View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17239_high_26 (Length: 291)
Name: NF17239_high_26
Description: NF17239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17239_high_26 |
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Alignment Details
Target: chr3 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 3 - 272
Target Start/End: Original strand, 45395034 - 45395303
Alignment:
| Q |
3 |
taactctattggtattggattaggaccaccaatccaccatcactcacatatatagatagatgtgatgcagctaattctattatcatcatcctggaaatca |
102 |
Q |
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| T |
45395034 |
taactctattggtattggattaggaccaccaatccaccatcactcacgtatatagatagatgtgatgcagctaattctattatcatcatcctggaaatca |
45395133 |
T |
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| Q |
103 |
cattacgtggacgtggcatattataagaggcacgtgcttccaacacatgattagtgctctaaaggttacgttatcatactaatactatctatctattcat |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45395134 |
cattacgtggacgtggcatattataagaggcacgtgcttccaacacatgattagtgctctaaaggttacgttatcatactaatactatctatctattcat |
45395233 |
T |
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| Q |
203 |
tgaattggatccatatactatgtagattcaaccccnnnnnnnatatatattgaggtaaaaaagaaatgtc |
272 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
45395234 |
tgaattggatccatatactatgtagattcaacccctttttttatatatattgaggtaaaaaagaaatgtc |
45395303 |
T |
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