View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17241_low_26 (Length: 350)
Name: NF17241_low_26
Description: NF17241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17241_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 39190994 - 39191042
Alignment:
| Q |
287 |
tgcagcctaagaagttgaaatttgacaaaattggtgaagagaagagttt |
335 |
Q |
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| T |
39190994 |
tgcagcctaagaagttgaaatttgacaaaattggtgaagagaagagttt |
39191042 |
T |
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Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 56233047 - 56233095
Alignment:
| Q |
287 |
tgcagcctaagaagttgaaatttgacaaaattggtgaagagaagagttt |
335 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
56233047 |
tgcagcctaagaagttgaaatttgacaaaattggtgaagagaagagttt |
56233095 |
T |
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