17841001  T

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Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 30355203 - 30355284
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | || || || |||||||||||||||||||||    
T  30355203 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 30355284  T

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Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 40587770 - 40587680
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaa 91  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||||| |||| || || |||| ||||||||||||| |||||||||||    
T  40587770 tgagagagcttctttcagatttatagcataagatcctcggcagttaactactgaggttttcctcgacagttaactgcagtcggatttctaa 40587680  T

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Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 41047886 - 41047812
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaact 75  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||| | ||||| || ||||||||||||||    
T  41047886 tgagagagcttcctccagatttgtagcagaagatcctcggcagttaactaccgaagttttcctcggcagttaact 41047812  T

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Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 46738853 - 46738799
Alignment:
Q  59 tttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46738853 tttctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccga 46738799  T

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Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21188390 - 21188438
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21188390 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 21188438  T

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Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 7145 - 7031
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| |||||||||||||||| | ||||||||||| |  |||||   ||| ||||    
T  7145 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgaggggcatttgagtaatttac 7046  T
Q  134 tcgtgtggcaaagcc 148  Q
    |||||||||| ||||    
T  7045 tcgtgtggcacagcc 7031  T

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Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 36394902 - 36394980
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcag 79  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| | || || || ||||||| |||| |||||    
T  36394902 tgagagagcttctgccagatttgtagcagaagatcctcggtagttaactaccgaggttttcctcggcacttaattgcag 36394980  T

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Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 143
Target Start/End: Complemental strand, 27657086 - 27657005
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggca 143  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||| |  |||||  |||| ||||||||||||||    
T  27657086 ctcggcagttaactgcagccgtatttctaaaactttggcagttaactgccgaggggcatttgaataatttactcgtgtggca 27657005  T

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Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 28980136 - 28980221
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttc-tcggcagttaactgcagccggat 85  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||| | || || || | |||||||||||||||| ||||||    
T  28980136 tgagagagcttctgtcagatttgtagcagaaaatcctcggcagttaactaccgaggttttccttcggcagttaactgcatccggat 28980221  T

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Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 12210587 - 12210666
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||| |||| ||| | ||||| || |||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  12210587 tcctcggtagtttactgccgaagttttcctcggcagttaactgcggccgtatttctaaaacttcggcagttaactgccga 12210666  T

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Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 42682103 - 42682024
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagc 80  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||||| | | || || || |||||||||||||||||||    
T  42682103 tgagagaacttatgctagatttgtagcagaagatcctcggcagttaattaccgaggttttcctcggcagttaactgcagc 42682024  T

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Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 13921292 - 13921370
Alignment:
Q  65 ggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggca 143  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||| || |||||   ||| ||||||||||||||    
T  13921292 ggcagttaactgccgctggatttctaaaacttcggcagttaactgccgaggagcatttgagtaatttactcgtgtggca 13921370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 38555413 - 38555515
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcg 136  Q
    ||||||||||||| | ||||| || ||||||||||||||||||| || | | ||||| ||||||| ||||||||||||| | ||||   |||||||||||    
T  38555413 tcggcagttaactgccgaagttttcctcggcagttaactgcagctggttctttaaaatttcggcagttaactgccgaaggatatttgagtaaattactcg 38555512  T
Q  137 tgt 139  Q
    |||    
T  38555513 tgt 38555515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 45257029 - 45256923
Alignment:
Q  68 agttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtgagaacat 167  Q
    ||||| |||| ||||| || ||||||||||| || ||||||||||||| |||||||| |||||||||| ||||||| || |||||  ||||||  ||||     
T  45257029 agttagctgccgccggtttactaaaacttcgacaattaactgccgaaggacatttaggtaaattactcatgtggcacagtcttatcaaatgtgtaaacag 45256930  T
Q  168 caattct 174  Q
    |||||||    
T  45256929 caattct 45256923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 148
Target Start/End: Original strand, 46908498 - 46908584
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    ||||||||||||||||||||| ||||||||||||||| || |||||||||||     ||||| |||| |||||||||||||| ||||    
T  46908498 ctcggcagttaactgcagccgtatttctaaaacttcgacagttaactgccgagaggtatttaaataatttactcgtgtggcacagcc 46908584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 62 - 175
Target Start/End: Original strand, 45258029 - 45258142
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtga 161  Q
    ||||||||||||||||||||| |||||||||| ||  ||| ||||||||||| |  |||||   ||| |||||||||||||| ||||  ||  |||||||    
T  45258029 ctcggcagttaactgcagccgtatttctaaaatttatgcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaatcaaatgtga 45258128  T
Q  162 gaacatcaattctc 175  Q
    ||||| ||||||||    
T  45258129 gaacaacaattctc 45258142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 9367713 - 9367805
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt-ctaaaacttcggcatttaactgccgaagaa 117  Q
    ||||||| |||||||||||||||| | || || || ||||||||||||||||||||||||||    ||| ||||||| |||||||||||||||    
T  9367713 gcagaagttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagcaaatttcggcagttaactgccgaagaa 9367805  T

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Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 46863312 - 46863356
Alignment:
Q  5 agagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  46863312 agagcttctgccagatttgtagcagaagatcttcggcagttaact 46863356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 8044 - 8123
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| |||||||||||||| | | |||||||||||    
T  8044 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttctgtagttaactgccga 8123  T

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Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 140
Target Start/End: Original strand, 5541543 - 5541646
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcg 136  Q
    ||||||||||||| | || | | | ||||| |||||||||| ||||| |||||||||||| | || ||||||||| |||  ||||||| |||||||||||    
T  5541543 tcggcagttaactgccgaggaaatcctcgggagttaactgccgccggttttctaaaactttgacagttaactgccaaagggcatttaggtaaattactcg 5541642  T
Q  137 tgtg 140  Q
    ||||    
T  5541643 tgtg 5541646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 10098114 - 10098229
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||| ||||||||||| || || || |||||||||||||||||||||| || || |||||||||||| || ||| ||||||  |||||   ||| |||    
T  10098114 tcctcgtcagttaactcccgaggttttcctcggcagttaactgcagccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaactta 10098213  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  10098214 ctcgtgtggcacagcc 10098229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 42583057 - 42583136
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| ||||||||||||||  || |||||||||||    
T  42583057 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttctacagttaactgccga 42583136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 148
Target Start/End: Complemental strand, 10517067 - 10516981
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    |||| ||||||||||| ||||| || ||||||||||| || ||||||||| ||||||||||   |||| ||||||||||||| ||||    
T  10517067 ctcgacagttaactgctgccggtttactaaaacttcgacagttaactgccaaagaacattttcgtaaagtactcgtgtggcacagcc 10516981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 19804514 - 19804592
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    |||||||||||||||||||||| || |  ||||||||||| |||||| |||| |  ||||||| |||||||||||||||    
T  19804514 ctcggcagttaactgcagccggtttccacaaacttcggcagttaactaccgaggggcatttaggtaaattactcgtgtg 19804592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 34139978 - 34139932
Alignment:
Q  3 agagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||    
T  34139978 agagagcttctgccagatttgtagaggaagatcctcggcagttaact 34139932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 175
Target Start/End: Original strand, 26833500 - 26833609
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtgag 162  Q
    |||| ||||||||||||||||  ||||| || ||||||| ||||||||||| |  ||||| ||||||||||| |||| ||| ||||||||| ||||||      
T  26833500 tcggtagttaactgcagccgg--ttctataa-ttcggcagttaactgccgatgggcatttcgataaattactagtgtagcacagccttatgtaatgtgtc 26833596  T
Q  163 aacatcaattctc 175  Q
    |||| ||||||||    
T  26833597 aacaacaattctc 26833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 43 - 139
Target Start/End: Complemental strand, 13644488 - 13644392
Alignment:
Q  43 gttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    ||||||| | ||||| || ||||||| |||||||||||||| | | ||||| ||||||| |||||||||| || | |||| | ||||||||||||||    
T  13644488 gttaactgccgaagttttcctcggcatttaactgcagccggttctttaaaatttcggcagttaactgccgtaggatatttgggtaaattactcgtgt 13644392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 143
Target Start/End: Original strand, 7975634 - 7975716
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaa-cttcggcatttaactgccgaagaacatttagataaattactcgtgtggca 143  Q
    |||||||||||||||| ||||| || |||||| |||||||| || |||||||||| ||||||   |||| |||||||||||||    
T  7975634 ctcggcagttaactgccgccggtttactaaaaacttcggcagtttactgccgaaggacattttcgtaaagtactcgtgtggca 7975716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 9494804 - 9494882
Alignment:
Q  35 cctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||| ||||||||||| || || || |||||||||||||||||||||| ||| |||  | |||||| |||||||||||    
T  9494804 cctcgacagttaactcccgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaactgccga 9494882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 115
Target Start/End: Complemental strand, 42499486 - 42499404
Alignment:
Q  33 atcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    ||||||||||||||||| | || || || |||||||||||||||||| |||||||| ||  | |||||| ||||||| |||||    
T  42499486 atcctcggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttcaaattcctcggcaattaactgtcgaag 42499404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 18105449 - 18105360
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacattt 122  Q
    |||||||||||||||| | || || || |||||||||||||||| ||||| || || |||||||||||| || ||| |||||| ||||||    
T  18105449 tcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaaggacattt 18105360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 34139945 - 34139892
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    ||||||||||||||||||||||||||||||  |||||||| |||| | ||||||    
T  34139945 ctcggcagttaactgcagccggatttctaattcttcggcagttaattaccgaag 34139892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43686871 - 43686924
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctga 54  Q
    ||||||||||| || |||||||||||||||| || |||||||||||||| ||||    
T  43686871 tgagagagcttatgtcagatttgtagcagaaaattctcggcagttaactactga 43686924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 45364186 - 45364227
Alignment:
Q  3 agagagcttctgccagatttgtagcagaagatcctcggcagt 44  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  45364186 agagagcttctaccagatttgtagccgaagatcctcggcagt 45364227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 47521449 - 47521388
Alignment:
Q  78 agccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    |||||| ||||||||||||||||| |||||||||||    ||||||| ||||||||||||||    
T  47521449 agccggttttctaaaacttcggcagttaactgccgagaggcatttaggtaaattactcgtgt 47521388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 46907612 - 46907501
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || |||||||||||||||||||||| ||  |||   ||||||| |||||||||||||  |||||   ||| ||||    
T  46907612 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgagtaatttac 46907516  T
Q  134 tcgtgtggcaaagcc 148  Q
    |||||||||| ||||    
T  46907515 tcgtgtggcatagcc 46907501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 618750 - 618801
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||||||||| ||  | |||||| |||||||||||    
T  618750 ctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 618801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 14102345 - 14102420
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    |||||||||||||||| | ||||| || |||||||||||| ||||||||  | | ||||| ||||||| |||||||    
T  14102345 tcctcggcagttaactgccgaagttttcctcggcagttaattgcagccgattctttaaaatttcggcagttaactg 14102420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 14412362 - 14412437
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    |||||||||||||||| | ||||| || |||||||||||| ||||||||  | | ||||| ||||||| |||||||    
T  14412362 tcctcggcagttaactgccgaagttttcctcggcagttaattgcagccgattctttaaaatttcggcagttaactg 14412437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 27453619 - 27453670
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||||||||||||| |||  | |||||| |||||||||||    
T  27453619 ctcggcagttaactgcagccggatttttaattcctcggcagttaactgccga 27453670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 37345127 - 37345206
Alignment:
Q  61 tctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    |||||| |||||||||||| |||  | |  ||| |||| || ||||||||||||| |||||||| |||||||||||||||    
T  37345127 tctcgggagttaactgcagtcggtatccataaaattcgacagttaactgccgaaggacatttaggtaaattactcgtgtg 37345206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 41884123 - 41884238
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || || || |||||||||||||||| ||||| || || |||||||||| |   ||||||||||| ||||||   ||  |||    
T  41884123 tcctcggcagttaacttccgaggttttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaaggacattttcgtatttta 41884222  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  41884223 ctcgtgtggcacagcc 41884238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 48407284 - 48407363
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccg 112  Q
    |||||||||||||||| | || || || |||||||  ||||||||||||||||  | |||||||||||| ||||||||||    
T  48407284 tcctcggcagttaactaccgaggttttactcggcacctaactgcagccggattcataaaaacttcggcagttaactgccg 48407363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 10705322 - 10705276
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccg 82  Q
    ||||||||||||||||  | || ||||||||||||||||||||||||    
T  10705322 ctcggcagttaactcccaaggtttttctcggcagttaactgcagccg 10705276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 137
Target Start/End: Complemental strand, 12080436 - 12080394
Alignment:
Q  95 ttcggcatttaactgccgaagaacatttagataaattactcgt 137  Q
    ||||||| |||||| ||||||||||||| ||||||||||||||    
T  12080436 ttcggcagttaactaccgaagaacatttggataaattactcgt 12080394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 45361700 - 45361646
Alignment:
Q  59 tttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||||||||||| |||  | ||| || |||||||||||    
T  45361700 tttctcggcagttaactgcagccggatttttaattcctcgtcagttaactgccga 45361646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 11886882 - 11886986
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||||| |||||| | ||||| || ||| |||||||||||||||||| | | ||| | ||||||| |||| ||| |||| | |||| | ||||||||    
T  11886882 tcctcggca-ttaacttccgaagttttcctcagcagttaactgcagccggttctttaagatttcggcagttaattgctgaaggatatttgggtaaattac 11886980  T
Q  134 tcgtgt 139  Q
    ||||||    
T  11886981 tcgtgt 11886986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 29112449 - 29112400
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    ||||| |||||||||| | ||||| || ||||||||||||||||||||||    
T  29112449 tcctcagcagttaactgccgaagttttcctcggcagttaactgcagccgg 29112400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 34738440 - 34738383
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaa 91  Q
    |||||||||||||||| | || || || ||||||| |||||||||||| |||||||||    
T  34738440 tcctcggcagttaactaccgaggttttcctcggcatttaactgcagccagatttctaa 34738383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 12081251 - 12081295
Alignment:
Q  95 ttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    ||||||| |||||||||||||  ||||| ||||||||||||||||    
T  12081251 ttcggcaattaactgccgaagggcatttggataaattactcgtgt 12081295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 20564247 - 20564191
Alignment:
Q  62 ctcggcagttaactgcagccggattt-ctaaaacttcggcatttaactgccgaagaa 117  Q
    |||||||||||||||| |||||||||   |||| ||||||| |||||||||||||||    
T  20564247 ctcggcagttaactgctgccggatttgagaaaatttcggcagttaactgccgaagaa 20564191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28115496 - 28115544
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||| ||| ||||||||||||||||| ||||  |||||||||    
T  28115496 tgagagagcttatgctagatttgtagcagaagaccctcaacagttaact 28115544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 37340377 - 37340329
Alignment:
Q  35 cctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    ||||||||||||||| | || || |||||||||||||||||||| ||||    
T  37340377 cctcggcagttaactaccgaggtttttctcggcagttaactgcaaccgg 37340329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 48269750 - 48269710
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggc 41  Q
    ||||||| ||| || ||||||||||||||||||||||||||    
T  48269750 tgagagaacttttgtcagatttgtagcagaagatcctcggc 48269710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 542754 - 542894
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctga-agtatttctcggcagttaactgcagccggatttctaaaacttcgg 99  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | || ||| || ||||||||||| ||||||||||||||||||  | |||     
T  542754 tgagagaacttctgccagatttgtagcagaagatcctcggcagttaactaccgagagt-ttcctcggcagttagctgcagccggatttctaattcctcga 542852  T
Q  100 catttaactgccga-agaacatttagataaattactcgtgtg 140  Q
    || |||||||||||  |||||||||| |||||||||||||||    
T  542853 cagttaactgccgatggaacatttaggtaaattactcgtgtg 542894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 11346107 - 11346008
Alignment:
Q  10 ttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    |||||||||||||||||||||||||||||| ||||||||| | || || || ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  11346107 ttctgccagatttgtagcagaagatcctcgacagttaactaccgaggttttcctcggcagttaactgcagctggatttctaaaacttcggcagttaactg 11346008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 7762241 - 7762382
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||||||||||||||||| || || |||| |||||||||||| ||| |||||||||||||||||| ||||||||||| |  ||   |  | ||||||    
T  7762241 tcctcggcagttaactcctgaggttttcctcgacagttaactgcaaccgaatttctaaaacttcggcagttaactgccgaggggcaaaaacgtcaattac 7762340  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||| ||||||||| |||||| ||||| ||||||||    
T  7762341 tcgtgtggcacagccttatgtaatgtgggaacagcaattctc 7762382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 20192462 - 20192381
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccg 82  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||   ||||| || |||||||||||||||||||||    
T  20192462 tgagagagcttctgccagatttgtagcagaagatcctcggcatttaactatcgaagttttcctcggcagttaactgcagccg 20192381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 18307363 - 18307249
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggc 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| | || || || |||||||||||||| ||||||  ||| |||  | ||| |    
T  18307363 tgagagggcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactacagccgattttttaattcctcgac 18307264  T
Q  101 atttaactgccgaag 115  Q
    | |||||||||||||    
T  18307263 agttaactgccgaag 18307249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 42912878 - 42913016
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcg 136  Q
    ||||||||||||| | ||||| || ||||| |||||||||| ||||| || ||||||||||| || |||||| ||||||  |||||| ||||| ||||||    
T  42912878 tcggcagttaactgccgaagttttcctcggtagttaactgccgccggtttactaaaacttcgacaattaactaccgaagggcatttaaataaaatactcg 42912977  T
Q  137 tgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    ||||||| ||||||||  ||||||  |||| ||||||||    
T  42912978 tgtggcacagccttatcaaatgtgtaaacagcaattctc 42913016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 62 - 175
Target Start/End: Original strand, 14688 - 14801
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtga 161  Q
    |||||||||||||| |||||| |||||||||||||||||| ||||||||||||| ||||||   ||| |||||||||||||| | ||||||  ||||||     
T  14688 ctcggcagttaactacagccgtatttctaaaacttcggcagttaactgccgaaggacatttgagtaatttactcgtgtggcacaaccttatcaaatgtgt 14787  T
Q  162 gaacatcaattctc 175  Q
     |||| ||||||||    
T  14788 aaacagcaattctc 14801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 35564370 - 35564232
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggc 100  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||| | || | |   ||||||| ||||||||||| || |   | ||| ||||||    
T  35564370 tgagagagcttatgccagatttgtagcagaagatcctcagcagttaactaccgaggaaaacctcggcaattaactgcagctggttccttcaaaattcggc 35564271  T
Q  101 atttaactgccgaagaacatttagataaattactcgtgt 139  Q
    | ||||||||||||||| ||||   ||||||||||||||    
T  35564270 agttaactgccgaagaatatttgagtaaattactcgtgt 35564232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 11348500 - 11348577
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||   ||| ||||||||||    
T  11348500 ctcggcagttaactgcatccggatttctaaaacttcggcagttaactgccgaggaacatttgagtaatttactcgtgt 11348577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 19037459 - 19037551
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt-ctaaaacttcggcatttaactgccgaagaa 117  Q
    |||||||||||||||||||||||| | || || || ||||||||||||||||||||||||||   |||| ||||||| |||||||||||||||    
T  19037459 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaagaa 19037551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 25497620 - 25497540
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagcc 81  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||| | ||  | || ||||||||||||||||||||    
T  25497620 tgagagagcttctgcctgatttgtagcagaagattctcggcagttaactaccgagattttcctcggcagttaactgcagcc 25497540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 30708983 - 30708895
Alignment:
Q  30 aagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaa 117  Q
    |||||||||||||||||||||| || || |  |||||||||||||||||||||||||| | |||| ||||||| |||||||||||||||    
T  30708983 aagatcctcggcagttaactcccgaggtttccctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaagaa 30708895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 7757401 - 7757326
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    ||||||||||||||||   || || || |||||||||||||||||||||||||||||||||||||||| |||||||    
T  7757401 tcctcggcagttaactagcgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactg 7757326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 8539541 - 8539592
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8539541 ctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccga 8539592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42865768 - 42865816
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42865768 tgagagagcttctgccagatttgtagcagaagatcctcggcaattaact 42865816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 8018 - 8128
Alignment:
Q  10 ttctgccagatttgtagc--agaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaa-acttcggcatttaa 106  Q
    ||||||||||||||||||  || |||||||||| |||||||| | ||  | || ||||||||||||||||| ||| ||||||||| | |||||||||||     
T  8018 ttctgccagatttgtagcgcaggagatcctcggtagttaactaccgagattttcctcggcagttaactgcaaccgtatttctaaatatttcggcatttag 8117  T
Q  107 ctgccgaagaa 117  Q
    |||||||||||    
T  8118 ctgccgaagaa 8128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 3891531 - 3891480
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  3891531 ctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccga 3891480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 37 - 140
Target Start/End: Original strand, 38408467 - 38408570
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcg 136  Q
    ||||||||||||| | || | | | ||||| |||||||||| | ||| ||||||||||||||||| |||| ||||||||  ||||||| |||||||||||    
T  38408467 tcggcagttaactgccgaggaaatcctcgggagttaactgccgtcggttttctaaaacttcggcagttaattgccgaagggcatttaggtaaattactcg 38408566  T
Q  137 tgtg 140  Q
    ||||    
T  38408567 tgtg 38408570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 43094601 - 43094648
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  43094601 ctcggcagttaactgcagccggatttctaaaacttcggcagttaactg 43094648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 5200381 - 5200459
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    ||||| |||||||||||||||  |||||||||||||| || |||||| |||| |||||||||| ||||||||| |||||    
T  5200381 ctcgggagttaactgcagccgattttctaaaacttcgacagttaactaccgatgaacatttaggtaaattacttgtgtg 5200459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 18512652 - 18512753
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcg 136  Q
    |||||||||| || ||||  | || |||||||||||||||||||||| |||   ||||||||||| |||||||||||||| ||||||| ||| |||||||    
T  18512652 tcggcagttagctgctgagattttcctcggcagttaactgcagccggttttactaaacttcggcagttaactgccgaagagcatttag-taatttactcg 18512750  T
Q  137 tgt 139  Q
    |||    
T  18512751 tgt 18512753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 30705185 - 30705071
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaa-cttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtg 160  Q
    ||||| |||||||||| ||||| || |||||| |||||||| |||||||| ||||  ||||||  ||||| |||||||||||| ||||||||| ||||||    
T  30705185 ctcggtagttaactgccgccggtttactaaaaacttcggcagttaactgctgaagggcatttacgtaaatgactcgtgtggcacagccttatgaaatgtg 30705086  T
Q  161 agaacatcaattctc 175  Q
      |||| ||||||||    
T  30705085 taaacaacaattctc 30705071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 30192568 - 30192487
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    |||||||||||||||| | ||||| || |||| ||||||||||||||||| | | ||||| ||||||| |||||||||||||    
T  30192568 tcctcggcagttaactgccgaagttttcctcgacagttaactgcagccggttctttaaaatttcggcagttaactgccgaag 30192487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 35671158 - 35671053
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| |  |||| || |||||||||||||||||||||| | | ||||| |||| || |||| |||||| |||||||||  ||| ||||    
T  35671158 tcctcggcagttaactgccaaagttttcctcggcagttaactgcagccggttctttaaaatttcgacagttaattgccgaggaacatttaagtaatttac 35671059  T
Q  134 tcgtgt 139  Q
    ||||||    
T  35671058 tcgtgt 35671053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 8680301 - 8680381
Alignment:
Q  95 ttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    ||||||| |||||||||||||  ||||| | ||||||||||||||| || ||||||||||||||||  |||| ||||||||    
T  8680301 ttcggcagttaactgccgaagggcatttgggtaaattactcgtgtgacacagccttatgcaatgtgtcaacaacaattctc 8680381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 18512282 - 18512202
Alignment:
Q  59 tttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    ||||||||||||||||||||||||| |||   ||||||||||| ||||||||||| || |||||  |||| ||||||||||    
T  18512282 tttctcggcagttaactgcagccggttttactaaacttcggcagttaactgccgatgagcatttgaataatttactcgtgt 18512202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 13837800 - 13837685
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || || || |||||||||||||||| ||||| || || |||||||||||| || ||||||||||  |||||   |||| ||    
T  13837800 tcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttactaaaaacttcggcagtttactgccgaagggcatttttgtaaagta 13837701  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  13837700 ctcgtgtggcacagcc 13837685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 5847 - 5773
Alignment:
Q  39 ggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||| | || || || ||||||| |||||||||| || |||||||||||||||||| |||||||||||    
T  5847 ggcagttaactaccgaggttttcctcggcaattaactgcagtcgtatttctaaaacttcggcagttaactgccga 5773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 27673706 - 27673791
Alignment:
Q  90 aaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||||| ||||||||| |||| ||||||  ||||| |||||||||||| ||||||||  ||||||  |||| ||||||||    
T  27673706 aaaacttcggcagttaactgccaaagagcatttacgtaaatgactcgtgtggcatagccttatcaaatgtgtaaacaacaattctc 27673791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 34122600 - 34122519
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    |||||||||||||||| | ||  | || ||||||||||||||||||||||||||| ||  | |||||| |||||||||||||    
T  34122600 tcctcggcagttaactaccgagcttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaag 34122519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 43094053 - 43094009
Alignment:
Q  65 ggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||    
T  43094053 ggcagttaactgcagccggatttctaaaatttcggcagttaactg 43094009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 3600438 - 3600367
Alignment:
Q  9 cttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagc 80  Q
    |||||| |||||||||||||||||||||||||| |||||||   || || || || ||||||||||||||||    
T  3600438 cttctgtcagatttgtagcagaagatcctcggctgttaactatcgaggttttccttggcagttaactgcagc 3600367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 511043 - 510993
Alignment:
Q  89 taaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    ||||| ||||||| ||||||  |||||||||||||||||||||||||||||    
T  511043 taaaaattcggcagttaactatcgaagaacatttagataaattactcgtgt 510993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 11699305 - 11699259
Alignment:
Q  129 attactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    ||||||||||||||| | ||||||| |||||||||||||||||||||    
T  11699305 attactcgtgtggcacaaccttatgtaatgtgagaacatcaattctc 11699259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 8576972 - 8577025
Alignment:
Q  65 ggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaa 117  Q
    ||||||||||||||||||||||| | |||| ||||||| |||||||||||||||    
T  8576972 ggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaagaa 8577025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 25877697 - 25877617
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    |||||||||||||||| | ||||| || |||||||||||| ||||||||| |||| ||  | ||||||||||| ||||||||    
T  25877697 tcctcggcagttaactaccgaagttttcctcggcagttaattgcagccgg-tttcgaattcctcggcatttaattgccgaag 25877617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 140
Target Start/End: Original strand, 38971649 - 38971726
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    ||||||||||||||||||||| || |  ||| ||||| | |||||||||||||  ||||||| ||||||| |||||||    
T  38971649 tcggcagttaactgcagccggtttccacaaaattcgggagttaactgccgaagggcatttaggtaaattagtcgtgtg 38971726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 28880402 - 28880318
Alignment:
Q  30 aagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccga 113  Q
    |||||||||||||||||| | | || || || ||||||||||  |||||||||||||| | |||| ||||||| |||||||||||    
T  28880402 aagatcctcggcagttaattaccgaggttttcctcggcagtttgctgcagccggatttttcaaaatttcggcagttaactgccga 28880318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 8537265 - 8537226
Alignment:
Q  10 ttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  8537265 ttctggcagatttgtagcagaacatcctcggcagttaact 8537226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 18538334 - 18538381
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    |||||||||||||| | ||||| || ||||||||||||||||||||||    
T  18538334 ctcggcagttaactaccgaagttttcctcggcagttaactgcagccgg 18538381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 20744018 - 20744069
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||||||||  | | ||||||||||||| |||||||||||    
T  20744018 ctcggcagttaactgcagccgattctttaaaacttcggcagttaactgccga 20744069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 41798894 - 41798815
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||| ||||| | || || ||  |||||||||||||||||||||||||| ||  |||| ||| |||||||||||    
T  41798894 tcctcggcagataactaccgaggttttcttcggcagttaactgcagccggatttcaaattcttcagcagttaactgccga 41798815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 1397376 - 1397426
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||||||||||||||||  | || ||| |||||||||||    
T  1397376 tcggcagttaactgcagccggatttctaattcctcagcagttaactgccga 1397426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 41623052 - 41623126
Alignment:
Q  41 cagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    ||||||||| | |||||  | |||||||||| ||||||||||| | | ||||| ||||||| |||||||||||||    
T  41623052 cagttaactgccgaagttgtcctcggcagtttactgcagccggttctttaaaatttcggcagttaactgccgaag 41623126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 42937239 - 42937189
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||| ||||| ||||| ||||||||||| ||||| |||||    
T  42937239 tcggcagttaactgccgccggttttcttaaacttcggcagttaaccgccga 42937189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 2532595 - 2532640
Alignment:
Q  130 ttactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||||||| ||||||||| |||||| ||||| ||||||||    
T  2532595 ttactcgtgtggcacagccttatgtaatgtgggaacagcaattctc 2532640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 19041114 - 19041229
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttc--taaaacttcggcatttaactgccgaagaacatttagataaatt 131  Q
    |||||||||||||||| | || || ||  ||||||| ||||||| |||| |||||  ||||||||||| |   |||||||||||||||||| | ||  ||    
T  19041114 tcctcggcagttaactaccgaggttttcttcggcagctaactgccgccg-atttcgttaaaacttcggtagcaaactgccgaagaacattttggtatttt 19041212  T
Q  132 actcgtgtggcaaagcc 148  Q
    |||||||||||| ||||    
T  19041213 actcgtgtggcacagcc 19041229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 91
Target Start/End: Original strand, 30887385 - 30887414
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaa 91  Q
    ||||||||||||||||||||||||||||||    
T  30887385 ctcggcagttaactgcagccggatttctaa 30887414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 34123933 - 34123986
Alignment:
Q  35 cctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttc 88  Q
    ||||||||||||||| | || || || || ||||||||||||||||||||||||    
T  34123933 cctcggcagttaactaccgaggttttccttggcagttaactgcagccggatttc 34123986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 42942476 - 42942525
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgcc 111  Q
    |||||||||||| ||| || || ||||||||||||||||| |||||||||    
T  42942476 ctcggcagttaattgccgctggttttctaaaacttcggcagttaactgcc 42942525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 3892456 - 3892543
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggca 143  Q
    ||||| || |||||||||||||||||||||| ||  |||   ||||||| ||||||||||| | ||||||   ||| ||||||||||||||    
T  3892456 gaagttttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgagggacatttgagtaatttactcgtgtggca 3892543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 5197058 - 5197014
Alignment:
Q  96 tcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    |||||| ||||||||||| |  |||||||||||||||||||||||    
T  5197058 tcggcagttaactgccgaggggcatttagataaattactcgtgtg 5197014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 28388519 - 28388595
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||| | || || || ||||||||||||||||||| ||||||| ||  | ||||||  ||||||||||    
T  28388519 tcggcagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagctaactgccga 28388595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 38855708 - 38855788
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttc-taaaacttcggcatttaactgccga 113  Q
    |||| ||||||||||| | || || || |||||||||||||||| ||||| || | | ||||||||||| |||||||||||    
T  38855708 tccttggcagttaactaccgaggttttcctcggcagttaactgccgccggtttccttcaaacttcggcagttaactgccga 38855788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 38968170 - 38968118
Alignment:
Q  35 cctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt 87  Q
    |||||||||||||||   || || || ||||||||||||||||||||||||||    
T  38968170 cctcggcagttaactatcgaggttttcctcggcagttaactgcagccggattt 38968118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 40788784 - 40788828
Alignment:
Q  95 ttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    ||||||| ||||||||||| || ||||| ||||||||||||||||    
T  40788784 ttcggcagttaactgccgaggagcatttggataaattactcgtgt 40788828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 40789204 - 40789252
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccg 82  Q
    |||||||||||||||| || || | || |||||||||||||||||||||    
T  40789204 tcctcggcagttaactgctaaaattttcctcggcagttaactgcagccg 40789252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 75)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 7189948 - 7190089
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||| |  ||   |  ||| ||||    
T  7189948 tcctcggcagttaactaccgaagttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaggggcaaaaacgtaatttac 7190047  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||| | ||||||| |||||| ||||||||||||||    
T  7190048 tcgtgtggcacaaccttatgtaatgtgggaacatcaattctc 7190089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 41500198 - 41500284
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt 87  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| | || || |||||||||||||||||||||||||||||    
T  41500198 tgagagagcttatgccagatttgtagcagaagatcctcggcagttaactaccgaggtttttctcggcagttaactgcagccggattt 41500284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 3943189 - 3943330
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| | || || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||   |  | | ||||    
T  3943189 tcctcggcagttaactaccgaggtttttctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaggagcaaaaacgtcatttac 3943288  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||| ||||||||  |||||| ||||| ||||||||    
T  3943289 tcgtgtggcatagccttatctaatgtgggaacaacaattctc 3943330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 28419480 - 28419341
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcg 136  Q
    ||||||||||||| | ||||| || ||||| |||||||| | ||||| || |||||||||||||| |||||||||||||  ||||||| |||| ||||||    
T  28419480 tcggcagttaactgccgaagttttcctcggtagttaactaccgccggtttactaaaacttcggcagttaactgccgaagggcatttaggtaaaatactcg 28419381  T
Q  137 tgtggcaaagccttatgcaatgtgagaacatcaattctcc 176  Q
    ||||||| ||||||||  ||||||  |||| |||||||||    
T  28419380 tgtggcacagccttatcaaatgtgtaaacagcaattctcc 28419341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 24512276 - 24512197
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagc 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||| |||||| |||||||||||    
T  24512276 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggtttttttcggcaattaactgcagc 24512197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 30803034 - 30803129
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    ||||| || ||||||||||||||||||||| |||||||||||||||||| ||||||||||| | ||||||   ||| |||||||||||||| ||||    
T  30803034 gaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcacagcc 30803129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 17424216 - 17424126
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgga-tttctaaaacttcggcatttaactgccgaag 115  Q
    |||||||||||||||||||||||| | || || || ||||||||||||||||||||||| |||| |||| ||||||| |||||||||||||    
T  17424216 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggattttccaaaatttcggcagttaactgccgaag 17424126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 176
Target Start/End: Original strand, 23347325 - 23347467
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||||||||| || | || || || ||||| |||||||||||||||||||||||||||||||||| |||||||||||||  ||   |  | | ||||    
T  23347325 tcctcggcagttagctaccgaggttttcctcggtagttaactgcagccggatttctaaaacttcggcagttaactgccgaagggcaaaaacgtcatttac 23347424  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctcc 176  Q
    |||||||||| ||||||||  ||||||  |||| |||||||||    
T  23347425 tcgtgtggcacagccttatcaaatgtgtaaacagcaattctcc 23347467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 29093792 - 29093870
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcag 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |  | || || ||||||| ||||||||||    
T  29093792 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactgccaaggttttcctcggcaattaactgcag 29093870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 41273264 - 41273386
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttat 152  Q
    ||||| || |||||||||||||||| ||||  || |||||||||||||| |||||||||||||  |||||  ||||| ||||||||||||| |||| |||    
T  41273264 gaagttttcctcggcagttaactgccgccgatttactaaaacttcggcagttaactgccgaagggcattttcataaagtactcgtgtggcacagccatat 41273363  T
Q  153 gcaatgtgagaacatcaattctc 175  Q
    | ||||||  |||| ||||||||    
T  41273364 gtaatgtgtaaacaacaattctc 41273386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 175
Target Start/End: Original strand, 20951071 - 20951184
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtga 161  Q
    ||||||||||||||||||||||||||| ||  | |||||| |||||||||||||  ||||||| ||| ||||| |||||||| ||||||||   |||||     
T  20951071 ctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaagggcatttaggtaatttactggtgtggcacagccttatcacatgtgg 20951170  T
Q  162 gaacatcaattctc 175  Q
    ||||| ||||||||    
T  20951171 gaacagcaattctc 20951184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 23346856 - 23346775
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    |||||||||||||||| | || || || || ||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  23346856 tcctcggcagttaactaccgaggttttccttggcagttaactgcagccggatttataaaacttcggcagttaactgccgaag 23346775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2920480 - 2920528
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2920480 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 2920528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 3086083 - 3086003
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggca 143  Q
    ||||||||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||   ||| ||||||||||||||    
T  3086083 tcggcagttaactacagccgtatttctaaaacttcggcagttaactgccgaggaacatttgagtaatttactcgtgtggca 3086003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 34638246 - 34638134
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggc 100  Q
    |||||||||||||   ||||||||||||||||||||||| || |||||| | ||||| || ||||||||||||||| | ||| ||||||||  | |||||    
T  34638246 tgagagagcttct---agatttgtagcagaagatcctcgacaattaactaccgaagttttcctcggcagttaactg-aaccgaatttctaattcctcggc 34638151  T
Q  101 atttaactgccgaagaa 117  Q
    | |||||||||||||||    
T  34638150 agttaactgccgaagaa 34638134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 10425816 - 10425921
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||||||||| ||||||||||||||| || |||||| |||| || ||||| | ||||||||    
T  10425816 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactaccgaggagcatttgggtaaattac 10425915  T
Q  134 tcgtgt 139  Q
    | ||||    
T  10425916 tggtgt 10425921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 36510872 - 36510932
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||| || ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  36510872 gaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccga 36510932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 39393146 - 39393046
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggc 100  Q
    |||||||||||||  ||||||||||| |||||||||||| ||||||||| | || || ||||||| ||||||||| || ||| |||||||| || |||||    
T  39393146 tgagagagcttctatcagatttgtagtagaagatcctcgacagttaactaccgaggtttttctcgacagttaactacatccgaatttctaatacctcggc 39393047  T
Q  101 a 101  Q
    |    
T  39393046 a 39393046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 28477064 - 28477139
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    |||| ||||||||||| | || || || ||||||||||||||||||||| |||||||||||||||||| |||||||    
T  28477064 tccttggcagttaactaccgaggttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactg 28477139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 37 - 140
Target Start/End: Original strand, 29401605 - 29401708
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcg 136  Q
    ||||||||||||| | || | | ||||||| |||||||||| ||||| |||||||||||||| || ||||||||||| |  ||||||  |||||||||||    
T  29401605 tcggcagttaactgccgaggaaattctcgggagttaactgccgccggttttctaaaacttcgacagttaactgccgaggggcatttaagtaaattactcg 29401704  T
Q  137 tgtg 140  Q
    ||||    
T  29401705 tgtg 29401708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10365756 - 10365838
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    ||||||||||| |||||||||||||||| ||||||||||||| |||||| |  | || || |||||||||||||| |||||||    
T  10365756 tgagagagcttatgccagatttgtagcaaaagatcctcggcatttaactaccaaggttttcctcggcagttaactacagccgg 10365838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 10424915 - 10424801
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || ||||||||||||||| ||||| |||||||||||||||||| |||||||| || |  |||||   ||| ||||    
T  10424915 tcctcggtagtttactgccgaagttttcctcggcagttaactgtagccgtatttctaaaacttcggcagttaactgctgaggggcatttgagtaatttac 10424816  T
Q  134 tcgtgtggcaaagcc 148  Q
    |||||||||| ||||    
T  10424815 tcgtgtggcacagcc 10424801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 7185103 - 7184990
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtga 161  Q
    |||||||||| ||||  ||||| || |||||| ||||||| |||||||||||||  |||||  ||||| ||||||| ||||| ||||||||| ||||||     
T  7185103 ctcggcagtttactgtcgccggtttactaaaaattcggcagttaactgccgaagggcattttcataaagtactcgtttggcacagccttatgtaatgtgt 7185004  T
Q  162 gaacatcaattctc 175  Q
     |||| ||||||||    
T  7185003 aaacagcaattctc 7184990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 33222692 - 33222587
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| | ||||| || |||||||||||||||||||||| | | ||||| ||||| | ||||||||||| || |||||   ||| ||||    
T  33222692 tcctcggcagttaactgccgaagttttcctcggcagttaactgcagccggttctttaaaatttcggtagttaactgccgaggagcatttgagtaatttac 33222593  T
Q  134 tcgtgt 139  Q
    ||||||    
T  33222592 tcgtgt 33222587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 43976900 - 43976823
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    |||||||||||||| ||||||| ||| ||||| ||||||| ||||||||||| || ||||||| | ||||||||||||    
T  43976900 ctcggcagttaactacagccggttttttaaaatttcggcagttaactgccgaggagcatttaggttaattactcgtgt 43976823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 3937841 - 3937933
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt-ctaaaacttcggcatttaactgccgaagaa 117  Q
    ||||||| |||||||||||||||| | || || |  ||||||||||||||||||||||||||   |||| ||||||| |||||||||||||||    
T  3937841 gcagaagttcctcggcagttaacttccgaggtttacctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaagaa 3937933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 36652948 - 36652876
Alignment:
Q  68 agttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    ||||||||||| |||| |||||||||||||| || ||||||||||| | |||||||  |||||||||||||||    
T  36652948 agttaactgcatccggttttctaaaacttcgacagttaactgccgatggacatttaagtaaattactcgtgtg 36652876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 43258730 - 43258818
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacattt 122  Q
    |||||||||||||||| |  |||| ||  |||| |||||||||||||||| ||| | ||||||||||| ||||||||||||| ||||||    
T  43258730 tcctcggcagttaactaccaaagttttcttcggtagttaactgcagccggttttttcaaacttcggcagttaactgccgaaggacattt 43258818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 43870137 - 43870197
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||| || |||||||| ||||||||| ||||||||||||||||||||| |||||||||||    
T  43870137 gaagttttcctcggcagctaactgcagtcggatttctaaaacttcggcagttaactgccga 43870197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 43982283 - 43982191
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt-ctaaaacttcggcatttaactgccgaagaa 117  Q
    ||||||| |||||||||||||||| | || || || ||||||||||||||||||||||||||   |||| ||||| | |||||||||||||||    
T  43982283 gcagaagttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagaaaatttcggtagttaactgccgaagaa 43982191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 29947843 - 29947764
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||| |||||||| | ||||| || ||| || ||||||| |||||| |||||||||||||||||| |||||||||||    
T  29947843 tcctcggtagttaactgccgaagttttcctcagcggttaactccagccgtatttctaaaacttcggcagttaactgccga 29947764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40679561 - 40679608
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaac 48  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  40679561 tgagagaggttcttccagatttgtagcagaagatcctcggcagttaac 40679608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2648226 - 2648152
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaact 75  Q
    |||||||| |||||||||||||||||||||||||| |||||| |||||| | ||  | || ||||||||||||||    
T  2648226 tgagagagtttctgccagatttgtagcagaagatcatcggcaattaactaccgagattttcctcggcagttaact 2648152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 29074031 - 29074109
Alignment:
Q  65 ggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggca 143  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||| |  |||||   ||| ||||||||||||||    
T  29074031 ggcagttaactgccgctggatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggca 29074109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 29407045 - 29406967
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    ||||||||||||| | ||||| || |||||||||||| ||||||||| | | ||||| ||||||| |||||||||||||    
T  29407045 tcggcagttaactgccgaagttttcctcggcagttaattgcagccggttctttaaaatttcggcagttaactgccgaag 29406967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 43491218 - 43491136
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    |||||||||||||||||||||| || |||||||| |||||||||||||| |  | || || |||| ||||||| |||||||||    
T  43491218 tgagagagcttctgccagatttataacagaagattctcggcagttaactaccaaggttttcctcgacagttaattgcagccgg 43491136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 29397986 - 29397929
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaa 91  Q
    |||||||||||||||||| || || || |||||||||||||||||| |||||||||||    
T  29397986 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagtcggatttctaa 29397929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 2528687 - 2528607
Alignment:
Q  95 ttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    ||||||| |||||||||||||  ||||  | ||||||||| ||||| || |||||||||||||||| ||||| ||||||||    
T  2528687 ttcggcagttaactgccgaagggcattgcggtaaattactagtgtgacacagccttatgcaatgtgtgaacagcaattctc 2528607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 39489257 - 39489145
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactc 135  Q
    ||||| |||| ||| | ||||| || |||| ||||||||||||| || |||| ||||||||||||| |||||||||||||   ||||   ||| ||||||    
T  39489257 ctcggtagtttactgccgaagttttcctcgacagttaactgcagtcgtatttgtaaaacttcggcagttaactgccgaagggtatttgagtaatttactc 39489158  T
Q  136 gtgtggcaaagcc 148  Q
    |||||||| ||||    
T  39489157 gtgtggcacagcc 39489145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 20937974 - 20937859
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaa-cttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || | | | ||||| ||| | |||| ||||| || |||||| |||||||| |||||||||||||  ||||||| ||| |||    
T  20937974 tcctcggcagttaactgccgaggaaatcctcggtagtaagctgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttaggtaattta 20937875  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  20937874 ctcgtgtggcacagcc 20937859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 22003398 - 22003513
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || || || |||||||||||||||| ||||| || || |||||||||||| || ||| ||||||  |||||   ||| |||    
T  22003398 tcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaattta 22003497  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  22003498 ctcgtgtggcacagcc 22003513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 27276371 - 27276450
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||| |||||||| || || || ||||||||||||||||||||||||||| ||  | || ||| |||||||||||    
T  27276371 tcctcggcaattaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcagcagttaactgccga 27276450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 148
Target Start/End: Original strand, 43619167 - 43619254
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaa-cttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    |||||||||||||||| ||||| || |||||| |||||||| |||||||||||||  |||||   ||| |||||||||||||| ||||    
T  43619167 ctcggcagttaactgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttgattaatttactcgtgtggcacagcc 43619254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 6637582 - 6637504
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    ||||| |||||||||||||||| || |  ||||||||||| |||||| |||| | || ||||| |||||||||||||||    
T  6637582 ctcggtagttaactgcagccggtttccacaaacttcggcagttaactaccgagggacgtttaggtaaattactcgtgtg 6637504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 139
Target Start/End: Original strand, 29601193 - 29601247
Alignment:
Q  85 tttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    ||||||||||||| ||| ||||||||||||| | |||| ||||||||||||||||    
T  29601193 tttctaaaacttcagcagttaactgccgaaggatatttggataaattactcgtgt 29601247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 10825292 - 10825215
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||| | || || || |||| ||||||  ||||||||||||||||||||||||| | |||||| ||||    
T  10825292 ctcggcagttaactgccgaggttttcctcgacagttaggtgcagccggatttctaaaacttcggtagttaactaccga 10825215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 16544447 - 16544342
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||||||||| || | ||||| |  ||||  |||||| |||| |||| | | ||||| ||||||| ||||||| ||||| | |||||||||||||||    
T  16544447 tcctcggcagttagctgccgaagtttccctcgagagttaagtgcaaccggttctttaaaatttcggcaattaactgtcgaaggatatttagataaattac 16544348  T
Q  134 tcgtgt 139  Q
    ||||||    
T  16544347 tcgtgt 16544342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 39947675 - 39947594
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    ||||| |||||||||| | ||||| || |||||||||||||||| ||||| || ||||||||||| || || ||| ||||||    
T  39947675 tcctctgcagttaactaccgaagttttcctcggcagttaactgccgccggtttactaaaacttcgacagtttactaccgaag 39947594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 41004604 - 41004555
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    |||||||||||||||| | ||||| ||| |||||||||||||||||||||    
T  41004604 tcctcggcagttaactaccgaagtttttttcggcagttaactgcagccgg 41004555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 24607593 - 24607641
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgc 110  Q
    |||||||||||||||||||||| ||| |||| |||||||| ||||||||    
T  24607593 ctcggcagttaactgcagccggttttttaaatcttcggcagttaactgc 24607641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 29407884 - 29407972
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacattt 122  Q
    |||||||||||||||| | ||||| || ||||  |||||||||||||||| | | ||||| |||| || ||||||||||| | ||||||    
T  29407884 tcctcggcagttaactgccgaagttttcctcgttagttaactgcagccggttctttaaaatttcgacagttaactgccgagggacattt 29407972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 34639313 - 34639453
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga-agaacatttagataaattact 134  Q
    |||||||||||||||| || || || ||| |||||||||||||||||||||| |||    |||||| ||| |||||||  |  ||   |  |||||||||    
T  34639313 ctcggcagttaactcccgatgttttcctcagcagttaactgcagccggatttttaatttctcggcagttacctgccgagggggcaaaaaagtaaattact 34639412  T
Q  135 cgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
     |||||||| ||||||||  |||||| ||||||||||||||    
T  34639413 agtgtggcacagccttatcaaatgtgggaacatcaattctc 34639453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 43257798 - 43257738
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacattt 122  Q
    |||||||||||||||| ||||| ||| | |||||||| || ||||||||||||| ||||||    
T  43257798 ctcggcagttaactgctgccggttttttcaaacttcgacagttaactgccgaaggacattt 43257738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 3795413 - 3795334
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| |  | || || ||||||||||||||||||||||||||| ||  | ||| || |||||||||||    
T  3795413 tcctcggcagttaacttccaaggttttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccga 3795334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 3803568 - 3803619
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||||||||| ||  | |||||| |||||||||||    
T  3803568 ctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 3803619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 17420644 - 17420529
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || |  ||||||||||||||||||| ||||| || || |||||||||| |   |||||||||||  ||||| | ||  |||    
T  17420644 tcctcggcagttaactaccgaggattttctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttggtatttta 17420545  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  17420544 ctcgtgtggcacagcc 17420529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 17426362 - 17426441
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccg 112  Q
    |||||||||||||||| |||| || || ||||||| |||||||| |||||  | || |||||||||||| ||||||||||    
T  17426362 tcctcggcagttaactactgaggttttcctcggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccg 17426441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26858222 - 26858175
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaac 48  Q
    |||||||  ||||| || ||||||||||||||||||||||||||||||    
T  26858222 tgagagaatttctgtcacatttgtagcagaagatcctcggcagttaac 26858175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 38945810 - 38945759
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||||||||| ||  | |||||| |||||||||||    
T  38945810 ctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 38945759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 40156475 - 40156400
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactg 109  Q
    ||||||||||||||||   ||||| || |||| ||||||||||||||||| |||  |||| ||||||| |||||||    
T  40156475 tcctcggcagttaactgtcgaagttttcctcgtcagttaactgcagccggtttttcaaaatttcggcaattaactg 40156400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 175
Target Start/End: Original strand, 15488172 - 15488281
Alignment:
Q  63 tcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtgag 162  Q
    |||| |||||||||||||||| ||| |||   |||| || ||||||| ||| | |||||| |||||||||||  |||| || | ||||||||||||||      
T  15488172 tcggtagttaactgcagccggttttataa---ttcgacaattaactgtcgagggacatttcgataaattactaatgtgacacaaccttatgcaatgtgtc 15488268  T
Q  163 aacatcaattctc 175  Q
    |||| ||||||||    
T  15488269 aacaacaattctc 15488281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 28138656 - 28138582
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaact 108  Q
    |||||||||||||||| | ||||| || |||||||||||| |||| |||| | | ||||| ||||||| ||||||    
T  28138656 tcctcggcagttaactgccgaagttttcctcggcagttaattgcaaccggttctttaaaatttcggcagttaact 28138582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 175
Target Start/End: Original strand, 39211587 - 39211697
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtga 161  Q
    ||||| ||||||||||||||||  ||| | || |||| || |||||||| ||||  ||||| |||||||||||  |||| || |||||||||||| |||     
T  39211587 ctcggtagttaactgcagccgg--ttccataa-ttcgacagttaactgctgaagggcatttcgataaattactaatgtgacacagccttatgcaacgtgt 39211683  T
Q  162 gaacatcaattctc 175  Q
     |||||||||||||    
T  39211684 caacatcaattctc 39211697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 39793982 - 39793924
Alignment:
Q  90 aaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    |||||||||||| |||||||||||||  ||||| ||||  |||||||||||||| ||||    
T  39793982 aaaacttcggcagttaactgccgaagggcattttgatattttactcgtgtggcacagcc 39793924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 39800706 - 39800764
Alignment:
Q  90 aaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    |||||||||||| |||||||||||||  ||||| ||||  |||||||||||||| ||||    
T  39800706 aaaacttcggcagttaactgccgaagggcattttgatattttactcgtgtggcacagcc 39800764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 14002567 - 14002490
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    |||||||||||||||||||||| | | ||||| ||| ||| ||||||||||| | ||||||   ||| ||||||||||    
T  14002567 ctcggcagttaactgcagccggttctttaaaatttcagcagttaactgccgagggacatttgagtaatttactcgtgt 14002490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 25184827 - 25184876
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    |||||||||||||||| | || || || ||||||||||||||||||||||    
T  25184827 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 25184876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 33002364 - 33002409
Alignment:
Q  95 ttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    ||||||| |||||| |||||| |||||| |||||||||||||||||    
T  33002364 ttcggcagttaactaccgaaggacatttcgataaattactcgtgtg 33002409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 43870215 - 43870260
Alignment:
Q  130 ttactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||||||| | ||||||| |||||| ||||||||||||||    
T  43870215 ttactcgtgtggcacaaccttatgtaatgtgggaacatcaattctc 43870260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 213449 - 213529
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | || | ||| ||||| |||||||||| ||||| || || ||||| |||||| |||||||||||    
T  213449 tcctcggcagttaactaccgaggaattcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccga 213529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 12252507 - 12252567
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacattt 122  Q
    ||||| |||||||||||||||| | | ||||| |||| || ||||||||||||| ||||||    
T  12252507 ctcggaagttaactgcagccggttctttaaaatttcgacagttaactgccgaaggacattt 12252567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 18003269 - 18003349
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | || | ||| ||||| |||||||||| ||||| || || ||||| |||||| |||||||||||    
T  18003269 tcctcggcagttaactaccgaggaattcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccga 18003349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 28472157 - 28472105
Alignment:
Q  66 gcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaa 117  Q
    |||||||||||||||||||||| | |||| ||||||| |||||| ||||||||    
T  28472157 gcagttaactgcagccggatttttcaaaatttcggcagttaactaccgaagaa 28472105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 29093923 - 29093971
Alignment:
Q  126 taaattactcgtgtggcaaagccttatgcaatgtgagaacatcaattct 174  Q
    ||||||||||||||| || ||||||||| |||||| ||||| |||||||    
T  29093923 taaattactcgtgtgccacagccttatgtaatgtgggaacaacaattct 29093971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 39489963 - 39490074
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || |||||||||||||||||||||| ||  |||   ||| ||| ||||||||||| | ||||||  |||| ||||    
T  39489963 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggtttcataa---ttcagcagttaactgccgagggacatttgaataatttac 39490059  T
Q  134 tcgtgtggcaaagcc 148  Q
     ||||||||| ||||    
T  39490060 ccgtgtggcatagcc 39490074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 156
Target Start/End: Original strand, 29097828 - 29097948
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga-agaacatttagataaattactc 135  Q
    ||||||||||||| | ||||| |||||| |||||||||||||||||||||||||||| |||| || |||| |||||| ||||||  ||  | ||||||||    
T  29097828 tcggcagttaactaccgaagtttttctcagcagttaactgcagccggatttctaaaatttcgacagttaattgccgagagaacaaatacgtcaattactc 29097927  T
Q  136 gtgtggcaaagccttatgcaa 156  Q
    ||||| |||| ||||||||||    
T  29097928 gtgtgccaaatccttatgcaa 29097948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 12783921 - 12784003
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccgg 83  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||| |||| || || |||| ||| |||||||||||||    
T  12783921 tgagagagctttttccagatttgtagcagaagatcctcggcagttaactactgaggttttcctcgacagctaactgcagccgg 12784003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 14012372 - 14012513
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||||||| | || || || ||||||||||||||| |||||||||||||||||||||||| |||||||| ||||  ||   |  | | ||||    
T  14012372 tcctcggtagttaactgccgatgttttcctcggcagttaactgaagccggatttctaaaacttcggcagttaactgctgaagggcaaaaacgtcatttac 14012471  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||| ||||||||  |||||| ||||| ||||||||    
T  14012472 tcgtgtggcacagccttattaaatgtgggaacaacaattctc 14012513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 29076320 - 29076401
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    |||||||||||||||| | || || || ||| ||||||||||||||||||||||||||||||||| || |||||||||||||    
T  29076320 tcctcggcagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccgaag 29076401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 29109853 - 29109934
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    |||||||||||||||| | || || || ||| ||||||||||||||||||||||||||||||||| || |||||||||||||    
T  29109853 tcctcggcagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccgaag 29109934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 29111293 - 29111374
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    |||||||||||||||| | || || || ||| ||||||||||||||||||||||||||||||||| || |||||||||||||    
T  29111293 tcctcggcagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccgaag 29111374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 6204911 - 6204819
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt-ctaaaacttcggcatttaactgccgaagaa 117  Q
    |||||||||||||||||||||||| | || || || ||||||||||||||||||||||||||   |||| ||||||| |||||||||||||||    
T  6204911 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaagaa 6204819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 22305192 - 22305100
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaa 117  Q
    |||| ||||||||||||||||||| | || || || |||||||||||||||||||||||||| | |||| ||||||| |||||||||||||||    
T  22305192 gcaggagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaagaa 22305100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 158
Target Start/End: Original strand, 26351093 - 26351217
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||||| || || || |||||||||||||||| ||||| || ||||||||||| || ||||||| ||||  ||||||   |||| |||    
T  26351093 tcctcggcagttaactcccgaggttttcctcggcagttaactgccgccggtttactaaaacttcgacagttaactgtcgaatgacattttcgtaaagtac 26351192  T
Q  134 tcgtgtggcaaagccttatgcaatg 158  Q
    |||||||||| || |||||| ||||    
T  26351193 tcgtgtggcacagtcttatgtaatg 26351217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 11840247 - 11840389
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga-agaacatttagataaatta 132  Q
    |||||||||||||||| | || || || |||| |||||||||||||||| |||||||||||||||||| |||||| || |  |  ||   | || |||||    
T  11840247 tcctcggcagttaactaccgaggttttcctcgacagttaactgcagccgaatttctaaaacttcggcagttaactaccaagggggcaaaaacatcaatta 11840346  T
Q  133 ctcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||| || |||||||||||||||| ||||| ||||||||    
T  11840347 ctcgtgtgtcacagccttatgcaatgtgggaacaacaattctc 11840389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 8983493 - 8983562
Alignment:
Q  260 ggagagaaaaacctaatttcaactaacatgcaagagttcaaaacaatataatttatcatgattaaattgt 329  Q
    |||||||||||| |||| |||| |||||||||||| |||||||| |||||| ||||||||||||||||||    
T  8983493 ggagagaaaaacttaatctcaagtaacatgcaagaattcaaaacgatataacttatcatgattaaattgt 8983562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 9048151 - 9048070
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    |||||||||||||||| | ||||| || ||||| |||||||||||||||| ||| | ||||||||||| |||||||||||||    
T  9048151 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggttttttcaaacttcggcagttaactgccgaag 9048070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 2109574 - 2109514
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||| || ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  2109574 gaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccga 2109514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 11691878 - 11691786
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggattt-ctaaaacttcggcatttaactgccgaagaa 117  Q
    |||||||||||||||||||||||| | || || || ||||||||||||||||||||||||||    ||| ||||||| |||||||||||||||    
T  11691878 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagcaaatttcggcagttaactgccgaagaa 11691786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 15888799 - 15888878
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    ||||||||| |||| | | ||| || |||||||||||||||||||||| ||||||||||||||| | |||||||||||||    
T  15888799 ctcggcagtaaactaccgcagttttcctcggcagttaactgcagccggttttctaaaacttcggtagttaactgccgaag 15888878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 26350050 - 26349928
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || |||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |||||   |||| |||    
T  26350050 tcctcggtagtttactgcagaagttttcctcggcagttaactgccgccggtttactaaa-cttcggcagttaactgccgaagagcattttcgtaaaatac 26349952  T
Q  134 tcgtgtggcaaagccttatgcaat 157  Q
    ||||||| || | |||||||||||    
T  26349951 tcgtgtgacacaaccttatgcaat 26349928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 3501199 - 3501085
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttatgcaatgtga 161  Q
    ||||| |||||||||| || || || ||||||||||| || |||||||||||||  ||||||  |||| ||||||||||||| ||||||||  ||||||     
T  3501199 ctcggtagttaactgccgctggtttactaaaacttcgacagttaactgccgaagggcatttacgtaaaatactcgtgtggcagagccttatcaaatgtgt 3501100  T
Q  162 gaacatcaattctcc 176  Q
     |||| |||||||||    
T  3501099 aaacagcaattctcc 3501085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 9049076 - 9049162
Alignment:
Q  29 gaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    |||| |||||||||||||||| | ||||| || ||||| |||||||||||||||| ||| | ||||||||||| ||||||| |||||    
T  9049076 gaagttcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggttttttcaaacttcggcagttaactgtcgaag 9049162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 178
Target Start/End: Original strand, 6760869 - 6761013
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||| ||| | ||||| || ||||||| ||||||||||||| |||||||||||||||||| |||||| || | |  |||||   ||| ||||    
T  6760869 tcctcggtagtttactgccgaagttttcctcggcaattaactgcagccgtatttctaaaacttcggcagttaactaccaaggggcatttgagtaatttac 6760968  T
Q  134 tcgtgtggcaaagccttatgcaatgtgagaacatcaattctcccc 178  Q
    |||||||||| ||||  |   |||||| ||||| |||||||||||    
T  6760969 tcgtgtggcacagccaaaccaaatgtgggaacagcaattctcccc 6761013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 141
Target Start/End: Original strand, 17597521 - 17597629
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||||| ||||| || |||||||||||||||| ||||| || || ||||||||| ||   |||| |||||||||||||   ||| |||    
T  17597521 tcctcggcagttaactcccgaagttttcctcggcagttaactgccgccggtttcctaaaaacttcgacagcaaactaccgaagaacatttgagtaattta 17597620  T
Q  133 ctcgtgtgg 141  Q
    |||||||||    
T  17597621 ctcgtgtgg 17597629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 25554750 - 25554702
Alignment:
Q  65 ggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||    
T  25554750 ggcagttaactgcagccgtatttctaaaacttcggcagttaactgccga 25554702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29061379 - 29061331
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  29061379 tgagagagcttctaccagatttgtagcagaagatcctcggaagttaact 29061331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 28249961 - 28249846
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaa-cttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || || || |||||||||||||||| ||||| |  |||||| |||||||||||||||| ||| || |||||   ||| |||    
T  28249961 tcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggttccctaaaaacttcggcatttaactgtcgaggagcatttgagtaattta 28249862  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  28249861 ctcgtgtggcacagcc 28249846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29065837 - 29065791
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaa 47  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||    
T  29065837 tgagagagcttccgccagatttgtagcagaagatcctcgacagttaa 29065791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29074850 - 29074804
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaa 47  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||    
T  29074850 tgagagagcttccgccagatttgtagcagaagatcctcgacagttaa 29074804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29079614 - 29079568
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaa 47  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||    
T  29079614 tgagagagcttccgccagatttgtagcagaagatcctcgacagttaa 29079568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29107423 - 29107377
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaa 47  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||    
T  29107423 tgagagagcttccgccagatttgtagcagaagatcctcgacagttaa 29107377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 32034358 - 32034404
Alignment:
Q  3 agagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  32034358 agagatcttctgccagatttgtagcagaagatcatcggcagttaact 32034404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 32223510 - 32223615
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    |||||||||||||||| | ||||| || |||||  ||||||||||||||  ||| | ||||||||||| ||||||||||||  ||||||  ||||| |||    
T  32223510 tcctcggcagttaactaccgaagttttcctcggtggttaactgcagccgattttttcaaacttcggcagttaactgccgaatgacattttcataaagtac 32223609  T
Q  134 tcgtgt 139  Q
    | ||||    
T  32223610 tagtgt 32223615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13401595 - 13401547
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||    
T  13401595 tgagagagcttctgtcatatttgtagcagaagatcctcggtagttaact 13401547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 13382705 - 13382590
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || || || |||||||||||||||| ||||| || || ||||||||| || || ||| |||||| ||||||   ||| |||    
T  13382705 tcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttcctaaaaacttcgtcagtttactaccgaaggacatttgagtaattta 13382606  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  13382605 ctcgtgtggcacagcc 13382590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 24719981 - 24719911
Alignment:
Q  70 ttaactgcagccggatttcta-aaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    ||||||||||||| ||||| | ||||||||||| ||||||||||||| |||||||| ||||||| |||||||    
T  24719981 ttaactgcagccg-atttccacaaacttcggcagttaactgccgaaggacatttaggtaaattagtcgtgtg 24719911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 31768829 - 31768750
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | || || || ||||||| |||||||||||||||||| |||  | |||||| |||||||||||    
T  31768829 tcctcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagttaactgccga 31768750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 148
Target Start/End: Original strand, 18351643 - 18351755
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaa-cttcggcatttaactgccgaagaacatttagataaattactc 135  Q
    ||||||||||||| | || || || ||||||||||||||||  |||| || |||||| |||||| |   |||||||||||||||||| | ||  ||||||    
T  18351643 tcggcagttaactaccgaggttttcctcggcagttaactgccaccggtttcctaaaatcttcggtagcaaactgccgaagaacattttggtattttactc 18351742  T
Q  136 gtgtggcaaagcc 148  Q
    |||||||| ||||    
T  18351743 gtgtggcacagcc 18351755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 31146449 - 31146373
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgc 110  Q
    |||||||||||||||| | || || || |||| |||||||||||||||||||||| ||  | |||||| ||||||||    
T  31146449 tcctcggcagttaactaccgatgttttcctcgacagttaactgcagccggatttcaaattcctcggcagttaactgc 31146373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 31151066 - 31151114
Alignment:
Q  65 ggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||||||||||| |||| |||| || |||||||||||    
T  31151066 ggcagttaactgcagccggatttcaaaaatttcgacagttaactgccga 31151114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 26856004 - 26855929
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactg 76  Q
    ||||||||||||||||||||||||||||| |   | |||||||||||||   |||| | | |||||||||||||||    
T  26856004 tgagagagcttctgccagatttgtagcaggatcgcatcggcagttaacttgcgaagaaatcctcggcagttaactg 26855929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 29061344 - 29061229
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaa-catttagataaattactcgtgtggcaaagccttatgcaatgtg 160  Q
    ||||| ||||||||||||||| ||||||||  | |||||| ||||||||||| |   ||   |  ||||||||||||||| || ||||||||| ||||||    
T  29061344 ctcggaagttaactgcagccgaatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatgtaatgtg 29061245  T
Q  161 agaacatcaattctcc 176  Q
     ||||| |||||||||    
T  29061244 ggaacaccaattctcc 29061229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 19757345 - 19757271
Alignment:
Q  37 tcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgcc 111  Q
    |||| |||||||| | ||||| |||||||  ||||||||||||  ||||||||||||||||| || |||| ||||    
T  19757345 tcggtagttaactaccgaagtttttctcgatagttaactgcagttggatttctaaaacttcgacagttaattgcc 19757271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 7361174 - 7361125
Alignment:
Q  126 taaattactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    ||||||||||||||| || ||||||||||||||||  |||| ||||||||    
T  7361174 taaattactcgtgtgccacagccttatgcaatgtgtcaacagcaattctc 7361125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 11687986 - 11688031
Alignment:
Q  130 ttactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    |||||||||||||| ||||||||| |||||| ||||| ||||||||    
T  11687986 ttactcgtgtggcacagccttatgtaatgtgggaacagcaattctc 11688031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 29065782 - 29065737
Alignment:
Q  68 agttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||||||  | |||||| |||||||||||    
T  29065782 agttaactgcagccggatttctaattcctcggcagttaactgccga 29065737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 29074795 - 29074750
Alignment:
Q  68 agttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||||||  | |||||| |||||||||||    
T  29074795 agttaactgcagccggatttctaattcctcggcagttaactgccga 29074750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 29079559 - 29079514
Alignment:
Q  68 agttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||||||  | |||||| |||||||||||    
T  29079559 agttaactgcagccggatttctaattcctcggcagttaactgccga 29079514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 29107368 - 29107323
Alignment:
Q  68 agttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||||||||||||||  | |||||| |||||||||||    
T  29107368 agttaactgcagccggatttctaattcctcggcagttaactgccga 29107323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 91
Target Start/End: Original strand, 31771766 - 31771795
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaa 91  Q
    ||||||||||||||||||||||||||||||    
T  31771766 ctcggcagttaactgcagccggatttctaa 31771795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 8193206 - 8193254
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccg 82  Q
    ||||||||||||||||   ||||| || |||||||||||||||||||||    
T  8193206 tcctcggcagttaactgtcgaagttttcctcggcagttaactgcagccg 8193254  T

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Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 11157786 - 11157738
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccg 82  Q
    |||||| ||||||||| ||||||| || ||| |||||||||||||||||    
T  11157786 tcctcgacagttaactactgaagttttcctcagcagttaactgcagccg 11157738  T

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Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 149
Target Start/End: Complemental strand, 26712124 - 26712008
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || || || |||||||||||||||| ||||  || || |||||||||||| || ||| ||||||  |||||   ||| |||    
T  26712124 tcctcggcagttaactaccgaggttttcctcggcagttaactgccgccgatttcctaaaaacttcggcagtttactaccgaagggcatttccgtaactta 26712025  T
Q  133 ctcgtgtggcaaagcct 149  Q
    ||||| ||||| |||||    
T  26712024 ctcgtttggcacagcct 26712008  T

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Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 28362756 - 28362804
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgc 110  Q
    ||||||||||||||||||||||||||| ||  | |||||| ||||||||    
T  28362756 ctcggcagttaactgcagccggatttcaaattcctcggcagttaactgc 28362804  T

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Target: scaffold0101 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 36523 - 36615
Alignment:
Q  26 gcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttct-aaaacttcggcatttaactgccgaagaa 117  Q
    |||| ||||||||||||||||||| | || || || |||||||||||| ||||||||||||| | |||| ||||||| |||||||||||||||    
T  36523 gcaggagatcctcggcagttaactaccgaggttttcctcggcagttaattgcagccggatttttcaaaatttcggcagttaactgccgaagaa 36615  T

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Target: scaffold0101; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 41019 - 41078
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaa 93  Q
    |||||||||||||||||| || || || |||||||||||||||| ||||| || ||||||    
T  41019 tcctcggcagttaactcccgaggttttcctcggcagttaactgccgccggtttcctaaaa 41078  T

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Target: scaffold0180 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 143
Target Start/End: Original strand, 15621 - 15728
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactc 135  Q
    |||||||||||||| |  | || || |||||||||||||||| ||||| || ||||||||||| || ||||||||||||| ||||||   |||| |||||    
T  15621 ctcggcagttaactaccaaggttttcctcggcagttaactgccgccggtttactaaaacttcgacagttaactgccgaaggacattttcgtaaagtactc 15720  T
Q  136 gtgtggca 143  Q
    ||||||||    
T  15721 gtgtggca 15728  T

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Target: scaffold0283 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 1634 - 1715
Alignment:
Q  58 atttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgt 139  Q
    ||||||||||||||||||||| |||  |||||||||||||  || ||||||||||||  | ||||| |||||||||||||||    
T  1634 atttctcggcagttaactgcaaccgattttctaaaacttcaacagttaactgccgaaagatatttaaataaattactcgtgt 1715  T

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Target: scaffold0192 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18863 - 18940
Alignment:
Q  1 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcctgaagtatttctcggcagttaactgca 78  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||| | || | |   |||||||||||||||||    
T  18863 tgagaaagcttctgccagatttgtagcagaagatcctcgacagttaactaccgaggaaagcctcggcagttaactgca 18940  T

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Target: scaffold0038 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 50123 - 50008
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaa-cttcggcatttaactgccgaagaacatttagataaatta 132  Q
    |||||||||||||||| | || || || |||||||||||||||| ||||| |  |||||| |||||||||||||||| ||| || |||||   ||| |||    
T  50123 tcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggttccctaaaaacttcggcatttaactgtcgaggagcatttgagtaattta 50024  T
Q  133 ctcgtgtggcaaagcc 148  Q
    ||||||||||| ||||    
T  50023 ctcgtgtggcacagcc 50008  T

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Target: scaffold0176 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 903 - 857
Alignment:
Q  3 agagagcttctgccagatttgtagcagaagatcctcggcagttaact 49  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||    
T  903 agagagcttctgccagatttgtagaggaagatcctcggcagttaact 857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 870 - 817
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    ||||||||||||||||||||||||||||||  |||||||| |||| | ||||||    
T  870 ctcggcagttaactgcagccggatttctaattcttcggcagttaattaccgaag 817  T

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Target: scaffold0504 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 143
Target Start/End: Complemental strand, 12458 - 12349
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattac 133  Q
    ||||||| |||||||||| || || || |||||||||||| ||| ||||| || |||||| |||| || |||||||||||||  |||||   |||| |||    
T  12458 tcctcgggagttaactcccgaggttttcctcggcagttaattgccgccggtttactaaaatttcgacagttaactgccgaagggcatttttgtaaagtac 12359  T
Q  134 tcgtgtggca 143  Q
    ||||||||||    
T  12358 tcgtgtggca 12349  T

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Target: scaffold1379 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 431 - 510
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||| |||||||||| || || || |||| ||||||||||||||||||||  |||  |||||||| |||||||||||    
T  431 tcctcggtagttaactcccgaggttttcctcgacagttaactgcagccggattattaattcttcggcagttaactgccga 510  T

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Target: scaffold0341 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 17348 - 17427
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | || |  || ||||||||||||||||||||||||||| ||  | |||||| |||||||||||    
T  17348 tcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 17427  T

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Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 18292 - 18371
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    |||||||||||||| | || || ||  ||| |||| |||||||| ||||||||||||||||||||| ||||| |||||||    
T  18292 ctcggcagttaactaccgaggttttcttcgacagtaaactgcagtcggatttctaaaacttcggcagttaaccgccgaag 18371  T

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Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 54552 - 54473
Alignment:
Q  36 ctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaag 115  Q
    |||||||||||||| | || || ||  ||| |||| |||||||| ||||||||||||||||||||| ||||| |||||||    
T  54552 ctcggcagttaactaccgaggttttcttcgacagtaaactgcagtcggatttctaaaacttcggcagttaaccgccgaag 54473  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 69218 - 69297
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||| |||| ||| | ||||| ||  ||| |||||||||||| ||| |||||||||||||||||| |||||||||||    
T  69218 tcctcggtagtttactgccgaagttttcttcgacagttaactgcatccgtatttctaaaacttcggcagttaactgccga 69297  T

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Target: scaffold0494 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 11507 - 11565
Alignment:
Q  90 aaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagcc 148  Q
    |||||||||||| |||||||||||||  ||||||| ||| |||||||||||||| ||||    
T  11507 aaaacttcggcagttaactgccgaagggcatttaggtaatttactcgtgtggcacagcc 11565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 5407 - 5327
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttc-taaaacttcggcatttaactgccga 113  Q
    |||||||||||||||| | || || || |||||||||||||||| ||||| || | | ||||||||||| |||||||||||    
T  5407 tcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttccttcaaacttcggcagttaactgccga 5327  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 236285 - 236375
Alignment:
Q  62 ctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtggcaaagccttat 152  Q
    |||||||||| ||||| ||| | || |||||||||||||| ||||| |||||||  |||||   |||| ||||||||||||| ||||||||    
T  236285 ctcggcagtttactgccgccagtttactaaaacttcggcagttaaccgccgaagggcattttcgtaaagtactcgtgtggcacagccttat 236375  T

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Target: scaffold0268 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 15441 - 15489
Alignment:
Q  65 ggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||||||||| ||||||||||||| ||||| ||| |||||||||||    
T  15441 ggcagttaactgccgccggatttctaatacttcagcagttaactgccga 15489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 65394 - 65314
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaa 114  Q
    |||||||||||||||| | ||||| || |||| ||||||||||||||||  | | | ||| ||||||| ||||||||||||    
T  65394 tcctcggcagttaactgccgaagttttcctcgacagttaactgcagccgattcttttaaatttcggcagttaactgccgaa 65314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 15952 - 16031
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccga 113  Q
    ||||||| |||||||| | || || || ||||||||||||||||||| ||||||| ||  | |||||| |||||||||||    
T  15952 tcctcggaagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagttaactgccga 16031  T

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Target: scaffold0219 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 20203 - 20252
Alignment:
Q  126 taaattactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    ||||||||||||||| |  ||||||||||||||||  |||||||||||||    
T  20203 taaattactcgtgtgtctcagccttatgcaatgtgtaaacatcaattctc 20252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 1735 - 1784
Alignment:
Q  126 taaattactcgtgtggcaaagccttatgcaatgtgagaacatcaattctc 175  Q
    ||||||||||||||| |  ||||||||||||||||  |||||||||||||    
T  1735 taaattactcgtgtgcctcagccttatgcaatgtgtcaacatcaattctc 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 13906 - 13954
Alignment:
Q  34 tcctcggcagttaactcctgaagtatttctcggcagttaactgcagccg 82  Q
    ||||||| |||||||| | || || ||||||||||||||||||||||||    
T  13906 tcctcggtagttaactgccgatgtttttctcggcagttaactgcagccg 13954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 134330 - 134414
Alignment:
Q  53 gaagtatttctcggcagttaactgcagccggatttctaaaacttcggcatttaactgccgaagaacatttagataaattactcgtgtg 140  Q
    ||||| || ||||| ||||||||||||||||  ||||| || ||||||| ||||||||||| || ||||| | ||||||||| |||||    
T  134330 gaagttttcctcggtagttaactgcagccgg--ttctataa-ttcggcagttaactgccgaggagcatttcggtaaattactagtgtg 134414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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