View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17239_low_31 (Length: 267)

Name: NF17239_low_31
Description: NF17239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17239_low_31
NF17239_low_31
[»] chr7 (60 HSPs)
chr7 (17-256)||(772359-772596)
chr7 (157-252)||(43483654-43483749)
chr7 (157-252)||(9933901-9933996)
chr7 (157-252)||(40775321-40775416)
chr7 (157-247)||(13008643-13008733)
chr7 (149-252)||(47749779-47749883)
chr7 (157-252)||(33530433-33530528)
chr7 (151-232)||(41748484-41748565)
chr7 (149-252)||(135110-135214)
chr7 (149-252)||(25855185-25855289)
chr7 (157-247)||(10250453-10250541)
chr7 (157-240)||(23732370-23732453)
chr7 (157-232)||(39090170-39090245)
chr7 (166-252)||(14734014-14734100)
chr7 (157-229)||(49166981-49167052)
chr7 (169-252)||(5025021-5025104)
chr7 (157-232)||(21552440-21552515)
chr7 (157-252)||(26017623-26017718)
chr7 (157-252)||(28015411-28015506)
chr7 (157-252)||(30992788-30992883)
chr7 (157-228)||(35141740-35141811)
chr7 (169-232)||(36350262-36350325)
chr7 (192-242)||(1749242-1749292)
chr7 (157-247)||(8319369-8319459)
chr7 (157-247)||(32312621-32312711)
chr7 (192-242)||(35132893-35132943)
chr7 (166-235)||(43098642-43098709)
chr7 (149-235)||(46918446-46918532)
chr7 (151-252)||(38649322-38649423)
chr7 (157-229)||(8611611-8611682)
chr7 (156-252)||(34594487-34594583)
chr7 (157-229)||(35661578-35661650)
chr7 (149-232)||(37399671-37399755)
chr7 (146-220)||(15123977-15124052)
chr7 (152-245)||(18919383-18919477)
chr7 (157-247)||(44681515-44681604)
chr7 (157-235)||(45949659-45949737)
chr7 (157-229)||(1685008-1685079)
chr7 (157-217)||(19895651-19895711)
chr7 (198-242)||(28476179-28476223)
chr7 (149-247)||(7985937-7986036)
chr7 (173-224)||(28314599-28314650)
chr7 (166-252)||(29804640-29804727)
chr7 (151-229)||(47156442-47156518)
chr7 (149-247)||(23177553-23177650)
chr7 (193-235)||(33614851-33614893)
chr7 (166-235)||(2528345-2528414)
chr7 (166-235)||(21329278-21329347)
chr7 (193-242)||(22742891-22742940)
chr7 (193-242)||(33507695-33507744)
chr7 (202-242)||(24350932-24350972)
chr7 (157-229)||(24475397-24475468)
chr7 (165-244)||(15335865-15335944)
chr7 (182-229)||(35363054-35363101)
chr7 (157-247)||(14707637-14707727)
chr7 (151-217)||(40476757-40476822)
chr7 (157-242)||(16263442-16263526)
chr7 (157-225)||(15869413-15869481)
chr7 (157-229)||(24470449-24470520)
chr7 (198-230)||(48930725-48930757)
[»] chr2 (52 HSPs)
chr2 (149-247)||(25623015-25623114)
chr2 (151-252)||(7443531-7443632)
chr2 (161-252)||(25237291-25237382)
chr2 (157-253)||(37883707-37883803)
chr2 (157-252)||(3390486-3390581)
chr2 (157-252)||(19580967-19581062)
chr2 (149-235)||(19953615-19953702)
chr2 (157-252)||(25771499-25771594)
chr2 (157-235)||(26491357-26491434)
chr2 (161-252)||(13268631-13268721)
chr2 (157-252)||(27024104-27024199)
chr2 (157-247)||(29812585-29812675)
chr2 (157-252)||(35353697-35353792)
chr2 (166-252)||(5930486-5930572)
chr2 (157-235)||(10589093-10589171)
chr2 (157-235)||(29734244-29734322)
chr2 (157-235)||(42105734-42105812)
chr2 (151-235)||(9715526-9715610)
chr2 (157-252)||(7640321-7640416)
chr2 (151-252)||(3603033-3603134)
chr2 (149-247)||(41841995-41842092)
chr2 (157-252)||(16879930-16880025)
chr2 (157-252)||(16992063-16992158)
chr2 (151-232)||(3465007-3465086)
chr2 (192-242)||(10237312-10237362)
chr2 (157-235)||(40125443-40125521)
chr2 (167-236)||(3397960-3398029)
chr2 (151-219)||(12183326-12183394)
chr2 (157-229)||(43566929-43567000)
chr2 (166-252)||(4878701-4878787)
chr2 (183-253)||(31269059-31269129)
chr2 (151-229)||(36507979-36508056)
chr2 (157-229)||(25516548-25516619)
chr2 (157-229)||(27191324-27191395)
chr2 (157-229)||(27841138-27841209)
chr2 (157-252)||(5071335-5071430)
chr2 (166-252)||(2251310-2251396)
chr2 (205-247)||(17074882-17074924)
chr2 (175-229)||(44167698-44167752)
chr2 (157-229)||(6089947-6090017)
chr2 (166-235)||(22269427-22269496)
chr2 (161-229)||(38822133-38822199)
chr2 (157-242)||(43929331-43929416)
chr2 (198-230)||(3308905-3308937)
chr2 (171-247)||(15071519-15071595)
chr2 (157-225)||(15673953-15674021)
chr2 (183-235)||(31262936-31262988)
chr2 (205-256)||(8064748-8064799)
chr2 (168-234)||(14825629-14825695)
chr2 (205-247)||(17068885-17068927)
chr2 (207-252)||(10589199-10589244)
chr2 (190-242)||(36943210-36943262)
[»] chr8 (55 HSPs)
chr8 (157-235)||(10042826-10042904)
chr8 (171-252)||(5917707-5917788)
chr8 (161-240)||(12244193-12244272)
chr8 (149-247)||(16938241-16938340)
chr8 (157-252)||(32256686-32256781)
chr8 (157-252)||(44295370-44295465)
chr8 (149-252)||(9270066-9270170)
chr8 (157-240)||(2628967-2629049)
chr8 (157-235)||(13864413-13864491)
chr8 (157-235)||(37719906-37719983)
chr8 (167-247)||(13977466-13977546)
chr8 (149-252)||(36545746-36545850)
chr8 (157-252)||(31874138-31874233)
chr8 (157-235)||(15665593-15665671)
chr8 (161-235)||(15827068-15827142)
chr8 (157-247)||(37659020-37659110)
chr8 (157-229)||(31147789-31147861)
chr8 (157-253)||(32412844-32412940)
chr8 (149-247)||(5989675-5989774)
chr8 (160-247)||(7281097-7281184)
chr8 (157-252)||(41996599-41996694)
chr8 (157-235)||(1215321-1215399)
chr8 (166-252)||(16937304-16937390)
chr8 (151-229)||(16996876-16996953)
chr8 (166-235)||(7269446-7269515)
chr8 (182-247)||(17019197-17019262)
chr8 (182-247)||(17549634-17549699)
chr8 (151-252)||(8054772-8054875)
chr8 (157-252)||(14327533-14327628)
chr8 (166-252)||(31713041-31713127)
chr8 (157-252)||(32920706-32920801)
chr8 (149-247)||(9992710-9992811)
chr8 (157-235)||(11655892-11655970)
chr8 (154-252)||(32061845-32061943)
chr8 (157-235)||(32104820-32104898)
chr8 (198-242)||(18890792-18890836)
chr8 (198-242)||(39657406-39657450)
chr8 (157-252)||(23766794-23766888)
chr8 (202-252)||(12248679-12248729)
chr8 (146-235)||(18190826-18190916)
chr8 (175-225)||(26538901-26538951)
chr8 (157-229)||(37129662-37129731)
chr8 (166-229)||(6833543-6833606)
chr8 (173-244)||(12547741-12547812)
chr8 (199-242)||(24099344-24099387)
chr8 (166-252)||(3925655-3925740)
chr8 (169-207)||(29013817-29013855)
chr8 (166-228)||(31013681-31013742)
chr8 (166-235)||(5328030-5328099)
chr8 (192-245)||(14919365-14919418)
chr8 (190-242)||(5457158-5457210)
chr8 (171-235)||(12356887-12356951)
chr8 (198-242)||(14585658-14585702)
chr8 (157-241)||(26937579-26937663)
chr8 (166-242)||(37971210-37971286)
[»] chr1 (47 HSPs)
chr1 (157-235)||(35077872-35077950)
chr1 (157-240)||(52839584-52839667)
chr1 (149-252)||(40488362-40488466)
chr1 (149-235)||(10877391-10877478)
chr1 (157-252)||(22344877-22344972)
chr1 (157-252)||(27469673-27469768)
chr1 (157-247)||(12148018-12148108)
chr1 (149-253)||(15276414-15276519)
chr1 (157-252)||(33703475-33703569)
chr1 (157-235)||(33177579-33177657)
chr1 (149-247)||(8893338-8893437)
chr1 (157-252)||(32539155-32539250)
chr1 (149-229)||(15698245-15698326)
chr1 (157-252)||(630749-630845)
chr1 (157-252)||(5832287-5832383)
chr1 (157-232)||(14717227-14717303)
chr1 (157-229)||(45659096-45659168)
chr1 (185-240)||(23039727-23039782)
chr1 (157-252)||(23257142-23257237)
chr1 (149-247)||(29067095-29067193)
chr1 (157-252)||(38646638-38646733)
chr1 (157-235)||(2350676-2350754)
chr1 (157-222)||(900176-900241)
chr1 (149-229)||(1768011-1768092)
chr1 (157-234)||(27356744-27356821)
chr1 (157-229)||(4564572-4564643)
chr1 (149-232)||(34659614-34659698)
chr1 (157-232)||(6212871-6212946)
chr1 (157-252)||(23320494-23320589)
chr1 (157-252)||(34566742-34566837)
chr1 (157-252)||(44562714-44562809)
chr1 (157-247)||(13969613-13969703)
chr1 (166-232)||(40992399-40992465)
chr1 (157-235)||(44513971-44514049)
chr1 (198-242)||(16161791-16161835)
chr1 (157-232)||(46589228-46589304)
chr1 (192-242)||(48750132-48750182)
chr1 (166-235)||(13691740-13691809)
chr1 (157-235)||(22415374-22415454)
chr1 (157-252)||(21326527-21326622)
chr1 (151-242)||(22032066-22032156)
chr1 (190-240)||(11121063-11121113)
chr1 (189-242)||(7836884-7836937)
chr1 (151-188)||(26199640-26199677)
chr1 (203-252)||(26199680-26199729)
chr1 (166-235)||(37662273-37662342)
chr1 (198-242)||(34413185-34413229)
[»] scaffold0157 (1 HSPs)
scaffold0157 (149-252)||(1106-1210)
[»] chr4 (60 HSPs)
chr4 (149-252)||(12519701-12519805)
chr4 (157-252)||(40859700-40859795)
chr4 (157-253)||(51646147-51646244)
chr4 (157-252)||(9661907-9662002)
chr4 (157-252)||(14542477-14542572)
chr4 (157-252)||(15729946-15730041)
chr4 (157-252)||(30416586-30416681)
chr4 (157-247)||(38434652-38434743)
chr4 (157-252)||(4634337-4634432)
chr4 (157-252)||(9474504-9474599)
chr4 (149-242)||(9526314-9526408)
chr4 (157-243)||(28588616-28588702)
chr4 (157-247)||(46728890-46728980)
chr4 (157-242)||(1124996-1125080)
chr4 (166-235)||(23926104-23926173)
chr4 (157-241)||(43156830-43156914)
chr4 (169-240)||(1657543-1657614)
chr4 (149-235)||(2945182-2945269)
chr4 (157-252)||(23067813-23067908)
chr4 (166-252)||(4959538-4959623)
chr4 (157-252)||(32189037-32189129)
chr4 (151-252)||(46716859-46716960)
chr4 (149-245)||(46775828-46775925)
chr4 (151-232)||(54420698-54420778)
chr4 (157-252)||(31601323-31601419)
chr4 (157-235)||(28990352-28990430)
chr4 (157-235)||(29257280-29257357)
chr4 (157-235)||(36804539-36804617)
chr4 (151-235)||(38170141-38170226)
chr4 (166-234)||(5388578-5388646)
chr4 (157-252)||(16991926-16992021)
chr4 (157-235)||(29589343-29589422)
chr4 (166-228)||(9781795-9781857)
chr4 (192-242)||(27651908-27651958)
chr4 (192-242)||(36194673-36194723)
chr4 (173-235)||(50003158-50003220)
chr4 (191-252)||(6408531-6408592)
chr4 (151-236)||(9549515-9549600)
chr4 (166-235)||(11817135-11817204)
chr4 (157-242)||(42972092-42972177)
chr4 (161-242)||(44375239-44375320)
chr4 (198-242)||(31891382-31891426)
chr4 (166-242)||(44021546-44021622)
chr4 (157-252)||(7242734-7242829)
chr4 (157-232)||(53903664-53903738)
chr4 (192-242)||(1621596-1621646)
chr4 (169-247)||(26625202-26625279)
chr4 (146-235)||(37869399-37869489)
chr4 (157-229)||(20961505-20961575)
chr4 (207-252)||(30416558-30416603)
chr4 (146-235)||(26576484-26576575)
chr4 (166-232)||(1008248-1008312)
chr4 (166-227)||(4622699-4622761)
chr4 (174-232)||(23963780-23963838)
chr4 (149-229)||(34115639-34115721)
chr4 (196-253)||(38546022-38546079)
chr4 (157-222)||(52555716-52555781)
chr4 (188-233)||(54481713-54481758)
chr4 (198-242)||(22300823-22300867)
chr4 (191-235)||(29577104-29577148)
[»] chr6 (28 HSPs)
chr6 (157-232)||(31804302-31804377)
chr6 (157-252)||(13234073-13234168)
chr6 (160-229)||(16913385-16913454)
chr6 (151-231)||(12652186-12652266)
chr6 (149-252)||(20845053-20845157)
chr6 (149-235)||(22530325-22530412)
chr6 (157-252)||(23843389-23843484)
chr6 (157-252)||(32457700-32457795)
chr6 (149-230)||(8644290-8644372)
chr6 (157-240)||(4663797-4663880)
chr6 (157-252)||(10744634-10744732)
chr6 (149-247)||(15128123-15128218)
chr6 (157-235)||(32804349-32804427)
chr6 (156-242)||(33194658-33194744)
chr6 (198-242)||(1523359-1523403)
chr6 (151-229)||(8633179-8633255)
chr6 (166-253)||(33541493-33541580)
chr6 (198-240)||(30776623-30776665)
chr6 (149-229)||(7049291-7049371)
chr6 (198-242)||(14801778-14801822)
chr6 (149-247)||(1944141-1944240)
chr6 (157-252)||(19759842-19759937)
chr6 (202-247)||(5417168-5417213)
chr6 (168-209)||(8406124-8406165)
chr6 (198-242)||(545981-546025)
chr6 (198-230)||(8102677-8102709)
chr6 (151-229)||(12576468-12576545)
chr6 (202-242)||(31852276-31852316)
[»] chr5 (46 HSPs)
chr5 (157-252)||(6887143-6887238)
chr5 (155-252)||(22397513-22397610)
chr5 (157-252)||(37425050-37425145)
chr5 (157-247)||(8812121-8812211)
chr5 (157-247)||(34866481-34866571)
chr5 (153-247)||(40774808-40774904)
chr5 (149-232)||(15710587-15710671)
chr5 (151-247)||(41358087-41358183)
chr5 (157-252)||(31645883-31645978)
chr5 (157-252)||(33486534-33486629)
chr5 (173-252)||(13007762-13007841)
chr5 (173-252)||(13079215-13079294)
chr5 (166-252)||(10924098-10924184)
chr5 (173-247)||(13080223-13080297)
chr5 (149-232)||(28500762-28500846)
chr5 (157-229)||(32390635-32390707)
chr5 (157-232)||(35906351-35906426)
chr5 (157-231)||(34843970-34844044)
chr5 (157-242)||(41554541-41554626)
chr5 (157-229)||(28618658-28618729)
chr5 (157-252)||(29310319-29310409)
chr5 (184-226)||(6647904-6647946)
chr5 (202-252)||(20270813-20270863)
chr5 (157-235)||(41063378-41063456)
chr5 (198-242)||(2979401-2979445)
chr5 (192-236)||(15710292-15710336)
chr5 (195-235)||(20146198-20146238)
chr5 (157-233)||(34873915-34873991)
chr5 (157-252)||(6074701-6074796)
chr5 (157-235)||(35455146-35455225)
chr5 (192-242)||(14211170-14211220)
chr5 (166-252)||(40565120-40565206)
chr5 (157-218)||(8957265-8957326)
chr5 (151-232)||(18472710-18472790)
chr5 (198-235)||(19103569-19103606)
chr5 (159-232)||(34893901-34893974)
chr5 (166-234)||(17326160-17326228)
chr5 (198-242)||(28541001-28541045)
chr5 (157-217)||(39591103-39591163)
chr5 (157-252)||(2415454-2415549)
chr5 (157-252)||(4726893-4726988)
chr5 (149-223)||(19646035-19646110)
chr5 (157-229)||(4070608-4070678)
chr5 (147-215)||(28423805-28423874)
chr5 (198-235)||(39567251-39567288)
chr5 (202-235)||(41988251-41988284)
[»] chr3 (55 HSPs)
chr3 (157-252)||(43029737-43029832)
chr3 (157-247)||(1165366-1165456)
chr3 (157-234)||(36540656-36540732)
chr3 (157-252)||(22844106-22844201)
chr3 (157-247)||(32089900-32089990)
chr3 (149-252)||(29182573-29182677)
chr3 (157-233)||(42106166-42106242)
chr3 (160-228)||(53426855-53426923)
chr3 (161-252)||(913281-913372)
chr3 (151-242)||(21585947-21586038)
chr3 (157-235)||(25939461-25939539)
chr3 (157-247)||(39340253-39340343)
chr3 (149-242)||(43839493-43839587)
chr3 (167-253)||(54240150-54240236)
chr3 (149-229)||(14741313-14741394)
chr3 (157-229)||(47914581-47914653)
chr3 (157-252)||(21803584-21803679)
chr3 (151-229)||(3088651-3088728)
chr3 (149-247)||(32237966-32238064)
chr3 (157-235)||(50460246-50460323)
chr3 (166-251)||(30292867-30292952)
chr3 (167-232)||(37051688-37051753)
chr3 (171-236)||(51741883-51741948)
chr3 (160-247)||(4019652-4019739)
chr3 (151-229)||(41882397-41882475)
chr3 (157-235)||(20201040-20201118)
chr3 (157-235)||(20203222-20203300)
chr3 (166-247)||(1806430-1806511)
chr3 (151-232)||(33076360-33076441)
chr3 (198-242)||(7546563-7546607)
chr3 (162-230)||(14617764-14617832)
chr3 (151-235)||(25374052-25374136)
chr3 (167-235)||(40365290-40365358)
chr3 (192-240)||(51923670-51923718)
chr3 (166-240)||(22893692-22893767)
chr3 (192-235)||(51303745-51303788)
chr3 (151-229)||(22286738-22286815)
chr3 (149-247)||(29776660-29776757)
chr3 (187-240)||(23673060-23673113)
chr3 (187-240)||(24045336-24045389)
chr3 (157-229)||(28995296-28995366)
chr3 (166-235)||(31628931-31629000)
chr3 (167-228)||(45664285-45664346)
chr3 (198-242)||(8914661-8914705)
chr3 (198-242)||(27706321-27706365)
chr3 (149-247)||(40461965-40462064)
chr3 (169-247)||(21085912-21085989)
chr3 (184-234)||(48282752-48282802)
chr3 (202-247)||(1220217-1220262)
chr3 (198-235)||(16235375-16235412)
chr3 (157-229)||(33977912-33977982)
chr3 (202-230)||(21289921-21289949)
chr3 (159-235)||(27831168-27831244)
chr3 (184-220)||(35670495-35670531)
chr3 (198-242)||(51487059-51487103)
[»] scaffold0316 (1 HSPs)
scaffold0316 (149-252)||(12168-12272)
[»] scaffold0024 (1 HSPs)
scaffold0024 (157-252)||(36583-36678)
[»] scaffold0018 (1 HSPs)
scaffold0018 (157-252)||(137023-137118)
[»] scaffold0340 (1 HSPs)
scaffold0340 (157-234)||(11761-11837)
[»] scaffold0722 (1 HSPs)
scaffold0722 (157-252)||(5491-5586)
[»] scaffold0012 (1 HSPs)
scaffold0012 (157-252)||(244690-244785)
[»] scaffold0009 (2 HSPs)
scaffold0009 (166-252)||(105115-105201)
scaffold0009 (198-246)||(58163-58211)
[»] scaffold0150 (1 HSPs)
scaffold0150 (174-247)||(10281-10354)
[»] scaffold0888 (1 HSPs)
scaffold0888 (192-242)||(1773-1823)
[»] scaffold1294 (1 HSPs)
scaffold1294 (149-212)||(825-889)
[»] scaffold0112 (1 HSPs)
scaffold0112 (187-235)||(25498-25546)


Alignment Details
Target: chr7 (Bit Score: 178; Significance: 4e-96; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 772359 - 772596
Alignment:
Q  17 ataaatattacacaaaccggtttagcaattatgacccacaccagtttataaatagcacaaaagnnnnnnnnnngtgatatataagcacaaaatcagttag 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |           ||||||||||||||||||||||||||    
T  772359 ataaatattacacaaaccggtttagcaattatgacccacaccagtttataaatagcacaaaggaaaaaaaaa--tgatatataagcacaaaatcagttag 772456  T
Q  117 aaatcaaacaaaatttagcacaaaatcaattatctttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtct 216  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  772457 aaatcaaacaaaagttagcacaaaatcaattatctttccctttattgatataagtgattttcgcttctatttagttttttctttcgtgatttcgtcgtct 772556  T
Q  217 tagtgcgacgttgttttgtccgtcgtttttgcgcgatatt 256  Q
    |||||||||||||||||||| ||||| |||| ||||||||    
T  772557 tagtgcgacgttgttttgtctgtcgtctttgtgcgatatt 772596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 43483654 - 43483749
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||| ||||||||| |||||||||||||||||||||||| |||||| |||| ||||    
T  43483654 tttattgaaataagtgattttcacatctatttcgtttttgcttttgtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgcga 43483749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 9933901 - 9933996
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||| | |||||||||||| || ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| |||||| |||| ||||    
T  9933901 tttattaaaataagtgatttttacatctatttcgttttttcttttgtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgcga 9933996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 40775321 - 40775416
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  40775321 tttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 40775416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 13008733 - 13008643
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| ||||    
T  13008733 tttattgaaataagtgattttcacatctattttgttttttattttgtgattttgtcgtcttagtgcgacgttggtttgttcgtcgtctttg 13008643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 47749779 - 47749883
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||| ||||| ||||||||||| ||||| |||||| ||||    
T  47749779 tctttcccttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgttgtcttcgtgcgacgttggtttgttcgtcgtctttg 47749878  T
Q  248 cgcga 252  Q
     ||||    
T  47749879 tgcga 47749883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 33530528 - 33530433
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| |||||||||||| || ||||||| ||||| ||||||||||||| ||||||||||| ||||||||| |||| |||||| |||| ||||    
T  33530528 tttattgaaataagtgatttttacatctatttcgttttctctttcgtgattttgtcgtcttagtacgacgttgtgttgttcgtcgtctttgtgcga 33530433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 41748565 - 41748484
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    ||||| |||||| | ||| ||||||||||| ||||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  41748565 tttccttttattaaaataggtgattttcacatctatttcgtttttgctttcgtgatttcgccgtcttagtgcgacgttgttt 41748484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 135214 - 135110
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| ||| ||||||||||| |||||||  |||| | ||| |||||||||||||||| ||||||||||| ||||| |||||||||||    
T  135214 tctttcccttttattgaaataggtgattttcacatctatttcattttgtattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtttttg 135115  T
Q  248 cgcga 252  Q
     ||||    
T  135114 tgcga 135110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 25855289 - 25855185
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| ||||||||||||||  ||||||| ||||||| ||| ||||||| |||||||| ||||||||||| ||||| |||||| ||||    
T  25855289 tctttcccttttattgaaataagtgattttcatatctatttcgttttttattttgtgattttgtcgtcttcgtgcgacgttggtttgttcgtcgtctttg 25855190  T
Q  248 cgcga 252  Q
     ||||    
T  25855189 tgcga 25855185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 10250541 - 10250453
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||| ||||   ||| ||||||||||||| |||||| ||||    
T  10250541 tttattgaaataagtgattttcacatctatttcgttttttctttcgtgatttcgccgtc--ggtgtgacgttgttttgttcgtcgtctttg 10250453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 23732453 - 23732370
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtc 240  Q
    |||||||| ||| ||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||| ||||    
T  23732453 tttattgaaatatgtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtc 23732370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 39090170 - 39090245
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    |||||||| ||||||||||||||| |||||||  |||||||||| ||||||||||| |||| ||||||||||||||    
T  39090170 tttattgaaataagtgattttcacatctatttcattttttcttttgtgatttcgtcatctttgtgcgacgttgttt 39090245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 14734100 - 14734014
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    ||||||||||||||| || | |||| |||| |||| ||||||||||||||||||||||||||||||||||  ||||| |||| ||||    
T  14734100 ataagtgattttcacgtcgaattaggttttccttttgtgatttcgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcga 14734014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 49166981 - 49167052
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||| ||| ||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  49166981 tttattgaaataagtgattt-cacatctatttcgttttttatttcgtgatttcgtcgtcttcgtgcgacgttg 49167052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 5025104 - 5025021
Alignment:
Q  169 agtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||| ||||||| |||| || ||| |||||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  5025104 agtgatttacacgtctatttcgtttctttttttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcga 5025021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 21552515 - 21552440
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    |||||| | |||| |||||||||| ||   |||| |||||||||||||||||||||||||||||||||||||||||    
T  21552515 tttatttaaataaatgattttcacatcggattaggtttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 21552440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 26017718 - 26017623
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||| ||  ||||||| ||| |||||||||||||||| |||||| |||| ||||| |||||| |||| ||||    
T  26017718 tttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcgtctttgtgcga 26017623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 28015411 - 28015506
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||| ||| ||||||| |||  || ||| ||||||||||||||||| |||||| ||||||||| |||||| |||| ||||    
T  28015411 tttattgaaataagtgatttacacatctatttcgttcctttttttgtgatttcgtcgtcttaatgcgaccttgttttgttcgtcgtctttgtgcga 28015506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 30992883 - 30992788
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||| ||  ||||||| ||| ||||||| |||||||| ||||||||||| ||||| |||||| |||| ||||    
T  30992883 tttattgaaataagtgattttcacatctgttacgttttttattttgtgattttgtcgtcttcgtgcgacgttgatttgttcgtcgtctttgtgcga 30992788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 35141811 - 35141740
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgtt 228  Q
    |||||||| ||||||||||||||| |||||||  |||||| ||| |||||| ||||||||||||||||||||    
T  35141811 tttattgaaataagtgattttcacatctatttcattttttattttgtgattccgtcgtcttagtgcgacgtt 35141740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 36350262 - 36350325
Alignment:
Q  169 agtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    |||||||||||| | ||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  36350262 agtgattttcacatttatttcgtttttcctttcgtgatttcgtcgtcttagtgtgacgttgttt 36350325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 1749292 - 1749242
Alignment:
Q  192 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  1749292 tttttctttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgt 1749242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 8319369 - 8319459
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||| | ||||||||||||||| | ||||||||||||| ||| ||||||| |||||||| || |||||||| ||||| |||||| ||||    
T  8319369 tttattaaaataagtgattttcacatatatttagttttttattttgtgattttgtcgtcttcgtacgacgttggtttgttcgtcgtctttg 8319459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 32312621 - 32312711
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||| | |||||||||||| |  | ||||||| ||||||||| |||||||| |||||||||||| |||||||||||| |||||| ||||    
T  32312621 tttatttaaataagtgatttttaaatatatttaggtttttcttttgtgatttcttcgtcttagtgcaacgttgttttgttcgtcgtctttg 32312711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 35132893 - 35132943
Alignment:
Q  192 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  35132893 tttttctttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgt 35132943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 43098642 - 43098709
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| |||||| |||||||||| ||||  ||||||||||||||||||||||||| |||||||||||    
T  43098642 ataagtgaatttcacatctatttagtatttt--ttcgtgatttcgtcgtcttagtgcggcgttgttttgt 43098709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 46918446 - 46918532
Alignment:
Q  149 tctttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||||||||||| |||| |||||||||| ||||||| ||||||| ||| ||||||||||| |||| |||| || ||| |||||    
T  46918446 tctttccctttattgaaataaatgattttcacatctattttgttttttattttgtgatttcgtcatctttgtgcaacattggtttgt 46918532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 252
Target Start/End: Complemental strand, 38649423 - 38649322
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgc 250  Q
    ||||| |||||||| ||||||||||| ||| ||||||| |||| || ||| ||||| |||||||||||||| ||| |||||||||  ||||| |||| ||    
T  38649423 tttccttttattgaaataagtgatttacacatctatttcgtttctttttttgtgatctcgtcgtcttagtgagaccttgttttgtttgtcgtctttgtgc 38649324  T
Q  251 ga 252  Q
    ||    
T  38649323 ga 38649322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 8611682 - 8611611
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||| ||| ||||||| ||||||| ||| |||||||||||||||| |||||||||||    
T  8611682 tttattgaaataagtgattt-cacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 8611611  T

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Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 252
Target Start/End: Complemental strand, 34594583 - 34594487
Alignment:
Q  156 ctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    ||||||| | |||||||||||| || || | || | |||||||||||||| |||||||||||||||||| ||||||||||  ||||| |||| ||||    
T  34594583 ctttatttaaataagtgattttaacatcgaattgggtttttctttcgtgacttcgtcgtcttagtgcgaagttgttttgtttgtcgtctttgtgcga 34594487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 35661578 - 35661650
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||| ||||| |||||||  |||||| ||| |||||||||||||||| |||||||||||    
T  35661578 tttattgaaataagtgatcttcacatctattttattttttattttgtgatttcgtcgtcttcgtgcgacgttg 35661650  T

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Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 232
Target Start/End: Original strand, 37399671 - 37399755
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    ||||||||||| ||||| |||| |||||||||| |||||||  |||||| ||| | |||||||||||||| ||||||||||||||    
T  37399671 tctttcccttttattgaaataaatgattttcacatctattttattttttattttgagatttcgtcgtctttgtgcgacgttgttt 37399755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 15124052 - 15123977
Alignment:
Q  146 ttatctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagt 220  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||| ||||||| ||| |||||||| ||||| ||||    
T  15124052 ttatctttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcatcgtcatagt 15123977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 18919383 - 18919477
Alignment:
Q  152 ttccctttattgatataagtgattttcacttctatttagtttttt-ctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttt 245  Q
    |||| |||||| | ||||||||||||||||| ||||||||||||| |||| |||||||   ||||||||| |||| ||| ||||| |||||||||    
T  18919383 ttccttttatttaaataagtgattttcacttatatttagttttttccttttgtgatttttccgtcttagtacgactttggtttgttcgtcgtttt 18919477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 44681515 - 44681604
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||| ||||||||||||||| ||||||| | ||||  ||| ||| ||||||||||| |||| ||||||| ||||| |||||||||||    
T  44681515 tttattgaaataagtgattttcacatctatttcg-ttttgattttgtggtttcgtcgtctcagtgtgacgttggtttgttcgtcgtttttg 44681604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 45949737 - 45949659
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||| | ||| ||||||||||| || | |||| |||||||| |||||||||||||| |||||||||| |||||||||    
T  45949737 tttatttaaatatgtgattttcacatcgaattaggtttttcttccgtgatttcgtcgtgttagtgcgacattgttttgt 45949659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 1685008 - 1685079
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||| | ||||||||||||| | ||||||||||||||| ||| ||| ||||||| ||||||||||||||||    
T  1685008 tttatttaaataagtgattttc-cgtctatttagttttttattttgtgctttcgtcatcttagtgcgacgttg 1685079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 19895711 - 19895651
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtctt 217  Q
    |||||||| ||||||||||||| | ||||||| ||||||| ||| ||||||||||||||||    
T  19895711 tttattgaaataagtgattttcgcatctattttgttttttattttgtgatttcgtcgtctt 19895651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 28476179 - 28476223
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||    
T  28476179 tttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgt 28476223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 7985937 - 7986036
Alignment:
Q  149 tctttccctt-tattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||||| |||||| |||| |||||||||| |||||||  |||| | ||| ||||||||||| |||| ||| ||||||| ||||| |||||| ||||    
T  7985937 tctttcccttctattgaaataaatgattttcacatctatttcattttgtattttgtgatttcgtcatcttcgtgtgacgttggtttgttcgtcgtctttg 7986036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 28314650 - 28314599
Alignment:
Q  173 attttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcga 224  Q
    |||||||| |||||||||||||||||| |||||||| |||||| ||||||||    
T  28314650 attttcacatctatttagttttttcttacgtgattttgtcgtcgtagtgcga 28314599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 29804727 - 29804640
Alignment:
Q  166 ataagtgattttcacttctatttagttttttc-tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    ||||||||||||||| || | |||| |||||| ||| |||||||||||||| |||||||||| ||||||||  ||||| |||| ||||    
T  29804727 ataagtgattttcacatcgaattaggtttttccttttgtgatttcgtcgtcatagtgcgacgctgttttgtttgtcgtctttgtgcga 29804640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 47156442 - 47156518
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    ||||| |||||||| ||||||||||||||| ||||||| |  |||| ||| |||||||||||||||| ||| |||||||    
T  47156442 tttccttttattgaaataagtgattttcacatctatttcg--ttttattttgtgatttcgtcgtcttcgtgtgacgttg 47156518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 23177650 - 23177553
Alignment:
Q  149 tctttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||| |||||||||| ||||||||||||||| ||||||| | ||||  ||| ||||||||  |||||||||||||| ||| ||| | |||||| ||||    
T  23177650 tcttttcctttattgaaataagtgattttcacatctatttcg-ttttcattttgtgatttctccgtcttagtgcgaccttggttttttcgtcgtctttg 23177553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 33614851 - 33614893
Alignment:
Q  193 ttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  33614851 ttttctttcgtgatttcatcgtcttagtgcgacattgttttgt 33614893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 2528345 - 2528414
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||| ||||| |  | |||| ||||||||||||||||||||||||||| ||| || |||||||||    
T  2528345 ataagtgatgttcacattgaattaggtttttctttcgtgatttcgtcgtcttactgctacattgttttgt 2528414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 21329347 - 21329278
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||||||||| || | |||| ||||||||| ||||||||||| |||||||| |||  ||||||||    
T  21329347 ataagtgattttcacatcgaattaggtttttcttttgtgatttcgtcttcttagtgtgaccctgttttgt 21329278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 22742891 - 22742940
Alignment:
Q  193 ttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||| ||||||||||||||||||||||| ||||||||| |||| ||||||    
T  22742891 ttttttttcgtgatttcgtcgtcttagttcgacgttgtgttgttcgtcgt 22742940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 33507695 - 33507744
Alignment:
Q  193 ttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||||| |||| |||||||||| |||||||||| |||||    
T  33507695 ttttctttcgtgatttcatcgttttagtgcgacattgttttgtctgtcgt 33507744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 24350972 - 24350932
Alignment:
Q  202 gtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  24350972 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgt 24350932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 24475397 - 24475468
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||| ||| ||||||| ||||||| ||| ||||||||||||||   |||||||||||    
T  24475397 tttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcgtcgtccacgtgcgacgttg 24475468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 15335865 - 15335944
Alignment:
Q  165 tataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgttt 244  Q
    ||||||||||||||||  ||| ||| ||| ||||||| ||||||| |||| | ||||| |||||||||||| ||| ||||    
T  15335865 tataagtgattttcacaactaattactttattctttcatgatttcatcgtttcagtgccacgttgttttgttcgttgttt 15335944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 35363101 - 35363054
Alignment:
Q  182 tctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||  ||||||||||| |||||||||||||||| ||||||||||    
T  35363101 tctatttcattttttctttcatgatttcgtcgtcttattgcgacgttg 35363054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 14707637 - 14707727
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||| |||| ||| ||| || |||||||  |||||| ||| ||||||||||| |||||||| | ||||| |||||  ||||||||||    
T  14707637 tttattgaaataattgaatttaacatctatttcattttttattttgtgatttcgtcatcttagtgtggcgttggtttgttagtcgtttttg 14707727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 40476757 - 40476822
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtctt 217  Q
    ||||| |||||||| |||||| |||| ||| ||||||| ||||||| ||| ||||||||||||||||    
T  40476757 tttccttttattgaaataagttattt-cacatctatttcgttttttattttgtgatttcgtcgtctt 40476822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 16263442 - 16263526
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||||||| ||||||| ||| ||| | ||||| |||| || | | ||||||||||||| |||||||||| ||||||||| ||||||    
T  16263442 tttattgaaataagtgttttacacat-tatttcgtttcttttgttgtgatttcgtcgtgttagtgcgaccttgttttgttcgtcgt 16263526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 15869413 - 15869481
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgac 225  Q
    |||||| | ||||||||||||||  | ||||||  |||| |||| |||||||| |||||||||||||||    
T  15869413 tttatttaaataagtgattttcagatatatttaacttttccttttgtgatttcatcgtcttagtgcgac 15869481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 24470449 - 24470520
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||| ||| ||||||| ||||||| ||| |||||||| |||||   |||||||||||    
T  24470449 tttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcatcgtcaacgtgcgacgttg 24470520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 48930725 - 48930757
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgt 230  Q
    |||| ||||||||||||||||||||||||||||    
T  48930725 tttcatgatttcgtcgtcttagtgcgacgttgt 48930757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 25623114 - 25623015
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  25623114 tctttcccttttattgaaataagtgattttcacatctattttgttttttctttcgtgatttcgtcgtcttagtgcgacattgttttgttcgtcgtctttg 25623015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 151 - 252
Target Start/End: Complemental strand, 7443632 - 7443531
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgc 250  Q
    ||||| |||||||| |||||| |||||||| ||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||| |||| ||    
T  7443632 tttccttttattgaaataagtaattttcacatctatttcgtttttgctttcgtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgc 7443533  T
Q  251 ga 252  Q
    ||    
T  7443532 ga 7443531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 161 - 252
Target Start/End: Complemental strand, 25237382 - 25237291
Alignment:
Q  161 ttgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||| |||||| |||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  25237382 ttgaaataagttattttcacatctatttcgttttttctttcatgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcga 25237291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 37883707 - 37883803
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcgat 253  Q
    |||||| | |||||||||||| || ||||||| ||||||||||||||| |||||| ||||||||||||||||||||||| |||||| |||| |||||    
T  37883707 tttattaaaataagtgattttaacatctatttcgttttttctttcgtggtttcgttgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgat 37883803  T

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Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 3390486 - 3390581
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  3390486 tttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 3390581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 19581062 - 19580967
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||  |||||||  |||||||||||||||||| |||||||||||||||| ||||||||| |||||| |||| ||||    
T  19581062 tttattgaaataagtgattttcatatctatttcattttttctttcgtgattttgtcgtcttagtgcgacattgttttgttcgtcgtctttgtgcga 19580967  T

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Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 19953615 - 19953702
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| |||||||||||||| |||||||||||||||| ||||||||| ||||    
T  19953615 tctttcccttttattgaaataagtgattttcacatctatttcgttttttctttcgtaatttcgtcgtcttagtacgacgttgtgttgt 19953702  T

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Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 25771499 - 25771594
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  25771499 tttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 25771594  T

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Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 26491357 - 26491434
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| ||||||||||| ||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  26491357 tttattgaaataagtgattt-cacatctatttcattttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 26491434  T

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Target: chr2; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 252
Target Start/End: Original strand, 13268631 - 13268721
Alignment:
Q  161 ttgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||| ||||||||||||||| ||||||| ||||| ||||||||| ||| |||||||||||||||||||||||||| |||||| |||| ||||    
T  13268631 ttgaaataagtgattttcacatctatttcgtttt-tctttcgtggttttgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcga 13268721  T

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Target: chr2; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 27024199 - 27024104
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||| ||| ||||| |||||| |||| ||||    
T  27024199 tttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacattggtttgttcgtcgtctttgtgcga 27024104  T

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Target: chr2; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 29812675 - 29812585
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagtttttt-ctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||| ||||||||||| ||| ||||||| ||||||| |||||||||||||||||||||||||||||| |||||||| |||||| ||||    
T  29812675 tttattgaaataagtgatttccacatctatttcgtttttttctttcgtgatttcgtcgtcttagtgcgacg-tgttttgttcgtcgtctttg 29812585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 35353697 - 35353792
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||| | |||||||||||| || || | |||| ||||||||||||||||||||||||||||||||||||||||||||  ||||| |||| ||||    
T  35353697 tttatttaaataagtgatttttacatcgaattaggtttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcga 35353792  T

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Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 252
Target Start/End: Original strand, 5930486 - 5930572
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| |||||| |||| ||||| ||||||||||| ||||    
T  5930486 ataagtgattttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcgtttttgtgcga 5930572  T

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Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 10589093 - 10589171
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||||||||||  |||||||||| |||||||||||||    
T  10589093 tttattgaaataagtgattttcacatctatttcgtttttgctttcgtgatttctccgtcttagtgtgacgttgttttgt 10589171  T

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Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 29734244 - 29734322
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| |||||||||||||||  |||||| | ||||||||||||||||| |||||||||||| |||||||||||||    
T  29734244 tttattgaaataagtgattttcacacctatttcgctttttctttcgtgattttgtcgtcttagtgtgacgttgttttgt 29734322  T

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Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 42105812 - 42105734
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| |||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||| | ||||||||||||    
T  42105812 tttattgaaataagtgactttcacatctattttgttttttcttttgtgatttcgtcgtcttagtacaacgttgttttgt 42105734  T

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Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 9715610 - 9715526
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||| |||||||| ||||||||||||||| ||||||| ||||||| ||| ||||||||||||||||||| | |||||| |||||    
T  9715610 tttccttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgtcgtcttagtacaacgttgatttgt 9715526  T

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Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 7640416 - 7640321
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||| ||  ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  7640416 tttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 7640321  T

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Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 252
Target Start/End: Original strand, 3603033 - 3603134
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgc 250  Q
    ||||| ||| |||| ||||||||||||||  ||||||| ||||||| ||| |||||||| ||||||| ||||||||||| ||||| |||||| |||| ||    
T  3603033 tttccttttcttgaaataagtgattttcatatctatttcgttttttattttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgc 3603132  T
Q  251 ga 252  Q
    ||    
T  3603133 ga 3603134  T

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Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 41841995 - 41842092
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| ||||| ||||||||| ||||||| |||| || ||  |||||||||||||||||||||||||||| ||||| |||||| ||||    
T  41841995 tctttcccttttattgaaataagcgattttcacatctatttcgtttcttttt--gtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtctttg 41842092  T

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Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 16880025 - 16879930
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| | ||||| ||||||| | | |||||||| ||||||| ||||||||||| ||||| |||||| |||| ||||    
T  16880025 tttattgaaataagtgattttcacatttattttgttttttatcttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 16879930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 16992158 - 16992063
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| | ||||| ||||||| | | |||||||| ||||||| ||||||||||| ||||| |||||| |||| ||||    
T  16992158 tttattgaaataagtgattttcacatttattttgttttttatcttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 16992063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 3465007 - 3465086
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    ||||| |||||||| ||||||||||  ||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||||||    
T  3465007 tttccttttattgaaataagtgatt--cacatctatttcgttttttattttgtgatttcgtcgtctttgtgcgacgttgttt 3465086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 10237362 - 10237312
Alignment:
Q  192 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  10237362 tttttctttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgt 10237312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 40125443 - 40125521
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| ||| ||||||||||| ||||||| ||||||| ||| ||||||| ||| ||||||||| ||||||||||||    
T  40125443 tttattgaaatacgtgattttcacatctattttgttttttattttgtgattttgtcatcttagtgcaacgttgttttgt 40125521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 3398029 - 3397960
Alignment:
Q  167 taagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtc 236  Q
    |||||||| ||||| || | |||| |||||||||||||||||||||||||| ||||||| ||||||||||    
T  3398029 taagtgatcttcacatcaaattagatttttctttcgtgatttcgtcgtctttgtgcgacattgttttgtc 3397960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 12183394 - 12183326
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttag 219  Q
    ||||| |||||| | ||||||||||||||| ||||| ||||||||||||| ||||||||||| ||||||    
T  12183394 tttccttttatttaaataagtgattttcacatctatatagttttttctttagtgatttcgtcatcttag 12183326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 43566929 - 43567000
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||| ||| ||||||| ||||||| ||| |||||||||||||||| |||||||||||    
T  43566929 tttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 43567000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 4878787 - 4878701
Alignment:
Q  166 ataagtgatttt-cacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||||||| ||| |||||||  |||||||||||||||||| |||||||| |||||| |||||||||| |||||| |||| ||||    
T  4878787 ataagtgatttttcacatctattttattttttctttcgtgattt-gtcgtctttgtgcgatgttgttttgttcgtcgtctttgtgcga 4878701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 31269129 - 31269059
Alignment:
Q  183 ctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcgat 253  Q
    |||||| ||||| | |||||||||||||||||||||||||||| ||||||||| |||| | |||| |||||    
T  31269129 ctattttgttttctttttcgtgatttcgtcgtcttagtgcgacattgttttgttcgtcttctttgtgcgat 31269059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 36507979 - 36508056
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    ||||| |||||||| |||||| |||| ||| ||||||| ||||||| ||| |||||||||||||||| |||||||||||    
T  36507979 tttccttttattgaaataagtaattt-cacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 36508056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 25516548 - 25516619
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||| ||| ||||||| ||||||| ||| |||||||| ||||||| |||||||||||    
T  25516548 tttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcttcgtcttcgtgcgacgttg 25516619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 27191395 - 27191324
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||| ||| ||||||| ||||||| ||| |||||||||||||||| || ||||||||    
T  27191395 tttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcgtcgtcttcgtacgacgttg 27191324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 27841209 - 27841138
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||| ||| ||||||| ||||||| ||| |||||||||||||||| || ||||||||    
T  27841209 tttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcgtcgtcttcgtacgacgttg 27841138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 5071430 - 5071335
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||| | ||||||||||||||| |  | |||| |||| |||| ||||||||||| ||||||||| ||||||||||||  ||||| |||| ||||    
T  5071430 tttatttaaataagtgattttcacattaaattaggttttccttttgtgatttcgtcatcttagtgcaacgttgttttgtttgtcgtctttgtgcga 5071335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 2251396 - 2251310
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    ||||||||||||||| || | |||| |  | |||| ||||||||||||||||||||||||| ||||||||  ||||| |||| ||||    
T  2251396 ataagtgattttcacatcgaattaggtcatccttttgtgatttcgtcgtcttagtgcgacgctgttttgtttgtcgtctttgtgcga 2251310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 247
Target Start/End: Complemental strand, 17074924 - 17074882
Alignment:
Q  205 atttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||| ||||||||||||||||||||||||||||||||| ||||    
T  17074924 attttgtcgtcttagtgcgacgttgttttgtccgtcgtctttg 17074882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 44167752 - 44167698
Alignment:
Q  175 tttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||| ||||||| ||||||| ||| |||||||||||||||| |||||||||||    
T  44167752 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 44167698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 6089947 - 6090017
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||||||| ||||||| |  |||| ||| |||||||||||||||| |||||| ||||    
T  6089947 tttattgaaataagtgattttcacatctatttcg--ttttattttgtgatttcgtcgtcttcgtgcgatgttg 6090017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 22269496 - 22269427
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||| |||| ||||| | |||||||||||| ||||| |||||| ||||||||||||||| ||| ||||||    
T  22269496 ataaatgatattcacatatatttagtttttcctttcttgattttgtcgtcttagtgcgaggttattttgt 22269427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 38822133 - 38822199
Alignment:
Q  161 ttgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||| ||||||||||||||| ||||||| ||||| | ||  |||||||||||||||| |||||||||||    
T  38822133 ttgaaataagtgattttcacatctatttcgttttatttt--gtgatttcgtcgtcttcgtgcgacgttg 38822199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 43929416 - 43929331
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||||||| |||||| |||||||| | | ||  ||||||| ||| |||||||||||||||| ||||||| ||| ||||| ||||||    
T  43929416 tttattgaaataagtcattttcacatatgttacgttttttattttgtgatttcgtcgtcttcgtgcgacattggtttgttcgtcgt 43929331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 3308905 - 3308937
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgt 230  Q
    |||||||||||||||||||||||||||||||||    
T  3308905 tttcgtgatttcgtcgtcttagtgcgacgttgt 3308937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 15071595 - 15071519
Alignment:
Q  171 tgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||||| | |||||||||||| |||| ||||| || | |||||||| ||||||| |||||| |||||| ||||    
T  15071595 tgattttcacatttatttagtttttacttttgtgatatcatggtcttagtacgacgttattttgttcgtcgtctttg 15071519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 15674021 - 15673953
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgac 225  Q
    |||||||| ||||||||||| | | ||||||| |||| || ||| |||||||| |||||||||||||||    
T  15674021 tttattgaaataagtgatttacccatctatttcgtttctttttttgtgatttcatcgtcttagtgcgac 15673953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 31262988 - 31262936
Alignment:
Q  183 ctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||||||| | ||||||||||||| |||||||||||||  |||||||||    
T  31262988 ctatttagttttctttttcgtgatttcgccgtcttagtgcgagattgttttgt 31262936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 8064799 - 8064748
Alignment:
Q  205 atttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcgatatt 256  Q
    |||||| |||||||||||||| |||||||||  |||||||||| ||||||||    
T  8064799 atttcgacgtcttagtgcgacattgttttgtttgtcgtttttgtgcgatatt 8064748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 14825629 - 14825695
Alignment:
Q  168 aagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttg 234  Q
    ||||||||||||  |||||||| |||||||||| |  ||||| |||| ||||||||||| |||||||    
T  14825629 aagtgattttcatatctatttaattttttcttttgaaatttcatcgttttagtgcgacgatgttttg 14825695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 247
Target Start/End: Complemental strand, 17068927 - 17068885
Alignment:
Q  205 atttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||| |||||||||||||||||||||||||| |||||| ||||    
T  17068927 attttgtcgtcttagtgcgacgttgttttgttcgtcgtctttg 17068885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 10589199 - 10589244
Alignment:
Q  207 ttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    ||||||||||| ||||||||||||||||| |||||| |||| ||||    
T  10589199 ttcgtcgtctttgtgcgacgttgttttgttcgtcgtctttgtgcga 10589244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 36943262 - 36943210
Alignment:
Q  190 gttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||| ||| ||||||||||||||| |||||| |||||| |||| ||||||    
T  36943262 gtttttttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgt 36943210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 10042826 - 10042904
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||    
T  10042826 tttattgaaataagtgattttcacttctatttcgttttttctttcatgatttcgtcgtcttagtgcaacgttgttttgt 10042904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 252
Target Start/End: Complemental strand, 5917788 - 5917707
Alignment:
Q  171 tgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||| ||||    
T  5917788 tgattttcacatctatttcgttttttctttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctttgtgcga 5917707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 12244272 - 12244193
Alignment:
Q  161 ttgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtc 240  Q
    |||||||||||||||||||  | ||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  12244272 ttgatataagtgattttcaaatttatttcgttttttctttcgtgatttcgtcatcttagtgcgacgttgttttgttcgtc 12244193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 16938340 - 16938241
Alignment:
Q  149 tctttcccttta-ttgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||||||  |||| ||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||| ||||| ||| |||||| ||||    
T  16938340 tctttcccttttgttgaaataagtgattttcacatctattttgttttttctttcatgatttcgtcgtcttagtgcgactttgttgtgttcgtcgtatttg 16938241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 32256781 - 32256686
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||||||||||| ||||||||||||| ||||||||||  ||||| |||| ||||    
T  32256781 tttattgaaataagtgattttcacatctatttcgtttttgctttcgtgatttcgccgtcttagtgcgatgttgttttgtttgtcgtctttgtgcga 32256686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 44295370 - 44295465
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  44295370 tttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 44295465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 9270066 - 9270170
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||| ||||| ||||||||||| ||||| |||||| ||||    
T  9270066 tctttcccttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgttgtcttcgtgcgacgttggtttgttcgtcgtctttg 9270165  T
Q  248 cgcga 252  Q
     ||||    
T  9270166 tgcga 9270170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 2628967 - 2629049
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtc 240  Q
    |||||||| ||||||||||||||| |||| || ||||| ||||||||||||||||||| ||||||||||||| |||||||||||    
T  2628967 tttattgaaataagtgattttcacatctactttgtttt-tctttcgtgatttcgtcgttttagtgcgacgttattttgtccgtc 2629049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 13864413 - 13864491
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| ||||||||||||||| ||||||| |||||||| |||||||||  |||| |||||||||||||||||||||    
T  13864413 tttattgaaataagtgattttcacatctatttcgttttttcgttcgtgattctgtcgccttagtgcgacgttgttttgt 13864491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 37719906 - 37719983
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| |||| |||||||||| |||||||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  37719906 tttattgaaataaatgattttcacatctatttcatttt-tctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 37719983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 13977466 - 13977546
Alignment:
Q  167 taagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||||||||| ||||||| |||||||||||| |||||||||| | |||||||||| ||||||||| |||||| ||||    
T  13977466 taagtgattttcacatctatttcgttttttctttcttgatttcgtcattttagtgcgacattgttttgttcgtcgtctttg 13977546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 36545850 - 36545746
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| ||||||| ||| ||||||| |||||||| ||||||||||| |||||  ||||| ||||    
T  36545850 tctttcccttttattgaaataagtgattttcacatctatttcgttttttattttgtgattttgtcgtctttgtgcgacgttggtttgttagtcgtctttg 36545751  T
Q  248 cgcga 252  Q
     ||||    
T  36545750 tgcga 36545746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 31874138 - 31874233
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| ||||||| |||||||| |||| |||||| ||||| |||||| |||| ||||    
T  31874138 tttattgaaataagtgattttcacatctattttgttttttattttgtgattttgtcgtctttgtgcaacgttggtttgttcgtcgtctttgtgcga 31874233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 15665593 - 15665671
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| |||||| |||||||| ||||||| |||||||||||| ||||||||||||||||||| || ||||| ||||    
T  15665593 tttattgaaataagtaattttcacatctatttcgttttttctttcatgatttcgtcgtcttagtgagatgttgtgttgt 15665671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 15827068 - 15827142
Alignment:
Q  161 ttgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||| ||||||  ||||||  ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  15827068 ttgaaataagtagttttcatatctattttgatttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 15827142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 37659020 - 37659110
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||| ||||||||||| ||| ||||||| |||| || ||| |||||||||| ||||||||||||| ||||||||| |||||| ||||    
T  37659020 tttattgaaataagtgatttacacgtctatttcgtttctttttttgtgatttcgttgtcttagtgcgaccttgttttgttcgtcgtctttg 37659110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 31147861 - 31147789
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||||||| ||||||| | ||||| ||| ||||||||||||||||||||||| ||||    
T  31147861 tttattgacataagtgattttcacatctatttcgctttttattttgtgatttcgtcgtcttagtgcgaggttg 31147789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 32412844 - 32412940
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcgat 253  Q
    |||||||| ||||||||||||||| | ||||| ||||||| | | |||||||||||||||| ||||||||||| ||||| | |||| |||| |||||    
T  32412844 tttattgaaataagtgattttcacatttattttgttttttatcttgtgatttcgtcgtcttcgtgcgacgttggtttgttcatcgtctttgtgcgat 32412940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 5989675 - 5989774
Alignment:
Q  149 tctttccctttat-tgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| | ||| ||||||||||||||| ||||||| ||||||| ||| ||||||| ||||| |||||||||||||| | ||| |||||| ||||    
T  5989675 tctttccctttttatgaaataagtgattttcacatctatttcgttttttattttgtgattttgtcgttttagtgcgacgttggtatgttcgtcgtctttg 5989774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 7281184 - 7281097
Alignment:
Q  160 attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||| ||||||||||||||| ||||||| ||||||| ||| ||||||||| |||| ||||||||| ||| ||||| |||||| ||||    
T  7281184 attgaaataagtgattttcacatctattttgttttttattttgtgatttcgccgtcatagtgcgacattggtttgttcgtcgtctttg 7281097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 41996599 - 41996694
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||| ||  ||||||| ||| |||||||| ||||||| ||||||||||| ||||| |||||| |||| ||||    
T  41996599 tttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 41996694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 1215399 - 1215321
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||| | ||||||||||||||| || | |||| |||| |||| |||||||||||||||||||| |||||||||||||    
T  1215399 tttatttaaataagtgattttcacatcgaattaggttttccttttgtgatttcgtcgtcttagtgtgacgttgttttgt 1215321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 16937390 - 16937304
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    ||||||||||| ||| ||||||| |||| || ||| |||||||||||||||||||||||| ||||||||| | |||| |||| ||||    
T  16937390 ataagtgatttacacatctatttcgtttctttttttgtgatttcgtcgtcttagtgcgaccttgttttgttcatcgtctttgtgcga 16937304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 16996953 - 16996876
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||||| ||| |||||||||||||||| |||||||||||    
T  16996953 tttccttttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 16996876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 7269515 - 7269446
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||||||||| ||||||| ||||||| ||| ||||||| |||||| ||||||||||||| |||||    
T  7269515 ataagtgattttcacatctattttgttttttattttgtgattttgtcgtcatagtgcgacgttggtttgt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 17019197 - 17019262
Alignment:
Q  182 tctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| ||||    
T  17019197 tctatttagttttttattttgtgatttggtcgtcttagtgcgacgttggtttgttcgtcgtctttg 17019262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 17549634 - 17549699
Alignment:
Q  182 tctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| ||||    
T  17549634 tctatttagttttttattttgtgatttggtcgtcttagtgcgacgttggtttgttcgtcgtctttg 17549699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 252
Target Start/End: Complemental strand, 8054875 - 8054772
Alignment:
Q  151 tttccctt-tattgatataagtgattttcacttctatttagttttttc-tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgc 248  Q
    |||||||| |||||| ||||||||||||||| ||| ||  |||||||  ||| |||||||||||||||| ||||||||||| ||||| |||||| ||||     
T  8054875 tttcccttatattgaaataagtgattttcacatctgttacgtttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 8054776  T
Q  249 gcga 252  Q
    ||||    
T  8054775 gcga 8054772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 14327533 - 14327628
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||| | |||||||||||| || || | |||| |||| |||| ||||||| ||||||||||||||||||||||||||  ||||| |||| ||||    
T  14327533 tttatttaaataagtgattttaacatcgaattaggttttccttttgtgatttagtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcga 14327628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 31713127 - 31713041
Alignment:
Q  166 ataagtgatttt-cacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||||||| ||| |||||||  |||||||||||||||||| |||||||| |||||| |||||||||| |||||| |||| ||||    
T  31713127 ataagtgatttttcacatctattttattttttctttcgtgattt-gtcgtctttgtgcgatgttgttttgttcgtcgtctttgtgcga 31713041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 32920706 - 32920801
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||| | ||||||||||||||| || | |||| ||||||||| ||||||||||||||||||||| ||  ||||||||  ||||| |||| ||||    
T  32920706 tttatttaaataagtgattttcacatcgaattaggtttttcttttgtgatttcgtcgtcttagtgcaacaatgttttgtttgtcgtctttgtgcga 32920801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 9992710 - 9992811
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttc--gtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttt 245  Q
    ||||||||||| ||||| ||||||||||||||| |||||||  |||| | | ||  |||||||||||||||| ||||||||||| ||||| |||||| ||    
T  9992710 tctttcccttttattgaaataagtgattttcacatctatttcattttgtatctcttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctt 9992809  T
Q  246 tg 247  Q
    ||    
T  9992810 tg 9992811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 11655970 - 11655892
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||| || ||||||||||||| | |||||||  |||||||||| |||||||  || ||||||||||||||||||||||    
T  11655970 tttatcgaaataagtgattttctcatctatttcattttttcttttgtgattttatcatcttagtgcgacgttgttttgt 11655892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 252
Target Start/End: Original strand, 32061845 - 32061943
Alignment:
Q  154 ccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    ||||||||| | ||||||||||||||  |  | |||| |||| |||| ||||||||||||||||||||||||| ||||||||  ||||| |||| ||||    
T  32061845 ccctttatttaaataagtgattttcatattgaattaggttttccttttgtgatttcgtcgtcttagtgcgacgctgttttgtttgtcgtctttgtgcga 32061943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 32104898 - 32104820
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| ||||||||||||||| ||| ||  ||||||| ||| |||||||||||||||| || |||||||| |||||    
T  32104898 tttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtacgacgttggtttgt 32104820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 18890836 - 18890792
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||    
T  18890836 tttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgt 18890792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 39657406 - 39657450
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||    
T  39657406 tttcgtgatttcgtcgtcttagtgcgacgttgtattgttcgtcgt 39657450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 23766794 - 23766888
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||| | ||||||||||||||| | ||||| ||||| ||||||||||||||||| ||||| |||||  || |||||| |||||| |||| ||||    
T  23766794 tttattaaaataagtgattttcacatttatttcgtttt-tctttcgtgatttcgtcatcttaatgcgaaattattttgttcgtcgtctttgtgcga 23766888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 252
Target Start/End: Complemental strand, 12248729 - 12248679
Alignment:
Q  202 gtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  12248729 gtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcga 12248679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 18190916 - 18190826
Alignment:
Q  146 ttatctttccctt-tattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||| ||||||| |||| | ||||||||||||||| || | |||  |||| |||| ||||||||||||||||||||||||  ||||||||    
T  18190916 ttatccttcccttctatttaaataagtgattttcacatcgaattaagttttccttttgtgatttcgtcgtcttagtgcgaccctgttttgt 18190826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 26538951 - 26538901
Alignment:
Q  175 tttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgac 225  Q
    |||||| ||||||| |||||||||||||||||||| | |||||||||||||    
T  26538951 tttcacatctattttgttttttctttcgtgatttccttgtcttagtgcgac 26538901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 37129731 - 37129662
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||||||| ||||||| |  |||| ||| |||||||||||||||| |||||||||||    
T  37129731 tttattgaaataagtgattttcacatctatttcg--ttttattttgtgatttcgtcgtctt-gtgcgacgttg 37129662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 6833543 - 6833606
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||||||| || ||||||| ||||||| ||| ||||||| || |||||||||||| ||||    
T  6833543 ataagtgatttttacatctattttgttttttattttgtgattttgttgtcttagtgcgatgttg 6833606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 12547812 - 12547741
Alignment:
Q  173 attttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgttt 244  Q
    |||||||| | |||||||||| || ||||  ||||||||| ||||||||  |||||||||||| ||||||||    
T  12547812 attttcacatatatttagtttattatttcaagatttcgtcttcttagtgttacgttgttttgttcgtcgttt 12547741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 242
Target Start/End: Complemental strand, 24099387 - 24099344
Alignment:
Q  199 ttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||    
T  24099387 ttcgtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgt 24099344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 3925740 - 3925655
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||| |||| ||| ||||||| |||| || ||| ||||||||||||||||||||| || ||||||| | |||||| |||| ||||    
T  3925740 ataagttatttacacatctatttcgtttctttttt-gtgatttcgtcgtcttagtgcaaccttgtttttttcgtcgtctttgtgcga 3925655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 29013855 - 29013817
Alignment:
Q  169 agtgattttcacttctatttagttttttctttcgtgatt 207  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  29013855 agtgattttcacatctatttagttttttcttttgtgatt 29013817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 31013742 - 31013681
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgtt 228  Q
    ||||||| ||||||| ||||| ||||||||| ||| ||||||||||||||| |||||| ||||    
T  31013742 ataagtggttttcacatctatctagtttttttttt-gtgatttcgtcgtctaagtgcggcgtt 31013681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 5328030 - 5328099
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||||||||| ||||||| ||||||| ||| |||||||| | || || || |||||||| |||||    
T  5328030 ataagtgattttcacatctattttgttttttattttgtgatttctttgttttcgtccgacgttggtttgt 5328099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 14919418 - 14919365
Alignment:
Q  192 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttt 245  Q
    ||||||||||  |||||||||||||||||||||| || ||||||  ||||||||    
T  14919418 tttttctttcaagatttcgtcgtcttagtgcgacattattttgtttgtcgtttt 14919365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 5457158 - 5457210
Alignment:
Q  190 gttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||| ||| |||||||||||||||| ||||||||||| || || ||||||    
T  5457158 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggttagttcgtcgt 5457210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 12356887 - 12356951
Alignment:
Q  171 tgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||||| || | ||||  ||||||||| ||||||||||||||||||| |||  ||||||||    
T  12356887 tgattttcacatcaaattaggattttctttcatgatttcgtcgtcttagtgtgacactgttttgt 12356951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 14585658 - 14585702
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||| ||||||||||||||||| |||||||||| |||| ||||||    
T  14585658 tttcttgatttcgtcgtcttagcgcgacgttgtgttgttcgtcgt 14585702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 26937579 - 26937663
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcg 241  Q
    |||||||| |||||| ||| |||| |||||||||||| ||   |  |||||| |||||||||||||| ||||| ||||| |||||    
T  26937579 tttattgaaataagtaattctcacatctatttagtttctttgattatgattttgtcgtcttagtgcgtcgttggtttgttcgtcg 26937663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 37971210 - 37971286
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||| ||||   |||| || |||| ||||||||||||||| |||||| |||| | |||| ||||||    
T  37971210 ataagtgattttcacatctaccaagttgttccttttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgt 37971286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 35077950 - 35077872
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  35077950 tttattgaaataagtgattttcacatctatttcgttttttctttcgtgatttcgtcgtcttagtacgacgttgttttgt 35077872  T

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Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 52839584 - 52839667
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtc 240  Q
    |||||||| ||||||||||||||| | ||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  52839584 tttattgaaataagtgattttcacatttatttcgttttttctttcgtgattttgtcgtcttagtgcgacgttgttttgttcgtc 52839667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 40488466 - 40488362
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| ||||  ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||  ||||| ||||    
T  40488466 tctttcccttttattgaaataaacgattttcacatctatttcgttttttcttttgtgatttcgtcgtcttagtgcgacgttgttttgtttgtcgtctttg 40488367  T
Q  248 cgcga 252  Q
     ||||    
T  40488366 tgcga 40488362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 10877391 - 10877478
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||||| ||||| | ||||||||||||  ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  10877391 tctttcccttttattgaaaaaagtgattttcatatctatttcgttttttctttcgtgatttcgtcatcttagtgcgacgttgttttgt 10877478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 22344972 - 22344877
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  22344972 tttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 22344877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 27469768 - 27469673
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||| | |||||| |||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | |||| |||| ||||    
T  27469768 tttattaaaataagttattttcacatctatttcgttttttcttttgtgatttcgtcgtcttagtgcgacgttgttttgttcatcgtctttgtgcga 27469673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 12148108 - 12148018
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||| | ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||| ||||||||| ||| |||||||    
T  12148108 tttattcaaataagtgattttcacatctattttgttttttctttcgtgattccgtcgtcttagtgtgactttgttttgttcgttgtttttg 12148018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 253
Target Start/End: Complemental strand, 15276519 - 15276414
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| ||||||| ||| ||||||||||||| || ||||||||||| ||||| |||||| ||||    
T  15276519 tctttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgttttcgtgcgacgttggtttgttcgtcgtctttg 15276420  T
Q  248 cgcgat 253  Q
     |||||    
T  15276419 tgcgat 15276414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 33703569 - 33703475
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||||||||||||||||||||| || |||||||||||  ||||| |||| ||||    
T  33703569 tttattgaaataagtgattttcacatctatttcgttttt-ctttcgtgatttcgtcgtcttagtacggcgttgttttgtttgtcgtctttgtgcga 33703475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 33177657 - 33177579
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| ||||||||||||||| || |||| |||||||||||||||||||| | |||||||||||||||||| ||||    
T  33177657 tttattgaaataagtgattttcacatccatttcgttttttctttcgtgatttcattgtcttagtgcgacgttgtgttgt 33177579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 8893338 - 8893437
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| || ||||||||||||||||| |||||||||| |||| |||| |||  |||||| ||||    
T  8893338 tctttcccttttattgaaataagtgattttcacatctatttcgtcttttctttcgtgatttcatcgtcttagtacgacattgtgttgctcgtcgtctttg 8893437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 32539250 - 32539155
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||| | ||||||| ||||||| ||| ||||||| ||||||||||| |||||||| ||||| |||||| |||| ||||    
T  32539250 tttattgaaataagtgattttcgcatctattttgttttttattttgtgattttgtcgtcttagtacgacgttggtttgttcgtcgtctttgtgcga 32539155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 15698245 - 15698326
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||| |||||||    
T  15698245 tctttcccttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgtcgtctttgtgtgacgttg 15698326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 630845 - 630749
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttc-tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| |||||||  ||| ||||||||||||||||  |||||||||| ||||| |||||| |||| ||||    
T  630845 tttattgaaataagtgattttcacatctatttcgtttttttattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcga 630749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 5832287 - 5832383
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttc-tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| |||||||  ||| ||||||||||||||||  |||||||||| ||||| |||||| |||| ||||    
T  5832287 tttattgaaataagtgattttcacatctatttcgtttttttattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtatttgtgcga 5832383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 14717303 - 14717227
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagtttttt-ctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    |||||||| ||||||||||||||| ||||||| |||||||  ||| |||||||||||||||| ||||||||||||||    
T  14717303 tttattgaaataagtgattttcacatctattttgttttttatttttgtgatttcgtcgtctttgtgcgacgttgttt 14717227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 45659096 - 45659168
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||||||| |||||||  |||||| ||| |||||||||||||||| |||||||||||    
T  45659096 tttattgaaataagtgattttcacatctatttcattttttattttgtgatttcgtcgtctttgtgcgacgttg 45659168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 23039782 - 23039727
Alignment:
Q  185 atttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtc 240  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  23039782 atttagttttttctttcgtgattttgtggtcttagtgcgacgttgttttgttcgtc 23039727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 23257142 - 23257237
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| | ||||| ||||||| | | |||||||| ||||||| ||||||||||| ||||| |||||| |||| ||||    
T  23257142 tttattgaaataagtgattttcacatttattttgttttttatcttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 23257237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 29067095 - 29067193
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| |||||||||| |||| |||||||  | |||||||| |||||||| || |||||||||||||||||||||| |||||| ||||    
T  29067095 tctttcccttttattgaaataagtgattctcacatctatttcttcttttcttt-gtgatttcatcttcttagtgcgacgttgttttgttcgtcgtctttg 29067193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 38646638 - 38646733
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| |||||||||||| || |||||||  |||||| ||| ||||||| |||||||| ||||||||||| ||||| |||||| |||| ||||    
T  38646638 tttattgaaataagtgattttaacatctatttcattttttattttgtgattttgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 38646733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 2350676 - 2350754
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||| | ||||||||||||||| || | |||| |||| |||| ||||||| ||||||||||||||||||||||||||    
T  2350676 tttatttaaataagtgattttcacatcaaattagattttccttttgtgatttagtcgtcttagtgcgacgttgttttgt 2350754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 900176 - 900241
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgc 222  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||    
T  900176 tttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgtcgtctttgtgc 900241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 1768011 - 1768092
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    ||||||||||| ||||| |||| |||||||||| ||||||| ||||||| ||| |||||||||||||||| ||| |||||||    
T  1768011 tctttcccttttattgaaataaatgattttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgtgacgttg 1768092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 27356821 - 27356744
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttg 234  Q
    |||||| | ||||||||||||||| || | |||| ||||| ||||||||||||||| ||||||||| |||||||||||    
T  27356821 tttatttaaataagtgattttcacatcgaattaggtttttttttcgtgatttcgtcatcttagtgcaacgttgttttg 27356744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 4564572 - 4564643
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||| ||| ||||||| ||||||| ||| |||||||||||||||| |||||||||||    
T  4564572 tttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 4564643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 34659698 - 34659614
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    ||||||||||| ||||| | | |||||||| || ||||||| ||||||||||||||||||| || |||||||| |||||||||||    
T  34659698 tctttcccttttattgaaacaggtgatttttacgtctattttgttttttctttcgtgattttgttgtcttagtacgacgttgttt 34659614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 6212946 - 6212871
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    |||||||| ||||||||||||||| ||||| | ||||||| ||| | |||||||||||||| ||||||| ||||||    
T  6212946 tttattgaaataagtgattttcacatctatcttgttttttattttgggatttcgtcgtctttgtgcgacattgttt 6212871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 23320494 - 23320589
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| |||||| |||||||| ||| ||  ||||||| ||| |||||||||||||||| ||| ||||||| ||||| |||||| |||| ||||    
T  23320494 tttattgaaataagtcattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcga 23320589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 34566742 - 34566837
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||| | ||||||||||||||| || | |||| |||| |||| ||||||||||||||||||||||||  ||||||||  ||||| |||| ||||    
T  34566742 tttatttaaataagtgattttcacatcgaattaggttttccttttgtgatttcgtcgtcttagtgcgaccctgttttgtttgtcgtctttgtgcga 34566837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 44562809 - 44562714
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||| ||  ||||| | ||| ||||||||||| |||| ||||||||||| ||||| |||||| |||| ||||    
T  44562809 tttattgaaataagtgattttcacatctgttacgttttatattttgtgatttcgtcatcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 44562714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 13969703 - 13969613
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||| ||||| ||| ||||| ||||||| |||||||  ||| ||||||| ||||||||||||||||||||  ||| |||||| ||||    
T  13969703 tttattgaaataagcgatcttcacatctatttcgtttttttcttcatgatttcatcgtcttagtgcgacgttgtgatgttcgtcgtctttg 13969613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 40992399 - 40992465
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    ||||||||||||||| | ||||| ||||||| ||| ||||||||||| |||| ||||||||||||||    
T  40992399 ataagtgattttcacatttatttcgttttttattttgtgatttcgtcatcttcgtgcgacgttgttt 40992465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 44514049 - 44513971
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| ||||||||||| ||| || |||| |||| || ||| |||| ||||||||||||||||||| |||||||||    
T  44514049 tttattgaaataagtgatttacacatccattttgtttctttttttgtgaattcgtcgtcttagtgcgaccttgttttgt 44513971  T

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Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 16161791 - 16161835
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||    
T  16161791 tttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgt 16161835  T

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Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 46589228 - 46589304
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagtttt-ttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    |||||| | ||||||||||||||| |||| || ||||| ||||||||||||||||||||||| ||||| || |||||    
T  46589228 tttattaaaataagtgattttcacatctactttgtttttttctttcgtgatttcgtcgtctttgtgcggcggtgttt 46589304  T

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Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 48750132 - 48750182
Alignment:
Q  192 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||||||||||||||||||  |||||||||||||||||| |||| ||||||    
T  48750132 tttttctttcgtgatttcgctgtcttagtgcgacgttgtgttgttcgtcgt 48750182  T

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Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 13691809 - 13691740
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||||||||| || | |||| ||| ||||| ||||||||||| ||||||||||||| | ||||||    
T  13691809 ataagtgattttcacatcgaattaggtttctcttttgtgatttcgtcatcttagtgcgacgctattttgt 13691740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 22415454 - 22415374
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagtttttt--ctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||| | |||||||||||| || | ||| |||||||||  |||| || ||||||||||||||||| |||||||||||||    
T  22415454 tttattcaaataagtgatttttacatatatatagttttttttcttttgtaatttcgtcgtcttagtgtgacgttgttttgt 22415374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 21326527 - 21326622
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||| ||  ||||||| |||   |||||||||||||| ||| ||| ||| ||||| |||||| |||| ||||    
T  21326527 tttattgaaataagtgattttcacatctgttgcgttttttattttacgatttcgtcgtcttcgtgtgacattggtttgttcgtcgtctttgtgcga 21326622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 242
Target Start/End: Complemental strand, 22032156 - 22032066
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||| |||||||| ||||||| ||||||| ||| ||| ||||||| ||| || ||||| | |||||||||||| |||| ||||| ||||||    
T  22032156 tttccttttattgaaataagtgtttttcacatctcttttgttttttattttgtaatttctt-gtcttagtgcgatgttggtttgttcgtcgt 22032066  T

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Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 11121063 - 11121113
Alignment:
Q  190 gttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtc 240  Q
    |||||| |||| ||||||||||||||||||||||| ||||| |||| ||||    
T  11121063 gtttttccttttgtgatttcgtcgtcttagtgcgaggttgtgttgttcgtc 11121113  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 7836937 - 7836884
Alignment:
Q  189 agttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||||||||||| |||||||| |||||| |||||| |||||| |||| ||||||    
T  7836937 agttttttcttttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgt 7836884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 26199640 - 26199677
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctattt 188  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  26199640 tttccctttattgaaataagtgattttcacatctattt 26199677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 26199680 - 26199729
Alignment:
Q  203 tgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    ||||||| ||||||||||||||| ||||||||| |||||| |||| ||||    
T  26199680 tgatttcatcgtcttagtgcgacattgttttgttcgtcgtctttgtgcga 26199729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 37662273 - 37662342
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||||||||| || | |||| || || ||| |||||||  | |||||||||||||||||||||||    
T  37662273 ataagtgattttcacatcgaattaggttgtttttttgtgattttattgtcttagtgcgacgttgttttgt 37662342  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 34413229 - 34413185
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||| |||||||||||||||| |||| |||| ||||||    
T  34413229 tttcgtgattttgtcgtcttagtgcgacattgtgttgttcgtcgt 34413185  T

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Target: scaffold0157 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 1210 - 1106
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||||||||||||||| ||||| |||||| ||||    
T  1210 tctttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtatttg 1111  T
Q  248 cgcga 252  Q
     ||||    
T  1110 tgcga 1106  T

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Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 12519701 - 12519805
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||||||||||||||| ||||| |||||| ||||    
T  12519701 tctttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtatttg 12519800  T
Q  248 cgcga 252  Q
     ||||    
T  12519801 tgcga 12519805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 40859700 - 40859795
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||||||||||| |||||||||||||||||||||||| ||| || |||| ||||    
T  40859700 tttattgaaataagtgattttcacatctatttcgtttttgctttcgtgatttcgccgtcttagtgcgacgttgttttgttcgttgtctttgtgcga 40859795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 51646147 - 51646244
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgac-gttgttttgtccgtcgtttttgcgcgat 253  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||  ||||||||| |||||| |||| |||||    
T  51646147 tttattgaaataagtgattttcacatctatttcgttttttctttcgtgatttcgtcgtcttaatgcgacatttgttttgttcgtcgtctttgtgcgat 51646244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 9661907 - 9662002
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  9661907 tttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 9662002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 14542572 - 14542477
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  14542572 tttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 14542477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 15730041 - 15729946
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||| ||||||||||| |||| || ||| |||||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  15730041 tttattgaaataagtgatttacacttctatttcgtttctttttttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcga 15729946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 30416681 - 30416586
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| |||||||   |||||||||||||||||||  ||||||||||||||||||||||| |||||| |||| ||||    
T  30416681 tttattgaaataagtgattttcacatctatttttgtttttctttcgtgatttcgctgtcttagtgcgacgttgttttgttcgtcgtctttgtgcga 30416586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 38434652 - 38434743
Alignment:
Q  157 tttattgatataagtgattttcacttctattt-agttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||| | ||||||||||||||| ||||||| | |||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||    
T  38434652 tttattaaaataagtgattttcacatctattttatttttttcttttgtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttg 38434743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 4634337 - 4634432
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| |||||||  || |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  4634337 tttattgaaataagtgattttcacatctattttgttttttaatttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 4634432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 9474599 - 9474504
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| ||||||||||||| || ||||||||||| ||||| |||||| |||| ||||    
T  9474599 tttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgtcgtattcgtgcgacgttggtttgttcgtcgtctttgtgcga 9474504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 9526408 - 9526314
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| ||||||||||| | ||||| |||| |||||| |||||||||||||| ||||||    
T  9526408 tctttccctttgattgaaataagtgattttcacatctattttgttttttcttttgcgattttgtcgccttagtacgacgttgttttgttcgtcgt 9526314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 28588616 - 28588702
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtt 243  Q
    |||||||| |||| |||||||| | |||||||  ||||||||||||||||||| | ||||||||||||||||||||||| |||||||    
T  28588616 tttattgaaataaatgattttcgcatctatttcattttttctttcgtgatttctttgtcttagtgcgacgttgttttgttcgtcgtt 28588702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 46728980 - 46728890
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||| ||||||||||| ||| ||||||| |||| || ||| |||||||||||||||||||||||| ||||||||| |||||| ||||    
T  46728980 tttattgaaataagtgatttacacgtctatttcgtttctttttttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttg 46728890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 1124996 - 1125080
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||||||| ||||||||||||||| |||||||  |||| |||||||||||||||||||| |||||||| ||||||||||| |||||    
T  1124996 tttattgaaataagtgattttcacatctatttcatttt-tctttcgtgatttcgtcgtcatagtgcgatgttgttttgtctgtcgt 1125080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 23926104 - 23926173
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||||||||| || | |||| |||||||||||||||||||||||||||||||| |||||||||||    
T  23926104 ataagtgattttcacatcgagttaggtttttctttcgtgatttcgtcgtcttagtgcggcgttgttttgt 23926173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 43156830 - 43156914
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcg 241  Q
    |||||||| ||||||||||||||| |||| || |||||||  || ||||||||||||||||||||| |||||||||||| |||||    
T  43156830 tttattgaaataagtgattttcacatctactttgtttttttctttgtgatttcgtcgtcttagtgcaacgttgttttgttcgtcg 43156914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 1657614 - 1657543
Alignment:
Q  169 agtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtc 240  Q
    |||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  1657614 agtgattttcacatctatttcgctttttcttttgtgatttcgtcgtcttagtgcgacattgttttgttcgtc 1657543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 2945182 - 2945269
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| ||||||| ||| |||||||| ||||| ||||||||||||| |||||    
T  2945182 tctttcccttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcatcgtcatagtgcgacgttggtttgt 2945269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 23067908 - 23067813
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||| ||  ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  23067908 tttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 23067813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 4959623 - 4959538
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    ||||||||||||||| |||||||  ||||| |||||||||||||||||||||||| |||| ||||||||| ||| ||||||| ||||    
T  4959623 ataagtgattttcacatctattttattttt-ctttcgtgatttcgtcgtcttagtacgacattgttttgttcgttgtttttgtgcga 4959538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 32189037 - 32189129
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| ||||||| |   |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  32189037 tttattgaaataagtgattttcacatctatttcgtttttttt---gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 32189129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 252
Target Start/End: Complemental strand, 46716960 - 46716859
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgc 250  Q
    ||||| |||||||| ||||||||||||| | ||||||  ||||||| ||| ||||||||||| |||| ||||||||||| ||||| |||||| |||| ||    
T  46716960 tttccttttattgaaataagtgattttcgcatctattacgttttttattttgtgatttcgtcatcttcgtgcgacgttggtttgttcgtcgtctttgtgc 46716861  T
Q  251 ga 252  Q
    ||    
T  46716860 ga 46716859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 46775925 - 46775828
Alignment:
Q  149 tctttcccttta-ttgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttt 245  Q
    |||||||||||| |||| |||||| ||| | || ||||||| ||||||||||| |||||||||||||||||||| ||||||||||  | |||||||||    
T  46775925 tctttccctttaattgaaataagtaattgttacctctattttgttttttcttttgtgatttcgtcgtcttagtgtgacgttgtttaattcgtcgtttt 46775828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 54420778 - 54420698
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||||||    
T  54420778 tttccttttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcgtcgtctttgtgcgacgttgttt 54420698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 31601419 - 31601323
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttc-tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| |||||||  ||| ||||||||||||||||  |||||||||| ||||| |||||| |||| ||||    
T  31601419 tttattgaaataagtgattttcacatctatttcgtttttttattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcga 31601323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 28990352 - 28990430
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| | ||||| |||||| ||||||||||||| |||||    
T  28990352 tttattgaaataagtgattttcacatctattttgttttttattttgggattttgtcgtcatagtgcgacgttggtttgt 28990430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 29257280 - 29257357
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||| | ||||||||||||||||||||||||| ||||| |||| |||||| ||| ||||| ||||||||||||||||    
T  29257280 tttatttaaataagtgattttcacttctatttag-tttttatttcatgattttgtcatcttattgcgacgttgttttgt 29257357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 36804617 - 36804539
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||| | ||||||||||||||  | ||||| ||||||||||| |||||||||||||||||||||| | |||||||||    
T  36804617 tttatttaaataagtgattttcatatatatttggttttttcttttgtgatttcgtcgtcttagtgcggcattgttttgt 36804539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 38170226 - 38170141
Alignment:
Q  151 tttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||| ||||| ||||||||||||||| | ||||| ||||||| |||||||||||| |||||||||||| |  |||||||||    
T  38170226 tttccctttcattgaaataagtgattttcacatttatttcgttttttatttcgtgatttcatcgtcttagtgcaatattgttttgt 38170141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 234
Target Start/End: Original strand, 5388578 - 5388646
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttg 234  Q
    ||||||||||||||| || | |||| |||||||||||||| ||||||||||||||| ||| ||||||||    
T  5388578 ataagtgattttcacatcgaattaggtttttctttcgtgagttcgtcgtcttagtgtgacattgttttg 5388646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 16991926 - 16992021
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| |||||||  |||||| ||||||| ||||  ||| |||||| |||||||||||||  ||||| |||| ||||    
T  16991926 tttattgaaataagtgattttcacatctatttcattttttatttcgtggtttccccgttttagtgtgacgttgttttgtttgtcgtctttgtgcga 16992021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 29589422 - 29589343
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagtttttt-ctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||| | |||||||||||| || |||| || ||||||| |||| || |||||||||||||||||||||||||||||||    
T  29589422 tttattaaaataagtgatttttacatctacttggtttttttcttttgttatttcgtcgtcttagtgcgacgttgttttgt 29589343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 9781857 - 9781795
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgtt 228  Q
    |||||||||| |||| | ||||| |||||||||||||||||||| ||||||||||| ||||||    
T  9781857 ataagtgattatcacatatattttgttttttctttcgtgatttcttcgtcttagtgtgacgtt 9781795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 27651908 - 27651958
Alignment:
Q  192 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||    
T  27651908 tttttctttcgtgatttcgtcgtcttagtgcaacgttgtgttgttcgtcgt 27651958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 36194673 - 36194723
Alignment:
Q  192 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||||||||||||||||||| |||||||||||||||||| |||| ||||||    
T  36194673 tttttctttcgtgatttcgttgtcttagtgcgacgttgtgttgttcgtcgt 36194723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 50003220 - 50003158
Alignment:
Q  173 attttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||| |||||    
T  50003220 attttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgt 50003158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 6408531 - 6408592
Alignment:
Q  191 ttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||||||||||||||| |||||| |||||||||||||| || |||||| |||| ||||    
T  6408531 ttttttctttcgtgatttcgacgtcttggtgcgacgttgtttggttcgtcgtctttgtgcga 6408592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 9549515 - 9549600
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtc 236  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||||| |||  ||||||||||||| | |||| |||||| ||||||    
T  9549515 tttccttttattgaaataagtgatttccacatctatttcgttttttattttttgatttcgtcgtcgtcgtgctacgttggtttgtc 9549600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 11817135 - 11817204
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||||||||| |  | |||  |||||||||||||||||||| |||||||||||||| ||||||||    
T  11817135 ataagtgattttcacattgaattaagtttttctttcgtgatttcgttgtcttagtgcgacgctgttttgt 11817204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 42972092 - 42972177
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||||||| ||||||||||||||| | | ||  ||||||| ||| ||| |||||||||||| ||||||||||| ||||| ||||||    
T  42972092 tttattgaaataagtgattttcacatttgttacgttttttattttgtggtttcgtcgtcttcgtgcgacgttggtttgttcgtcgt 42972177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 242
Target Start/End: Complemental strand, 44375320 - 44375239
Alignment:
Q  161 ttgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||| |||||| |||||||| |||||||  |||||| ||| |||||||||||||||| ||||||||||  ||||| ||||||    
T  44375320 ttgaaataagtaattttcacatctatttctttttttattttgtgatttcgtcgtcttcgtgcgacgttcgtttgttcgtcgt 44375239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 31891426 - 31891382
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||    
T  31891426 tttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgt 31891382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 44021622 - 44021546
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||| ||||| | ||||||| ||| ||||||| ||||||||| || ||||||| ||||| ||||||    
T  44021622 ataagtgattttcacatctatatcgttttttattttgtgattttgtcgtcttaatgtgacgttggtttgttcgtcgt 44021546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 7242829 - 7242734
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||| ||||||||| |||||||  |||||| ||  ||||| | |||||||||||||||||| | ||||| |||||| |||| ||||    
T  7242829 tttattgaaataagcgattttcacatctatttcattttttattctgtgatattgtcgtcttagtgcgacgtcgatttgttcgtcgtctttgtgcga 7242734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 53903664 - 53903738
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    |||||||| ||||||||||| ||| |||||||  |||||| ||| |||||||||||||||| || |||||||||||    
T  53903664 tttattgaaataagtgattt-cacatctatttcattttttattttgtgatttcgtcgtcttcgtacgacgttgttt 53903738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 1621646 - 1621596
Alignment:
Q  192 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||||| ||| | ||||||||||||||| |||||||||||    
T  1621646 tttttctttcgtgattttgtcattttagtgcgacgttgtgttgtccgtcgt 1621596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 26625202 - 26625279
Alignment:
Q  169 agtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||||  |||||||||||||| ||| |||||||||| | ||||||||||  ||||||||| |||||| ||||    
T  26625202 agtgattttcaca-ctatttagttttttgttttgtgatttcgttgccttagtgcgatattgttttgttcgtcgtctttg 26625279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 37869489 - 37869399
Alignment:
Q  146 ttatctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||  |||| | ||  ||||||| ||||||||  |||||||||| |||||    
T  37869489 ttatctttcccttttattgaaataagtgattttcacatctattttattttgtattatgtgattttgtcgtcttcttgcgacgttggtttgt 37869399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 20961505 - 20961575
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||||||| ||||||| |  |||| ||| |||||||| ||||||| |||||||||||    
T  20961505 tttattgaaataagtgattttcacatctatttcg--ttttattttgtgatttcatcgtcttcgtgcgacgttg 20961575  T

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Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 30416603 - 30416558
Alignment:
Q  207 ttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||||    
T  30416603 ttcgtcgtctttgtgcgacgttgttttgttcgtcgtctttgcgcga 30416558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 26576575 - 26576484
Alignment:
Q  146 ttatctttccctttattgatataagtgattttcacttctatttagtttttt--ctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||| |||||||||||| | |||| |||| ||||| ||||||| |||||||  ||||| ||||| | |||||||| ||| ||||||||||||    
T  26576575 ttatatttccctttattcaaataaatgatattcacatctatttcgttttttttctttcatgattgcatcgtcttattgcaacgttgttttgt 26576484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 1008248 - 1008312
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    ||||||||||||||| |  ||||||||||||  ||||||| ||||||||||| ||||||||||||||    
T  1008248 ataagtgattttcacataaatttagtttttttcttcgtga-ttcgtcgtctt-gtgcgacgttgttt 1008312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 4622761 - 4622699
Alignment:
Q  166 ataagtgattttcacttctatttagtt-ttttctttcgtgatttcgtcgtcttagtgcgacgt 227  Q
    ||||||||||| ||| | ||||| ||| |||| ||| ||||||||||||||||||||||||||    
T  4622761 ataagtgatttccacatttatttcgttcttttattttgtgatttcgtcgtcttagtgcgacgt 4622699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 23963780 - 23963838
Alignment:
Q  174 ttttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    ||||||| |||| ||||||||||||||  ||||||| ||||||| |||||| |||||||    
T  23963780 ttttcacatctagttagttttttcttttatgatttcatcgtctttgtgcgatgttgttt 23963838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 34115721 - 34115639
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttc-tttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    ||||||||||| ||||| | |||||||||| |  ||||||| |||||||  ||| |||||||||||||||| |||||||||||    
T  34115721 tctttcccttttattgaaagaagtgatttttatatctatttcgtttttttattttgtgatttcgtcgtcttcgtgcgacgttg 34115639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 38546079 - 38546022
Alignment:
Q  196 tctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcgat 253  Q
    |||||| |||||| ||||||||| ||||||||||| |||| |||||| |||| |||||    
T  38546079 tctttcttgattttgtcgtcttaatgcgacgttgtgttgttcgtcgtctttgtgcgat 38546022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 52555781 - 52555716
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgc 222  Q
    |||||||| ||||||||||||||| ||| ||  ||||||| ||| ||||||| |||||||| ||||    
T  52555781 tttattgaaataagtgattttcacatcttttacgttttttattttgtgattttgtcgtcttcgtgc 52555716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 54481758 - 54481713
Alignment:
Q  188 tagttttttctttcgtgatttcgtcgtcttagtgcgacgttgtttt 233  Q
    |||||||||||||||| ||||||| ||||||||| || ||||||||    
T  54481758 tagttttttctttcgtaatttcgttgtcttagtgggatgttgtttt 54481713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 22300823 - 22300867
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||||||||||||||||||  |||||||||||| |||| ||||||    
T  22300823 tttcgtgatttcgtcgtctgtgtgcgacgttgtgttgttcgtcgt 22300867  T

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Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 29577148 - 29577104
Alignment:
Q  191 ttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||||||||||||  |||||||||||| |||| |||||||    
T  29577148 ttttttctttcgtgattttatcgtcttagtgcaacgtagttttgt 29577104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 31804302 - 31804377
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  31804302 tttattgaaataagtgattttcacatctatttcgttttttctttcgtgatttcgtcgtcttagtgcgacattgttt 31804377  T

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Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 13234168 - 13234073
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  13234168 tttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 13234073  T

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Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 16913385 - 16913454
Alignment:
Q  160 attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    ||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| |||||||||||    
T  16913385 attgaaataagtgattttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 16913454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 12652266 - 12652186
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgtt 231  Q
    ||||| |||||||| ||||||||||||||| ||||||| |  ||||||||||| ||||| |||||||| ||||||||||||    
T  12652266 tttccatttattgaaataagtgattttcacatctatttcgccttttctttcgttatttcatcgtcttattgcgacgttgtt 12652186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 20845053 - 20845157
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| ||||||| ||| ||||||| ||| |||| ||||||| ||| ||||| |||||| ||||    
T  20845053 tctttcccttttattgaaataagtgattttcacatctatttcgttttttattttgtgattttgtcatcttcgtgcgacattggtttgttcgtcgtctttg 20845152  T
Q  248 cgcga 252  Q
     ||||    
T  20845153 tgcga 20845157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 22530325 - 22530412
Alignment:
Q  149 tctttccctttatt-gatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||||||||| || ||||   |||||||| | ||||||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  22530325 tctttccctttatttgaaataacaaattttcacatttatttagttttttctttcgtgatttcgacgtcttagtgagacgttattttgt 22530412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 23843484 - 23843389
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||| | ||||||||||||||| ||| ||  ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  23843484 tttattaaaataagtgattttcacatcttttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 23843389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 32457700 - 32457795
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| |||||||| |||||| | |||||  |||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  32457700 tttattgaaataagtgactttcacatgtatttcattttttattttgtgatttcgtcgtcttcgtgcgacgttgatttgttcgtcgtctttgtgcga 32457795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 8644290 - 8644372
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgt 230  Q
    ||||||||||| ||||| ||||||| ||||||| ||||||| ||||||||||| ||||||| ||| |||||||||||| ||||    
T  8644290 tctttcccttttattgaaataagtgtttttcacatctatttcgttttttcttttgtgattttgtcatcttagtgcgacattgt 8644372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 4663880 - 4663797
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagtt-ttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtc 240  Q
    |||||| | |||||||||||||||  |||||| ||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  4663880 tttattaaaataagtgattttcacaactatttcgttgttttcttt-gtgatttcgtcgtcttagtgcgacgttattttgttcgtc 4663797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 10744634 - 10744732
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttt---tttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||| ||| ||| ||||||| ||||   ||| ||| |||||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  10744634 tttattgaaataagtggtttacacatctattttgtttcttttttttttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcga 10744732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 15128218 - 15128123
Alignment:
Q  149 tctttccctt-tattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||||| |||||| ||||||||||||||| |    || ||||||  ||| |||||||||||||||||||||||||||| ||||| |||||| ||||    
T  15128218 tctttcccttgtattgaaataagtgattttcacct----ttcgtttttaattttgtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtctttg 15128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 32804349 - 32804427
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| ||||||||||||||| ||| ||| ||||||| ||| |||||||| ||||||||||| || |||| |||||    
T  32804349 tttattgaaataagtgattttcacatcttttttgttttttattttgtgatttcatcgtcttagtgagatgttggtttgt 32804427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 33194658 - 33194744
Alignment:
Q  156 ctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||| |||| | |||||||| ||||||| ||||||| ||| ||||||||||||| |||||| || |||| ||||| ||||||    
T  33194658 ctttattgaaataaattattttcacatctattttgttttttattttgtgatttcgtcgtgttagtgtgatgttggtttgttcgtcgt 33194744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 1523359 - 1523403
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||    
T  1523359 tttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgt 1523403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 8633255 - 8633179
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    ||||| |||||||| ||||||||||||||| |||||||  | |||| ||| ||||||||||||| || |||||||||||    
T  8633255 tttccttttattgaaataagtgattttcacatctattt--tgttttattttgtgatttcgtcgttttcgtgcgacgttg 8633179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 253
Target Start/End: Complemental strand, 33541580 - 33541493
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcgat 253  Q
    ||||||||||||||| || | |||| |||| |||| ||||||| |||||||||||| |||| ||||||||  ||||| |||| |||||    
T  33541580 ataagtgattttcacatcgaattaggttttccttttgtgattttgtcgtcttagtgtgacgctgttttgtttgtcgtctttgtgcgat 33541493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 240
Target Start/End: Original strand, 30776623 - 30776665
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtc 240  Q
    ||||||||||||||||||||||||||||||||| |||| ||||    
T  30776623 tttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtc 30776665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 7049291 - 7049371
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    ||||||||||| ||||| ||||||||||||||  ||||||| ||||||| ||| ||||||| ||| |||| |||||||||||    
T  7049291 tctttcccttttattgaaataagtgattttcatatctattt-gttttttgttttgtgattttgtcatcttcgtgcgacgttg 7049371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 14801778 - 14801822
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||||||||||||||||||||||||||| |||| |||| ||||||    
T  14801778 tttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgt 14801822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 1944141 - 1944240
Alignment:
Q  149 tctttccct-ttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||| ||||||| ||||||||||||  | | ||||| ||||||| ||| ||||||| ||||||| ||| | |||||| |||||| ||||| ||||    
T  1944141 tctttccctcttattgaaataagtgatttttgcatttattttgttttttattttgtgattttgtcgtctaagtacaacgttggtttgtctgtcgtctttg 1944240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 19759842 - 19759937
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| | | ||  ||||||| ||| ||||||||||| |||| | ||||||||| ||||| | |||| |||| ||||    
T  19759842 tttattgaaataagtgattttcacatttgttacgttttttattttgtgatttcgtcatcttcgagcgacgttggtttgttcatcgtctttgtgcga 19759937  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 5417213 - 5417168
Alignment:
Q  202 gtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||||||||||| ||||||||||| ||||| |||||| ||||    
T  5417213 gtgatttcgtcgtctttgtgcgacgttggtttgttcgtcgtctttg 5417168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 8406165 - 8406124
Alignment:
Q  168 aagtgattttcacttctatttagttttttctttcgtgatttc 209  Q
    |||||||||| |||| ||||||||||||||||| ||||||||    
T  8406165 aagtgatttttacttatatttagttttttctttggtgatttc 8406124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 545981 - 546025
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||||||||||| |||||||||||||||||||  |||| ||||||    
T  545981 tttcgtgatttcatcgtcttagtgcgacgttgcgttgttcgtcgt 546025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 8102677 - 8102709
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgt 230  Q
    ||||||||||||||||||||||||| |||||||    
T  8102677 tttcgtgatttcgtcgtcttagtgcaacgttgt 8102709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 12576545 - 12576468
Alignment:
Q  151 tttcccttta-ttgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||||| |||| ||||||||||||||| ||||||| |  |||| ||| |||||| ||||||||| ||| |||||||    
T  12576545 tttccctttaattgaaataagtgattttcacatctatttcg--ttttattttgtgattccgtcgtctttgtgtgacgttg 12576468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 31852316 - 31852276
Alignment:
Q  202 gtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||| ||||||||||||| |||| ||||||    
T  31852316 gtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgt 31852276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 6887238 - 6887143
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  6887238 tttattgaaataagtgattttcacatctattttgttttttcttttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 6887143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 22397610 - 22397513
Alignment:
Q  155 cctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| | |||||| |||||||| ||||||| | ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  22397610 cctttattaaaataagtaattttcacatctatttcggtttttcttttgtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcga 22397513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 37425050 - 37425145
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||| | ||||||||||||||||||| |||||||| |||||||||||||||||  ||||| |||| ||||    
T  37425050 tttattgaaataagtgattttcacatctatgttgttttttctttcgtgattttgtcgtctttgtgcgacgttgttttgtttgtcgtctttgtgcga 37425145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 8812211 - 8812121
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||  |||||||||||||  ||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  8812211 tttattgaagtaagtgattttcatatctatttcgtttttgctttcgtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttg 8812121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 34866481 - 34866571
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||| ||||| || |||||  ||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||    
T  34866481 tttattgaaataagcgagtttcatatctatttcgttttttctttcgtgatttcgtcgtcttagtgcgacgttattttgttcgtcgtctttg 34866571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 40774808 - 40774904
Alignment:
Q  153 tccctttattgatataagtgattttcacttctatttagttttttcttt--cgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||||||| ||||||||||||||  |||| || ||||||| |||  |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  40774808 tccctttattgaaataagtgattttcatatctactttgttttttttttttcgtgattttgtcgtcttagtgcgacgttgttttgtccgtcgtctttg 40774904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 232
Target Start/End: Original strand, 15710587 - 15710671
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| |||||||||||| |||||| ||| |||||||||||||||||||    
T  15710587 tctttcccttttattgaaataagtgattttcacatctatttcgttttttctttcatgattttgtcatcttagtgcgacgttgttt 15710671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 41358087 - 41358183
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||| |||||||| |||||| |||||||| |||||||  ||||||| |||||||||| |||||||||||||||| ||||||||| |||||| ||||    
T  41358087 tttccttttattgaaataagttattttcacatctatttcattttttccttcgtgattttgtcgtcttagtgcgacattgttttgttcgtcgtgtttg 41358183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 31645883 - 31645978
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||| ||||||| ||||||||||| ||||| |||||| |||| ||||    
T  31645883 tttattgaaataagtgattttcacatctattttgttttttattttgtgatttcttcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 31645978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 33486629 - 33486534
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||| ||| ||||||| |||| || ||| |||||||||||||||||||||||| ||||||||| |||||| |||| ||||    
T  33486629 tttattgaaataagtgatttacacatctatttcgtttctttttttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcga 33486534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 252
Target Start/End: Original strand, 13007762 - 13007841
Alignment:
Q  173 attttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||||| |||||||||| | |||||| |||| ||||    
T  13007762 attttcacatctatttctttttttctttcgtgatttcgtcgtcttagtgcaacgttgttttattcgtcgtctttgtgcga 13007841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 252
Target Start/End: Original strand, 13079215 - 13079294
Alignment:
Q  173 attttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||||| |||||||||| | |||||| |||| ||||    
T  13079215 attttcacatctatttctttttttctttcgtgatttcgtcgtcttagtgcaacgttgttttattcgtcgtctttgtgcga 13079294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 10924184 - 10924098
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||||||| || ||||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  10924184 ataagtgatttttacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 10924098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 13080223 - 13080297
Alignment:
Q  173 attttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||||| |||||||||| | |||||| ||||    
T  13080223 attttcacatctatttctttttttctttcgtgatttcgtcgtcttagtgcaacgttgttttattcgtcgtctttg 13080297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 232
Target Start/End: Original strand, 28500762 - 28500846
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| ||||||| ||| |||||||| ||||||||||||| | ||||||    
T  28500762 tctttcccttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcttcgtcttagtgcggcattgttt 28500846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 32390707 - 32390635
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| ||||||||||| | ||||||||||||||    
T  32390707 tttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgtcatattagtgcgacgttg 32390635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 35906351 - 35906426
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    |||||||| ||||||||||||||| || |||| ||||||| ||| || ||||||||||||| ||||||||||||||    
T  35906351 tttattgaaataagtgattttcacgtcaattttgttttttattttgtaatttcgtcgtctttgtgcgacgttgttt 35906426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 34843970 - 34844044
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgtt 231  Q
    |||||||| ||||| ||||||||| ||||||| ||||||||||| ||||||| |||||| ||||||||| |||||    
T  34843970 tttattgaaataagcgattttcacatctattttgttttttcttttgtgattttgtcgtcctagtgcgactttgtt 34844044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 41554541 - 41554626
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||||||| ||||||||||| ||| ||||||| |||| || | | |||||||||||||||||||||||| ||||||| | ||||||    
T  41554541 tttattgaaataagtgatttacacatctatttcgtttcttttgtagtgatttcgtcgtcttagtgcgaccttgttttattcgtcgt 41554626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 28618658 - 28618729
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||| ||| ||||||| ||||||| ||| |||||||||||||||| |||||||||||    
T  28618658 tttattgaaataagtgattt-cacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 28618729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 29310409 - 29310319
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| |||     ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  29310409 tttattgaaataagtgattttcacatct-----gttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 29310319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 6647946 - 6647904
Alignment:
Q  184 tatttagttttttctttcgtgatttcgtcgtcttagtgcgacg 226  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  6647946 tatttcgttttttctttcgtgatttcgtcgtcttagtgcgacg 6647904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 20270813 - 20270863
Alignment:
Q  202 gtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  20270813 gtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcga 20270863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 41063456 - 41063378
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| |||| |||||||||| ||||||| ||||||| ||| |||||||||||||||| ||  ||||||| |||||    
T  41063456 tttattgaaataaatgattttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtatgacgttggtttgt 41063378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 2979445 - 2979401
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||    
T  2979445 tttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgt 2979401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 15710336 - 15710292
Alignment:
Q  192 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtc 236  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  15710336 tttttcttttgtgattttgtcgtcttagtgcgacgttgttttgtc 15710292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 20146238 - 20146198
Alignment:
Q  195 ttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  20146238 ttctttcgtgattttgtcgtcttagtgcgacgttgttttgt 20146198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 34873915 - 34873991
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgtttt 233  Q
    |||||||| |||||||| ||  || |||||||  | |||||||||||||||||||||||||| ||||| ||||||||    
T  34873915 tttattgaaataagtgagttatacatctatttcatcttttctttcgtgatttcgtcgtcttaatgcgatgttgtttt 34873991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 6074796 - 6074701
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||| | ||||||||||||||| || | |||| ||||||||  ||||||||||||||||||||| ||  ||||||||  ||||| |||| ||||    
T  6074796 tttatttaaataagtgattttcacatcgaattaggtttttcttctgtgatttcgtcgtcttagtgcaacactgttttgtttgtcgtctttgtgcga 6074701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 35455146 - 35455225
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagtttttt-ctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||| | |||||||||||| || ||||||||||||||| ||||  |||||  ||||||||||| ||||||||||||||    
T  35455146 tttatttaaataagtgatttttacgtctatttagtttttttcttttatgattctgtcgtcttagtccgacgttgttttgt 35455225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 14211170 - 14211220
Alignment:
Q  192 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||| |||||||||||||||||||||||||||| |||| |||| ||||||    
T  14211170 tttttatttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgt 14211220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 40565206 - 40565120
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    ||||||||||||||| |  | |||| |||| |||| ||||||||||||||||||||||||  ||||||||  ||||| |||| ||||    
T  40565206 ataagtgattttcacattgaattaggttttccttttgtgatttcgtcgtcttagtgcgaccatgttttgtttgtcgtctttgtgcga 40565120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 8957265 - 8957326
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtctta 218  Q
    |||||| | ||||||||||||||| || | |||| |||||||||||||||||| ||||||||    
T  8957265 tttatttaaataagtgattttcacatcgaattaggtttttctttcgtgatttcatcgtctta 8957326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 18472790 - 18472710
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    ||||| |||||||  ||||||||||| ||| ||||||| |||| || ||| |||||||||||||||||||| ||| ||||||    
T  18472790 tttccttttattgcaataagtgatttacacatctattttgtttctttttt-gtgatttcgtcgtcttagtgtgactttgttt 18472710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 19103606 - 19103569
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  19103606 tttcgtgatttcgtcgtcttagtgcgacgttgtgttgt 19103569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 34893974 - 34893901
Alignment:
Q  159 tattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    |||||| |||||| |||||||  |||||||  |||||| ||| ||||||| |||||||| ||||||||||||||    
T  34893974 tattgaaataagtaattttcatatctatttcattttttattttgtgattttgtcgtctttgtgcgacgttgttt 34893901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 17326228 - 17326160
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttg 234  Q
    ||||||||||||||| || | |||| |||| |||| |||||||||| |||||||||||||  |||||||    
T  17326228 ataagtgattttcacatcgaattaggttttccttttgtgatttcgttgtcttagtgcgaccatgttttg 17326160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 28541045 - 28541001
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||||||||||| |||||||||||||||||||| |||| ||||||    
T  28541045 tttcgtgatttcatcgtcttagtgcgacgttgtgttgttcgtcgt 28541001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 39591103 - 39591163
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtctt 217  Q
    |||||| | ||||||||||||||  || |||||| ||||||||||||||||||||| ||||    
T  39591103 tttatttaaataagtgattttcaaatcaatttaggtttttctttcgtgatttcgtcttctt 39591163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 2415454 - 2415549
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||  | |||||  |||||| ||| ||||||| ||||||||  |||||||||| ||||| ||| || |||| ||||    
T  2415454 tttattgaaataagtgattttcatatatatttcattttttattttgtgattttgtcgtcttcatgcgacgttggtttgttcgttgtctttgtgcga 2415549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 4726988 - 4726893
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||| ||   ||| || ||| |||||||||||||||| |||||| |||| || || |||||| |||| ||||    
T  4726988 tttattgaaataagtgattttcacatctgttacatttcttattttgtgatttcgtcgtcttcgtgcgatgttggttagttcgtcgtctttgtgcga 4726893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 19646110 - 19646035
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcg 223  Q
    ||||||||||| | ||| ||||||||||||||| ||||||| ||||||| ||| |||||||  ||||||| |||||    
T  19646110 tctttcccttttaatgaaataagtgattttcacatctatttcgttttttattttgtgattttatcgtctttgtgcg 19646035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 4070608 - 4070678
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||||||| | ||||| |  |||| ||| ||||||||||||| || |||||||||||    
T  4070608 tttattgaaataagtgattttcacatttatttcg--ttttattttgtgatttcgtcgtattcgtgcgacgttg 4070678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 28423874 - 28423805
Alignment:
Q  147 tatctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtc 215  Q
    ||||||||||||| ||||| |||| ||||||| |  ||||||| ||||||| ||| ||||||||||||||    
T  28423874 tatctttcccttttattgaaataaatgatttttatatctatttcgttttttattttgtgatttcgtcgtc 28423805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 39567251 - 39567288
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  39567251 tttcgtgatctcgtcgtcttagtgcgacgttgtgttgt 39567288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 41988251 - 41988284
Alignment:
Q  202 gtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||| ||||||||||||||||||||||||||    
T  41988251 gtgattttgtcgtcttagtgcgacgttgttttgt 41988284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 43029737 - 43029832
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  43029737 tttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 43029832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 1165456 - 1165366
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| ||||    
T  1165456 tttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttg 1165366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 36540732 - 36540656
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttg 234  Q
    |||||||| ||||||||||||||| | ||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  36540732 tttattgaaataagtgattttcacatttattttgttttt-ctttcgtgatttcgtcgtcttagtgcgacgttgttttg 36540656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 22844106 - 22844201
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| |||| |||||||| | |||||||  ||||||||||||||||||| ||||||||||||||| ||||||||| |||||| |||| ||||    
T  22844106 tttattgaaataaatgattttcgcatctattttattttttctttcgtgatttcatcgtcttagtgcgacattgttttgttcgtcgtctttgtgcga 22844201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 32089990 - 32089900
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||| ||||||||||||||| |||||||  |||||| ||| |||||||||||||||||||||||| ||  |||||||||||| ||||    
T  32089990 tttattgaaataagtgattttcacatctatttcattttttattttgtgatttcgtcgtcttagtgcgacattactttgtccgtcgtctttg 32089900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 29182677 - 29182573
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| ||||||||||||||  ||||||| ||||||| ||| |||||||||||||||| ||| ||||||| ||||| |||||| ||||    
T  29182677 tctttcccttttattgaaataagtgattttcatatctattttgttttttattttgtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttg 29182578  T
Q  248 cgcga 252  Q
     ||||    
T  29182577 tgcga 29182573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 42106166 - 42106242
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgtttt 233  Q
    |||||||| ||||||||||||||| | ||||| |||||| ||||| |||||||| ||||||||||||||||||||||    
T  42106166 tttattgaaataagtgattttcacatatatttcgtttttgctttcctgatttcgccgtcttagtgcgacgttgtttt 42106242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 53426855 - 53426923
Alignment:
Q  160 attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgtt 228  Q
    ||||| ||||||||||||||| |||||||  |||||||||| |||||||||||||||||||||||||||    
T  53426855 attgaaataagtgattttcacatctatttcattttttcttttgtgatttcgtcgtcttagtgcgacgtt 53426923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 252
Target Start/End: Complemental strand, 913372 - 913281
Alignment:
Q  161 ttgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||| ||||||||||||||| ||||||| |||||| ||||||||||||||  ||||||||||| | ||||||||| |||||| |||| ||||    
T  913372 ttgaaataagtgattttcacatctatttcgtttttgctttcgtgatttcgctgtcttagtgcggcattgttttgttcgtcgtctttgtgcga 913281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 242
Target Start/End: Original strand, 21585947 - 21586038
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||| |||||||| ||||||||||||||| ||||||| ||||||| ||| ||||||||||| |||||||| ||||||| ||| | ||||||    
T  21585947 tttccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcatcttagtgtgacgttgatttattcgtcgt 21586038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 25939539 - 25939461
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||| | |||||| |||||||| ||||||  |||||||||||||||||||||| |||| ||||||||||||||||||    
T  25939539 tttattcaaataagttattttcacatctattctgttttttctttcgtgatttcgttgtctcagtgcgacgttgttttgt 25939461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 247
Target Start/End: Original strand, 39340253 - 39340343
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||| ||||||||||||||| ||||||  |||||||||||||||||||   |||||||||||||| ||||||||  |||||| ||||    
T  39340253 tttattgaaataagtgattttcacatctattccgttttttctttcgtgattttaccgtcttagtgcgactttgttttgctcgtcgtctttg 39340343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 43839587 - 43839493
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| ||||||| ||| ||||||||||| |||| |||||| |||| ||||| ||||||    
T  43839587 tctttcccttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgtcatcttcgtgcgatgttggtttgttcgtcgt 43839493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 54240150 - 54240236
Alignment:
Q  167 taagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcgat 253  Q
    |||||||||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||| || ||| |||| |||||    
T  54240150 taagtgattttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgacgtctttgtgcgat 54240236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 14741394 - 14741313
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    ||||||||||| ||||| ||||||||||||||| |||||||  |||||| ||| |||||||||||||||| |||||||||||    
T  14741394 tctttcccttttattgaaataagtgattttcacatctatttcattttttattttgtgatttcgtcgtcttcgtgcgacgttg 14741313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 47914653 - 47914581
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| | ||||||||||||| ||||||| ||||||| ||| |||||||||||||||| |||||||||||    
T  47914653 tttattgaaaaaagtgattttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 47914581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 21803584 - 21803679
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| | ||||||||||||| ||||||| ||||||| ||| |||||||||| ||||| ||||||| ||| ||||| |||||| |||| ||||    
T  21803584 tttattgaaacaagtgattttcacatctatttcgttttttattttgtgatttcgtagtcttcgtgcgacattggtttgttcgtcgtctttgtgcga 21803679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 3088728 - 3088651
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    ||||| |||||||| ||||||||||| ||| ||||||| ||||||| ||| |||||||||||||||| |||||||||||    
T  3088728 tttccttttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 3088651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 32238064 - 32237966
Alignment:
Q  149 tctttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||||||||||| ||||||||||||||  |||||||  |||||| ||| ||||||| ||| |||| |||||| |||| ||||| |||||| ||||    
T  32238064 tctttccctttattgaaataagtgattttcatatctatttcattttttattttgtgattttgtcatctttgtgcgatgttggtttgttcgtcgtctttg 32237966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 50460246 - 50460323
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| ||||||||||||||| |||||||  |||| ||||||||||||| |||| |||||||||| ||||||||||    
T  50460246 tttattgaaataagtgattttcacatctattttatttt-tctttcgtgattttgtcgccttagtgcgatgttgttttgt 50460323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 30292867 - 30292952
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcg 251  Q
    ||||||||||||||  | |||||| |||||||||||||||||||||||||||||  ||| ||| |||||| | |||| ||||||||    
T  30292867 ataagtgattttcatatttatttaattttttctttcgtgatttcgtcgtcttagcacgatgttattttgttcctcgtctttgcgcg 30292952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 37051688 - 37051753
Alignment:
Q  167 taagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    |||||||||||||| || | |||| |||| |||| |||||||||||||||||||||||||||||||    
T  37051688 taagtgattttcacatcgaattaggttttccttttgtgatttcgtcgtcttagtgcgacgttgttt 37051753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 51741883 - 51741948
Alignment:
Q  171 tgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtc 236  Q
    |||||||||| | ||||||||||| ||||| ||||||| ||||||||||| |||||||||||||||    
T  51741883 tgattttcacatttatttagttttatcttttgtgattttgtcgtcttagtacgacgttgttttgtc 51741948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 4019652 - 4019739
Alignment:
Q  160 attgatataagtgattttcacttctattt-agttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||| ||||| ||| ||||| ||||||| | ||||||||| |||||||||||||||||||||||||||||| |||| |||||| ||||    
T  4019652 attgaaataagcgatcttcacatctatttcacttttttctt-cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctttg 4019739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 41882475 - 41882397
Alignment:
Q  151 tttccctt-tattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| |||||| ||||||||||| ||| ||||||| ||||||| ||| |||||||||||||||| |||||||||||    
T  41882475 tttcccttgtattgaaataagtgattt-cacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 41882397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 20201118 - 20201040
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| ||||||||||||||| ||||||| ||||||| |||  |||||||||||| || ||||||| ||| |||||    
T  20201118 tttattgaaataagtgattttcacatctattttgttttttattttatgatttcgtcgttttcgtgcgacattggtttgt 20201040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 20203300 - 20203222
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||| ||||||||||||||| ||||||| ||||||| |||  |||||||||||| || ||||||| ||| |||||    
T  20203300 tttattgaaataagtgattttcacatctattttgttttttattttatgatttcgtcgttttcgtgcgacattggtttgt 20203222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 1806511 - 1806430
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||| |||||||| || | |||| ||||||||| ||||||||||||||||| ||| ||| ||||||||| ||||| ||||    
T  1806511 ataagttattttcacatcgaattaggtttttcttttgtgatttcgtcgtcttaatgcaacgctgttttgtcggtcgtctttg 1806430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 33076360 - 33076441
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 232  Q
    ||||| |||||||| |||||||||||| || ||||||| ||||||| ||| ||||||| ||||| || ||||||| ||||||    
T  33076360 tttccttttattgaaataagtgatttttacatctatttcgttttttattttgtgattttgtcgttttcgtgcgaccttgttt 33076441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 7546563 - 7546607
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||    
T  7546563 tttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgt 7546607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 14617832 - 14617764
Alignment:
Q  162 tgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgt 230  Q
    |||| ||| |||||||||| |||||||||||||| ||||| || |||| |||||||||||||| |||||    
T  14617832 tgatttaaatgattttcacgtctatttagtttttcctttcatggtttcatcgtcttagtgcgatgttgt 14617764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 25374136 - 25374052
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||| ||| |||| ||||||||||||||| |||||||  |||||| ||| ||||||||  |||||||||||||| ||| |||||    
T  25374136 tttccttttcttgaaataagtgattttcacatctatttcattttttattttgtgatttctccgtcttagtgcgactttggtttgt 25374052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 40365290 - 40365358
Alignment:
Q  167 taagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||||||||| ||||||| ||||||| ||| ||||||| ||| ||||| |||||||||| |||||    
T  40365290 taagtgattttcacatctattttgttttttattttgtgattttgtcatcttaatgcgacgttggtttgt 40365358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 51923670 - 51923718
Alignment:
Q  192 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtc 240  Q
    |||||||||||||||||||||||||||||| |||||||| |||| ||||    
T  51923670 tttttctttcgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtc 51923718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 22893767 - 22893692
Alignment:
Q  166 ataagtgattttcacttctatttagttttttc-tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtc 240  Q
    |||||||||||||||  |||||| |||||||  ||| ||||||||||| |||||||||||||||| ||||| ||||    
T  22893767 ataagtgattttcacacctatttcgtttttttattttgtgatttcgtcttcttagtgcgacgttggtttgttcgtc 22893692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 51303788 - 51303745
Alignment:
Q  192 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||    
T  51303788 tttttctttcgtgatttcgtcgttttagtgcgacgttgtgttgt 51303745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 22286815 - 22286738
Alignment:
Q  151 tttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    ||||| |||||||| |||||| |||| ||| ||||||| ||||||| ||| |||||||||||||||| | |||||||||    
T  22286815 tttccttttattgaaataagtaattt-cacatctatttcgttttttattttgtgatttcgtcgtcttcgcgcgacgttg 22286738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 29776757 - 29776660
Alignment:
Q  149 tctttccctttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||||||| ||| ||||||| ||||||| ||||||| | ||||| ||| ||||||| ||| |||| ||||||||||  ||||| |||||| ||||    
T  29776757 tctttccctttactgaaataagtggttttcacatctatttcg-tttttattttgtgattttgtcatctttgtgcgacgtttgtttgttcgtcgtctttg 29776660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 23673113 - 23673060
Alignment:
Q  187 ttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtc 240  Q
    |||||||||||||| ||||| |||||||||||||  ||| ||||||||||||||    
T  23673113 ttagttttttctttagtgatgtcgtcgtcttagtatgacattgttttgtccgtc 23673060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 24045389 - 24045336
Alignment:
Q  187 ttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtc 240  Q
    |||||||||||||| ||||| |||||||||||||  ||| ||||||||||||||    
T  24045389 ttagttttttctttagtgatgtcgtcgtcttagtatgacattgttttgtccgtc 24045336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 28995366 - 28995296
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| ||||||||||||||| ||||||| |  |||| ||| ||||||| |||||||| |||||||||||    
T  28995366 tttattgaaataagtgattttcacatctatttcg--ttttattttgtgattttgtcgtcttcgtgcgacgttg 28995296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 31629000 - 31628931
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||||||| || | ||||||||||||||||| |||||||| || |||||| ||||| |||| ||||    
T  31629000 ataagtgattttaacatttatttagttttttcttttgtgatttcatcttcttagcgcgacattgtgttgt 31628931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 45664285 - 45664346
Alignment:
Q  167 taagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgtt 228  Q
    |||||||||||||| ||||||| ||||||| ||| |||||||||| ||||| |||| |||||    
T  45664285 taagtgattttcacatctatttcgttttttattttgtgatttcgttgtcttcgtgctacgtt 45664346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 8914661 - 8914705
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||||||||||||||||||||||||||| |||| |||| ||||||    
T  8914661 tttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgt 8914705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 27706365 - 27706321
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    |||||||||||||||||||||||| |||||||| |||| ||||||    
T  27706365 tttcgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcgt 27706321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 40462064 - 40461965
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| ||| | | |||| || ||||||| | ||||| ||| ||||||| ||||||||||||||| |||| ||||| |||||| ||||    
T  40462064 tctttcccttttattgaaatacgcggtttttacatctatttcggtttttattttgtgattttgtcgtcttagtgcgatgttgatttgttcgtcgtctttg 40461965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 21085989 - 21085912
Alignment:
Q  169 agtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    |||||||||||| |||||||  |||||||||| |||||||||| | | | |||| |||||||||||| |||||| ||||    
T  21085989 agtgattttcacatctatttt-ttttttcttttgtgatttcgtagccattgtgcaacgttgttttgttcgtcgtctttg 21085912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 48282802 - 48282752
Alignment:
Q  184 tatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttg 234  Q
    ||||||||||||||||||||||||| ||||| ||  || ||||||||||||    
T  48282802 tatttagttttttctttcgtgattttgtcgttttgatgtgacgttgttttg 48282752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 1220262 - 1220217
Alignment:
Q  202 gtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||| ||||||||||||||| |||||||||| |||||| ||||    
T  1220262 gtgattttgtcgtcttagtgcgatgttgttttgttcgtcgtctttg 1220217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 16235375 - 16235412
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  16235375 tttcgtgatttcatcgtcttagtgcgacgttgtgttgt 16235412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 33977982 - 33977912
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttg 229  Q
    |||||||| |||||||||||| || |||||||  | |||| ||| |||||||| ||||||| |||||||||||    
T  33977982 tttattgaaataagtgatttttacatctattt--tgttttattttgtgatttcatcgtcttcgtgcgacgttg 33977912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 230
Target Start/End: Complemental strand, 21289949 - 21289921
Alignment:
Q  202 gtgatttcgtcgtcttagtgcgacgttgt 230  Q
    |||||||||||||||||||||||||||||    
T  21289949 gtgatttcgtcgtcttagtgcgacgttgt 21289921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 27831168 - 27831244
Alignment:
Q  159 tattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||||| ||||||| ||||||| ||||||  ||||||  ||| |||||||  | ||||||||||||||||| |||||    
T  27831168 tattgaaataagtgtttttcacatctattccgtttttgattttgtgatttttttgtcttagtgcgacgttggtttgt 27831244  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 35670495 - 35670531
Alignment:
Q  184 tatttagttttttctttcgtgatttcgtcgtcttagt 220  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  35670495 tatttagttttttctttcgtgaattcatcgtcttagt 35670531  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 51487059 - 51487103
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||| |||||||| |||||||| |||| ||||||    
T  51487059 tttcgtgatttcgtcatcttagtgggacgttgtgttgttcgtcgt 51487103  T

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Target: scaffold0316 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 12272 - 12168
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||||||| ||||| |||||||||||||||  |||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| ||||    
T  12272 tctttcccttttattgaaataagtgattttcacacctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttg 12173  T
Q  248 cgcga 252  Q
     ||||    
T  12172 tgcga 12168  T

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Target: scaffold0024 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 36583 - 36678
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| |||||||  |||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  36583 tttattgaaataagtgattttcacatctattttattttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 36678  T

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Target: scaffold0018 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 137118 - 137023
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||| ||| |||||||||||| || ||||||| ||||||||||| ||||||||||||||||||| |||||||||||||| | |||| |||| ||||    
T  137118 tttaatgaaataagtgattttaacatctatttcgttttttcttttgtgatttcgtcgtcttagtacgacgttgttttgttcatcgtctttgtgcga 137023  T

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Target: scaffold0340 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 11837 - 11761
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttg 234  Q
    |||||||| ||||||||||||||| ||||||| |||||| ||||||||||||| |||||||||||||| |||||||||    
T  11837 tttattgaaataagtgattttcacatctatttcgttttt-ctttcgtgatttcatcgtcttagtgcgaagttgttttg 11761  T

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Target: scaffold0722 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 5586 - 5491
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||| ||  ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  5586 tttattgaaataagtgattttcacatctgttatgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 5491  T

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Target: scaffold0012 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 244690 - 244785
Alignment:
Q  157 tttattgatataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    |||||||| ||||||||||||||| ||||||| |||||||  || ||||||| |||||||| ||||||| ||| ||||| |||||| |||| ||||    
T  244690 tttattgaaataagtgattttcacatctatttcgttttttagtttgtgattttgtcgtcttcgtgcgaccttggtttgttcgtcgtctttgtgcga 244785  T

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Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 252
Target Start/End: Original strand, 105115 - 105201
Alignment:
Q  166 ataagtgattttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttgcgcga 252  Q
    ||||||||||||||| || | |||| |||||||||||||||||||| ||||||| | |||||||||||||  ||||| |||| ||||    
T  105115 ataagtgattttcacatcgaattaggtttttctttcgtgatttcgttgtcttagcgtgacgttgttttgtttgtcgtctttgtgcga 105201  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 58211 - 58163
Alignment:
Q  198 tttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgttttt 246  Q
    |||||||||||| |||||| |||||| |||||| |||| ||||||||||    
T  58211 tttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgttttt 58163  T

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Target: scaffold0150 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 10354 - 10281
Alignment:
Q  174 ttttcacttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgtttttg 247  Q
    ||||||| ||||||||||||||| ||| ||||||| || ||||||||||||||||| ||||| |||||| ||||    
T  10354 ttttcacatctatttagttttttattttgtgatttggttgtcttagtgcgacgttggtttgttcgtcgtctttg 10281  T

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Target: scaffold0888 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 1823 - 1773
Alignment:
Q  192 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtccgtcgt 242  Q
    ||||||||||||||||||||||||||||||||||||| | |||| ||||||    
T  1823 tttttctttcgtgatttcgtcgtcttagtgcgacgttctgttgttcgtcgt 1773  T

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Target: scaffold1294 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 825 - 889
Alignment:
Q  149 tctttcccttt-attgatataagtgattttcacttctatttagttttttctttcgtgatttcgtc 212  Q
    ||||||||||| ||||| |||||||  |||||| ||||||| |||||||||| ||||||||||||    
T  825 tctttcccttttattgaaataagtggctttcacatctatttcgttttttcttccgtgatttcgtc 889  T

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Target: scaffold0112 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 25546 - 25498
Alignment:
Q  187 ttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 235  Q
    |||| ||||||||||||||||| | ||||||||||||||| ||||||||    
T  25546 ttaggtttttctttcgtgattttgacgtcttagtgcgacgctgttttgt 25498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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