View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17244_low_1 (Length: 506)

Name: NF17244_low_1
Description: NF17244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17244_low_1
NF17244_low_1
[»] chr5 (21 HSPs)
chr5 (186-488)||(24132579-24132903)
chr5 (20-122)||(24133093-24133195)
chr5 (127-184)||(20175228-20175285)
chr5 (127-188)||(35132519-35132580)
chr5 (127-185)||(35504368-35504426)
chr5 (127-187)||(10054480-10054540)
chr5 (127-187)||(19647786-19647846)
chr5 (127-185)||(10069969-10070027)
chr5 (127-188)||(13661805-13661866)
chr5 (148-189)||(21945010-21945051)
chr5 (128-184)||(2619686-2619742)
chr5 (127-187)||(8787337-8787397)
chr5 (127-182)||(11846075-11846130)
chr5 (127-185)||(9721735-9721793)
chr5 (127-185)||(11958095-11958153)
chr5 (127-185)||(12506296-12506354)
chr5 (131-189)||(13470147-13470205)
chr5 (127-189)||(19436964-19437026)
chr5 (127-185)||(21547522-21547579)
chr5 (127-185)||(34650961-34651018)
chr5 (127-187)||(4837256-4837315)
[»] chr1 (22 HSPs)
chr1 (127-189)||(18043158-18043220)
chr1 (127-188)||(51065876-51065937)
chr1 (127-186)||(29210412-29210471)
chr1 (127-186)||(29657770-29657829)
chr1 (127-185)||(5694321-5694379)
chr1 (127-187)||(28726033-28726094)
chr1 (127-187)||(9266856-9266916)
chr1 (127-187)||(42770118-42770178)
chr1 (127-187)||(43286720-43286780)
chr1 (127-190)||(17333410-17333472)
chr1 (127-197)||(29683183-29683254)
chr1 (127-185)||(24178591-24178649)
chr1 (127-185)||(38162850-38162908)
chr1 (127-185)||(38335170-38335227)
chr1 (127-189)||(47009989-47010051)
chr1 (127-184)||(19011124-19011180)
chr1 (124-185)||(28481844-28481905)
chr1 (127-188)||(51368913-51368974)
chr1 (128-188)||(12072191-12072251)
chr1 (127-187)||(14350405-14350465)
chr1 (127-187)||(15227737-15227797)
chr1 (127-191)||(30657602-30657666)
[»] chr2 (14 HSPs)
chr2 (124-187)||(38590999-38591062)
chr2 (127-191)||(26891791-26891855)
chr2 (127-189)||(561646-561708)
chr2 (127-187)||(27856524-27856584)
chr2 (127-185)||(44587902-44587960)
chr2 (124-185)||(31438646-31438707)
chr2 (127-187)||(30486208-30486268)
chr2 (127-187)||(31390010-31390070)
chr2 (127-185)||(20552931-20552989)
chr2 (147-181)||(35619082-35619116)
chr2 (147-181)||(35627087-35627121)
chr2 (127-188)||(2898069-2898129)
chr2 (127-188)||(29102411-29102471)
chr2 (127-187)||(32860100-32860160)
[»] chr7 (17 HSPs)
chr7 (127-185)||(43594164-43594222)
chr7 (124-188)||(7689325-7689389)
chr7 (127-187)||(34333282-34333342)
chr7 (127-185)||(34606261-34606319)
chr7 (127-187)||(20402387-20402448)
chr7 (127-187)||(12218564-12218624)
chr7 (127-187)||(18485959-18486019)
chr7 (147-179)||(38477875-38477907)
chr7 (127-186)||(5239284-5239343)
chr7 (127-182)||(11686452-11686507)
chr7 (127-182)||(28262034-28262089)
chr7 (127-186)||(37631670-37631729)
chr7 (127-189)||(29993615-29993677)
chr7 (127-184)||(28587911-28587967)
chr7 (127-187)||(32805536-32805597)
chr7 (127-191)||(4628560-4628624)
chr7 (127-187)||(5729344-5729404)
[»] chr8 (20 HSPs)
chr8 (127-188)||(168463-168524)
chr8 (127-187)||(4537872-4537932)
chr8 (127-187)||(27988627-27988687)
chr8 (127-187)||(28045929-28045989)
chr8 (127-183)||(20831681-20831737)
chr8 (127-186)||(11112638-11112697)
chr8 (127-185)||(30675700-30675758)
chr8 (127-187)||(4648193-4648252)
chr8 (127-187)||(9063180-9063239)
chr8 (148-179)||(9537830-9537861)
chr8 (127-185)||(2805388-2805446)
chr8 (127-185)||(34228682-34228740)
chr8 (127-185)||(37373206-37373263)
chr8 (127-188)||(13643009-13643070)
chr8 (127-188)||(13743434-13743495)
chr8 (127-183)||(14191102-14191159)
chr8 (127-184)||(21595848-21595904)
chr8 (127-187)||(9278210-9278270)
chr8 (127-187)||(16785085-16785144)
chr8 (127-187)||(33357257-33357317)
[»] chr4 (23 HSPs)
chr4 (127-188)||(52533913-52533974)
chr4 (127-187)||(43944505-43944565)
chr4 (127-188)||(15186240-15186301)
chr4 (127-187)||(33108801-33108860)
chr4 (127-186)||(18068007-18068066)
chr4 (127-190)||(29591184-29591247)
chr4 (127-189)||(789658-789720)
chr4 (127-185)||(32202608-32202666)
chr4 (127-185)||(32217045-32217103)
chr4 (148-189)||(47092590-47092631)
chr4 (127-186)||(10110129-10110189)
chr4 (127-187)||(43202511-43202571)
chr4 (127-186)||(4268950-4269009)
chr4 (127-190)||(7768933-7768996)
chr4 (127-185)||(24679770-24679827)
chr4 (127-185)||(28755621-28755678)
chr4 (127-189)||(47232000-47232062)
chr4 (127-185)||(54897308-54897366)
chr4 (148-186)||(55882683-55882721)
chr4 (148-189)||(22225895-22225936)
chr4 (127-187)||(12356242-12356302)
chr4 (127-187)||(16536046-16536106)
chr4 (148-180)||(28119911-28119943)
[»] chr3 (16 HSPs)
chr3 (124-189)||(46352630-46352695)
chr3 (127-185)||(4168183-4168241)
chr3 (127-188)||(52520678-52520739)
chr3 (127-187)||(11308338-11308398)
chr3 (127-186)||(272219-272278)
chr3 (127-186)||(41304004-41304063)
chr3 (127-186)||(49893330-49893389)
chr3 (127-185)||(20923992-20924050)
chr3 (127-185)||(39074419-39074477)
chr3 (127-185)||(43786871-43786929)
chr3 (127-185)||(23925280-23925338)
chr3 (127-185)||(48725271-48725329)
chr3 (127-185)||(52246582-52246640)
chr3 (147-179)||(3735195-3735227)
chr3 (127-187)||(40362708-40362768)
chr3 (127-187)||(52718166-52718225)
[»] chr6 (16 HSPs)
chr6 (127-188)||(12525716-12525777)
chr6 (127-187)||(4215693-4215753)
chr6 (127-187)||(23402136-23402196)
chr6 (127-186)||(27433491-27433550)
chr6 (127-185)||(392096-392154)
chr6 (127-188)||(3515763-3515824)
chr6 (127-188)||(32929636-32929697)
chr6 (127-187)||(20897946-20898006)
chr6 (127-187)||(34396655-34396715)
chr6 (114-185)||(29978233-29978303)
chr6 (127-185)||(34712253-34712312)
chr6 (127-185)||(21878475-21878533)
chr6 (127-185)||(35043890-35043948)
chr6 (127-187)||(1391306-1391365)
chr6 (127-183)||(2350654-2350710)
chr6 (127-187)||(7851287-7851347)
[»] scaffold0003 (1 HSPs)
scaffold0003 (127-186)||(53813-53872)
[»] scaffold0190 (1 HSPs)
scaffold0190 (127-185)||(14896-14954)
[»] scaffold0264 (1 HSPs)
scaffold0264 (127-187)||(22959-23019)
[»] scaffold0045 (1 HSPs)
scaffold0045 (127-185)||(50548-50606)
[»] scaffold0113 (1 HSPs)
scaffold0113 (128-175)||(41047-41095)
[»] scaffold0034 (1 HSPs)
scaffold0034 (127-187)||(95712-95772)
[»] scaffold0014 (1 HSPs)
scaffold0014 (127-187)||(68418-68478)
[»] scaffold0007 (1 HSPs)
scaffold0007 (129-185)||(233864-233920)


Alignment Details
Target: chr5 (Bit Score: 242; Significance: 1e-134; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 186 - 488
Target Start/End: Complemental strand, 24132903 - 24132579
Alignment:
Q  186 ttttatcttttgaaatactaattttgaatgtttaattttcaggccgattatgaattctctatatgaccccgcatttgaggctatgggtcttcccattgac 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24132903 ttttatcttttgaaatactaattttgaatgtttaattttcaggccgattatgaattctctatatgaccccgcatttgaggctatgggtcttcccattgac 24132804  T
Q  286 ccccatattagattgatgaaggcgttacaaggtaattacaatcaaattactccccgttaattttattaccacataattat-------------------- 365  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||                        
T  24132803 ccccatattagattgatgaaggcgttacaaggtaattacgatcaaattactccccgttaattttattaccacataattatttaatgatatatgcataatt 24132704  T
Q  366 --tttgtgttaaaagttgtgcactagtttagagattttaaggaaacaaaattaagtattttatatttacaagattattgttgtgtgaaatgcagataatt 463  Q
      || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24132703 atttagtgttaaaagttgtgcacaagtttagagattttaaggaaacaaaattaagtattttatatttacaagattattgttgtgtgaaatgcagataatt 24132604  T
Q  464 cagctagagattcatattacaaatt 488  Q
    |||||||||||||||||||||||||    
T  24132603 cagctagagattcatattacaaatt 24132579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 24133195 - 24133093
Alignment:
Q  20 gtagcaggtgcaaaagataggatggaagagaggaaccaaaacacttcaaaaaactcttctaaaccgaagtaattgtctttcaaacatcccaaaaacattc 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24133195 gtagcgggtgcaaaagataggatggaagagaggaaccaaaacacttcaaaaaactcttctaaaccgaagtaattgtctttcaaacatcccaaacacattc 24133096  T
Q  120 aat 122  Q
    |||    
T  24133095 aat 24133093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 20175285 - 20175228
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcc 184  Q
    ||||||||| ||||||||| | |||||||||||| |||||||||||||||||||||||    
T  20175285 tataatttctttttttatatttttaaccagtgtctcggagacaccggttagcatttcc 20175228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 35132580 - 35132519
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    ||||||||||||||| |||  ||||||||||||||||| | |||||||||||||||||||||    
T  35132580 tataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttcccttt 35132519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 35504368 - 35504426
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||  ||||||||||||||||| | ||||||||||||||||||    
T  35504368 tataatttcctttttcatacccttaaccagtgtcccgggggcaccggttagcatttccc 35504426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 10054480 - 10054540
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||||||||| ||||| | ||||||||||||||||||||    
T  10054480 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctt 10054540  T

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Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 19647786 - 19647846
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||||||||| |||||||| |||||||||||||| ||||    
T  19647786 tataatttcctttttcatatccttaaccagtgccccggagataccggttagcattttcctt 19647846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 10070027 - 10069969
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||  ||||||||||| ||||| | ||||||||||||||||||    
T  10070027 tataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccc 10069969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 13661866 - 13661805
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    ||||||||||||||| |||  |||||||||||  |||| | |||||||||||||||||||||    
T  13661866 tataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttcccttt 13661805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 21945010 - 21945051
Alignment:
Q  148 cttaaccagtgtcccggagacaccggttagcatttccctttt 189  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    
T  21945010 cttaaccagtgccccggaggcaccggttagcatttccctttt 21945051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 2619686 - 2619742
Alignment:
Q  128 ataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcc 184  Q
    ||||||| |||||| |||  |||||| ||||||||||||||||| ||||||||||||    
T  2619686 ataattttctttttcatatccttaacaagtgtcccggagacaccagttagcatttcc 2619742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 8787397 - 8787337
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||| ||||| |||  |||||||| || ||||| ||||||||||||||||||||||    
T  8787397 tataatttcatttttcatacccttaaccaatgccccggggacaccggttagcatttccctt 8787337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 11846130 - 11846075
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcattt 182  Q
    |||||||||||||||||||  |||| | |||||||||| ||||||| |||||||||    
T  11846130 tataatttccttttttatatccttagctagtgtcccggggacaccgcttagcattt 11846075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 9721735 - 9721793
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| ||| |||||||||||  ||||  ||||||||||| ||||||||    
T  9721735 tataatttcctttttcatattcttaaccagtagcccgaggacaccggttaacatttccc 9721793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 11958095 - 11958153
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    |||||||||||||||||||   |||||| ||| ||||| | ||||||||||||||||||    
T  11958095 tataatttccttttttatatctttaacctgtgccccgggggcaccggttagcatttccc 11958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 12506354 - 12506296
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| ||| ||||||| ||||  || ||| ||||||||||||||||||    
T  12506354 tataatttcctttttcatactcttaacgagtgctccagaggcaccggttagcatttccc 12506296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 13470205 - 13470147
Alignment:
Q  131 atttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctttt 189  Q
    ||||||||||| |||  ||||||||||| |||  || ||||||||||||||||||||||    
T  13470205 atttcctttttcatatccttaaccagtgccccataggcaccggttagcatttccctttt 13470147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 19436964 - 19437026
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctttt 189  Q
    ||||||||||||||| |||  |||||| |||||||| |||||| |||||| ||||| ||||||    
T  19436964 tataatttcctttttcatatccttaacgagtgtcccagagacatcggttaacattttcctttt 19437026  T

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Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 21547522 - 21547579
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    |||||||||||||||||||  |||||||  || ||||| ||||||||||||||||||||    
T  21547522 tataatttccttttttatatccttaaccgatg-cccggggacaccggttagcatttccc 21547579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 34650961 - 34651018
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||  ||||||||||| ||||| | ||||||||||||||||||    
T  34650961 tataatttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttccc 34651018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 4837315 - 4837256
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| ||| |||||||| ||| ||||| | ||||||||| ||||||||||    
T  4837315 tataatttcctttttcatattcttaaccggtgccccgg-ggcaccggttaacatttccctt 4837256  T

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Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 18043220 - 18043158
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctttt 189  Q
    |||||||||||||||||||  ||||||||||| ||||||| ||||||||||||||||||||||    
T  18043220 tataatttccttttttatacccttaaccagtgccccggaggcaccggttagcatttccctttt 18043158  T

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Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 51065876 - 51065937
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    |||||||| |||||| |||  ||||||||||||||||| |||||||||||||||||||||||    
T  51065876 tataatttactttttcatatccttaaccagtgtcccggggacaccggttagcatttcccttt 51065937  T

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Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 29210471 - 29210412
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccct 186  Q
    ||||||||||||||| |||  ||||||||||| ||||||| |||||||||||||||||||    
T  29210471 tataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttccct 29210412  T

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Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 29657829 - 29657770
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccct 186  Q
    |||||||||||||||||||  ||||||||||| ||||| | |||||||||||||||||||    
T  29657829 tataatttccttttttatatccttaaccagtgccccgggggcaccggttagcatttccct 29657770  T

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Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 5694379 - 5694321
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    |||||||||| ||||||||  ||||||||||| ||||||| ||||||||||||||||||    
T  5694379 tataatttccctttttatatccttaaccagtgccccggaggcaccggttagcatttccc 5694321  T

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Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 28726033 - 28726094
Alignment:
Q  127 tataatttccttttttatagtc-ttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||||||  || |||||||||| ||||| | ||||||||||||||||||||    
T  28726033 tataatttccttttttattatccttaaccagtgccccgggggcaccggttagcatttccctt 28726094  T

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Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 9266856 - 9266916
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||||||||| | ||| ||||||||||| ||||||||||    
T  9266856 tataatttcctttttcatatccttaaccagtgccgcggggacaccggttaacatttccctt 9266916  T

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Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 42770118 - 42770178
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||   |||||||||| ||||| | ||||||||||||||||||||    
T  42770118 tataatttcctttttcataccattaaccagtgccccgggggcaccggttagcatttccctt 42770178  T

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Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 43286780 - 43286720
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||||||||||||| | |||| |||||||||||| ||||    
T  43286780 tataatttcctttttcatatccttaaccagtgtcccagggacatcggttagcattttcctt 43286720  T

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Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 17333410 - 17333472
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctttta 190  Q
    ||||||||||||||| |||  ||||||||||| ||||| | |||||||||||||||||| ||||    
T  17333410 tataatttcctttttcatatccttaaccagtg-cccgggggcaccggttagcatttcccattta 17333472  T

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Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 29683254 - 29683183
Alignment:
Q  127 tataatttcctttttt-atagtcttaaccagtgtcccggagacaccggttagcatttcccttttatcttttg 197  Q
    |||||||||||||||| |||   |||||||||| ||||| | |||||||||||||||||||| ||| |||||    
T  29683254 tataatttcctttttttatatctttaaccagtgccccgggggcaccggttagcatttcccttgtattttttg 29683183  T

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Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 24178591 - 24178649
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||  ||||||||||| ||||| | || |||||||||||||||    
T  24178591 tataatttcctttttcatatccttaaccagtgccccgggggcatcggttagcatttccc 24178649  T

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Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 38162908 - 38162850
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    |||||||| |||||| |||  ||||||||||| ||||||| ||||||||| ||||||||    
T  38162908 tataattttctttttcatacccttaaccagtgccccggaggcaccggttaacatttccc 38162850  T

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Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 38335227 - 38335170
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||   ||||||||||||||  |||||||||||||||||||||    
T  38335227 tataatttcctttttcatatctttaaccagtgtccca-agacaccggttagcatttccc 38335170  T

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Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 47010051 - 47009989
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctttt 189  Q
    ||||||||||||||| |||  |||||||||||  |||||  ||||| ||||||||||||||||    
T  47010051 tataatttcctttttcatatccttaaccagtgctccggatgcaccgattagcatttccctttt 47009989  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 19011124 - 19011180
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcc 184  Q
    ||||||||||||||| |||  ||||||| ||| ||||| |||||||||||||||||||    
T  19011124 tataatttcctttttcatatccttaacccgtgccccgg-gacaccggttagcatttcc 19011180  T

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Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 28481905 - 28481844
Alignment:
Q  124 ctgtataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    |||||||||||||||||| |||  ||||||||| | ||  ||| ||||||||||||||||||    
T  28481905 ctgtataatttcctttttcatatccttaaccagggcccaagaggcaccggttagcatttccc 28481844  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 51368913 - 51368974
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    ||||||||||||||| |||  ||||||||||  || ||||  ||||||||||||||||||||    
T  51368913 tataatttcctttttcatacccttaaccagtaccctggaggtaccggttagcatttcccttt 51368974  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 12072191 - 12072251
Alignment:
Q  128 ataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    |||||||||||||| |||  ||||||| ||| ||||| | ||||||||||||||| |||||    
T  12072191 ataatttcctttttcatatccttaaccggtgccccgggggcaccggttagcattttccttt 12072251  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 14350405 - 14350465
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||||| |||  |||| | ||||||||||||||||||||    
T  14350405 tataatttcctttttcatacccttaaccggtgctccgggggcaccggttagcatttccctt 14350465  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 15227797 - 15227737
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||||||||| ||| | |  |||||||||||||||||||    
T  15227797 tataatttcctttttcatatccttaaccagtgcccccggggtaccggttagcatttccctt 15227737  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 30657666 - 30657602
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttttat 191  Q
    ||||||||| ||||| |||  |||||| |||| |||||   ||||||||||||||||||||||||    
T  30657666 tataatttcttttttcatatgcttaactagtgccccgggagcaccggttagcatttcccttttat 30657602  T

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Target: chr2 (Bit Score: 44; Significance: 8e-16; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 38590999 - 38591062
Alignment:
Q  124 ctgtataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    |||||||||||||||||| ||| |||||||||||| ||| | ||||||||||||||||||||||    
T  38590999 ctgtataatttcctttttcatattcttaaccagtgccccagggacaccggttagcatttccctt 38591062  T

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Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 26891791 - 26891855
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttttat 191  Q
    |||||||||||||||||||  ||||| ||||||||||| | ||||||||||||||||||| ||||    
T  26891791 tataatttccttttttatatccttaatcagtgtcccgggggcaccggttagcatttccctattat 26891855  T

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Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 561646 - 561708
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctttt 189  Q
    ||||||||||||||| |||  ||||||||||| ||||| | ||||||||||||||||||||||    
T  561646 tataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccctttt 561708  T

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Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 27856524 - 27856584
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| ||| |||||||||||| ||||| | ||||||||| ||||||||||    
T  27856524 tataatttcctttttcatactcttaaccagtgccccgggggcaccggttaacatttccctt 27856584  T

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Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 44587960 - 44587902
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    |||||||||||||||||||  ||||||| ||| ||||| | ||||||||||||||||||    
T  44587960 tataatttccttttttatatccttaaccggtgccccgggggcaccggttagcatttccc 44587902  T

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Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 31438707 - 31438646
Alignment:
Q  124 ctgtataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    |||||||||||||||||| |||  ||||||||||| |||||   ||||||||||||||||||    
T  31438707 ctgtataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttccc 31438646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 30486268 - 30486208
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||||||||| ||||| | |||| |||||||||||||||    
T  30486268 tataatttcctttttcatatccttaaccagtgccccgggggcaccagttagcatttccctt 30486208  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 31390070 - 31390010
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  |||||| |||| ||||||| |||| |||||||||||||||    
T  31390070 tataatttcctttttcatatccttaactagtgccccggaggcaccagttagcatttccctt 31390010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 20552989 - 20552931
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||  ||||||||||| ||| | | ||||||||||||||||||    
T  20552989 tataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 20552931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 181
Target Start/End: Original strand, 35619082 - 35619116
Alignment:
Q  147 tcttaaccagtgtcccggagacaccggttagcatt 181  Q
    |||||||||||||||||||||||||||||| ||||    
T  35619082 tcttaaccagtgtcccggagacaccggttaacatt 35619116  T

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Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 181
Target Start/End: Original strand, 35627087 - 35627121
Alignment:
Q  147 tcttaaccagtgtcccggagacaccggttagcatt 181  Q
    |||||||||||||||||||||||||||||| ||||    
T  35627087 tcttaaccagtgtcccggagacaccggttaacatt 35627121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 2898129 - 2898069
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    |||||||| |||||| |||  |||||||||||| |||| ||||||||||| |||||||||||    
T  2898129 tataattttctttttcatatccttaaccagtgttccgg-gacaccggttaacatttcccttt 2898069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 29102411 - 29102471
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    |||||||| |||||| ||| ||||||||| |||||||| || |||||| |||||||||||||    
T  29102411 tataattttctttttgatattcttaaccaatgtcccgg-gataccggtcagcatttcccttt 29102471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 32860160 - 32860100
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    |||||||||||||||||||  ||||||| ||| ||| | | ||||||||| ||||||||||    
T  32860160 tataatttccttttttatatccttaacccgtgcccccggggcaccggttaacatttccctt 32860100  T

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Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 43594164 - 43594222
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    |||||||||||||||||||  |||||||||||| |||| ||||||||||||||||||||    
T  43594164 tataatttccttttttatatccttaaccagtgttccggggacaccggttagcatttccc 43594222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 7689325 - 7689389
Alignment:
Q  124 ctgtataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    ||||| ||||||||||||||||  ||||| ||||||||| ||||||||||||| |||||||||||    
T  7689325 ctgtaaaatttccttttttatatccttaatcagtgtcccagagacaccggttaacatttcccttt 7689389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 34333342 - 34333282
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||||||||| ||||| | ||||||||||||||||||||    
T  34333342 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctt 34333282  T

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Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 34606319 - 34606261
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||  ||||||||||| ||||||| |||| |||||||||||||    
T  34606319 tataatttcctttttcatatccttaaccagtgccccggaggcaccagttagcatttccc 34606261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 20402448 - 20402387
Alignment:
Q  127 tataatttccttttttatagtc-ttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    |||||||||| |||||||  || ||||||| |||||||| ||||||||||||||||||||||    
T  20402448 tataatttccctttttattatccttaaccaatgtcccggggacaccggttagcatttccctt 20402387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 12218564 - 12218624
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  |||| |||||| ||||| | ||||||||||||||||||||    
T  12218564 tataatttcctttttcatatacttatccagtgccccgggggcaccggttagcatttccctt 12218624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 18486019 - 18485959
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||  |||  ||||||||||| ||||| | ||||||||||||||||||||    
T  18486019 tataatttccttttcaatatccttaaccagtgccccgggggcaccggttagcatttccctt 18485959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 38477907 - 38477875
Alignment:
Q  147 tcttaaccagtgtcccggagacaccggttagca 179  Q
    |||||||||||||||||||||||||||||||||    
T  38477907 tcttaaccagtgtcccggagacaccggttagca 38477875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 5239343 - 5239284
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccct 186  Q
    ||||||||||||||| |||   ||||||||||  |||||| |||||||||||||||||||    
T  5239343 tataatttcctttttcataccattaaccagtgctccggaggcaccggttagcatttccct 5239284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 11686452 - 11686507
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcattt 182  Q
    |||||||||||||||||||  |||||||||| |||||||  |||| ||||||||||    
T  11686452 tataatttccttttttatatccttaaccagtatcccggaagcaccagttagcattt 11686507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 28262089 - 28262034
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcattt 182  Q
    ||||||||||||||| |||  ||||||| ||| ||||||| |||||||||||||||    
T  28262089 tataatttcctttttcatatccttaaccggtgacccggaggcaccggttagcattt 28262034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 37631670 - 37631729
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccct 186  Q
    |||||||||||||||||||  ||||||| ||| ||||||  ||||||||| |||||||||    
T  37631670 tataatttccttttttatatccttaacccgtgccccggaagcaccggttaacatttccct 37631729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 29993615 - 29993677
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctttt 189  Q
    ||||||||||||||| |||  ||||||| ||| ||||| | |||| |||||||||||||||||    
T  29993615 tataatttcctttttcatatccttaaccggtgccccgggggcacccgttagcatttccctttt 29993677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 28587967 - 28587911
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcc 184  Q
    ||||||||||||||| |||  |||||||||||| |||| | |||||||||||||||||    
T  28587967 tataatttcctttttcatatccttaaccagtgt-ccgggggcaccggttagcatttcc 28587911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 32805597 - 32805536
Alignment:
Q  127 tataatttccttttttatagtc-ttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    |||||||||| |||||||  || |||||||||| |||||  |||||||||||||||||||||    
T  32805597 tataatttccctttttattatccttaaccagtgccccgggaacaccggttagcatttccctt 32805536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 4628624 - 4628560
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttttat 191  Q
    ||||||||||||||| |||  ||||||| ||| ||| | | || |||||||||||||||||||||    
T  4628624 tataatttcctttttcatatccttaaccggtgccccaggggcatcggttagcatttcccttttat 4628560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 5729404 - 5729344
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  |||||||||||  ||||  |||||||||| ||||||||||    
T  5729404 tataatttcctttttcatatccttaaccagtgctccgggaacaccggttaacatttccctt 5729344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 168524 - 168463
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    ||||||||||||||| |||  ||||||||||| ||||||| |||||||||||||||||||||    
T  168524 tataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttcccttt 168463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 4537872 - 4537932
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||| |||||||  ||||||||||| ||||||| ||||||||||||||||||||    
T  4537872 tataatttcctattttatatccttaaccagtgccccggaggcaccggttagcatttccctt 4537932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 27988627 - 27988687
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||||||||| ||||||| ||||||||||||||||||||    
T  27988627 tataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 27988687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 28045929 - 28045989
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||||||||| ||||||| ||||||||||||||||||||    
T  28045929 tataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 28045989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 20831681 - 20831737
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttc 183  Q
    ||||||||||||||| |||  ||||||||||||||||| | ||||||||||||||||    
T  20831681 tataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttc 20831737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 11112697 - 11112638
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccct 186  Q
    ||||||||||||||| |||  ||||||||||||||||||  |||| ||||||||||||||    
T  11112697 tataatttcctttttcatatccttaaccagtgtcccggatgcaccagttagcatttccct 11112638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 30675700 - 30675758
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||  ||||||||||| ||||| | ||||||||||||||||||    
T  30675700 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 30675758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 4648252 - 4648193
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||| ||||| ||||| ||||||||||||||||||||||    
T  4648252 tataatttcctttttcatatccttaatcagtgccccgg-gacaccggttagcatttccctt 4648193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 9063180 - 9063239
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  |||||||||||  |||| ||||||||||||||||||||||    
T  9063180 tataatttcctttttcatatccttaaccagtgctccgg-gacaccggttagcatttccctt 9063239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 179
Target Start/End: Complemental strand, 9537861 - 9537830
Alignment:
Q  148 cttaaccagtgtcccggagacaccggttagca 179  Q
    ||||||||||||||||||||||||||||||||    
T  9537861 cttaaccagtgtcccggagacaccggttagca 9537830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 2805388 - 2805446
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||  ||||||||||||||||| | ||| ||||| ||||||||    
T  2805388 tataatttcctttttcatatccttaaccagtgtcccgggggcactggttaacatttccc 2805446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 34228740 - 34228682
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||  ||||||||||| ||| | | ||||||||||||||||||    
T  34228740 tataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 34228682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 37373263 - 37373206
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||  |||||||||||| |||| | ||||||||||||||||||    
T  37373263 tataatttcctttttcatatccttaaccagtgt-ccgggggcaccggttagcatttccc 37373206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 13643070 - 13643009
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    |||||||||||||||  ||  ||||||||||| ||||| | ||||||||||||||| |||||    
T  13643070 tataatttcctttttcgtatccttaaccagtgccccgggggcaccggttagcattttccttt 13643009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 13743495 - 13743434
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    |||||||||||||||  ||  ||||||||||| ||||| | ||||||||||||||| |||||    
T  13743495 tataatttcctttttcgtatccttaaccagtgccccgggggcaccggttagcattttccttt 13743434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 14191102 - 14191159
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtccc-ggagacaccggttagcatttc 183  Q
    ||||||||||||||||||| |||||| |||||||||  | ||||||||||| ||||||    
T  14191102 tataatttccttttttatattcttaatcagtgtccctagggacaccggttaccatttc 14191159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 21595904 - 21595848
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcc 184  Q
    ||||||||||||||| |||  ||||||||||| ||||| | |||||||||||||||||    
T  21595904 tataatttcctttttcatacccttaaccagtg-cccgggggcaccggttagcatttcc 21595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 9278270 - 9278210
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||   ||||| |||||||| ||| |||| |||||||||||||||    
T  9278270 tataatttcctttttcatatctttaacgagtgtccctgaggcaccagttagcatttccctt 9278210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 16785144 - 16785085
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||| ||||| |||  ||||||||||| || |||| ||||||||||||||||||||    
T  16785144 tataatttcttttttcatatccttaaccagtgccctggag-caccggttagcatttccctt 16785085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 33357257 - 33357317
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  |||||||||||  |||| | |||| |||||||||||||||    
T  33357257 tataatttcctttttcatatccttaaccagtgctccgggggcaccagttagcatttccctt 33357317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 52533913 - 52533974
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    ||||||||||||||| ||| ||||||||||||||| |||| ||||||||| |||||||||||    
T  52533913 tataatttcctttttcatattcttaaccagtgtcctggaggcaccggttaacatttcccttt 52533974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 43944565 - 43944505
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||||||||| ||||||| ||||||||||||||||||||    
T  43944565 tataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttccctt 43944505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 15186301 - 15186240
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    ||||||||||||||| |||  ||||||||||| ||||| | |||||||||||||||||||||    
T  15186301 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttcccttt 15186240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 33108801 - 33108860
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| ||| |||||||||||| ||||||| ||||||||| ||||||||||    
T  33108801 tataatttcctttttcata-tcttaaccagtgccccggaggcaccggttaacatttccctt 33108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 18068007 - 18068066
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccct 186  Q
    ||||||||||||||| |||  ||||||||||| ||||| | |||||||||||||||||||    
T  18068007 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 18068066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 29591247 - 29591184
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctttta 190  Q
    |||||||||||| || ||| |||||||||||| ||||| | |||| ||||||||||||||||||    
T  29591247 tataatttccttattcatattcttaaccagtgccccgggggcaccagttagcatttccctttta 29591184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 789658 - 789720
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctttt 189  Q
    ||||||||||||||| |||  ||||||| ||| ||||| | ||||||||||||||||||||||    
T  789658 tataatttcctttttcatacccttaacccgtgccccgggggcaccggttagcatttccctttt 789720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 32202608 - 32202666
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    |||||||||||||||||||  ||||||| ||| ||||| ||||||||||| ||||||||    
T  32202608 tataatttccttttttatatccttaacccgtgccccggggacaccggttaacatttccc 32202666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 32217103 - 32217045
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    |||||||||||||||||||  ||||||||||| ||||| | |||| |||||||||||||    
T  32217103 tataatttccttttttatatccttaaccagtgccccgggggcaccagttagcatttccc 32217045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 47092631 - 47092590
Alignment:
Q  148 cttaaccagtgtcccggagacaccggttagcatttccctttt 189  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  47092631 cttaaccagtgtcccggaaacaccggttagcattttcctttt 47092590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 10110129 - 10110189
Alignment:
Q  127 tataatttccttttttatagtc-ttaaccagtgtcccggagacaccggttagcatttccct 186  Q
    |||||||||| |||||||  || |||| ||||||||||||| |||||||||||||||||||    
T  10110129 tataatttccctttttattatccttaatcagtgtcccggaggcaccggttagcatttccct 10110189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 43202511 - 43202571
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  |||||| |||| ||||| | ||||||||||||||||||||    
T  43202511 tataatttcctttttcatacccttaactagtgccccgggggcaccggttagcatttccctt 43202571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 4268950 - 4269009
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccct 186  Q
    |||| |||||||||| |||  ||||||||||| ||||| | |||||||||||||||||||    
T  4268950 tatagtttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 4269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 7768996 - 7768933
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctttta 190  Q
    ||||||||||||||| |||  ||||||||||| ||||| |  |||| |||||||||||||||||    
T  7768996 tataatttcctttttcatacccttaaccagtgccccgggggtaccgattagcatttccctttta 7768933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 24679770 - 24679827
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||| ||||| |||  ||||||||||| |||| |||||||||||||||||||||    
T  24679770 tataatttcttttttcatatccttaaccagtgccccg-agacaccggttagcatttccc 24679827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 28755678 - 28755621
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||  ||||||||||| || || ||||||||||||||||||||    
T  28755678 tataatttcctttttcatatccttaaccagtgccctgg-gacaccggttagcatttccc 28755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 47232000 - 47232062
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctttt 189  Q
    ||||||||||||||| | |  |||||||||||  |||| | ||||||||||||||||||||||    
T  47232000 tataatttcctttttcacatccttaaccagtgctccgggggcaccggttagcatttccctttt 47232062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 54897366 - 54897308
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||| | |||  ||||||||||| ||||| | ||||||||||||||||||    
T  54897366 tataatttcctttctcatatccttaaccagtgccccgggggcaccggttagcatttccc 54897308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 186
Target Start/End: Complemental strand, 55882721 - 55882683
Alignment:
Q  148 cttaaccagtgtcccggagacaccggttagcatttccct 186  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  55882721 cttaacgagtgccccggagacaccggttagcatttccct 55882683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 22225895 - 22225936
Alignment:
Q  148 cttaaccagtgtcccggagacaccggttagcatttccctttt 189  Q
    ||||||||||||||||| | |||||||||||||||| |||||    
T  22225895 cttaaccagtgtcccgggggcaccggttagcatttcgctttt 22225936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 12356302 - 12356242
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  |||||||||| || | | | ||||||||||||||||||||    
T  12356302 tataatttcctttttcatatccttaaccagtatctcaggggcaccggttagcatttccctt 12356242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 16536106 - 16536046
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||| | ||| ||||| | ||||||||||||||||||||    
T  16536106 tataatttcctttttcatacccttaatccgtgccccgggggcaccggttagcatttccctt 16536046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 28119943 - 28119911
Alignment:
Q  148 cttaaccagtgtcccggagacaccggttagcat 180  Q
    ||||||||||| |||||||||||||||||||||    
T  28119943 cttaaccagtgccccggagacaccggttagcat 28119911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 46352695 - 46352630
Alignment:
Q  124 ctgtataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctttt 189  Q
    |||||||||||||||||| |||  ||||||||||| ||||| | ||||||||||||||||||||||    
T  46352695 ctgtataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccctttt 46352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 4168241 - 4168183
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    |||||||||||||||||||  ||||||||||  ||||||| ||||||||||||||||||    
T  4168241 tataatttccttttttatatccttaaccagttccccggaggcaccggttagcatttccc 4168183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 52520739 - 52520678
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    ||||||||||||||| |||  ||||||||||| ||||| | |||||||||||||||||||||    
T  52520739 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttcccttt 52520678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 11308338 - 11308398
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| | |  ||||| |||||||||||| |||||||||||||||||||||    
T  11308338 tataatttcctttttcacatccttaatcagtgtcccggaaacaccggttagcatttccctt 11308398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 272278 - 272219
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccct 186  Q
    ||||||||||||||| |||  ||||||||||| ||||| | |||||||||||||||||||    
T  272278 tataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccct 272219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 41304063 - 41304004
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccct 186  Q
    ||||||||||||||| |||  |||||||| || ||||||| |||||||||||||||||||    
T  41304063 tataatttcctttttcatatccttaaccactgccccggaggcaccggttagcatttccct 41304004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 49893389 - 49893330
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccct 186  Q
    ||||||||||||||| |||  ||||||||||| ||||| | |||||||||||||||||||    
T  49893389 tataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccct 49893330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 20924050 - 20923992
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||  ||||||||||| ||||||  ||||||||||||||||||    
T  20924050 tataatttcctttttcatacccttaaccagtgccccggaagcaccggttagcatttccc 20923992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 39074477 - 39074419
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||  ||||||||||| ||||| | ||||||||||||||||||    
T  39074477 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 39074419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 43786929 - 43786871
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||   |||||||||| ||||||| ||||||||||||||||||    
T  43786929 tataatttcctttttcataccattaaccagtgccccggaggcaccggttagcatttccc 43786871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 23925338 - 23925280
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||||||| |||||||||||  ||||| |  ||| |||||||||||||    
T  23925338 tataatttccttttttatattcttaaccagttccccgggggtaccagttagcatttccc 23925280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 48725329 - 48725271
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||  ||||||||||| ||| | | ||||||||||||||||||    
T  48725329 tataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 48725271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 52246640 - 52246582
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||| ||||| |||  ||||||||||| ||||||| |||| |||||||||||||    
T  52246640 tataatttcatttttcatatccttaaccagtgccccggaggcaccagttagcatttccc 52246582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 3735227 - 3735195
Alignment:
Q  147 tcttaaccagtgtcccggagacaccggttagca 179  Q
    |||||||||||||||||||| ||||||||||||    
T  3735227 tcttaaccagtgtcccggaggcaccggttagca 3735195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 40362708 - 40362768
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||| ||||| |||  ||||| ||||| ||||||| ||| ||||||||||||||||    
T  40362708 tataatttcttttttcatatccttaatcagtgccccggaggcacgggttagcatttccctt 40362768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 52718225 - 52718166
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  |||||||||||||| |||| ||||| |||| |||||||||    
T  52718225 tataatttcctttttcatatccttaaccagtgtccgggag-caccgattagtatttccctt 52718166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 12525777 - 12525716
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    ||||||||||||||| |||  ||||||||||  ||||||| |||||||||||||||||||||    
T  12525777 tataatttcctttttcatacccttaaccagtaccccggaggcaccggttagcatttcccttt 12525716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 4215753 - 4215693
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| ||| |||||||||||| ||||| | ||||||||| ||||||||||    
T  4215753 tataatttcctttttcatactcttaaccagtgccccgggggcaccggttaacatttccctt 4215693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 23402196 - 23402136
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||||||||| ||||||| |||| |||||||||||||||    
T  23402196 tataatttcctttttcatatccttaaccagtgccccggaggcaccagttagcatttccctt 23402136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 27433550 - 27433491
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccct 186  Q
    ||||||||||||||| |||  ||||||||||| ||||| | |||||||||||||||||||    
T  27433550 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 27433491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 392154 - 392096
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||  ||||||||||| ||||| | ||||||||||||||||||    
T  392154 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 392096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 3515824 - 3515763
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    ||||||||||||||| |||  ||||||||||| || || | |||||||||||||||||||||    
T  3515824 tataatttcctttttcatacccttaaccagtgccctgggggcaccggttagcatttcccttt 3515763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 32929636 - 32929697
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttcccttt 188  Q
    ||||||||||||||| |||  |||||||| || ||||| | |||||||||||||||||||||    
T  32929636 tataatttcctttttcatacccttaaccattgccccgggggcaccggttagcatttcccttt 32929697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 20898006 - 20897946
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||||||||| || || | ||||||||||||||||||||    
T  20898006 tataatttcctttttcatatccttaaccagtgccctgggggcaccggttagcatttccctt 20897946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 34396655 - 34396715
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||||| |||||| || | ||||||||||||||||||||    
T  34396655 tataatttcctttttcatatccttaacctgtgtcctgggggcaccggttagcatttccctt 34396715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 185
Target Start/End: Complemental strand, 29978303 - 29978233
Alignment:
Q  114 acattcaattctgtataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||| ||| || ||||||||||||||| |||  |||||| ||||||| |||| ||||||||||||||||||    
T  29978303 acattaaatactatataatttcctttttcatatccttaactagtgtcc-ggaggcaccggttagcatttccc 29978233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 34712253 - 34712312
Alignment:
Q  127 tataatttccttttttatagtc-ttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    |||||||||| |||||||  || |||||||||| ||||||| ||||||||||||||||||    
T  34712253 tataatttccctttttattatccttaaccagtgccccggaggcaccggttagcatttccc 34712312  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 21878475 - 21878533
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||  ||||||| ||| || |||| ||||||||||||||||||    
T  21878475 tataatttcctttttcatatccttaacccgtgcccgggaggcaccggttagcatttccc 21878533  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 35043948 - 35043890
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||| ||||| |||  ||||||||||||||||  |||||| |||||||||||||    
T  35043948 tataatttcttttttcatatccttaaccagtgtcccgtggacaccagttagcatttccc 35043890  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 1391306 - 1391365
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  ||||| ||||  ||||||| ||||||||||||||||||||    
T  1391306 tataatttcctttttcatatccttaatcagtaccccggag-caccggttagcatttccctt 1391365  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 2350710 - 2350654
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttc 183  Q
    ||||||||||||||| |||  ||||||||||| |||||   ||||||||||||||||    
T  2350710 tataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttc 2350654  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 7851287 - 7851347
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    |||||||| |||||| |||  ||||||||||| || || | ||||||||||||||||||||    
T  7851287 tataattttctttttcatatccttaaccagtgccctgggggcaccggttagcatttccctt 7851347  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 53813 - 53872
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccct 186  Q
    ||||||||||||||| |||  ||||||||||| ||||| | |||||||||||||||||||    
T  53813 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 53872  T

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Target: scaffold0190 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 14954 - 14896
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||| |||||||||   |||||||||| ||||| ||||||||||||||||||||    
T  14954 tataatttctttttttatatctttaaccagtgccccggggacaccggttagcatttccc 14896  T

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Target: scaffold0264 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 23019 - 22959
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| |||  |||||||||||  |||| | ||||||||||||||||||||    
T  23019 tataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttccctt 22959  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 50606 - 50548
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||||| |||   |||||||||| ||||||| ||||||||| ||||||||    
T  50606 tataatttcctttttcatatctttaaccagtgccccggaggcaccggttaacatttccc 50548  T

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Target: scaffold0113 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 41047 - 41095
Alignment:
Q  128 ataatttcctttttt-atagtcttaaccagtgtcccggagacaccggtt 175  Q
    ||||||||||||| | |||  ||||||||||||||||||||||||||||    
T  41047 ataatttccttttatgatatgcttaaccagtgtcccggagacaccggtt 41095  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 95712 - 95772
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||||||||| ||| |||||||||||  | ||| | ||||||||||||||| ||||    
T  95712 tataatttcctttttcatattcttaaccagtacctcgggggcaccggttagcattttcctt 95772  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 68418 - 68478
Alignment:
Q  127 tataatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccctt 187  Q
    ||||||||| ||||| |||  ||||||||||| ||||| | |||| |||||||||||||||    
T  68418 tataatttcatttttcatatccttaaccagtgccccgggggcaccagttagcatttccctt 68478  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 233920 - 233864
Alignment:
Q  129 taatttccttttttatagtcttaaccagtgtcccggagacaccggttagcatttccc 185  Q
    ||||||||||||| |||   ||||||| |||||||||||||||| || |||||||||    
T  233920 taatttcctttttcatatctttaaccaatgtcccggagacaccgattcgcatttccc 233864  T

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