View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17240_high_1 (Length: 667)

Name: NF17240_high_1
Description: NF17240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17240_high_1
NF17240_high_1
[»] chr3 (66 HSPs)
chr3 (243-651)||(35232464-35232877)
chr3 (4-174)||(35232946-35233116)
chr3 (4-174)||(35154989-35155159)
chr3 (4-169)||(36231868-36232033)
chr3 (4-174)||(19942285-19942455)
chr3 (4-174)||(44353600-44353770)
chr3 (4-174)||(49779076-49779246)
chr3 (4-169)||(28411953-28412118)
chr3 (4-174)||(48585331-48585501)
chr3 (4-166)||(7680442-7680603)
chr3 (16-168)||(14279569-14279721)
chr3 (4-162)||(2612546-2612704)
chr3 (4-174)||(52343481-52343650)
chr3 (19-174)||(30419403-30419558)
chr3 (8-174)||(4595760-4595925)
chr3 (35-169)||(38144458-38144592)
chr3 (33-159)||(24200184-24200310)
chr3 (53-174)||(41589435-41589556)
chr3 (4-93)||(36840010-36840098)
chr3 (16-112)||(8947233-8947329)
chr3 (51-140)||(52813682-52813771)
chr3 (88-173)||(36835504-36835589)
chr3 (17-116)||(23483149-23483248)
chr3 (23-91)||(22781271-22781339)
chr3 (23-91)||(24395756-24395824)
chr3 (25-144)||(47097625-47097744)
chr3 (16-147)||(54556808-54556934)
chr3 (16-97)||(39626275-39626356)
chr3 (23-91)||(85209-85277)
chr3 (23-91)||(672630-672698)
chr3 (23-91)||(4515467-4515535)
chr3 (23-91)||(7678831-7678899)
chr3 (23-91)||(10840856-10840924)
chr3 (23-91)||(10999214-10999282)
chr3 (23-91)||(20834973-20835041)
chr3 (20-116)||(31608214-31608310)
chr3 (23-91)||(33712145-33712213)
chr3 (23-91)||(38871682-38871750)
chr3 (23-91)||(53974839-53974907)
chr3 (23-91)||(6267755-6267823)
chr3 (23-91)||(20048865-20048933)
chr3 (23-91)||(32236857-32236925)
chr3 (23-91)||(33967476-33967544)
chr3 (23-91)||(40585586-40585654)
chr3 (23-105)||(7149416-7149497)
chr3 (244-285)||(2612423-2612464)
chr3 (49-117)||(33393140-33393211)
chr3 (23-91)||(36430872-36430941)
chr3 (23-91)||(41070440-41070509)
chr3 (23-91)||(4044239-4044307)
chr3 (23-91)||(20656716-20656784)
chr3 (23-91)||(26090912-26090980)
chr3 (243-285)||(24200393-24200435)
chr3 (243-285)||(28412192-28412234)
chr3 (244-285)||(11124566-11124607)
chr3 (244-285)||(52343719-52343760)
chr3 (23-91)||(37971135-37971203)
chr3 (243-285)||(36835396-36835438)
chr3 (243-285)||(48585570-48585612)
chr3 (244-285)||(7680323-7680364)
chr3 (50-91)||(25711512-25711553)
chr3 (244-285)||(44353488-44353529)
chr3 (244-285)||(52813874-52813915)
chr3 (76-116)||(24989786-24989826)
chr3 (246-282)||(35154883-35154919)
chr3 (245-285)||(36231752-36231792)
[»] chr8 (62 HSPs)
chr8 (4-174)||(4006414-4006584)
chr8 (4-174)||(38235083-38235253)
chr8 (4-174)||(4230036-4230206)
chr8 (4-174)||(31793018-31793188)
chr8 (16-174)||(38459319-38459477)
chr8 (4-174)||(44026239-44026409)
chr8 (16-174)||(6241-6399)
chr8 (4-174)||(38946445-38946615)
chr8 (4-174)||(11266775-11266945)
chr8 (4-162)||(44704026-44704184)
chr8 (16-168)||(41941350-41941502)
chr8 (4-174)||(12723077-12723245)
chr8 (4-174)||(35329051-35329221)
chr8 (4-174)||(42687162-42687332)
chr8 (25-174)||(38167791-38167940)
chr8 (4-162)||(28152034-28152191)
chr8 (4-174)||(33771935-33772105)
chr8 (37-159)||(36056947-36057069)
chr8 (42-174)||(44025389-44025520)
chr8 (49-174)||(39713277-39713402)
chr8 (16-174)||(44696221-44696379)
chr8 (3-117)||(7969379-7969493)
chr8 (23-91)||(17602204-17602272)
chr8 (23-91)||(37578781-37578849)
chr8 (49-159)||(5346872-5346985)
chr8 (16-105)||(7988123-7988212)
chr8 (16-116)||(1848402-1848502)
chr8 (23-91)||(3032392-3032460)
chr8 (23-91)||(5599341-5599409)
chr8 (23-91)||(8376777-8376845)
chr8 (23-91)||(15840351-15840419)
chr8 (23-91)||(24822182-24822250)
chr8 (23-91)||(26122059-26122127)
chr8 (23-91)||(26290227-26290295)
chr8 (23-91)||(26303484-26303552)
chr8 (23-91)||(26315478-26315546)
chr8 (23-91)||(28884856-28884924)
chr8 (23-91)||(28910532-28910600)
chr8 (23-91)||(34564512-34564580)
chr8 (23-91)||(35605897-35605965)
chr8 (23-91)||(39365840-39365908)
chr8 (23-91)||(42512741-42512809)
chr8 (25-91)||(43663799-43663865)
chr8 (23-91)||(3136692-3136760)
chr8 (23-91)||(5988707-5988775)
chr8 (35-111)||(26991927-26992003)
chr8 (16-116)||(35979430-35979530)
chr8 (25-116)||(44953653-44953744)
chr8 (24-94)||(40184592-40184662)
chr8 (23-82)||(23356715-23356774)
chr8 (243-285)||(33772174-33772216)
chr8 (243-285)||(36056822-36056864)
chr8 (243-285)||(38167680-38167722)
chr8 (244-285)||(4006654-4006695)
chr8 (244-285)||(28152271-28152312)
chr8 (25-82)||(32911010-32911067)
chr8 (244-285)||(41941233-41941274)
chr8 (245-285)||(4230277-4230317)
chr8 (244-280)||(31792912-31792948)
chr8 (243-285)||(38459208-38459250)
chr8 (244-285)||(42687051-42687092)
chr8 (243-279)||(44025589-44025625)
[»] chr4 (76 HSPs)
chr4 (4-174)||(1523504-1523674)
chr4 (4-169)||(36852376-36852541)
chr4 (4-174)||(13961659-13961829)
chr4 (4-174)||(35338916-35339086)
chr4 (4-174)||(22847656-22847826)
chr4 (4-162)||(32933331-32933489)
chr4 (4-162)||(37829576-37829734)
chr4 (4-174)||(41201633-41201803)
chr4 (4-174)||(43457580-43457750)
chr4 (8-174)||(51323200-51323366)
chr4 (16-174)||(3025591-3025749)
chr4 (4-174)||(7318839-7319009)
chr4 (4-174)||(3027151-3027323)
chr4 (4-159)||(48639-48794)
chr4 (4-162)||(11691535-11691693)
chr4 (4-174)||(30215082-30215252)
chr4 (4-174)||(34160036-34160206)
chr4 (1-168)||(10480608-10480774)
chr4 (8-159)||(20292615-20292766)
chr4 (4-174)||(47466734-47466904)
chr4 (4-174)||(48991088-48991258)
chr4 (4-174)||(50469706-50469875)
chr4 (4-162)||(40430949-40431108)
chr4 (4-166)||(24035171-24035333)
chr4 (4-174)||(47429014-47429184)
chr4 (4-162)||(43620943-43621102)
chr4 (4-144)||(15659155-15659296)
chr4 (53-174)||(8713850-8713971)
chr4 (53-174)||(37682583-37682704)
chr4 (16-105)||(15506403-15506492)
chr4 (49-174)||(24897536-24897664)
chr4 (23-105)||(53874494-53874575)
chr4 (23-91)||(20434669-20434737)
chr4 (23-91)||(20738304-20738372)
chr4 (23-91)||(23894658-23894726)
chr4 (23-91)||(25858219-25858287)
chr4 (23-91)||(31710402-31710470)
chr4 (23-91)||(39539930-39539998)
chr4 (23-91)||(42349257-42349325)
chr4 (23-91)||(46563946-46564014)
chr4 (23-91)||(52912623-52912691)
chr4 (23-91)||(55182990-55183058)
chr4 (23-91)||(56017911-56017979)
chr4 (23-105)||(37233623-37233704)
chr4 (28-116)||(1536800-1536887)
chr4 (23-91)||(10541579-10541647)
chr4 (53-174)||(32136114-32136227)
chr4 (23-91)||(42723604-42723672)
chr4 (23-87)||(55215070-55215134)
chr4 (23-87)||(55220424-55220488)
chr4 (244-285)||(11691775-11691816)
chr4 (37-94)||(48348802-48348859)
chr4 (23-91)||(52839185-52839253)
chr4 (23-91)||(56363260-56363328)
chr4 (243-285)||(34160275-34160317)
chr4 (243-285)||(43457469-43457511)
chr4 (244-285)||(10480491-10480532)
chr4 (23-91)||(38291355-38291424)
chr4 (244-285)||(47466622-47466663)
chr4 (16-123)||(7818284-7818392)
chr4 (243-283)||(43620822-43620862)
chr4 (243-282)||(3027392-3027431)
chr4 (246-285)||(41201521-41201560)
chr4 (243-285)||(3025480-3025522)
chr4 (243-285)||(7319079-7319121)
chr4 (247-285)||(37829818-37829856)
chr4 (243-285)||(47428894-47428936)
chr4 (243-285)||(48991319-48991361)
chr4 (244-285)||(8714041-8714082)
chr4 (244-285)||(13961549-13961590)
chr4 (248-285)||(20292489-20292526)
chr4 (23-91)||(28405909-28405978)
chr4 (248-285)||(40431194-40431231)
chr4 (244-285)||(50469945-50469986)
chr4 (55-91)||(614416-614452)
chr4 (4-40)||(50562032-50562068)
[»] chr5 (58 HSPs)
chr5 (4-169)||(4621866-4622031)
chr5 (4-169)||(6245933-6246098)
chr5 (4-169)||(18865249-18865414)
chr5 (4-169)||(40739842-40740007)
chr5 (4-174)||(7339493-7339663)
chr5 (4-174)||(15271939-15272109)
chr5 (4-174)||(10552868-10553038)
chr5 (4-174)||(37106697-37106868)
chr5 (4-174)||(8233252-8233422)
chr5 (4-174)||(10665397-10665567)
chr5 (4-174)||(41881114-41881284)
chr5 (16-174)||(42436566-42436724)
chr5 (4-174)||(43547826-43547996)
chr5 (4-169)||(18979147-18979312)
chr5 (4-174)||(24478102-24478272)
chr5 (10-174)||(37274033-37274197)
chr5 (4-159)||(38768972-38769127)
chr5 (4-174)||(13210281-13210452)
chr5 (4-174)||(8048068-8048238)
chr5 (16-174)||(18522697-18522854)
chr5 (4-154)||(31499510-31499657)
chr5 (37-159)||(37341548-37341670)
chr5 (4-99)||(31485344-31485439)
chr5 (48-174)||(27309643-27309772)
chr5 (23-91)||(13145350-13145418)
chr5 (23-91)||(19034181-19034249)
chr5 (23-91)||(19617063-19617131)
chr5 (23-91)||(24559651-24559719)
chr5 (23-91)||(24600684-24600752)
chr5 (23-91)||(25085559-25085627)
chr5 (23-91)||(25143531-25143599)
chr5 (23-91)||(29920999-29921067)
chr5 (23-91)||(31510903-31510971)
chr5 (23-91)||(33281409-33281477)
chr5 (23-91)||(37866432-37866500)
chr5 (23-91)||(43517753-43517821)
chr5 (23-87)||(4155608-4155672)
chr5 (23-91)||(9066240-9066308)
chr5 (16-117)||(29385679-29385782)
chr5 (23-91)||(43293143-43293211)
chr5 (23-91)||(6469163-6469230)
chr5 (23-91)||(38759854-38759922)
chr5 (16-67)||(12188684-12188735)
chr5 (243-285)||(4622104-4622146)
chr5 (243-285)||(10665285-10665327)
chr5 (243-285)||(13210170-13210212)
chr5 (243-285)||(18522923-18522965)
chr5 (243-285)||(18979386-18979428)
chr5 (243-285)||(37341753-37341795)
chr5 (243-285)||(41881003-41881045)
chr5 (244-285)||(37273922-37273963)
chr5 (245-285)||(40740083-40740123)
chr5 (243-286)||(31485569-31485612)
chr5 (28-91)||(35318796-35318859)
chr5 (17-68)||(36294637-36294688)
chr5 (247-285)||(42436455-42436493)
chr5 (244-285)||(15021278-15021319)
chr5 (244-285)||(38769215-38769256)
[»] chr7 (74 HSPs)
chr7 (4-174)||(20493397-20493567)
chr7 (4-174)||(29042590-29042760)
chr7 (4-174)||(47540997-47541167)
chr7 (4-169)||(48613532-48613697)
chr7 (4-174)||(242208-242378)
chr7 (4-174)||(24981551-24981721)
chr7 (4-174)||(42435726-42435896)
chr7 (4-168)||(25226141-25226304)
chr7 (4-174)||(12846752-12846922)
chr7 (4-174)||(40863081-40863251)
chr7 (4-174)||(47011018-47011188)
chr7 (1-162)||(40304902-40305063)
chr7 (4-174)||(46102398-46102569)
chr7 (4-174)||(7883190-7883360)
chr7 (18-174)||(43501512-43501668)
chr7 (4-174)||(10594709-10594878)
chr7 (4-174)||(45869584-45869754)
chr7 (4-162)||(43776991-43777149)
chr7 (4-168)||(48873753-48873916)
chr7 (4-174)||(30172929-30173097)
chr7 (16-162)||(39597055-39597201)
chr7 (4-174)||(44709290-44709459)
chr7 (4-162)||(36688040-36688198)
chr7 (4-82)||(12429520-12429598)
chr7 (21-146)||(19020592-19020718)
chr7 (16-115)||(41469564-41469663)
chr7 (16-131)||(48642422-48642536)
chr7 (84-168)||(25236053-25236136)
chr7 (53-174)||(19474929-19475050)
chr7 (23-91)||(32541590-32541658)
chr7 (23-91)||(7901023-7901091)
chr7 (23-91)||(21873955-21874023)
chr7 (23-91)||(27325422-27325490)
chr7 (23-91)||(32661779-32661847)
chr7 (23-91)||(40704917-40704985)
chr7 (23-91)||(40994310-40994378)
chr7 (23-91)||(40995745-40995813)
chr7 (25-105)||(42094947-42095027)
chr7 (23-91)||(43246437-43246505)
chr7 (23-91)||(46321518-46321586)
chr7 (23-91)||(46924460-46924528)
chr7 (23-91)||(7791436-7791504)
chr7 (23-91)||(8215123-8215191)
chr7 (23-91)||(19699578-19699646)
chr7 (23-91)||(21278463-21278531)
chr7 (23-91)||(25877360-25877428)
chr7 (23-91)||(26015296-26015364)
chr7 (23-91)||(35924687-35924755)
chr7 (23-91)||(47065346-47065414)
chr7 (23-91)||(47778965-47779033)
chr7 (26-91)||(38283126-38283191)
chr7 (243-285)||(7883079-7883121)
chr7 (243-285)||(10594947-10594989)
chr7 (243-285)||(20493637-20493679)
chr7 (243-285)||(42435615-42435657)
chr7 (243-285)||(44709178-44709220)
chr7 (243-285)||(47541237-47541279)
chr7 (243-285)||(48613771-48613813)
chr7 (16-113)||(21203000-21203097)
chr7 (244-285)||(30172815-30172856)
chr7 (43-116)||(34012770-34012843)
chr7 (243-282)||(46102634-46102673)
chr7 (244-286)||(36687915-36687957)
chr7 (66-116)||(37544862-37544912)
chr7 (244-285)||(12846641-12846682)
chr7 (244-285)||(19475120-19475161)
chr7 (244-285)||(24981791-24981832)
chr7 (23-91)||(34592267-34592333)
chr7 (50-91)||(39073850-39073891)
chr7 (244-285)||(39596931-39596972)
chr7 (43-116)||(45236509-45236582)
chr7 (244-285)||(47011258-47011299)
chr7 (243-284)||(48873637-48873678)
chr7 (55-91)||(38875556-38875592)
[»] chr1 (69 HSPs)
chr1 (4-174)||(13073751-13073921)
chr1 (4-170)||(29921156-29921322)
chr1 (4-174)||(46290987-46291157)
chr1 (4-174)||(48933927-48934097)
chr1 (4-174)||(51001297-51001467)
chr1 (4-174)||(32087125-32087295)
chr1 (4-174)||(41713479-41713649)
chr1 (4-168)||(19247171-19247335)
chr1 (4-174)||(26308215-26308385)
chr1 (4-169)||(5673510-5673675)
chr1 (5-162)||(23443574-23443731)
chr1 (4-169)||(35274475-35274640)
chr1 (4-174)||(32117338-32117508)
chr1 (16-174)||(32562075-32562234)
chr1 (4-174)||(17702638-17702808)
chr1 (11-174)||(8113138-8113301)
chr1 (4-162)||(6015891-6016049)
chr1 (4-162)||(17475024-17475182)
chr1 (4-162)||(40499181-40499339)
chr1 (4-174)||(12602550-12602718)
chr1 (4-174)||(45942077-45942247)
chr1 (4-169)||(19513487-19513651)
chr1 (16-174)||(1702459-1702617)
chr1 (4-117)||(14289617-14289730)
chr1 (16-115)||(1441968-1442067)
chr1 (87-174)||(9640011-9640098)
chr1 (35-123)||(45926088-45926177)
chr1 (21-129)||(24663648-24663756)
chr1 (23-91)||(2482120-2482188)
chr1 (23-91)||(14246709-14246777)
chr1 (23-91)||(18909731-18909799)
chr1 (23-91)||(20582153-20582221)
chr1 (23-91)||(24317736-24317804)
chr1 (53-174)||(24527024-24527147)
chr1 (23-91)||(26163989-26164057)
chr1 (23-91)||(39568845-39568913)
chr1 (23-91)||(39982927-39982995)
chr1 (23-91)||(49823756-49823824)
chr1 (23-91)||(51290837-51290905)
chr1 (23-91)||(51676682-51676750)
chr1 (49-174)||(3486366-3486494)
chr1 (23-91)||(2137829-2137897)
chr1 (53-174)||(7009658-7009771)
chr1 (23-91)||(11172813-11172881)
chr1 (23-91)||(40400581-40400649)
chr1 (23-91)||(42948747-42948815)
chr1 (23-91)||(44722462-44722530)
chr1 (23-91)||(52025207-52025275)
chr1 (23-91)||(52043863-52043931)
chr1 (25-116)||(1701471-1701562)
chr1 (23-105)||(13234776-13234857)
chr1 (23-91)||(34270231-34270299)
chr1 (243-285)||(8113027-8113069)
chr1 (243-285)||(9639898-9639940)
chr1 (243-285)||(17702876-17702918)
chr1 (243-285)||(23443464-23443506)
chr1 (243-284)||(32562303-32562344)
chr1 (244-285)||(51001186-51001227)
chr1 (245-285)||(29921041-29921081)
chr1 (43-91)||(34276466-34276514)
chr1 (23-91)||(40536116-40536184)
chr1 (44-91)||(28852297-28852344)
chr1 (243-285)||(19513371-19513413)
chr1 (243-285)||(32087367-32087409)
chr1 (243-281)||(41713718-41713756)
chr1 (243-285)||(45942316-45942358)
chr1 (248-285)||(17475268-17475305)
chr1 (23-91)||(50728414-50728480)
chr1 (76-123)||(9263495-9263543)
[»] chr6 (33 HSPs)
chr6 (4-174)||(8525852-8526022)
chr6 (4-174)||(31090555-31090725)
chr6 (4-174)||(6926449-6926619)
chr6 (4-174)||(29622684-29622854)
chr6 (8-174)||(5715490-5715655)
chr6 (4-161)||(13444555-13444712)
chr6 (4-174)||(29880735-29880904)
chr6 (4-162)||(34085079-34085236)
chr6 (4-162)||(11368155-11368313)
chr6 (16-167)||(18024748-18024898)
chr6 (19-116)||(6675257-6675354)
chr6 (16-144)||(7082113-7082242)
chr6 (16-174)||(17314880-17315031)
chr6 (16-144)||(8810114-8810243)
chr6 (49-174)||(32173007-32173139)
chr6 (23-91)||(18894301-18894369)
chr6 (32-112)||(26947222-26947302)
chr6 (23-90)||(6167446-6167513)
chr6 (23-91)||(3095103-3095171)
chr6 (31-91)||(13889504-13889564)
chr6 (31-91)||(25332347-25332407)
chr6 (23-91)||(29121813-29121881)
chr6 (23-91)||(29629960-29630028)
chr6 (25-91)||(6625892-6625958)
chr6 (25-91)||(7141772-7141838)
chr6 (63-116)||(14253161-14253214)
chr6 (243-285)||(34084956-34084998)
chr6 (246-285)||(34084701-34084740)
chr6 (243-285)||(5715724-5715766)
chr6 (243-285)||(6926688-6926730)
chr6 (243-285)||(31090443-31090485)
chr6 (244-285)||(8526092-8526133)
chr6 (243-284)||(11368033-11368074)
[»] chr2 (41 HSPs)
chr2 (4-174)||(16312906-16313076)
chr2 (4-169)||(4072680-4072845)
chr2 (16-169)||(4330820-4330973)
chr2 (4-167)||(8034053-8034216)
chr2 (4-162)||(26171742-26171900)
chr2 (4-169)||(7721824-7721989)
chr2 (4-174)||(10522252-10522421)
chr2 (4-162)||(44456139-44456297)
chr2 (4-174)||(13479751-13479921)
chr2 (16-169)||(38628355-38628508)
chr2 (4-159)||(31568987-31569141)
chr2 (19-174)||(31639816-31639972)
chr2 (55-162)||(40658594-40658701)
chr2 (52-174)||(45442942-45443067)
chr2 (49-117)||(44799325-44799396)
chr2 (23-91)||(1482423-1482491)
chr2 (23-91)||(1520775-1520843)
chr2 (23-91)||(2390128-2390196)
chr2 (23-91)||(3178797-3178865)
chr2 (23-91)||(10639293-10639361)
chr2 (23-91)||(13195648-13195716)
chr2 (23-91)||(21658477-21658545)
chr2 (23-91)||(27980399-27980467)
chr2 (23-91)||(34202861-34202929)
chr2 (23-91)||(37094620-37094688)
chr2 (23-91)||(39697273-39697341)
chr2 (23-91)||(40811183-40811251)
chr2 (23-91)||(42343518-42343586)
chr2 (23-91)||(43577489-43577557)
chr2 (23-91)||(44143966-44144034)
chr2 (35-116)||(35006299-35006380)
chr2 (23-91)||(25852847-25852915)
chr2 (243-285)||(31568889-31568931)
chr2 (23-91)||(28066929-28066997)
chr2 (243-287)||(44456014-44456058)
chr2 (244-285)||(4072564-4072605)
chr2 (244-285)||(45442831-45442872)
chr2 (245-285)||(4330704-4330744)
chr2 (43-91)||(35896332-35896380)
chr2 (247-285)||(7721711-7721749)
chr2 (245-285)||(38628239-38628279)
[»] scaffold0847 (1 HSPs)
scaffold0847 (4-174)||(110-280)
[»] scaffold0003 (1 HSPs)
scaffold0003 (4-162)||(365179-365335)
[»] scaffold0578 (2 HSPs)
scaffold0578 (4-169)||(9288-9451)
scaffold0578 (243-285)||(9525-9567)
[»] scaffold0007 (3 HSPs)
scaffold0007 (4-122)||(200482-200600)
scaffold0007 (23-91)||(156544-156612)
scaffold0007 (244-285)||(200772-200813)
[»] scaffold0855 (1 HSPs)
scaffold0855 (60-174)||(1-115)
[»] scaffold0570 (1 HSPs)
scaffold0570 (17-116)||(3866-3965)
[»] scaffold0672 (2 HSPs)
scaffold0672 (76-174)||(6899-6997)
scaffold0672 (247-285)||(6788-6826)
[»] scaffold0438 (1 HSPs)
scaffold0438 (23-91)||(1564-1632)
[»] scaffold0391 (1 HSPs)
scaffold0391 (23-91)||(4569-4637)
[»] scaffold0065 (1 HSPs)
scaffold0065 (23-91)||(37533-37601)
[»] scaffold0368 (1 HSPs)
scaffold0368 (23-91)||(14420-14488)
[»] scaffold0062 (1 HSPs)
scaffold0062 (23-91)||(41084-41152)


Alignment Details
Target: chr3 (Bit Score: 290; Significance: 1e-162; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 243 - 651
Target Start/End: Complemental strand, 35232877 - 35232464
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactccggataaaaatcaacttggctcgtgcaatagaatcaagaaagtgtatttttattttg 342  Q
    |||| |||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35232877 ctggatgtaaccagaaatatataaggtgtgaatagaaaaactccggataaaaatcaacttgactcgtgcaatagaatcaagaaagtgtatttttattttg 35232778  T
Q  343 tcnnnnnnnnnnnnn-----gtgtatttttattgattctaaacaaattgaaatacataccttcattaaaatttagaaaaattgcttaaatactttttgat 437  Q
    |                   |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35232777 taaaaaaaaaaaaaaaaaaagtgtatttttattgattctaaacaaattgaaatacatatcttcattaaaatttagaaaaattgcttaaatactttttgat 35232678  T
Q  438 taaaatctaaacagcaataagttcgactcaaattcaacatctgctacaaatgatctcaaaactcataaatctttacagtatcatgcacatnnnnnnntgt 537  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||    
T  35232677 taaaatctaaacagcaataagttcgactcaaattcaatatctgctacaaatgatctcaaaactcataaatctttacagtatcatgtacataaaaaaatgt 35232578  T
Q  538 aatcaaatttacagtaacacgaaccacattatagatagatgcaacattctacaaaagcatagcagactgcttttcaaacattgataatttgggttaaatt 637  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  35232577 aatcaaatttacagtaacacgaaccacattatagatagatgcaacattctacaaaagcatagcagactgcttttcaaacattcataatttggggtaaatt 35232478  T
Q  638 atattggtatgaat 651  Q
    ||||||||||||||    
T  35232477 atattggtatgaat 35232464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 35233116 - 35232946
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  35233116 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatgttttgattcactctttaatcttccatagaga 35233017  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||||||||| ||||| | |||||||||||||||| |||||||||||||||||||| ||||    
T  35233016 ttaattgaacatcatgattgtttgattgttggtgggtgaaagagagtgaaattttagagcgacaatgaatg 35232946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 35155159 - 35154989
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  35155159 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatgttttgattcactctttaatcttccatagaga 35155060  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||||||||  ||||| | |||||||||||||||| || ||||||||||||||||| ||||    
T  35155059 ttaattgaacatcatgattatttgatcgttggtgggtgaaagagagtggaattttagagcgacaatgaatg 35154989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 36232033 - 36231868
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  36232033 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 36231934  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    |||||||||||||  ||||| ||||| | |||||||||||||||| ||||||||||||| ||||||    
T  36231933 ttaattgaacatcgggattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaat 36231868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 19942285 - 19942455
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  19942285 aaaccagcgttattgaaaaaaaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 19942384  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  19942385 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaatgaatg 19942455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 44353770 - 44353600
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  44353770 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 44353671  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| |  ||||||||||||||| ||||||||||| | |||||| ||||    
T  44353670 ttaattgaacatcaggattgtttgatcgtaggtgggtgaaagagagtgaaattttagtgtgacaatgaatg 44353600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 49779246 - 49779076
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||    
T  49779246 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgatttactctttaatcttccatagaga 49779147  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| |||| ||||||    
T  49779146 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacattaaatg 49779076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 28411953 - 28412118
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| |||    
T  28411953 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccataaaga 28412052  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| ||||||    
T  28412053 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaat 28412118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 48585331 - 48585501
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| || || ||||||||||||||||||||||| ||||    
T  48585331 aaaccaacgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatggatgaaagatgttttgattcactctttaatcttccattgaga 48585430  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  48585431 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaatgaatg 48585501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 4 - 166
Target Start/End: Complemental strand, 7680603 - 7680442
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||| |||  |||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  7680603 aaaccagcgttattgaaaaagaagaaaaa-ttcgattatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 7680505  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgac 166  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || ||||||||||||||    
T  7680504 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagagcgac 7680442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 16 - 168
Target Start/End: Original strand, 14279569 - 14279721
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| |||||| |||||||||||||    
T  14279569 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatctttcatagaaattaattgaacat 14279668  T
Q  116 catgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaa 168  Q
    |||||||| ||||| | |||||||||||||| | || |||||||||| |||||    
T  14279669 catgattgtttgatcgttggtgggtgaaagatagtggaattttagagtgacaa 14279721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 2612704 - 2612546
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| ||||||    
T  2612704 aaaccagcgttattgaaaaagaagaaaaaaatcacttatttatatgcaatcgagtatgaatgaaaaatgttttgattcactctttaattttccgtagaga 2612605  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    ||||||||| ||||  |||| ||||| | |||||||||||||||| || ||||||||||    
T  2612604 ttaattgaatatcagaattgtttgatcgttggtgggtgaaagagagtggaattttagag 2612546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 52343481 - 52343650
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||| |||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| ||||||||    
T  52343481 aaactagcgttattaaaaaagaagaaaa-attcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatctttcatagaga 52343579  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||||||||| | ||| |||||||||||| || |||||||||| |||||| ||||    
T  52343580 ttaattgaacatcaggattgcttgatcgttggcgggtgaaagagagtggaattttagagtgacaatgaatg 52343650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 30419403 - 30419558
Alignment:
Q  19 aaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcat 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||| ||||||||||||||||||||||||||||||||     
T  30419403 aaaaaaaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactttttaatcttccatagagattaattgaacatcag 30419502  T
Q  119 gattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||| ||||| |  ||||||||||||||| ||||||||||| | |||||| ||||    
T  30419503 gattgtttgatcgtaggtgggtgaaagagagtgaaattttagtgtgacaatgaatg 30419558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 8 - 174
Target Start/End: Complemental strand, 4595925 - 4595760
Alignment:
Q  8 cagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaa 107  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| || || || |||||||||||||||||||||||| |||||||    
T  4595925 cagcgttattgaaaaagaagaaaagattcacttatttatatgcaatcgagtatgaatggaagatgttttgattcactctttaatcttccataaagattaa 4595826  T
Q  108 ttgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||| ||||  || || | |||||| |||||| || ||||||||||||| |||||| ||||    
T  4595825 ttgaacatcaggatttttttatcgttggtggatgaaag-gagtgaaattttagagtgacaatgaatg 4595760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 35 - 169
Target Start/End: Complemental strand, 38144592 - 38144458
Alignment:
Q  35 tcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagctg 134  Q
    |||||||||||||||||||||||||||||||||| || || | |||||||||||||||||||||||||||||||||||||||| ||||| ||||| | ||    
T  38144592 tcacttatttatatgcaatcgagtatgaatgaaagatgttttaattcactctttaatcttccatagagattaattgaacatcaggattgtttgatcgttg 38144493  T
Q  135 gtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    ||| |||||||||| ||||||||||||| ||||||    
T  38144492 gtgtgtgaaagagagtgaaattttagagtgacaat 38144458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 33 - 159
Target Start/End: Original strand, 24200184 - 24200310
Alignment:
Q  33 attcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagc 132  Q
    ||||||||||||||||||||| |||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |     
T  24200184 attcacttatttatatgcaattgagtataaatgaaagatattttgattcactctttaatcttcgatagagattaattgaacatcaagattgtttgatcgt 24200283  T
Q  133 tggtgggtgaaagagaatgaaatttta 159  Q
    |||||||||||||||| || |||||||    
T  24200284 tggtgggtgaaagagagtggaatttta 24200310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 41589435 - 41589556
Alignment:
Q  53 tcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagctggtgggtgaaagagaatga 152  Q
    ||||||||| |||||| || || |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| | | |||||||||||||| ||     
T  41589435 tcgagtatggatgaaagatgttttgattcactctttaatcttccatagagattgattgaacatcaggattgtttgatcgtttgtgggtgaaagagattgg 41589534  T
Q  153 aattttagagcgacaataaatg 174  Q
    |||||||||| |||||| ||||    
T  41589535 aattttagagtgacaatgaatg 41589556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 36840098 - 36840010
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatct 93  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  36840098 aaaccagcgttattgaaaaagaa-aaaaaatccacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatct 36840010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 8947329 - 8947233
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaa 112  Q
    |||||||||||||| ||||||||||| |||||||| |||||||||| |||||| || || |||||||||||||||||||||||||| ||| ||||||    
T  8947329 ttgaaaaagaagaagaaattcacttacttatatgctatcgagtatggatgaaagatgttttgattcactctttaatcttccatagaaattgattgaa 8947233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 52813682 - 52813771
Alignment:
Q  51 aatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagctggtgggt 140  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||||||| ||||| ||||| | ||||||||    
T  52813682 aatcgagtatgaatgaaagatattttgattcactctttaatcttccatatagactaattgaacatcaggattgtttgatcgttggtgggt 52813771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 36835589 - 36835504
Alignment:
Q  88 taatcttccatagagattaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaat 173  Q
    ||||||||||| |||||||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| ||||||||||    
T  36835589 taatcttccattgagattaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaataaat 36835504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 23483149 - 23483248
Alignment:
Q  17 tgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatc 116  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||| | |||| || || |||||||||||||||||||| ||| ||||| ||||| ||||    
T  23483149 tgaaaaagaagaagaaattcaattatttatatgcaatagagtatggacgaaagatgttttgattcactctttaatcttctatatagattgattgaccatc 23483248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 22781339 - 22781271
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| |||||||||||||||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  22781339 agaagaagaaattcacttatttatatccaattgagtatggatgaaaaatattttgattcactctttaat 22781271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 24395756 - 24395824
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||||||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  24395756 agaagaaaaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 24395824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 47097744 - 47097625
Alignment:
Q  25 aagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgc 124  Q
    ||||| ||||||| ||| |||||||||||| |||||| ||||||  | || ||||||| |||||||||||||||| ||||| |||||||||||  ||||     
T  47097744 aagaagaaattcatttacttatatgcaatcaagtatggatgaaaggtgttttgattcattctttaatcttccataaagattgattgaacatcagtattgt 47097645  T
Q  125 ttgatagctggtgggtgaaa 144  Q
    ||||| | | ||||||||||    
T  47097644 ttgatcgtttgtgggtgaaa 47097625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 54556808 - 54556934
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||  |||||||    || ||||||||||| ||| |||||||||    
T  54556808 ttgaaaaagaagaagaaattcatttacttatatgcaatcgagtatggatgaaagatatttggattcac----tattcttccatagaaattgattgaacat 54556903  T
Q  116 catgattgcttgatagctggtgggtgaaagag 147  Q
    ||| |||  ||||| | | |||||||||||||    
T  54556904 cat-attatttgatcgtttgtgggtgaaagag 54556934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 39626356 - 39626275
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttcca 97  Q
    |||||||||||||  ||||||||||  |||||||||||||||||||||||||| || || | ||||||||||||| ||||||    
T  39626356 ttgaaaaagaagacgaaattcacttgcttatatgcaatcgagtatgaatgaaagatgttttaattcactctttaaccttcca 39626275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 85209 - 85277
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  85209 agaagaataaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 85277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 672630 - 672698
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  672630 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 672698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 4515535 - 4515467
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  4515535 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 4515467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 7678899 - 7678831
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  7678899 agaagaataaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 7678831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 10840924 - 10840856
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  10840924 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 10840856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 10999282 - 10999214
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  10999282 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 10999214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 20835041 - 20834973
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  20835041 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 20834973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 31608214 - 31608310
Alignment:
Q  20 aaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatc 116  Q
    |||||||||| ||||||||||| |||||||||||  |||||| |||||| ||  | ||||| | |||||||||||| ||||||||| ||||||||||    
T  31608214 aaaagaagaagaaattcacttacttatatgcaataaagtatggatgaaagatgctttgatttattctttaatcttctatagagattgattgaacatc 31608310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 33712213 - 33712145
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  33712213 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 33712145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 38871682 - 38871750
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  38871682 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 38871750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 53974839 - 53974907
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  53974839 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 53974907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 6267823 - 6267755
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||| ||| |||||||||||| ||||||||||||||||    
T  6267823 agaagaagaaattcacttacttatatccaattgaggatggatgaaaaatattttgattcactctttaat 6267755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 20048865 - 20048933
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||||||||||| ||| |||||| |||| ||||||| |||||||||||| | ||||||||||||||    
T  20048865 agaagaaaaaattcaattacttatatccaattgagtatggatgaaaaatattttcattcactctttaat 20048933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 32236857 - 32236925
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||  ||||||| |||||||||||| ||||||||||||||||    
T  32236857 agaagaagaaattcacttacttatatccaactgagtatggatgaaaaatattttgattcactctttaat 32236925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 33967476 - 33967544
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| ||| |||||||| ||||||||||||||||    
T  33967476 agaagaagaaattcacttacttatatccaattgagtatggatggaaaatattttgattcactctttaat 33967544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 40585654 - 40585586
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| ||||| |||||| ||||||||||||||||    
T  40585654 agaagaagaaattcacttacttatatccaattgagtatggatgaagaatattttgattcactctttaat 40585586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 7149497 - 7149416
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagatt 105  Q
    ||||||| ||||||||||| ||| || |||| ||||| | |||||||||||| |||||||||||||||| |||||| ||||||    
T  7149497 agaagaagaaattcacttacttagatccaattgagtagggatgaaaaatattttgattcactctttaat-ttccatggagatt 7149416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 2612464 - 2612423
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  2612464 tgggtgtaaccagaaatatataggatgtgaatagaaaaactc 2612423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 33393140 - 33393211
Alignment:
Q  49 gcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccat---agagattaattgaacatca 117  Q
    ||||||||||||| ||||||||| || |||||||||||||||||||| ||   ||||||| |||||||||||    
T  33393140 gcaatcgagtatggatgaaaaatgttttgattcactctttaatcttctataacagagattgattgaacatca 33393211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 36430872 - 36430941
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatc-gagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| ||||  ||||||| |||||||||||| ||||||||||||||||    
T  36430872 agaagaagaaattcacttacttatatccaatttgagtatggatgaaaaatattttgattcactctttaat 36430941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 41070440 - 41070509
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatc-gagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| ||||  ||||||| |||||||||||| ||||||||||||||||    
T  41070440 agaagaagaaattcacttacttatatccaatttgagtatggatgaaaaatattttgattcactctttaat 41070509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 4044307 - 4044239
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| ||||||||||||   ||||||||||||||    
T  4044307 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatatttgaattcactctttaat 4044239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 20656784 - 20656716
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||  ||||||| |||||||||||| ||||| ||||||||||    
T  20656784 agaagaagaaattcacttacttatatccaactgagtatggatgaaaaatattttgatttactctttaat 20656716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 26090912 - 26090980
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| | ||||| ||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  26090912 agaagaagatattcatttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 26090980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 24200393 - 24200435
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  24200393 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 24200435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 28412192 - 28412234
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  28412192 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 28412234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 11124566 - 11124607
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  11124566 tgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 11124607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 52343719 - 52343760
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  52343719 tgggtgtaactagaaatatatagggtgtgaatagaaaaactc 52343760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 37971203 - 37971135
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||| |   ||||||||||||||||    
T  37971203 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaaaaaattgattcactctttaat 37971135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 36835438 - 36835396
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||| |||| ||||||||||||| |||||||||||||||||    
T  36835438 ctgggtataaccagaaatatatagggtgtgaatagaaaaactc 36835396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 48585570 - 48585612
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| | ||||||||||| |||||||||||||||||    
T  48585570 ctgggtgtaaccaaaaatatatagggtgtgaatagaaaaactc 48585612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 7680364 - 7680323
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| | ||||||||||| |||||||||||||||||    
T  7680364 tgggtgtaaccaaaaatatatagggtgtgaatagaaaaactc 7680323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 25711512 - 25711553
Alignment:
Q  50 caatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    |||| ||||||| |||||||||||| ||||||||||||||||    
T  25711512 caattgagtatggatgaaaaatattttgattcactctttaat 25711553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 44353529 - 44353488
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| | ||||||||||| |||||||||||||||||    
T  44353529 tgggtgtaaccaaaaatatatagggtgtgaatagaaaaactc 44353488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 52813874 - 52813915
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| | ||||||||||| |||||||||||||||||    
T  52813874 tgggtgtaaccaaaaatatatagggtgtgaatagaaaaactc 52813915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 24989826 - 24989786
Alignment:
Q  76 tgattcactctttaatcttccatagagattaattgaacatc 116  Q
    ||||| |||||||||||||| ||||||||| ||||||||||    
T  24989826 tgattaactctttaatcttctatagagattgattgaacatc 24989786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 35154919 - 35154883
Alignment:
Q  246 ggtgtaacaagaaatatataggatgtgaatagaaaaa 282  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  35154919 ggtgtaaccagaaatatatagggtgtgaatagaaaaa 35154883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 36231792 - 36231752
Alignment:
Q  245 gggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||| | ||||||||||| |||||||||||||||||    
T  36231792 gggtgtaaccaaaaatatatagggtgtgaatagaaaaactc 36231752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 3e-65; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 4006414 - 4006584
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| ||||    
T  4006414 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccattgaga 4006513  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||||||||| ||||| | |||||||||||||||| ||||||||||||| |||||| ||||    
T  4006514 ttaattgaacatcatgattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaattaatg 4006584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 38235083 - 38235253
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  38235083 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtacgaatgaaagatattttgattcactctttaatcttccatagaga 38235182  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || ||||||||||||||||| ||||    
T  38235183 ttaattgaacatcaagattgtttgatcgttggtgggtgaaagagagtggaattttagagcgacaatgaatg 38235253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 4230036 - 4230206
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  4230036 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 4230135  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||||||||||||  |||| ||||| | |||||||||||||||| ||||||||||| | |||||| ||||    
T  4230136 ttaattgaacatcagaattgtttgatcgttggtgggtgaaagagagtgaaattttagtgtgacaatgaatg 4230206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 31793188 - 31793018
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||  ||    
T  31793188 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccataacga 31793089  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| ||||||||||||| |||||| ||||    
T  31793088 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaatgaatg 31793018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 38459477 - 38459319
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||    
T  38459477 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagagattaattgaacat 38459378  T
Q  116 catgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    || ||||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  38459377 caggattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaatgaatg 38459319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 44026239 - 44026409
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| |||||||||||||||||    
T  44026239 aaaccagtgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactccttaatcttccatagaga 44026338  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  44026339 ttaattgaacatcaagattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaatgaatg 44026409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 6241 - 6399
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||||||||||||||||||||| |||    
T  6241 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctgtaatcttccatagagattaattgatcat 6340  T
Q  116 catgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    || ||||| ||||| | |||||||||||||||| ||||||||||||| |||||| ||||    
T  6341 caggattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaatgaatg 6399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 38946445 - 38946615
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  38946445 aaaccaacgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 38946544  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | | |||||||||||| | || |||||||||| |||||| ||||    
T  38946545 ttaattgaacatcaagattgtttgatcgttagtgggtgaaagaaagtggaattttagagtgacaatgaatg 38946615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 11266775 - 11266945
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || || |||||||||||||||||||| |||||||    
T  11266775 aaactagcgttattgaaaaagaagaaaaaattcacttatttatatacaatcgagtatgaatgaaagatgttttgattcactctttaatcttcgatagaga 11266874  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | ||||||||||| |||| || |||||||||| |||||| ||||    
T  11266875 ttaattgaacatcaggattgtttgatcgttggtgggtgaatgagagtggaattttagagtgacaatgaatg 11266945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 44704184 - 44704026
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||| || || |||||| |||||||||||||||||||||    
T  44704184 aaaccagctttattgaaaaagaagaaaaaattcacttatttatatgcaatcgggtatgaatgaaagatgttttgattcgctctttaatcttccatagaga 44704085  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    |||||||||||||| ||||| ||| | | |||||||||||||||| |||||||||||||    
T  44704084 ttaattgaacatcaggattgtttggtcgttggtgggtgaaagagagtgaaattttagag 44704026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 16 - 168
Target Start/End: Complemental strand, 41941502 - 41941350
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| |||||| |||||||||||||    
T  41941502 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatctttcatagaaattaattgaacat 41941403  T
Q  116 catgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaa 168  Q
    |||||||| ||||| | || ||||||||||||| || |||||||||| |||||    
T  41941402 catgattgtttgatcgttgatgggtgaaagagagtggaattttagagtgacaa 41941350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 12723077 - 12723245
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  12723077 aaaccagcgtcattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 12723176  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||||||||||   ||||| ||||| | |||| ||||||||||| || |||||||||| |||||| ||||    
T  12723177 ttaattgaacat--ggattgtttgatcgttggtcggtgaaagagagtggaattttagagtgacaatgaatg 12723245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 35329221 - 35329051
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||| ||| | ||||||||||||| || || |||||||||||||||||||||| |||||    
T  35329221 aaaccagcgttattgaaaaagaaaaaaaaattcacttatttatatacaagctagtatgaatgaaagatgttttgattcactctttaatcttccaaagaga 35329122  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||| | ||||||||||||| |||||| ||||    
T  35329121 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagaaagtgaaattttagagtgacaatgaatg 35329051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 42687332 - 42687162
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| ||| |||||||    
T  42687332 aaaccaacgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatattctatagaga 42687233  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||| ||||||||| | ||||||||| | |||||| ||||    
T  42687232 ttaattgaacatcaggattgtttgattgttggtggatgaaagagagttaaattttagtgtgacaatgaatg 42687162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 25 - 174
Target Start/End: Complemental strand, 38167940 - 38167791
Alignment:
Q  25 aagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgc 124  Q
    ||||||||||||||||||| |||||||||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||| |||||     
T  38167940 aagaaaaaattcacttattcatatgcaatcgagtatgaatgaaagatgttttgattgactctttaatcttccatagagattaattgaacatcaggattgt 38167841  T
Q  125 ttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||| | |||||||||||||||| ||||||||||||| |||||| ||||    
T  38167840 ttgatcgttggtgggtgaaagagagtgaaattttagagtgacaatgaatg 38167791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 28152034 - 28152191
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||||||||| ||||||||    
T  28152034 aaaccagcgttattgaaaaagaa-aaaaaattcacttatttatatgcaatcgagtatgaatgaaatatgttttgaatcactctttaatctttcatagaga 28152132  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    |||||||||||| | ||||| ||||| | |||||||||||||||| || ||||||||||    
T  28152133 ttaattgaacattaggattgtttgattgttggtgggtgaaagagagtggaattttagag 28152191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 33771935 - 33772105
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| || || ||| ||||| ||| ||||||||||||||    
T  33771935 aaaccagcgttattgaaaaagaaaaaaaaattcacttatttatatgcaattgagtatgaatgaaagatgttttgactcactatttgatcttccatagaga 33772034  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||||||||||||  |||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  33772035 ttaattgaacatcaaaattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaatgaatg 33772105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 37 - 159
Target Start/End: Complemental strand, 36057069 - 36056947
Alignment:
Q  37 acttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagctggt 136  Q
    ||||||||||||| |||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | ||||    
T  36057069 acttatttatatgtaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagagattaattgaacatcaggattgtttgatcgttggt 36056970  T
Q  137 gggtgaaagagaatgaaatttta 159  Q
    |||||||||||| ||||||||||    
T  36056969 gggtgaaagagagtgaaatttta 36056947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 42 - 174
Target Start/End: Original strand, 44025389 - 44025520
Alignment:
Q  42 tttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagctggtgggtg 141  Q
    |||||||||||||||||| |||||||| || || ||||||||||||||||||| |||| ||||||||||||||||| || || ||||| | |||||||||    
T  44025389 tttatatgcaatcgagtacgaatgaaatatgttttgattcactctttaatctttcatacagattaattgaacatcagga-tgtttgatcgttggtgggtg 44025487  T
Q  142 aaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||||| ||||||||||||| |||||| ||||    
T  44025488 aaagagagtgaaattttagagtgacaatgaatg 44025520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 49 - 174
Target Start/End: Original strand, 39713277 - 39713402
Alignment:
Q  49 gcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagctggtgggtgaaagaga 148  Q
    ||||||||||||| |||||| || || |||||||||||||||||||||||||  ||| ||||||||||||||||| ||||| | | ||||||||||||||    
T  39713277 gcaatcgagtatggatgaaagatgttttgattcactctttaatcttccataggaattgattgaacatcatgattgtttgatcgtttgtgggtgaaagaga 39713376  T
Q  149 atgaaattttagagcgacaataaatg 174  Q
     ||||||||||||| |||||| ||||    
T  39713377 ttgaaattttagagtgacaattaatg 39713402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 44696221 - 44696379
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    |||||||||||||| ||||||| ||| ||||||||| | ||||||   ||||| || || |||||||||||||||||||||||||||||| |||||||||    
T  44696221 ttgaaaaagaagaagaaattcatttacttatatgcacttgagtatcggtgaaagatgttttgattcactctttaatcttccatagagattgattgaacat 44696320  T
Q  116 catgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||  |||| ||||| | | |||||||||| |   ||||||||||||  |||||| ||||    
T  44696321 cagaattgtttgatcgtttgtgggtgaaaaatggtgaaattttagaatgacaatgaatg 44696379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 7969493 - 7969379
Alignment:
Q  3 aaaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagag 102  Q
    ||||| ||| || |||||| ||||||| |||| ||| |  |||||||||||| |||||| |||||| |  || |||||||||||||||||||||||||||    
T  7969493 aaaactagcattattgaaatagaagaagaaatacacctgcttatatgcaatcaagtatggatgaaagaagttttgattcactctttaatcttccatagag 7969394  T
Q  103 attaattgaacatca 117  Q
    ||| |||||||||||    
T  7969393 attgattgaacatca 7969379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 17602204 - 17602272
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  17602204 agaagaagaaattcacttacttatatccaattgagtatgaatgaaaaatattttgattcactctttaat 17602272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 37578781 - 37578849
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||||||||||| |||||||||||| ||||||||||||||||    
T  37578781 agaagaagaaattcacttacttatattcaatcgagtatggatgaaaaatattttgattcactctttaat 37578849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 49 - 159
Target Start/End: Complemental strand, 5346985 - 5346872
Alignment:
Q  49 gcaatcgagtatgaatgaaaaatattctgattcactctttaatcttcc---atagagattaattgaacatcatgattgcttgatagctggtgggtgaaag 145  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||   ||||||||| ||||||||||| | ||| ||||| | |   |||||||||    
T  5346985 gcaatcgagtatggatgaaaaatattttgattcactctttaatcttccataatagagattgattgaacatcaggtttgattgatcgtttcagggtgaaag 5346886  T
Q  146 agaatgaaatttta 159  Q
    ||| || |||||||    
T  5346885 agagtggaatttta 5346872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 7988212 - 7988123
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagatt 105  Q
    |||||||||||||| |||| |||||  |||||||||||  |||||| |||||| |  || ||||||||||||||||||||||||||||||    
T  7988212 ttgaaaaagaagaagaaatacacttgcttatatgcaataaagtatggatgaaagaagttttgattcactctttaatcttccatagagatt 7988123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 1848502 - 1848402
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    |||||||||||||| ||| ||| ||| |||||||||||| |||||| |||||| || || |||| ||||||||||||||| ||| | ||| |||||||||    
T  1848502 ttgaaaaagaagaagaaactcatttacttatatgcaatcaagtatggatgaaatatgttttgatccactctttaatcttctataaatattgattgaacat 1848403  T
Q  116 c 116  Q
    |    
T  1848402 c 1848402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 3032460 - 3032392
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  3032460 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 3032392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 5599409 - 5599341
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| |||||||||||||||||| |||| ||||||| |||||||||||| ||||||||| ||||||    
T  5599409 agaagaagaaattcacttatttatatccaattgagtatggatgaaaaatattttgattcactatttaat 5599341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 8376777 - 8376845
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  8376777 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 8376845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 15840351 - 15840419
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  15840351 agaagaagaaattcacttacttatattcaattgagtatggatgaaaaatattttgattcactctttaat 15840419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 24822250 - 24822182
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  24822250 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 24822182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 26122127 - 26122059
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| |||||||||||||||||||| ||||||||| ||||||    
T  26122127 agaagaagaaattcacttacttatatccaattgagtatgaatgaaaaatattttgattcactttttaat 26122059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 26290295 - 26290227
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| |||||||||||||||||||| ||||| ||||||||||    
T  26290295 agaagaagaaattcacttacttatatccaattgagtatgaatgaaaaatattttgatttactctttaat 26290227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 26303552 - 26303484
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| |||||||||||||||||||| ||||| ||||||||||    
T  26303552 agaagaagaaattcacttacttatatccaattgagtatgaatgaaaaatattttgatttactctttaat 26303484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 26315546 - 26315478
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| |||||||||||||||||||| ||||| ||||||||||    
T  26315546 agaagaagaaattcacttacttatatccaattgagtatgaatgaaaaatattttgatttactctttaat 26315478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 28884924 - 28884856
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  28884924 agaagaataaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 28884856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 28910532 - 28910600
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  28910532 agaagaataaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 28910600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 34564580 - 34564512
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  34564580 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 34564512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 35605897 - 35605965
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  35605897 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 35605965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 39365840 - 39365908
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  39365840 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 39365908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 42512741 - 42512809
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  42512741 agaagaagaaattcacttacttatatccaattgagtatgtatgaaaaatattttgattcactctttaat 42512809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 43663865 - 43663799
Alignment:
Q  25 aagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  43663865 aagaagaaattcacttacttatatccaattgagtatgtatgaaaaatattttgattcactctttaat 43663799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 3136760 - 3136692
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||| ||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  3136760 agaagaagaaattcaattacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 3136692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 5988707 - 5988775
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||| ||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  5988707 agaagaagaaattcaattacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 5988775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 26992003 - 26991927
Alignment:
Q  35 tcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattga 111  Q
    ||||||| ||||||||||| ||||||||| |||| || || |||||||||||| ||||||| ||||||||| |||||    
T  26992003 tcacttacttatatgcaattgagtatgaacgaaagatgttttgattcactcttcaatcttctatagagattgattga 26991927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 35979530 - 35979430
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    ||||| || ||||| ||||||||||| ||||||||||   |||||| |||||| ||||| ||||||| |||||||||||   |||||||| |||||||||    
T  35979530 ttgaacaaaaagaagaaattcacttacttatatgcaacatagtatggatgaaagatattttgattcagtctttaatcttttttagagattgattgaacat 35979431  T
Q  116 c 116  Q
    |    
T  35979430 c 35979430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 44953653 - 44953744
Alignment:
Q  25 aagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatc 116  Q
    ||||| ||||||||||| |||||| |||| |||||||| |||||| |  | ||||| |||||||||||||  ||||||||| ||||||||||    
T  44953653 aagaagaaattcacttacttatatccaatagagtatgagtgaaaagtgatttgatttactctttaatcttttatagagattgattgaacatc 44953744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 40184592 - 40184662
Alignment:
Q  24 gaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatctt 94  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||||  | || ||||||||||||| |||||    
T  40184592 gaagaagaaattcacttacttatatgcaatcgagtatggatgaaagttgttttgattcactctttcatctt 40184662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 23356774 - 23356715
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattca 82  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| |||||||    
T  23356774 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattca 23356715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 33772174 - 33772216
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  33772174 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 33772216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 36056864 - 36056822
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  36056864 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 36056822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 38167722 - 38167680
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| || |||||||||||||||||||||||||||||    
T  38167722 ctgggtgtaataaaaaatatataggatgtgaatagaaaaactc 38167680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 4006654 - 4006695
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  4006654 tgggtgtaactagaaatatatagggtgtgaatagaaaaactc 4006695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 28152271 - 28152312
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  28152271 tgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 28152312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 32911010 - 32911067
Alignment:
Q  25 aagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattca 82  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||| || || |||||||    
T  32911010 aagaagaaattcacttacttatatgcaatagagtatgaatgaaagatgttttgattca 32911067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 41941274 - 41941233
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  41941274 tgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 41941233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 285
Target Start/End: Original strand, 4230277 - 4230317
Alignment:
Q  245 gggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  4230277 gggtgtaaccagaaatatatagggtgtgaatagaaaaactc 4230317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 31792948 - 31792912
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaa 280  Q
    |||||||||| ||||||||||||||||||||||||||    
T  31792948 tgggtgtaaccagaaatatataggatgtgaatagaaa 31792912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 38459250 - 38459208
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| | ||||||||||| |||||||||||||||||    
T  38459250 ctgggtgtaaccaaaaatatatagggtgtgaatagaaaaactc 38459208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 42687092 - 42687051
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| | ||||||||||| |||||||||||||||||    
T  42687092 tgggtgtaaccataaatatatagggtgtgaatagaaaaactc 42687051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 44025589 - 44025625
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaa 279  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  44025589 ctgggtgtaactagaaatatatagggtgtgaatagaa 44025625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 3e-65; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 1523504 - 1523674
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  1523504 aaaccagcgttattaaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 1523603  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||||||||| ||||| | |||||||||||||||| ||||||||||||| |||||| ||||    
T  1523604 ttaattgaacatcatgattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaatgaatg 1523674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 36852376 - 36852541
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  36852376 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 36852475  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| ||||||||||||| ||||||    
T  36852476 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaat 36852541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 13961829 - 13961659
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  13961829 aaaccagcgttattgaaaaagaagaaaaaattcatttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 13961730  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| |||||||||||    
T  13961729 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaataaatg 13961659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 35339086 - 35338916
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| || || ||||||||||||||||||||||||||||    
T  35339086 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgggtatgaatgaaacatgttttgattcactctttaatcttccatagaga 35338987  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  35338986 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaatgaatg 35338916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 22847656 - 22847826
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  22847656 aaaccagcgttattgaaaaagaagaataaattcacttatttatatgcaatcgagtatgaatgaaatatattttgattcactctttaatcttctatagaga 22847755  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||| ||||||||||| ||||||||||| | |||||| ||||    
T  22847756 ttaattgaacatcaggattgtttgatcgttggttggtgaaagagagtgaaattttagtgtgacaatgaatg 22847826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 32933331 - 32933489
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  32933331 aaaccagcgttattgaaaaagaagaaaaaattcacatatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 32933430  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || ||||||||||    
T  32933431 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagag 32933489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 37829576 - 37829734
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||    
T  37829576 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaattgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 37829675  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    ||||||||||||| | |||| ||||| | |||||||||||||||| |||||||||||||    
T  37829676 ttaattgaacatctttattgtttgattgttggtgggtgaaagagagtgaaattttagag 37829734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 41201803 - 41201633
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||| ||||||||||||||||||    
T  41201803 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactttttaatcttccatagaga 41201704  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||||||||||||  |||| ||||| | |||||||||||||||| ||||||||||| | |||||| ||||    
T  41201703 ttaattgaacatcagaattgtttgatcgttggtgggtgaaagagagtgaaattttagtgtgacaatgaatg 41201633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 43457750 - 43457580
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  43457750 aaaccagcgctattggaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 43457651  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | || ||||||||||||| ||||||||||||| |||||| ||||    
T  43457650 ttaattgaacatcaggattgtttgatcgttgatgggtgaaagagagtgaaattttagagtgacaatgaatg 43457580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 8 - 174
Target Start/End: Original strand, 51323200 - 51323366
Alignment:
Q  8 cagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaa 107  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  51323200 cagcgttattgaaaaagaagaaaaaaatcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagagattaa 51323299  T
Q  108 ttgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||| ||||| ||||| | |||||| |||||||||||| |||||||||| |||||| ||||    
T  51323300 ttgaacatcaggattgtttgatcgttggtggatgaaagagaatggaattttagagtgacaatgaatg 51323366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 3025749 - 3025591
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| ||||||||||||||||||||    
T  3025749 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatctttcatagagattaattgaacat 3025650  T
Q  116 catgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
     | ||||| ||||| | |||||||||||||||| ||||||||||||| |||||| ||||    
T  3025649 taggattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaatgaatg 3025591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 7318839 - 7319009
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||| |||| ||||||||||||||||||    
T  7318839 aaaccaacgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgatccactttttaatcttccatagaga 7318938  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||| ||||||| ||||| ||||| | |||||||||||||||| ||||||||||||| |||||| ||||    
T  7318939 ttaattaaacatcaggattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaatgaatg 7319009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 3027151 - 3027323
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcac--tctttaatcttccataga 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| || || ||||||||  ||||||||||||||||||    
T  3027151 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcaagtatgaatgaaagatgttttgattcacactctttaatcttccataga 3027250  T
Q  102 gattaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  3027251 gattaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaatgaatg 3027323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 48794 - 48639
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  48794 aaaccagcgttattgaaaatgaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatattttgattcactctttaatcttccatagaga 48695  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaatttta 159  Q
     ||||||||||||| ||||| ||||| | ||||||||| |||||| | ||||||||    
T  48694 ataattgaacatcaggattgtttgatcgttggtgggtgcaagagagtaaaatttta 48639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 11691535 - 11691693
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || | |||||||||||||||||| |||||||    
T  11691535 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaatatgtttttattcactctttaatcttctatagaga 11691634  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    |||||||||||||| ||||| ||||| | || ||||||||||||| || ||||||||||    
T  11691635 ttaattgaacatcaggattgtttgatcgttgatgggtgaaagagagtggaattttagag 11691693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 30215252 - 30215082
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| |||    
T  30215252 aaaccaacgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatacaga 30215153  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
     ||||||||||||| ||||| ||||| | |||||||||||||| | |||||||||| || |||||| ||||    
T  30215152 gtaattgaacatcaggattgtttgatcgttggtgggtgaaagatagtgaaattttaaagtgacaatgaatg 30215082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 34160036 - 34160206
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||| || || ||||||||||||||||||||||||||||    
T  34160036 aaaccagcattattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtacgaatgaaagatgttttgattcactctttaatcttccatagaga 34160135  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||| ||||||||| ||||| ||||| | || ||||||||||||| || |||||||||| |||||| ||||    
T  34160136 ttaactgaacatcaagattgtttgatcgttgatgggtgaaagagagtggaattttagagtgacaatgaatg 34160206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 10480774 - 10480608
Alignment:
Q  1 ttaaaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatag 100  Q
    ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||    
T  10480774 ttaaaaccagcattattgaaaaagaagaaaaa-ttcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatag 10480676  T
Q  101 agattaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaa 168  Q
    ||||||||||||||||| ||||  ||||| | ||||||||| |||||| || |||||||||| |||||    
T  10480675 agattaattgaacatcaggattttttgatcgttggtgggtgcaagagagtggaattttagagtgacaa 10480608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 8 - 159
Target Start/End: Complemental strand, 20292766 - 20292615
Alignment:
Q  8 cagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaa 107  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  20292766 cagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagagattaa 20292667  T
Q  108 ttgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaatttta 159  Q
    ||||| |||| ||||| |||||   ||||||||||||||| ||| |||||||    
T  20292666 ttgaatatcaggattgtttgatccttggtgggtgaaagaggatggaatttta 20292615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 47466904 - 47466734
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||||||| |||    
T  47466904 aaaccaacgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgatttactctttaatcttccataaaga 47466805  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||||||| |||| ||||| ||||| | |||||||||||||| | |  |||||||||| |||||||||||    
T  47466804 ttaattgaatatcaggattgtttgatcgttggtgggtgaaagatagtagaattttagagtgacaataaatg 47466734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 48991088 - 48991258
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |  || ||||||||||||||||||| ||||||||    
T  48991088 aaaccaacgttattgaaaaagaagaaaaaattcacttatttatatgcaattgagtatgaatgaaagacgttttgattcactctttaatcttacatagaga 48991187  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||| | || |||||||||| |||||| ||||    
T  48991188 ttaattgaacatcaagattgtttgatcgttggtgggtgaaagaaagtggaattttagagtgacaatgaatg 48991258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 50469706 - 50469875
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  50469706 aaaccaacgttattgaaaaagaagaaaaaattcacttatttatatgtaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 50469805  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | | |||||||||||||| | ||||||||| | |||||| ||||    
T  50469806 ttaattgaacatcaggattgtttgattg-ttgtgggtgaaagagagttaaattttagtgtgacaatgaatg 50469875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 40430949 - 40431108
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||    
T  40430949 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttctatagaga 40431048  T
Q  104 ttaattg-aacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    ||||||| ||||||| ||||| ||||| | || |||| |||||||| || ||||||||||    
T  40431049 ttaattgcaacatcaggattgtttgatcgttgatgggggaaagagagtggaattttagag 40431108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 4 - 166
Target Start/End: Original strand, 24035171 - 24035333
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||| || || || |||||||| ||||||| ||||||||    
T  24035171 aaaccagcgttattgaaaaagaagaaaaaattcgattatttatatgcaatcgagtatgaatgaaagatgttttggttcactctctaatctttcatagaga 24035270  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgac 166  Q
    ||||||||||||||  |||| ||||| | |||||||||||||||| || ||||||||||||||    
T  24035271 ttaattgaacatcagaattgtttgatcgttggtgggtgaaagagagtggaattttagagcgac 24035333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 47429184 - 47429014
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||||||||||||||||||||||||||||    
T  47429184 aaaccagtgttattgaaaaagaaaaaaaaattcacttatttttatgcaatcgaatatgaatgaaagatgttttgattcactctttaatcttccatagaga 47429085  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||| ||| | | ||||| || || | |||||||||||||||| ||||||||||||| |||||| ||||    
T  47429084 ttaattaaacgttaggattgtttaatcgttggtgggtgaaagagagtgaaattttagagtgacaatgaatg 47429014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 43621102 - 43620943
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaa--ttcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccataga 101  Q
    |||| |||||| ||||||||||||||||||  ||||||||||||||||||||||| ||||| ||||| || || ||||||||||||||||||||||||||    
T  43621102 aaactagcgttattgaaaaagaagaaaaaaaattcacttatttatatgcaatcgaatatga-tgaaagatgttttgattcactctttaatcttccataga 43621004  T
Q  102 gattaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    |||||||||||||||| ||||| ||||| | |||||||||||||||| || ||||||||||    
T  43621003 gattaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagag 43620943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 15659155 - 15659296
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttcc-atagag 102  Q
    |||| |||||| ||||||| |||||||||||||||||||||||| ||||| |||| ||||||||| || || ||||| ||| ||||||||||| ||||||    
T  15659155 aaactagcgttattgaaaaggaagaaaaaattcacttatttataagcaattgagtgtgaatgaaagatgttttgatttactttttaatcttccaatagag 15659254  T
Q  103 attaattgaacatcatgattgcttgatagctggtgggtgaaa 144  Q
    ||||||||||||||  ||||| ||||| | |||||| |||||    
T  15659255 attaattgaacatcgggattgtttgatcgttggtggttgaaa 15659296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 8713850 - 8713971
Alignment:
Q  53 tcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagctggtgggtgaaagagaatga 152  Q
    ||||||||| |||||| || || ||||||||||||||||||| |||| ||||| |||||| |||||||||| ||||| | | |||||||||||| ||||     
T  8713850 tcgagtatggatgaaagatgttttgattcactctttaatcttacataaagattgattgaatatcatgattgtttgatcgtttgtgggtgaaagataatgg 8713949  T
Q  153 aattttagagcgacaataaatg 174  Q
    |||||||||| |||||| ||||    
T  8713950 aattttagagtgacaatgaatg 8713971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 37682704 - 37682583
Alignment:
Q  53 tcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagctggtgggtgaaagagaatga 152  Q
    |||| |||| |||||| || || | |||||||||||||||||||||||||||| |||||||||||  |||| ||||| | | |||||||||||||| |||    
T  37682704 tcgaatatggatgaaagatgttttaattcactctttaatcttccatagagattgattgaacatcagaattgtttgatcgtttgtgggtgaaagagattga 37682605  T
Q  153 aattttagagcgacaataaatg 174  Q
    ||||||||||  ||||||||||    
T  37682604 aattttagagtaacaataaatg 37682583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 15506403 - 15506492
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagatt 105  Q
    |||||||||||||| ||||||| ||| ||||||||||| |||||||||||||| || || |||||||||||||||||||| ||| |||||    
T  15506403 ttgaaaaagaagaagaaattcaattacttatatgcaatagagtatgaatgaaagatgttttgattcactctttaatcttctataaagatt 15506492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 49 - 174
Target Start/End: Original strand, 24897536 - 24897664
Alignment:
Q  49 gcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccat---agagattaattgaacatcatgattgcttgatagctggtgggtgaaag 145  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||   ||||||| ||||||||||| | ||| ||||| | |   |||||||||    
T  24897536 gcaatcgagtatggatgaaaaatattttgattcactctttaatcttccataacagagattgattgaacatcaggtttgattgatcgttttagggtgaaag 24897635  T
Q  146 agaatgaaattttagagcgacaataaatg 174  Q
    | | || ||||||| || |||||| ||||    
T  24897636 atagtggaattttatagtgacaatgaatg 24897664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 53874575 - 53874494
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagatt 105  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| |||||||||||||||| || ||||||||||    
T  53874575 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat-tttcatagagatt 53874494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 20434669 - 20434737
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  20434669 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 20434737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 20738304 - 20738372
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  20738304 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 20738372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 23894726 - 23894658
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  23894726 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 23894658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 25858219 - 25858287
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  25858219 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 25858287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 31710402 - 31710470
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  31710402 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 31710470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 39539998 - 39539930
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  39539998 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 39539930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 42349257 - 42349325
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  42349257 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 42349325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 46564014 - 46563946
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  46564014 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 46563946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 52912691 - 52912623
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  52912691 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 52912623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 55183058 - 55182990
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  55183058 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 55182990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 56017979 - 56017911
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  56017979 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 56017911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 37233704 - 37233623
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagatt 105  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||| ||| |||||||||||||||| || ||||||||||    
T  37233704 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaaaattttgattcactctttaat-tttcatagagatt 37233623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 1536800 - 1536887
Alignment:
Q  28 aaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatc 116  Q
    |||||| ||||||| ||||||||||| ||||||| |||||| || || | |||||||||||||||||| || |||||| ||||||||||    
T  1536800 aaaaaaatcacttacttatatgcaatagagtatggatgaaagatgttttaattcactctttaatcttctat-gagattgattgaacatc 1536887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 10541647 - 10541579
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||| ||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  10541647 agaagaagaaattcaattacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 10541579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 32136114 - 32136227
Alignment:
Q  53 tcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagctggtgggtgaaagagaatga 152  Q
    |||||||||||||||| || || ||||||||||||||||        |||||| ||||||||||| ||||| ||||| | | |||||||||||||| ||     
T  32136114 tcgagtatgaatgaaagatgttttgattcactctttaat--------gagattgattgaacatcaggattgtttgatcgtttgtgggtgaaagagattgg 32136205  T
Q  153 aattttagagcgacaataaatg 174  Q
    |||||||||| |||||| ||||    
T  32136206 aattttagagtgacaatgaatg 32136227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 42723672 - 42723604
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||| | |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  42723672 agaagaagaaattcactcacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 42723604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 55215134 - 55215070
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctt 87  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||    
T  55215134 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctt 55215070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 55220424 - 55220488
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctt 87  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||    
T  55220424 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctt 55220488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 11691775 - 11691816
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  11691775 tgggtgtaaccagaaatatataggatgtgaatagaaaaactc 11691816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 48348859 - 48348802
Alignment:
Q  37 acttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatctt 94  Q
    |||||||||||||||||||||||||||||||| ||||| | ||| ||| |||||||||    
T  48348859 acttatttatatgcaatcgagtatgaatgaaagatattttaatttactatttaatctt 48348802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 52839253 - 52839185
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||  |||||||||||| ||||||||| ||||||    
T  52839253 agaagaagaaattcacttacttatatccaattgagtatagatgaaaaatattttgattcactatttaat 52839185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 56363260 - 56363328
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| ||||||  |||  |||||| |||||||||||| ||||||||||||||||    
T  56363260 agaagaagaaattcacttacttatatctaatttagtatggatgaaaaatattttgattcactctttaat 56363328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 34160275 - 34160317
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  34160275 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 34160317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 43457511 - 43457469
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  43457511 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 43457469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 10480532 - 10480491
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  10480532 tgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 10480491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 38291424 - 38291355
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaata-ttctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||| | || ||||||||||||||||    
T  38291424 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaaaatttttgattcactctttaat 38291355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 47466663 - 47466622
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  47466663 tgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 47466622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 7818284 - 7818392
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaaca- 114  Q
    |||||||||||| | ||||||| ||| ||||||||| | ||||||  |||||| || ||  ||||||||||||||||||  ||||| ||| | ||||||     
T  7818284 ttgaaaaagaaggagaaattcaattacttatatgcattagagtatagatgaaagatgtttcgattcactctttaatcttttatagaaattgactgaacat 7818383  T
Q  115 tcatgattg 123  Q
    |||||||||    
T  7818384 tcatgattg 7818392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 43620862 - 43620822
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaac 283  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  43620862 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaac 43620822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 3027392 - 3027431
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaa 282  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  3027392 ctgggtgtaactagaaatatatagggtgtgaatagaaaaa 3027431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 285
Target Start/End: Complemental strand, 41201560 - 41201521
Alignment:
Q  246 ggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  41201560 ggtgtaaccagaaatatatagggtgtgaatagaaaaactc 41201521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 3025522 - 3025480
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||| |||| ||||||||||||||| |||||||||||||||    
T  3025522 ctgggtataaccagaaatatataggatctgaatagaaaaactc 3025480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 7319079 - 7319121
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| |||| |||||||| |||||||||||||||||    
T  7319079 ctgggtgtaaccagaagtatatagggtgtgaatagaaaaactc 7319121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 37829818 - 37829856
Alignment:
Q  247 gtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  37829818 gtgtaaccagaaatatatagggtgtgaatagaaaaactc 37829856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 47428936 - 47428894
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| | ||||||||| |||||||||||||||||||    
T  47428936 ctgggtgtaactaaaaatatataagatgtgaatagaaaaactc 47428894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 48991319 - 48991361
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||| | ||||||||||||| |||||||||||||||||    
T  48991319 ctgggtgtatccagaaatatatagggtgtgaatagaaaaactc 48991361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 8714041 - 8714082
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| |||||||||| || |||||||||||||||||    
T  8714041 tgggtgtaaccagaaatatatggggtgtgaatagaaaaactc 8714082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 13961590 - 13961549
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| |||||||| |||| |||||||||||||||||    
T  13961590 tgggtgtaaccagaaatatttagggtgtgaatagaaaaactc 13961549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 20292526 - 20292489
Alignment:
Q  248 tgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  20292526 tgtaaccagaaatatatagggtgtgaatagaaaaactc 20292489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 28405978 - 28405909
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatg-aaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| ||| ||||| | | ||||||||||||||||    
T  28405978 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaaaaaatttgattcactctttaat 28405909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 40431194 - 40431231
Alignment:
Q  248 tgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  40431194 tgtaaccagaaatatatagggtgtgaatagaaaaactc 40431231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 50469945 - 50469986
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| | ||||||||||| |||||||||||||||||    
T  50469945 tgggtgtaaccataaatatatagggtgtgaatagaaaaactc 50469986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 614416 - 614452
Alignment:
Q  55 gagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  614416 gagtatggatgaaaaatattttgattcactctttaat 614452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 50562032 - 50562068
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcactt 40  Q
    ||||||||||| | |||||||||||||||||||||||    
T  50562032 aaaccagcgttatcgaaaaagaagaaaaaattcactt 50562068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 1e-64; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 4621866 - 4622031
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  4621866 aaaccatcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 4621965  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||||||    
T  4621966 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagaatgaaattttagagtgacaat 4622031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 6245933 - 6246098
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| || || ||||||||||||||||||||||||||||    
T  6245933 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgggtatgaatgaaagatgttttgattcactctttaatcttccatagaga 6246032  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||||||    
T  6246033 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagaatgaaattttagagtgacaat 6246098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 18865249 - 18865414
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  18865249 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 18865348  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| ||||||||||||| ||||||    
T  18865349 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaat 18865414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 40739842 - 40740007
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  40739842 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 40739941  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| ||||||||||||| ||||||    
T  40739942 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaat 40740007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 7339493 - 7339663
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| ||||||    
T  7339493 aaaccagcattattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccttagaga 7339592  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||||||||| ||||| | |||||||||||||||| ||||||||||||| |||||| ||||    
T  7339593 ttaattgaacatcatgattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaatgaatg 7339663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 15272109 - 15271939
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  15272109 aaaccagcattattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatgttttgattcactctttaatcttccatagaga 15272010  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  15272009 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaatgaatg 15271939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 10552868 - 10553038
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||| |||||||||||||||||||||||    
T  10552868 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgatccactctttaatcttccatagaga 10552967  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | ||||||||||| |||| ||||||||||||| |||||| ||||    
T  10552968 ttaattgaacatcacgattgtttgatcgttggtgggtgaatgagagtgaaattttagagtgacaatgaatg 10553038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 37106697 - 37106868
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaa-aattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagag 102  Q
    |||||||| || |||||||||||||||| |||||||||||||||||||||| |||||||||||||| || || |||||||||||||||||||||||||||    
T  37106697 aaaccagcattattgaaaaagaagaaaaaaattcacttatttatatgcaattgagtatgaatgaaagatgttttgattcactctttaatcttccatagag 37106796  T
Q  103 attaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||||||||||||| ||||| ||||| | |||||||||||||||| ||||||||||||| |||||||||||    
T  37106797 attaattgaacatcaagattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaataaatg 37106868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 8233252 - 8233422
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| || || ||||||||||||||||||||||||||||    
T  8233252 aaaccaacgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtacgaatgaaagatgttttgattcactctttaatcttccatagaga 8233351  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||||||||| ||||| | ||||||||| || ||| ||||||||||||| |||||| ||||    
T  8233352 ttaattgaacatcatgattgtttgatcgttggtgggtgtaaaagagtgaaattttagagtgacaatgaatg 8233422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 10665567 - 10665397
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  10665567 aaaccagcgctattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 10665468  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | || ||||||||||||| | ||||||||||| |||||| ||||    
T  10665467 ttaattgaacatcaggattgtttgatcgttgatgggtgaaagagagtaaaattttagagtgacaatgaatg 10665397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 41881284 - 41881114
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||  ||    
T  41881284 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccataacga 41881185  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  41881184 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaatgaatg 41881114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 42436724 - 42436566
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||    
T  42436724 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagagattaattgaacat 42436625  T
Q  116 catgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||| ||||| | || ||||||||||||| ||||||||||| | |||||| ||||    
T  42436624 catgattgtttgatcgttgatgggtgaaagagagtgaaattttagtgtgacaatgaatg 42436566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 43547996 - 43547826
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||| | |||    
T  43547996 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatattttgattcgctctttaatcttccacataga 43547897  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||||||||| ||||| | |||| ||||||||||| ||||||||||| | |||||| ||||    
T  43547896 ttaattgaacatcatgattgtttgatcgttggttggtgaaagagagtgaaattttagtgtgacaatgaatg 43547826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 18979147 - 18979312
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  18979147 aaaccagcattattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 18979246  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    ||||||||||||||  |||| ||||| | |||||||||||||||| |||| |||||| | ||||||    
T  18979247 ttaattgaacatcagaattgtttgatcgttggtgggtgaaagagagtgaagttttagtgtgacaat 18979312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 24478102 - 24478272
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||| || || ||||||||| ||||||||||||||||||    
T  24478102 aaaccaacgttattgaaaaggaagaaaaaatttacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactatttaatcttccatagaga 24478201  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||| ||||||||||| ||||||||||||| |||||| ||||    
T  24478202 ttaattgaacatcaggattgtttgatcgttggttggtgaaagagagtgaaattttagagtgacaatgaatg 24478272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 10 - 174
Target Start/End: Complemental strand, 37274197 - 37274033
Alignment:
Q  10 gcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaatt 109  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||||    
T  37274197 gcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaaattaatt 37274098  T
Q  110 gaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
     ||||||| ||||| |||||   |||||||||||||||| || |||||||||| |||||| ||||    
T  37274097 aaacatcaggattgtttgatcattggtgggtgaaagagagtggaattttagagtgacaatgaatg 37274033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 38768972 - 38769127
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || |||||||| |||||||||||||||||||    
T  38768972 aaaccaacgttattgaaaaagaataaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcacgctttaatcttccatagaga 38769071  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaatttta 159  Q
    |||||||||||||| ||||| ||||| | |||||||| ||||||| ||||||||||    
T  38769072 ttaattgaacatcaggattgtttgatcgttggtgggtaaaagagagtgaaatttta 38769127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 13210452 - 13210281
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaa-ttcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagag 102  Q
    ||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||| | || || |||||||||||||||||||||||||||    
T  13210452 aaaccagcgttattgaaaaagaaaaaaaaaattcacttatttatatgcaatcgagtatgaatgagagatgttttgattcactctttaatcttccatagag 13210353  T
Q  103 attaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||||||||||| |  |||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  13210352 attaattgaacattagaattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaatgaatg 13210281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 8048238 - 8048068
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  8048238 aaaccagtgttattaaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 8048139  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||| |||||||  |||| ||||| | |||||| ||||||||| || | |||||||| |||||| ||||    
T  8048138 ttaattaaacatcagaattgtttgatcgttggtggatgaaagagagtggatttttagagtgacaatgaatg 8048068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 18522697 - 18522854
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||| || || |||||||||||||||||||||||| |||||||||||||||    
T  18522697 ttgaaaaagaagaaaa-attcacttatttatatgcaatcaagtatgaatgaaagatgttttgattcactctttaatcttccatatagattaattgaacat 18522795  T
Q  116 catgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    || ||||| ||||| | |||||||||||||| | || |||||||||| |||||| ||||    
T  18522796 caggattgtttgatcgttggtgggtgaaagatagtggaattttagagtgacaatgaatg 18522854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 31499510 - 31499657
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||   |||||||||||||| || || | ||||||||||||||||| ||||||||    
T  31499510 aaaccagcgttattgaaaaagaataaaaaattcacttatttatatgca---gagtatgaatgaaagatgttttaattcactctttaatctttcatagaga 31499606  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaa 154  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| |||||    
T  31499607 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtgaaa 31499657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 37 - 159
Target Start/End: Original strand, 37341548 - 37341670
Alignment:
Q  37 acttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagctggt 136  Q
    ||||||||||||| |||||||||||||||||| || || ||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| | ||||    
T  37341548 acttatttatatgtaatcgagtatgaatgaaagatgttttgattcactctttaatctttcatagagattaattgaacatcaggattgtttgatcgttggt 37341647  T
Q  137 gggtgaaagagaatgaaatttta 159  Q
    |||||||||||| ||||||||||    
T  37341648 gggtgaaagagagtgaaatttta 37341670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 31485344 - 31485439
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccata 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||    
T  31485344 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccata 31485439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 48 - 174
Target Start/End: Original strand, 27309643 - 27309772
Alignment:
Q  48 tgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccat---agagattaattgaacatcatgattgcttgatagctggtgggtgaaa 144  Q
    |||||| ||||||| |||||||||||| |||||||||||||||||||||||   ||||||| ||||||||||| | ||| ||||| | |  |||||||||    
T  27309643 tgcaattgagtatggatgaaaaatattttgattcactctttaatcttccataacagagattgattgaacatcaggtttgtttgattgtttctgggtgaaa 27309742  T
Q  145 gagaatgaaattttagagcgacaataaatg 174  Q
    |||| || |||||||||| |||||| ||||    
T  27309743 gagagtggaattttagagtgacaatgaatg 27309772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 13145418 - 13145350
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  13145418 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 13145350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 19034249 - 19034181
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  19034249 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 19034181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 19617131 - 19617063
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  19617131 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 19617063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 24559651 - 24559719
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  24559651 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 24559719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 24600684 - 24600752
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  24600684 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 24600752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 25085559 - 25085627
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  25085559 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 25085627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 25143531 - 25143599
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  25143531 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 25143599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 29920999 - 29921067
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||||||||||||||| |||||| |||| ||||||| |||||||||||  ||||||||||||||||    
T  29920999 agaagaaaaaattcacttacttatatccaattgagtatggatgaaaaatatgttgattcactctttaat 29921067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 31510971 - 31510903
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  31510971 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 31510903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 33281409 - 33281477
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  33281409 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 33281477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 37866432 - 37866500
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  37866432 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 37866500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 43517821 - 43517753
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||||||||||| ||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  43517821 agaagaaaaaattcaattacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 43517753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 4155672 - 4155608
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctt 87  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||    
T  4155672 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctt 4155608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 9066240 - 9066308
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||  |||||||||||| ||||||||||||||||    
T  9066240 agaagaagaaattcacttacttatatccaattgagtatagatgaaaaatattttgattcactctttaat 9066308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 29385782 - 29385679
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttat--ttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaac 113  Q
    ||||||||||| || |||||||||| |  |||||||||||| ||||| ||||||| || || | ||||||| |||||||||||||| ||||  |||||||    
T  29385782 ttgaaaaagaataagaaattcacttttaattatatgcaatcaagtattaatgaaagatgttttaattcactatttaatcttccataaagatcgattgaac 29385683  T
Q  114 atca 117  Q
    ||||    
T  29385682 atca 29385679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 43293211 - 43293143
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| |||||||| |||||||    
T  43293211 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcaccctttaat 43293143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 6469230 - 6469163
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| | |||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  6469230 agaagaagaaattcacttact-atatccaattgagtatggatgaaaaatattttgattcactctttaat 6469163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 38759922 - 38759854
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| ||| || |||| ||||||  |||||||||||| ||||||||||||||||    
T  38759922 agaagaagaaattcacttacttagatccaattgagtatcgatgaaaaatattttgattcactctttaat 38759854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 12188735 - 12188684
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaa 67  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||| |||||    
T  12188735 ttgaaaaagaagaagaaattcacttacttatatgcaatcaagtatggatgaa 12188684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 4622104 - 4622146
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  4622104 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 4622146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 10665327 - 10665285
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  10665327 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 10665285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 13210212 - 13210170
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  13210212 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 13210170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 18522923 - 18522965
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| |||||||||||| ||||||||||||||||||    
T  18522923 ctgggtgtaaccagaaatatatagaatgtgaatagaaaaactc 18522965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 18979386 - 18979428
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  18979386 ctgggtgtaactagaaatatatagggtgtgaatagaaaaactc 18979428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 37341753 - 37341795
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  37341753 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 37341795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 41881045 - 41881003
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  41881045 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 41881003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 37273963 - 37273922
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  37273963 tgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 37273922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 285
Target Start/End: Original strand, 40740083 - 40740123
Alignment:
Q  245 gggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  40740083 gggtgtaaccagaaatatatagggtgtgaatagaaaaactc 40740123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 31485569 - 31485612
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactcc 286  Q
    |||| |||||| ||||||||||||| ||||||||||||||||||    
T  31485569 ctggatgtaaccagaaatatatagggtgtgaatagaaaaactcc 31485612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 35318859 - 35318796
Alignment:
Q  28 aaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    |||||||| ||||| | ||||||||||||||||| | |||| || || ||||||||||||||||    
T  35318859 aaaaaattgacttactaatatgcaatcgagtatggaagaaagatgttttgattcactctttaat 35318796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 36294637 - 36294688
Alignment:
Q  17 tgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaa 68  Q
    ||||||||||||| ||||||||  | ||||||||||||||||||| ||||||    
T  36294637 tgaaaaagaagaagaaattcacacacttatatgcaatcgagtatggatgaaa 36294688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 42436493 - 42436455
Alignment:
Q  247 gtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  42436493 gtgtaaccagaaatatatagggtgtgaatagaaaaactc 42436455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 15021278 - 15021319
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||  ||||||||||||| |||||||||||||||||    
T  15021278 tgggtgtaatcagaaatatatagggtgtgaatagaaaaactc 15021319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 38769215 - 38769256
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| | ||||||||||| |||||||||||||||||    
T  38769215 tgggtgtaaccaaaaatatatagggtgtgaatagaaaaactc 38769256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 8e-63; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 20493397 - 20493567
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  20493397 aaaccagcgctattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 20493496  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| ||||||||||||| |||||| ||||    
T  20493497 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaatgaatg 20493567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 29042590 - 29042760
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  29042590 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 29042689  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  29042690 ttaattgaacatcaggattgtttgattgttggtgggtgaaagagagtggaattttagagtgacaatgaatg 29042760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 47540997 - 47541167
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||    
T  47540997 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgatttactctttaatcttccatagaga 47541096  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| ||||||||||||| |||||| ||||    
T  47541097 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaatgaatg 47541167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 48613532 - 48613697
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  48613532 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatacaatcgagtatgaatgaaagatattttgattcactctttaatcttccatagaga 48613631  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    |||||||||||||||||||| || || | |||||||||||| ||| ||||||||||||| ||||||    
T  48613632 ttaattgaacatcatgattgtttaatcgttggtgggtgaaaaagagtgaaattttagagtgacaat 48613697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 242208 - 242378
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| |||    
T  242208 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccataaaga 242307  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  242308 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaatgaatg 242378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 24981551 - 24981721
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  24981551 aaaccagcgttattaaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 24981650  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | ||||||||||||||||| | |||||||||| |||||| ||||    
T  24981651 ttaattgaacatcaagattgtttgatcgttggtgggtgaaagagaagggaattttagagtgacaatgaatg 24981721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 42435896 - 42435726
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||    
T  42435896 aaaccaacgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttcgatagaga 42435797  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||||||| |||||||||| ||||| | |||||||||||||||| ||||||||||||| |||||| ||||    
T  42435796 ttaattgaatatcatgattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaatgaatg 42435726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 25226141 - 25226304
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  25226141 aaaccagcgttattgaaaaggaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 25226240  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaa 168  Q
    |||||||||||||| ||||| ||||| | ||||||||||||||| ||| ||||||||||||||||    
T  25226241 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagag-atggaattttagagcgacaa 25226304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 12846922 - 12846752
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||  ||    
T  12846922 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccataacga 12846823  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| || || ||||| | |||||||||||||||| ||||||||||||| |||||| ||||    
T  12846822 ttaattgaacatcaggaatgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaatgaatg 12846752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 40863081 - 40863251
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| |||||||||||||||||||    
T  40863081 aaacccgcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcacgctttaatcttccatagaga 40863180  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||  ||||||||||||| |||||| ||||    
T  40863181 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagtgtgaaattttagagtgacaatgaatg 40863251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 47011018 - 47011188
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |    
T  47011018 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatattttgattcactctttaatcttccatagata 47011117  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||| |||||||  |||| ||||| | |||||||||||| ||| ||||||||||||| |||||| ||||    
T  47011118 ttaattaaacatcagaattgtttgatcgttggtgggtgaaaaagagtgaaattttagagtgacaatgaatg 47011188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 40305063 - 40304902
Alignment:
Q  1 ttaaaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatag 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||| || || |||||||||||||||||||||||||    
T  40305063 ttaaaaccagcgttattgaaaaagaagaaaaaattcacttatttatgtgtaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatag 40304964  T
Q  101 agattaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    |||||||||||||||||  |||| ||||| | |||||||||||||||| |||||||||||||    
T  40304963 agattaattgaacatcaaaattgtttgatcgttggtgggtgaaagagagtgaaattttagag 40304902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 46102398 - 46102569
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaa-aattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagag 102  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  46102398 aaaccagcgttattgaaaaagaagaaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatattttgattcactctttaatcttccgtagag 46102497  T
Q  103 attaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||||||||||||| ||||| ||||| | |||||||||||| ||| || |||||||||| |||||| ||||    
T  46102498 attaattgaacatcaagattgtttgatcgttggtgggtgaaaaagagtggaattttagagtgacaatgaatg 46102569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 7883360 - 7883190
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||||    
T  7883360 aaaccaacgttattgaaaaagaagaaaaaatccacttatttatatgcaatcgagtatcaatgaaagattttttgattcactctttaatcttccatagaga 7883261  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  7883260 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaatgaatg 7883190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 43501668 - 43501512
Alignment:
Q  18 gaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatca 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| || |||||||||||||||||||    
T  43501668 gaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatctttcaaagagattaattgaacatca 43501569  T
Q  118 tgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
     ||||| ||||| | |||||||||||||||| |||||||||||| ||||||| ||||    
T  43501568 ggattgtttgatcgttggtgggtgaaagagagtgaaattttagaccgacaatgaatg 43501512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 10594709 - 10594878
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  10594709 aaaccaacgttattaaaaaagaa-aaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 10594807  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| ||||||||||| | |||||| ||||    
T  10594808 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtgaaattttagtgtgacaatgaatg 10594878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 45869754 - 45869584
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| || |||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||| ||||||||| ||||||||||||||||||    
T  45869754 aaaccaacgttattaaaaaagaagaaaaaattcacttatttatattcaatcgagtgtgaatgaaagatattttgattcactttttaatcttccatagaga 45869655  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||| |||||| |||||||||| |||||| ||||    
T  45869654 ttaattgaacatcacgattgtttgatcgttggtgggtgaaaaagaatggaattttagagtgacaatgaatg 45869584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 43776991 - 43777149
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||    
T  43776991 aaaccagcattattgaaaaggaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatgttttgattcactctttaatcttctatagaga 43777090  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    |||||||||||||| ||||| ||||| | || |||| |||||||| || ||||||||||    
T  43777091 ttaattgaacatcaggattgtttgatcgttgatgggagaaagagagtggaattttagag 43777149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 48873916 - 48873753
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||||    
T  48873916 aaaccagcattattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtacgaatgaaaga-attttgattcactctttaatcttccatagaga 48873818  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaa 168  Q
    |||| ||||||||| ||||| ||||| | || |||||||||||||||| ||||||| || |||||    
T  48873817 ttaactgaacatcaagattgtttgatcgttgatgggtgaaagagaatggaattttaaagtgacaa 48873753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 30173097 - 30172929
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||| |  |||||    
T  30173097 aaaccaacgttattgaaaaagaagaaaaaattcacttatttatatacaatcgagtatgaatgacagatattttgattcactctttaatctttc--agaga 30173000  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||||||||| ||||| | ||||||||| |||||| || |||||||||| |||||| ||||    
T  30172999 ttaattgaacatcatgattgtttgatcgttggtgggtgcaagagagtggaattttagagtgacaatgaatg 30172929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 39597201 - 39597055
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||| || || |||||||||||||||||||||||| ||||||| |||||||    
T  39597201 ttgaaaaagaagaaaaaaatcacttatttatatgcaatcgagtatgaattaaagatgttttgattcactctttaatcttccatatagattaaatgaacat 39597102  T
Q  116 catgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    || ||||| ||||| | |||||| ||||||||| |||||||||||||    
T  39597101 caagattgtttgatcgttggtggctgaaagagagtgaaattttagag 39597055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 44709459 - 44709290
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || || ||||||| | |||||||||||||| |||    
T  44709459 aaaccagcgttattgaaaaagaa-aaaaatttcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcattgtttaatcttccatataga 44709361  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||  ||||| | |||||| ||||||||| ||||||||||||  |||||| ||||    
T  44709360 ttaattgaacatcaagattttttgatcgttggtggatgaaagagattgaaattttagaatgacaatgaatg 44709290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 36688198 - 36688040
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| |||||||||||||||||| |||||||||||||| ||||||||||| ||| ||| || || ||||||||||||||||||||||||||||    
T  36688198 aaaccatcgttattgaaaaagaagaaaaaaatcacttatttatatccaatcgagtataaattaaagatgttttgattcactctttaatcttccatagaga 36688099  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    |||||||||||||  ||||| ||||| | |||||| ||||||||| |  ||||||||||    
T  36688098 ttaattgaacatcgggattgtttgatcgttggtggatgaaagagagtagaattttagag 36688040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 12429520 - 12429598
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattca 82  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||    
T  12429520 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattca 12429598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 21 - 146
Target Start/End: Complemental strand, 19020718 - 19020592
Alignment:
Q  21 aaagaagaaaaaattcacttat--ttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcat 118  Q
    |||||| |||||| |||||| |  ||||||||||||||||||| |||||| || || |||||||||||||||||||||||||| ||| |||||||||||     
T  19020718 aaagaaaaaaaaaatcacttttacttatatgcaatcgagtatggatgaaagatgttttgattcactctttaatcttccatagaaattgattgaacatca- 19020620  T
Q  119 gattgcttgatagctggtgggtgaaaga 146  Q
    ||||| ||||| ||| ||||||||||||    
T  19020619 gattgtttgatcgcttgtgggtgaaaga 19020592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 41469663 - 41469564
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    |||||||||||||| |||||||||||||||||||||| ||| |||| |||||| || || |||||||| ||||||||||| ||||||||| |||||||||    
T  41469663 ttgaaaaagaagaagaaattcacttatttatatgcaaccgaatatggatgaaagatgttttgattcaccctttaatcttctatagagattgattgaacat 41469564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 48642422 - 48642536
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    |||||||||||||||||||||||||  |||||||||||||| |||||| |||| |  || ||||||||| ||||||||| |||||||||| |||||||||    
T  48642422 ttgaaaaagaagaaaaaattcacttgcttatatgcaatcgaatatgaacgaaagaagttttgattcactgtttaatctttcatagagattgattgaacat 48642521  T
Q  116 catgattgcttgatag 131  Q
    ||| |||| |||||||    
T  48642522 cat-attgtttgatag 48642536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 25236053 - 25236136
Alignment:
Q  84 tctttaatcttccatagagattaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaa 168  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||| ||| ||||||||||||||||    
T  25236053 tctttaatcttccatagagattaattgaacatcaggattgtttgatcgttggtgggtgaaagag-atggaattttagagcgacaa 25236136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 19474929 - 19475050
Alignment:
Q  53 tcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagctggtgggtgaaagagaatga 152  Q
    ||||||||| |||||| || || ||||||| |||||||||||||||||||||| ||||||||||| ||||  || || | | |||||||||||||| ||     
T  19474929 tcgagtatggatgaaagatgttttgattcattctttaatcttccatagagattgattgaacatcaagattcttttatcgtttgtgggtgaaagagattgg 19475028  T
Q  153 aattttagagcgacaataaatg 174  Q
    |||||||||| |||||| ||||    
T  19475029 aattttagagtgacaatgaatg 19475050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 32541658 - 32541590
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  32541658 agaagaagaaattcacttacttatatccaattgagtatgaatgaaaaatattttgattcactctttaat 32541590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 7901023 - 7901091
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  7901023 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 7901091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 21874023 - 21873955
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  21874023 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 21873955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 27325422 - 27325490
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  27325422 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 27325490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 32661847 - 32661779
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  32661847 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 32661779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 40704985 - 40704917
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  40704985 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 40704917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 40994378 - 40994310
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  40994378 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 40994310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 40995745 - 40995813
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  40995745 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 40995813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 42095027 - 42094947
Alignment:
Q  25 aagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagatt 105  Q
    ||||| ||||||||||| |||||| |||| ||||||| |||||||||||| |||||||||||||||| ||| || ||||||    
T  42095027 aagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaattttcaatggagatt 42094947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 43246505 - 43246437
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  43246505 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 43246437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 46321586 - 46321518
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  46321586 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 46321518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 46924460 - 46924528
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  46924460 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 46924528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 7791436 - 7791504
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||| ||||||    
T  7791436 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactttttaat 7791504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 8215191 - 8215123
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||  |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  8215191 agaagaagaaattcactttcttatatccaattgagtatggatgaaaaatattttgattcactctttaat 8215123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 19699578 - 19699646
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||  |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  19699578 agaagaagaaattcacttgcttatatccaattgagtatggatgaaaaatattttgattcactctttaat 19699646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 21278531 - 21278463
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||| ||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  21278531 agaagaagaaattcaattacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 21278463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 25877360 - 25877428
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||| ||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  25877360 agaagaagaaattcaattacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 25877428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 26015364 - 26015296
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| ||||| ||||||||||||||||    
T  26015364 agaagaagaaattcacttacttatattcaattgagtatggatgaaagatattttgattcactctttaat 26015296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 35924687 - 35924755
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| | ||||||||||||||    
T  35924687 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttaattcactctttaat 35924755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 47065414 - 47065346
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||| | |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  47065414 agaagaagaaattcactcacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 47065346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 47779033 - 47778965
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||||||||||| ||| |||||| |||| ||||||| |||||||||||| | ||||||||||||||    
T  47779033 agaagaaaaaattcaattacttatatccaattgagtatggatgaaaaatatttttattcactctttaat 47778965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 38283191 - 38283126
Alignment:
Q  26 agaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    |||| ||||||| ||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  38283191 agaagaaattcaattacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 38283126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 7883121 - 7883079
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||| |||||||||||||||||||    
T  7883121 ctgggtgtaaccagaaatatataagatgtgaatagaaaaactc 7883079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 10594947 - 10594989
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  10594947 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 10594989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 20493637 - 20493679
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  20493637 ctgggtgtaacaaaaaatatatagggtgtgaatagaaaaactc 20493679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 42435657 - 42435615
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||| |||||| |||||||||||||||||||||||||||||||    
T  42435657 ctggatgtaaccagaaatatataggatgtgaatagaaaaactc 42435615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 44709220 - 44709178
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  44709220 ctggatgtaacaaaaaatatataggatgtgaatagaaaaactc 44709178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 47541237 - 47541279
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  47541237 ctgggtgtaacaaaaaatatatagggtgtgaatagaaaaactc 47541279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 48613771 - 48613813
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  48613771 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 48613813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 21203097 - 21203000
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaac 113  Q
    ||||||||||| || ||||||| ||| ||||||||||| ||||||  |||||| || || ||||| | | |||||| ||| ||||||||| |||||||    
T  21203097 ttgaaaaagaataagaaattcaattacttatatgcaatagagtatagatgaaagatgttttgatttattatttaatattctatagagattgattgaac 21203000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 30172856 - 30172815
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  30172856 tgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 30172815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 34012843 - 34012770
Alignment:
Q  43 ttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatc 116  Q
    ||||||||||| || |||| ||| || || || |||||||||||||||||||  ||||||||| ||||||||||    
T  34012843 ttatatgcaatagaatatggatggaagatgttttgattcactctttaatcttttatagagattgattgaacatc 34012770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 46102634 - 46102673
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaa 282  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  46102634 ctgggtgtaaccaaaaatatataggatgtgaatagaaaaa 46102673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 286
Target Start/End: Complemental strand, 36687957 - 36687915
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactcc 286  Q
    |||||||||| | ||||||||||| ||||||||||||||||||    
T  36687957 tgggtgtaaccaaaaatatatagggtgtgaatagaaaaactcc 36687915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 37544862 - 37544912
Alignment:
Q  66 aaaaatattctgattcactctttaatcttccatagagattaattgaacatc 116  Q
    ||||||||| |||||||||||||||||||  |||| |||| ||||||||||    
T  37544862 aaaaatattttgattcactctttaatcttttatagtgattgattgaacatc 37544912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 12846682 - 12846641
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| ||||||||||||| ||| |||||||||||||    
T  12846682 tgggtgtaaccagaaatatatagggtgtaaatagaaaaactc 12846641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 19475120 - 19475161
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| |||||||||| || |||||||||||||||||    
T  19475120 tgggtgtaaccagaaatatatggggtgtgaatagaaaaactc 19475161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 24981791 - 24981832
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||  ||||||||| |||||||||||||||||||||    
T  24981791 tgggtgtaatcagaaatatacaggatgtgaatagaaaaactc 24981832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 34592267 - 34592333
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||  |||| || ||||||||||||||||    
T  34592267 agaagaagaaattcacttacttatatccaattgagtatggatg--aaattttttgattcactctttaat 34592333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 39073891 - 39073850
Alignment:
Q  50 caatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    |||| ||||||| |||||||||||| ||||||||||||||||    
T  39073891 caattgagtatggatgaaaaatattttgattcactctttaat 39073850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 39596972 - 39596931
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||  ||||||||||||| |||||||||||||||||    
T  39596972 tgggtgtaatcagaaatatatagggtgtgaatagaaaaactc 39596931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 45236582 - 45236509
Alignment:
Q  43 ttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatc 116  Q
    ||||||||||| ||||||| |||||| || || ||||||||||| || ||||| || |||| | ||||||||||    
T  45236582 ttatatgcaattgagtatggatgaaagatgttttgattcactctctattcttctatggagagtgattgaacatc 45236509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 47011258 - 47011299
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| ||||||||||||| ||||||||| |||||||    
T  47011258 tgggtgtaaccagaaatatatagggtgtgaataggaaaactc 47011299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 48873678 - 48873637
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaact 284  Q
    ||||||||||| ||||||||||| | ||||||||||||||||    
T  48873678 ctgggtgtaaccagaaatatataaggtgtgaatagaaaaact 48873637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 38875592 - 38875556
Alignment:
Q  55 gagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  38875592 gagtatggatgaaaaatattttgattcactctttaat 38875556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 8e-63; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 13073751 - 13073921
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  13073751 aaaccagcgttattgaaaaagaagataaaattcacttatttatatgcaatcgagtatgaatgaaagattttttgattcactctttaatcttccatagaga 13073850  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||| | ||||| ||||| | |||||||||||||||| ||||||||||||| |||||||||||    
T  13073851 ttaattgaacatgaggattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaataaatg 13073921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 4 - 170
Target Start/End: Complemental strand, 29921322 - 29921156
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||| |||||||||||||||    
T  29921322 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactcttcaatcttccatagaga 29921223  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaata 170  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| ||||||||||||| |||||||    
T  29921222 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaata 29921156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 46291157 - 46290987
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  46291157 aaaccagcgttattgaaaaagaagaaaaaattcacttatttgtatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 46291058  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| |||||||||||    
T  46291057 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagattgtaattttagagtgacaataaatg 46290987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 48933927 - 48934097
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  48933927 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 48934026  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  48934027 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaatgaatg 48934097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 51001467 - 51001297
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| |||||||||||||||||||    
T  51001467 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcacgctttaatcttccatagaga 51001368  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||| ||||||||||||||||||||||| |||||| ||||    
T  51001367 ttaattgaacatcaggattgtttgatcgttggtggatgaaagagaatgaaattttagagtgacaatgaatg 51001297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 32087125 - 32087295
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  32087125 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 32087224  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||| ||||||||| ||||||||||| | |||||| ||||    
T  32087225 ttaattgaacatcaggattgtttgatcgttggtggatgaaagagagtgaaattttagtgtgacaatgaatg 32087295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 41713479 - 41713649
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| |||    
T  41713479 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatataga 41713578  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| ||||||||||| | |||||| ||||    
T  41713579 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtgaaattttagtgtgacaatgaatg 41713649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 19247335 - 19247171
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||||||||| ||||||||||||||||||    
T  19247335 aaaccagcgttattgaaaaagaagaaaaaattcactaatttatatgcaatcgagtatgaatgaaagatgttttgattcactatttaatcttccatagaga 19247236  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaa 168  Q
    |||||||||||||||||||| ||||| | |||||||||||||||| || |||||||||| |||||    
T  19247235 ttaattgaacatcatgattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaa 19247171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 26308215 - 26308385
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  26308215 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 26308314  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||| | || ||||||| || |||||| ||||    
T  26308315 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagaaagtggaattttaaagtgacaatgaatg 26308385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 5673510 - 5673675
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  5673510 aaaccaacgttattgaaaaagaagaaaaaattcacttatttttatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 5673609  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| ||||||||||| | ||||||    
T  5673610 ttaattgaacatcaggattgtttgattgttggtgggtgaaagagagtgaaattttagtgtgacaat 5673675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 23443731 - 23443574
Alignment:
Q  5 aaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagat 104  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||    
T  23443731 aaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagagat 23443632  T
Q  105 taattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    ||||||||||||| ||||| ||||| | |||||| ||||||||| || ||||||||||    
T  23443631 taattgaacatcaggattgtttgatcgttggtggttgaaagagattgtaattttagag 23443574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 35274475 - 35274640
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| |||||    
T  35274475 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccacagaga 35274574  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    |||||||||||||| ||||| ||||| | ||||||||||||| || ||||||||||| | ||||||    
T  35274575 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagtgagtgaaattttagcgtgacaat 35274640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 32117508 - 32117338
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| || || ||||||||||||||||||||||||||||    
T  32117508 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcaagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 32117409  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | || | ||||||||||| || |||||||||| |||||| ||||    
T  32117408 ttaattgaacatcaggattgtttgatcgttgataggtgaaagagagtggaattttagagtgacaatgaatg 32117338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 32562075 - 32562234
Alignment:
Q  16 ttgaaaaagaagaaaa-aattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaaca 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||    
T  32562075 ttgaaaaagaagaaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatattttgattaacactttaatcttccatagagattaattgaaca 32562174  T
Q  115 tcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||| ||||| ||||| | |||||||||||||||| ||||||||||||| |||||| ||||    
T  32562175 tcaggattgtttgatcgttggtgggtgaaagagagtgaaattttagagtgacaatgaatg 32562234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 17702638 - 17702808
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| || || |||||||||||||||||||| |||||||    
T  17702638 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgtaatcgagtatgaatgaaagatgttttgattcactctttaatcttcgatagaga 17702737  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||||||||||||  |||| || || | |||||||||||||||| || |||||||||| |||||| ||||    
T  17702738 ttaattgaacatcagaattgtttaatcgttggtgggtgaaagagagtggaattttagagtgacaattaatg 17702808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 8113301 - 8113138
Alignment:
Q  11 cgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattg 110  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||||||    
T  8113301 cgttattgaaaaagaaaaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagacattaattg 8113202  T
Q  111 aacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||||| ||||| ||||| | |||||||||||||||| || |||||| ||| |||||| ||||    
T  8113201 aacatcaagattgtttgatcgttggtgggtgaaagagagtggaatttttgagtgacaatgaatg 8113138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 6016049 - 6015891
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| || || ||||| |||||||||||||| |||||||    
T  6016049 aaaccagcattattgaaaaagaagaaaaaattcacttatttatatgcaatagagtatgaatgaaagatgttttgattgactctttaatcttctatagaga 6015950  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    |||||||||||||||||||| || || | |||||||||||||||| || ||||||||||    
T  6015949 ttaattgaacatcatgattgtttaatcgttggtgggtgaaagagagtggaattttagag 6015891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 17475024 - 17475182
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || | |||||||||||||||||| |||||||    
T  17475024 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgtttttattcactctttaatcttctatagaga 17475123  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    |||||||||||||| ||||| ||||| | |  ||||||||||||| || ||||||||||    
T  17475124 ttaattgaacatcaggattgtttgatcgttaatgggtgaaagagagtggaattttagag 17475182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 40499181 - 40499339
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||| || || ||||||||||||||||||| ||||||||    
T  40499181 aaaccagcgttattgaaaaagaagaaaaaattcgattatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatctttcatagaga 40499280  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    |||||||||||||| ||||| ||||| | | |||||||||||||| || ||||||||||    
T  40499281 ttaattgaacatcaggattgtttgatcgttagtgggtgaaagagagtggaattttagag 40499339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 12602550 - 12602718
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||| ||||||||    
T  12602550 aaaccagcgttattgaaaa-gaagaaaaaattcacttatttatatgcaatcgagtataaatgaaatatattttgattcactctttaatctttcatagaga 12602648  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||| | | | |||||||||| || |||||||||||    
T  12602649 ttaattgaacatcaggattgtttgatcgttggtgggtgaga-aaagtgaaattttatagtgacaataaatg 12602718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 45942077 - 45942247
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||| || || |||||||||||||||||||| ||| |||    
T  45942077 aaaccagcgttattgaaaaagaaggaaaaattcacttatttatatgcaatcgagtatgaattaaagatgttttgattcactctttaatcttctatataga 45942176  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | || ||||||||||| | || |||||||||| |||||| ||||    
T  45942177 ttaattgaacatcaggattgtttgatcgttgatgggtgaaagatagtggaattttagagtgacaatgaatg 45942247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 19513651 - 19513487
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| || || ||||||||||||||||||| |||| |||    
T  19513651 aaaccagcgttattgaaaaa-aagaaaaaattcacttgtttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttacataaaga 19513553  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || ||||||| || ||||||    
T  19513552 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttaaagtgacaat 19513487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 1702459 - 1702617
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    ||||||||||| ||||| ||||||| |||||| ||||||||||||||||||||  | || ||||||| |||||||||||||||||| |||||||||||||    
T  1702459 ttgaaaaagaaaaaaaatttcacttttttatacgcaatcgagtatgaatgaaaggtgttttgattcattctttaatcttccatagaaattaattgaacat 1702558  T
Q  116 catgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    || ||||| ||||| | |||||||||||||||| ||||||||||||| |||||||||||    
T  1702559 caagattgtttgattgttggtgggtgaaagagagtgaaattttagagtgacaataaatg 1702617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 14289730 - 14289617
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||| ||||||||||||||| |||||||    
T  14289730 aaaccagctttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgatccactctttaatcttcaatagaga 14289631  T
Q  104 ttaattgaacatca 117  Q
    ||||||||||||||    
T  14289630 ttaattgaacatca 14289617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 1441968 - 1442067
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| || || ||||||| ||||||||||| |||||||||| |||||||||    
T  1441968 ttgaaaaagaagaagaaattcatttacttatatgcaatcgagtatggatgaaatatgttttgattcattctttaatctttcatagagattgattgaacat 1442067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 9640098 - 9640011
Alignment:
Q  87 ttaatcttccatagagattaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||||||||||||||||||||  |||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  9640098 ttaatcttccatagagattaattgaacatcagaattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaatgaatg 9640011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 45926088 - 45926177
Alignment:
Q  35 tcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat-catgattg 123  Q
    ||||||| ||||||||||||||||||| |||||| || || |||||||||||| ||||||| ||||||||| ||||||||| ||||||||    
T  45926088 tcacttacttatatgcaatcgagtatggatgaaagatgttttgattcactcttcaatcttctatagagattgattgaacatacatgattg 45926177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 24663756 - 24663648
Alignment:
Q  21 aaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatga 120  Q
    |||||| || ||| ||||||| ||||||| |||||||||||  ||||| || || | ||||||||||||||||| |||||||||| ||||||||||| ||    
T  24663756 aaagaaaaataaaatcacttacttatatgaaatcgagtatgggtgaaagatgttttaattcactctttaatctttcatagagattgattgaacatcagga 24663657  T
Q  121 ttgcttgat 129  Q
    ||| |||||    
T  24663656 ttgtttgat 24663648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 2482188 - 2482120
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  2482188 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 2482120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 14246777 - 14246709
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||||||||||||||| |||||| |||| ||||||| ||| |||||||| ||||||||||||||||    
T  14246777 agaagaaaaaattcacttacttatatccaattgagtatggatgtaaaatattttgattcactctttaat 14246709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 18909731 - 18909799
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  18909731 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 18909799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 20582153 - 20582221
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  20582153 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 20582221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 24317736 - 24317804
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  24317736 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 24317804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 24527147 - 24527024
Alignment:
Q  53 tcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagctggtgggtgaaag--agaat 150  Q
    ||||||||| |||||| || || | |||||||||||||||||||||| ||||| ||||||||||| ||||| ||||| | | || ||||||||  | | |    
T  24527147 tcgagtatggatgaaagatgttttaattcactctttaatcttccataaagattgattgaacatcaggattgtttgattgtttgttggtgaaagatatagt 24527048  T
Q  151 gaaattttagagcgacaataaatg 174  Q
    |||||||||||| |||||| ||||    
T  24527047 gaaattttagagtgacaatgaatg 24527024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 26164057 - 26163989
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  26164057 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 26163989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 39568913 - 39568845
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  39568913 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 39568845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 39982927 - 39982995
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  39982927 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 39982995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 49823756 - 49823824
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  49823756 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 49823824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 51290837 - 51290905
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  51290837 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 51290905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 51676750 - 51676682
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  51676750 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 51676682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 49 - 174
Target Start/End: Original strand, 3486366 - 3486494
Alignment:
Q  49 gcaatcgagtatgaatgaaaaatattctgattcactctttaatcttcc---atagagattaattgaacatcatgattgcttgatagctggtgggtgaaag 145  Q
    ||||||||||||| ||||||||| || |||||||||||||||||||||   | ||||||| ||||||||||| | ||| |||||   |  ||||||||||    
T  3486366 gcaatcgagtatggatgaaaaatgttttgattcactctttaatcttccgtaacagagattgattgaacatcaagtttgtttgatcatttctgggtgaaag 3486465  T
Q  146 agaatgaaattttagagcgacaataaatg 174  Q
    ||  || |||||||||| |||||| ||||    
T  3486466 agtgtggaattttagagtgacaatgaatg 3486494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 2137897 - 2137829
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||| ||||||||    
T  2137897 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcattctttaat 2137829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 7009658 - 7009771
Alignment:
Q  53 tcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagctggtgggtgaaagagaatga 152  Q
    ||||||||| |||||| || || ||||||||||||||||        |||||| ||||||||||||||||| ||||| | | |||||||||||||| ||     
T  7009658 tcgagtatggatgaaagatgttttgattcactctttaat--------gagattgattgaacatcatgattgtttgatcgtttgtgggtgaaagagattgg 7009749  T
Q  153 aattttagagcgacaataaatg 174  Q
    |||||||||| |||||| ||||    
T  7009750 aattttagagtgacaatgaatg 7009771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 11172881 - 11172813
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| ||| |||||||| ||||||||||||||||    
T  11172881 agaagaagaaattcacttacttatatccaattgagtatggatgtaaaatattttgattcactctttaat 11172813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 40400581 - 40400649
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||| ||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  40400581 agaagaagaaattcaattacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 40400649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 42948747 - 42948815
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| ||||||  ||| ||||||| |||||||||||| ||||||||||||||||    
T  42948747 agaagaagaaattcacttacttatatctaattgagtatgtatgaaaaatattttgattcactctttaat 42948815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 44722462 - 44722530
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| | ||||||||||||||    
T  44722462 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttaattcactctttaat 44722530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 52025207 - 52025275
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| ||||||  ||| ||||||| |||||||||||| ||||||||||||||||    
T  52025207 agaagaagaaattcacttacttatatcgaattgagtatggatgaaaaatattttgattcactctttaat 52025275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 52043931 - 52043863
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||  |||||||||||| ||||||||||||||||    
T  52043931 agaagaagaaattcacttacttatatccaattgagtatagatgaaaaatattttgattcactctttaat 52043863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 1701562 - 1701471
Alignment:
Q  25 aagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatc 116  Q
    ||||| ||||||| ||| || |||| ||||||||||| |||||| ||| | |||||||||||||||||||||||| | ||| || |||||||    
T  1701562 aagaagaaattcatttacttgtatgaaatcgagtatggatgaaagataatttgattcactctttaatcttccatataaattgatcgaacatc 1701471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 13234857 - 13234776
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagatt 105  Q
    ||||||| ||||||||||| ||| || |||| ||||| | |||||||||||| |||||||||||||||| |||||| ||||||    
T  13234857 agaagaagaaattcacttacttagatccaattgagtagggatgaaaaatattttgattcactctttaat-ttccatggagatt 13234776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 34270299 - 34270231
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||| | | ||||||||||||||||    
T  34270299 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaaaaatttgattcactctttaat 34270231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 8113069 - 8113027
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  8113069 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 8113027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 9639940 - 9639898
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  9639940 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 9639898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 17702876 - 17702918
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  17702876 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 17702918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 23443506 - 23443464
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  23443506 ctgggtgtaaccagaaatatataggttgtgaatagaaaaactc 23443464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 32562303 - 32562344
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaact 284  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  32562303 ctgggtgtaacaaaaaatatatagggtgtgaatagaaaaact 32562344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 51001227 - 51001186
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  51001227 tgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 51001186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 29921081 - 29921041
Alignment:
Q  245 gggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  29921081 gggtgtaaccagaaatatatagggtgtgaatagaaaaactc 29921041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 34276514 - 34276466
Alignment:
Q  43 ttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  34276514 ttatatccaattgagtatggatgaaaaatattttgattcactctttaat 34276466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 40536184 - 40536116
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||| ||| |||||| |||| ||||||| |||||||||||| | ||||| ||||||||    
T  40536184 agaagaagaaattcagttacttatatccaattgagtatggatgaaaaatattttaattcaatctttaat 40536116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 28852344 - 28852297
Alignment:
Q  44 tatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  28852344 tatatccaattgagtatggatgaaaaatattttgattcactctttaat 28852297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 19513413 - 19513371
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||| |||||| ||||||||||||| |||||||||||||||||    
T  19513413 ctggatgtaaccagaaatatatagggtgtgaatagaaaaactc 19513371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 32087367 - 32087409
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||| |||||| ||||||||||||| |||||||||||||||||    
T  32087367 ctggatgtaaccagaaatatatagggtgtgaatagaaaaactc 32087409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 281
Target Start/End: Original strand, 41713718 - 41713756
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaa 281  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  41713718 ctgggtgtaaccagaaatatatagggtgtgaatagaaaa 41713756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 45942316 - 45942358
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||| |||||| ||||||||||||| |||||||||||||||||    
T  45942316 ctggatgtaactagaaatatatagggtgtgaatagaaaaactc 45942358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 17475268 - 17475305
Alignment:
Q  248 tgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  17475268 tgtaaccagaaatatatagggtgtgaatagaaaaactc 17475305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 50728414 - 50728480
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||   || ||||||||||||||||    
T  50728414 agaagaagaaattcacttacttatatccaattgagtatggatgaaaa--tttttgattcactctttaat 50728480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 9263495 - 9263543
Alignment:
Q  76 tgattcactctttaatcttccatagagattaattgaaca-tcatgattg 123  Q
    |||||||||||||||| ||| ||||||||| |||||||| |||||||||    
T  9263495 tgattcactctttaatattctatagagattgattgaacattcatgattg 9263543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 2e-60; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 8525852 - 8526022
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  8525852 aaaccagcattactgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatattttgattcactctttaatcttccatagaga 8525951  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | || ||||||||||||| ||||||||||||| |||||| ||||    
T  8525952 ttaattgaacatcaggattgtttgatcgttgatgggtgaaagagagtgaaattttagagtgacaatgaatg 8526022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 31090725 - 31090555
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  31090725 aaaccagcgctattgaaaaagaagaaaaaatgcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 31090626  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||| || |||||||||| |||||| ||||    
T  31090625 ttaattgaacatcaggattgtttgatagttggtgggtgaaagagagtggaattttagagtgacaatgaatg 31090555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 6926449 - 6926619
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || | ||||||||||||||||||||||||||    
T  6926449 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttaattcactctttaatcttccatagaga 6926548  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||| ||||||||||| || |||||||||| |||||| ||||    
T  6926549 ttaattgaacatcaggattgtttgatcgttggtaggtgaaagagagtggaattttagagtgacaatgaatg 6926619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 29622854 - 29622684
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||||    
T  29622854 aaaccaacgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtataaatgaaagatgttttgattcactctttaatcttccatagaga 29622755  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  29622754 ttaattgaacatcaagattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaatgaatg 29622684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 8 - 174
Target Start/End: Original strand, 5715490 - 5715655
Alignment:
Q  8 cagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaa 107  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||| || || ||| ||||||||||||||||||||||||||||    
T  5715490 cagcgttattgaaaaagaagaaaaaaatcacttatttatatgcaatccagtatgaatgaaagatgttttgagtcactctttaatcttccatagagattaa 5715589  T
Q  108 ttgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||| ||||| ||||| | |||||||||||||||| ||||||||||||| |||||| ||||    
T  5715590 ttgaacatcaggattgtttgat-gttggtgggtgaaagagagtgaaattttagagtgacaatgaatg 5715655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 13444712 - 13444555
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||| || || |||||||||||||||||||||||| |||    
T  13444712 aaaccagcgttattgaaaaagaagaaaaaaatcacttatttatgtgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatataga 13444613  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttaga 161  Q
    |||||||||||||| ||||| |||||   |||||| ||||||||| ||||||||||||    
T  13444612 ttaattgaacatcaggattgtttgatccttggtggatgaaagagagtgaaattttaga 13444555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 29880904 - 29880735
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||||| || ||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||| || || |||||||||||||||||||||||| |||    
T  29880904 aaaccagcattattgaaaaagaa-aaaaaatccacttatttatatccaatcgagtatgaataaaagatgttttgattcactctttaatcttccataaaga 29880806  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | || |||||||||||||||| |||||||||| |||||| ||||    
T  29880805 ttaattgaacatcaggattgtttgatcgttgatgggtgaaagagaatggaattttagagtgacaattaatg 29880735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 34085236 - 34085079
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| || || ||| ||||||||||||||||||||||||    
T  34085236 aaaccagcgttattgaaaaagaaaaaaaaaatcacttatttatatgcaatcgagtatgaatgaaagatgttttga-tcactctttaatcttccatagaga 34085138  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    ||||||||| |||| ||||| ||||| | ||||| |||||||||| || ||||||||||    
T  34085137 ttaattgaatatcaggattgtttgatcgttggtgtgtgaaagagagtggaattttagag 34085079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 11368313 - 11368155
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || || ||| | |||||||||||||| |||||||    
T  11368313 aaaccagagttattgaaaaggaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgacttactctttaatcttctatagaga 11368214  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    |||||||||| ||| ||||| |||||   || ||||||||||||| || ||||||||||    
T  11368213 ttaattgaacttcaggattgtttgatcattgatgggtgaaagagagtggaattttagag 11368155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 18024748 - 18024898
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| || || |||||||||| ||||||||||||||||||| |||||||||    
T  18024748 ttgaaaaagaagaagaaattcagttacttatatgcaatcgagtatggatgaaagattttttgattcactccttaatcttccatagagattgattgaacat 18024847  T
Q  116 catgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgaca 167  Q
    || ||||| ||||| | | || | ||||||||| ||||||||||||| ||||    
T  18024848 caggattgtttgatcgtttgt-gatgaaagagagtgaaattttagagtgaca 18024898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 6675354 - 6675257
Alignment:
Q  19 aaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatc 116  Q
    ||||||||||  |||| |||||||||||||||||||||||||| |||||| || || |||||||||||||||||||| ||||||||| ||||||||||    
T  6675354 aaaaagaagaggaaatccacttatttatatgcaatcgagtatggatgaaagatgttttgattcactctttaatcttctatagagattgattgaacatc 6675257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 7082113 - 7082242
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    |||||||||||||| ||||||||||| |||||||||||||||| || |||| | ||||| |||||||||||||||||||||||  ||||| |||||||||    
T  7082113 ttgaaaaagaagaagaaattcacttacttatatgcaatcgagtttggatgagagatattttgattcactctttaatcttccatgtagattgattgaacat 7082212  T
Q  116 -catgattgcttgatagctggtgggtgaaa 144  Q
      ||||||| ||||| | | ||||||||||    
T  7082213 ggatgattgtttgatcgtttgtgggtgaaa 7082242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 17314880 - 17315031
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaaca- 114  Q
    |||||||||||||| ||||||| ||| ||||||||||| ||||||| |||||| || || ||||||||||||||||| |  ||| ||||| ||||||||     
T  17314880 ttgaaaaagaagaagaaattcagttacttatatgcaatagagtatggatgaaatatgttttgattcactctttaatcctttataaagattgattgaacat 17314979  T
Q  115 tcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||||||| ||        |||| ||||||||| |||||||||||||  ||||||||||    
T  17314980 tcatgattgttt--------gtggctgaaagagagtgaaattttagagtaacaataaatg 17315031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 8810243 - 8810114
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    |||||||||||||| ||||||||||| ||||||||||| |||| || |||| | || || |||||||||||||||||||||||   |||| |||||||||    
T  8810243 ttgaaaaagaagaagaaattcacttacttatatgcaattgagtttggatgagagatgttttgattcactctttaatcttccatgttgattgattgaacat 8810144  T
Q  116 c-atgattgcttgatagctggtgggtgaaa 144  Q
    | ||||||| || || | | ||||||||||    
T  8810143 cgatgattgtttcatcgtttgtgggtgaaa 8810114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 49 - 174
Target Start/End: Complemental strand, 32173139 - 32173007
Alignment:
Q  49 gcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccat---agagattaattgaacatca----tgattgcttgatagctggtgggtg 141  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||||||   ||||||| |||||||||||    || ||| ||||| | |  ||||||    
T  32173139 gcaatcgagtatagatgaaaaatattttgattcactctttaatcttccataacagagattgattgaacatcaggtttgtttgtttgattgtttctgggtg 32173040  T
Q  142 aaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||||| ||||||||||||| |||||| ||||    
T  32173039 aaagagagtgaaattttagagtgacaatgaatg 32173007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 18894301 - 18894369
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  18894301 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 18894369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 26947302 - 26947222
Alignment:
Q  32 aattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaa 112  Q
    |||||||||| ||||||||||| ||| |||||||||| || || |||||||||||| ||||||| ||||||||| ||||||    
T  26947302 aattcacttacttatatgcaattgagaatgaatgaaagatgttttgattcactcttcaatcttctatagagattgattgaa 26947222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 6167513 - 6167446
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaa 90  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| |||||||||||||||    
T  6167513 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaa 6167446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 3095103 - 3095171
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| ||||| |||||| ||||||||||||||||    
T  3095103 agaagaagaaattcacttacttatatccaattgagtatggatgaagaatattttgattcactctttaat 3095171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 13889564 - 13889504
Alignment:
Q  31 aaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  13889564 aaattcacttacttatattcaattgagtatggatgaaaaatattttgattcactctttaat 13889504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 25332407 - 25332347
Alignment:
Q  31 aaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  25332407 aaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 25332347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 29121881 - 29121813
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||| ||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  29121881 agaagaagaaattcatttacttatatccaattgagtatgtatgaaaaatattttgattcactctttaat 29121813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 29630028 - 29629960
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||| ||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  29630028 agaagaagaaattcaattacttatattcaattgagtatggatgaaaaatattttgattcactctttaat 29629960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 6625892 - 6625958
Alignment:
Q  25 aagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||| ||||||||||| |||||| |||| ||||||| |||||||||||| |||||| |||||||||    
T  6625892 aagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattccctctttaat 6625958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 7141772 - 7141838
Alignment:
Q  25 aagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||| ||||||||||| |||||| |||| ||||||| |||||||||||| |||||| |||||||||    
T  7141772 aagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattccctctttaat 7141838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 14253214 - 14253161
Alignment:
Q  63 atgaaaaatattctgattcactctttaatcttccatagagattaattgaacatc 116  Q
    |||||||||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  14253214 atgaaaaatattttgattcactctttaatcttttatagagattgattgaacatc 14253161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 34084998 - 34084956
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  34084998 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 34084956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 285
Target Start/End: Complemental strand, 34084740 - 34084701
Alignment:
Q  246 ggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  34084740 ggtgtaaccagaaatatatagggtgtgaatagaaaaactc 34084701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 5715724 - 5715766
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| |||||||||||||  ||||||||||||||||    
T  5715724 ctgggtgtaaccagaaatatatagggcgtgaatagaaaaactc 5715766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 6926688 - 6926730
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||| ||||||||||| | |||||||||||||||||    
T  6926688 ctgggtgtaaccagaaatatataaggtgtgaatagaaaaactc 6926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 31090485 - 31090443
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||| |||||| ||||||||||||| |||||||||||||||||    
T  31090485 ctggatgtaaccagaaatatatagggtgtgaatagaaaaactc 31090443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 8526092 - 8526133
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| | ||||||||||| |||||||||||||||||    
T  8526092 tgggtgtaaccaaaaatatatagggtgtgaatagaaaaactc 8526133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 11368074 - 11368033
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaact 284  Q
    |||| |||||| ||||||||||||| ||||||||||||||||    
T  11368074 ctggatgtaaccagaaatatatagggtgtgaatagaaaaact 11368033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 2e-60; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 16313076 - 16312906
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||||||||| ||||||||    
T  16313076 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgactcactctttaatctttcatagaga 16312977  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||||||||| || ||||| ||||| | |||||||||||||||||||||||||||||| |||||| ||||    
T  16312976 ttaattgaacaacaggattgtttgatcgttggtgggtgaaagagaatgaaattttagagtgacaatgaatg 16312906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 4072845 - 4072680
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  4072845 aaaccagcgttattgaaaaagaagaaaaaattcacctatttatatacaatcgagtatgaatgaaagatattttgattcactctttaatcttccatagaga 4072746  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| ||||||    
T  4072745 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaat 4072680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 16 - 169
Target Start/End: Complemental strand, 4330973 - 4330820
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  4330973 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatattttgattcactctttaatcttccatagagattaattgaacat 4330874  T
Q  116 catgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    || ||||| |||||   |||||||||||||||| ||||||||||||| ||||||    
T  4330873 caggattgtttgatcattggtgggtgaaagagagtgaaattttagagtgacaat 4330820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 4 - 167
Target Start/End: Complemental strand, 8034216 - 8034053
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  8034216 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 8034117  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgaca 167  Q
    |||||||||||||| ||||| ||||| | |||||| ||||||||| || |||||||||| ||||    
T  8034116 ttaattgaacatcaggattgtttgatcgttggtggatgaaagagagtggaattttagagtgaca 8034053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 26171742 - 26171900
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||    
T  26171742 aaaccagcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatattttgattcactctttaatcttccaaagaga 26171841  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    |||||||||||| | ||||| ||||| | |||||||||||| ||| |||||||||||||    
T  26171842 ttaattgaacattaggattgtttgatcgttggtgggtgaaaaagagtgaaattttagag 26171900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 7721989 - 7721824
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  | ||||||||||||||||||||||||||||    
T  7721989 aaaccaacgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatggtttgattcactctttaatcttccatagaga 7721890  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| ||||||    
T  7721889 ttaattgaacatcaagattgtttgatcgttggtgggtgaaagagagtggaattttagagtgacaat 7721824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 10522252 - 10522421
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  10522252 aaaccaacgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 10522351  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | ||| |||||||||||| || |||||||||| |||||| ||||    
T  10522352 ttaattgaacatcaggattg-ttgatcgttggcgggtgaaagagagtggaattttagagtgacaatgaatg 10522421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 44456297 - 44456139
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  44456297 aaaccagtgttattaaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 44456198  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || ||||||||||    
T  44456197 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttagag 44456139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 13479921 - 13479751
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||  |||||||||||||||||||||||||||    
T  13479921 aaaccaacgttattgaaaaagaaaaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgtttggattcactctttaatcttccatagaga 13479822  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| || || | ||||| |||||||||| || |||||||||| |||||| ||||    
T  13479821 ttaattgaacatcaggattgtttaatcgttggtgagtgaaagagagtggaattttagagtgacaatgaatg 13479751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 16 - 169
Target Start/End: Complemental strand, 38628508 - 38628355
Alignment:
Q  16 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| |||||||||||||||||||| ||    
T  38628508 ttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatattccatagagattaattgaaaat 38628409  T
Q  116 catgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    || ||||| |||||   || ||||||||||||| ||||||||||||| ||||||    
T  38628408 caggattgtttgatcattgatgggtgaaagagagtgaaattttagagtgacaat 38628355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 31569141 - 31568987
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| || || |||||||||||||||||||| |||||||    
T  31569141 aaaccagcgttgtttaaaaagaagaaaaa-ttcacttatttatatgcgatcgagtatgaatgaaagatgttttgattcactctttaatcttctatagaga 31569043  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaatttta 159  Q
    |||||| ||||||| ||||| ||||| | |||||||||||||||| || |||||||    
T  31569042 ttaattaaacatcaggattgtttgattgttggtgggtgaaagagagtggaatttta 31568987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 31639972 - 31639816
Alignment:
Q  19 aaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcat 118  Q
    ||||||||||| ||| ||||  | ||||||||||||||||||| |||||| || || |||||||||||||||||||||||||||||| |||||||||||     
T  31639972 aaaaagaagaataaaatcacacacttatatgcaatcgagtatggatgaaagatgttttgattcactctttaatcttccatagagattgattgaacatcag 31639873  T
Q  119 gattgcttgat-agctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    ||||| ||||| |  | |||| ||||||||| ||||||||||||| |||||| ||||    
T  31639872 gattgtttgatcattttgtggatgaaagagagtgaaattttagagtgacaatgaatg 31639816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 55 - 162
Target Start/End: Complemental strand, 40658701 - 40658594
Alignment:
Q  55 gagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaa 154  Q
    ||||||| |||||| ||||| |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| | | |||||||||||||| || ||    
T  40658701 gagtatggatgaaagatattttgattcactctttaatcttccatagagattgattgaacatcaggattgtttgatcgtttgtgggtgaaagagattggaa 40658602  T
Q  155 ttttagag 162  Q
    ||||||||    
T  40658601 ttttagag 40658594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 52 - 174
Target Start/End: Complemental strand, 45443067 - 45442942
Alignment:
Q  52 atcgagtatgaatgaaaaatattctgattcactctttaatcttccat---agagattaattgaacatcatgattgcttgatagctggtgggtgaaagaga 148  Q
    |||||||||| ||||||||| || |||||||||||||||||||||||   ||||||| ||||||||||| | ||| ||||| | |  |||||||||||||    
T  45443067 atcgagtatggatgaaaaatgttttgattcactctttaatcttccataacagagattgattgaacatcaggtttgtttgatcgtttctgggtgaaagaga 45442968  T
Q  149 atgaaattttagagcgacaataaatg 174  Q
     || | |||||||| |||||| ||||    
T  45442967 gtggagttttagagtgacaatgaatg 45442942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 44799325 - 44799396
Alignment:
Q  49 gcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccat---agagattaattgaacatca 117  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||   ||||||| |||||||||||    
T  44799325 gcaatcgaatatgaatgaaaaatattttgattcactctttaatcttccataacagagattgattgaacatca 44799396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 1482423 - 1482491
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  1482423 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 1482491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 1520775 - 1520843
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  1520775 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 1520843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 2390196 - 2390128
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  2390196 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 2390128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 3178797 - 3178865
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  3178797 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 3178865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 10639293 - 10639361
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  10639293 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 10639361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 13195716 - 13195648
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  13195716 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 13195648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 21658477 - 21658545
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  21658477 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 21658545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 27980467 - 27980399
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  27980467 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 27980399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 34202861 - 34202929
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  34202861 agaagaagaaattcacttacttatatccaattgagtatgtatgaaaaatattttgattcactctttaat 34202929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 37094620 - 37094688
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  37094620 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 37094688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 39697341 - 39697273
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  39697341 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 39697273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 40811251 - 40811183
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  40811251 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 40811183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 42343518 - 42343586
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  42343518 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 42343586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 43577489 - 43577557
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  43577489 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 43577557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 44143966 - 44144034
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  44143966 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 44144034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 35006299 - 35006380
Alignment:
Q  35 tcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatc 116  Q
    ||||||| |||||||||||||| |||  |||||| || || |||||||||||| ||||||| ||||||||| ||||||||||    
T  35006299 tcacttacttatatgcaatcgaatatagatgaaagatgttttgattcactcttcaatcttctatagagattgattgaacatc 35006380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 25852915 - 25852847
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| ||| || |||| ||||||| |||||||||||| ||||||||||||||||    
T  25852915 agaagaagaaattcacttacttacatccaattgagtatggatgaaaaatattttgattcactctttaat 25852847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 31568931 - 31568889
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  31568931 ctgggtgtaacaaaaaatatataggatgtgaatagaaaaactc 31568889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 28066997 - 28066929
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||  |||||||||||| ||||||| ||||||||    
T  28066997 agaagaagaaattcacttacttatatccaattgagtatagatgaaaaatattttgattcaatctttaat 28066929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 44456058 - 44456014
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactccg 287  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||    
T  44456058 ctgggtgtaaccagaaatatatagggtgtgaatagaaaaactccg 44456014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 4072605 - 4072564
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  4072605 tgggtgtaaccagaaatatatagggtgtgaatagaaaaactc 4072564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 45442872 - 45442831
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| |||||||||| ||||||||||||||||||||    
T  45442872 tgggtgtaaccagaaatatatgggatgtgaatagaaaaactc 45442831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 4330744 - 4330704
Alignment:
Q  245 gggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  4330744 gggtgtaaccagaaatatatagggtgtgaatagaaaaactc 4330704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 35896332 - 35896380
Alignment:
Q  43 ttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  35896332 ttatatccaattgagtatggatgaaaaatattttgattcactctttaat 35896380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 7721749 - 7721711
Alignment:
Q  247 gtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  7721749 gtgtaaccagaaatatataagatgtgaatagaaaaactc 7721711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 38628279 - 38628239
Alignment:
Q  245 gggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||||| ||||||||||| | |||||||||||||||||    
T  38628279 gggtgtaaccagaaatatatatggtgtgaatagaaaaactc 38628239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 115; Significance: 4e-58; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 110 - 280
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| |||    
T  110 aaaccatcgttattgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatataga 209  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||||| |||||| ||||    
T  210 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtgtaattttagagtgacaatgaatg 280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 365335 - 365179
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||||||||||||||||  ||||||| |||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  365335 aaaccagcgttattgaaaaagaagaaaaaattcgattatttagatgcaatcgagtatgaatgaaagatgttttgattcactctttaatcttccatagaga 365236  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagag 162  Q
    |||||||||||||   |||| ||||| | |||||||||||||||  |||||||||||||    
T  365235 ttaattgaacatcgaaattgtttgatcgttggtgggtgaaagag--tgaaattttagag 365179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 9288 - 9451
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    ||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||  | || ||||||||||||||||||| ||||||||    
T  9288 aaaccagcgttattgaaaaa-aagaaaaaattcacttgtttatatgcaatcgagtatgaatgaaag-tgttttgattcactctttaatctttcatagaga 9385  T
Q  104 ttaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaat 169  Q
    |||||||||||||| ||||| ||||| | |||||||||||||||| || ||||||| || ||||||    
T  9386 ttaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtggaattttaaagtgacaat 9451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 9525 - 9567
Alignment:
Q  243 ctgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||| |||||| ||||||||||||| |||||||||||||||||    
T  9525 ctggatgtaaccagaaatatatagggtgtgaatagaaaaactc 9567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 83; Significance: 6e-39; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 200482 - 200600
Alignment:
Q  4 aaaccagcgttgttgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagaga 103  Q
    |||||||| || |||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||||||||| |||    
T  200482 aaaccagcattattgaaaaagaagaaaaaaatcacttattcatatgcaatcgagtatgaatgaaagatatttttattcactctttaatcttccataaaga 200581  T
Q  104 ttaattgaacatcatgatt 122  Q
    |||||||||||||| ||||    
T  200582 ttaattgaacatcaggatt 200600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 156612 - 156544
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  156612 agaagaagaaattcacttacttatattcaattgagtatgtatgaaaaatattttgattcactctttaat 156544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 200772 - 200813
Alignment:
Q  244 tgggtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    |||||||||| | ||||||||||| |||||||||||||||||    
T  200772 tgggtgtaaccaaaaatatatagggtgtgaatagaaaaactc 200813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 60 - 174
Target Start/End: Original strand, 1 - 115
Alignment:
Q  60 tgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaatttta 159  Q
    ||||||||| || || |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||    
T  1 tgaatgaaagatgttttgattcactctttaatcttccatatagattaattgaacatcaggattgtttgatcgttggtgggtgaaagagagtgtaatttta 100  T
Q  160 gagcgacaataaatg 174  Q
    ||| |||||| ||||    
T  101 gagtgacaatgaatg 115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 3965 - 3866
Alignment:
Q  17 tgaaaaagaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaatcttccatagagattaattgaacatc 116  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||| | |||| ||||| ||||||||| |||||||||| ||||||||| ||||| ||||    
T  3965 tgaaaaagaagaagaaattcaattatttatatgcaatagagtatggacgaaagatattttgattcactttttaatcttctatagagattgattgaccatc 3866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 6997 - 6899
Alignment:
Q  76 tgattcactctttaatcttccatagagattaattgaacatcatgattgcttgatagctggtgggtgaaagagaatgaaattttagagcgacaataaatg 174  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | |||||| | ||||||  || |||||||||| |||||| ||||    
T  6997 tgattcactctttaatcttccatagagattaattgaacatcaggattgtttgatcgttggtggtttaaagagtgtgtaattttagagtgacaatgaatg 6899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 6826 - 6788
Alignment:
Q  247 gtgtaacaagaaatatataggatgtgaatagaaaaactc 285  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  6826 gtgtaaccagaaatatataggatgtgaatagaaaaactc 6788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 1632 - 1564
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| |||||||||||||||||||| ||||| ||||||||||    
T  1632 agaagaagaaattcacttacttatatccaattgagtatgaatgaaaaatattttgatttactctttaat 1564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 4569 - 4637
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  4569 agaagaagaaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 4637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 37601 - 37533
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  37601 agaagaataaattcacttacttatatccaattgagtatggatgaaaaatattttgattcactctttaat 37533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 14420 - 14488
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| ||||||  ||| ||||||| |||||||||||| ||||||||||||||||    
T  14420 agaagaagaaattcacttacttatatctaattgagtatgtatgaaaaatattttgattcactctttaat 14488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 41084 - 41152
Alignment:
Q  23 agaagaaaaaattcacttatttatatgcaatcgagtatgaatgaaaaatattctgattcactctttaat 91  Q
    ||||||| ||||||||||| |||||| |||| ||||||| |||||| ||||| ||||||||||||||||    
T  41084 agaagaagaaattcacttacttatatccaattgagtatggatgaaagatattttgattcactctttaat 41152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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