View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17245_high_4 (Length: 399)

Name: NF17245_high_4
Description: NF17245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17245_high_4
NF17245_high_4
[»] chr1 (37 HSPs)
chr1 (10-382)||(7635627-7636000)
chr1 (14-314)||(16056638-16056941)
chr1 (14-360)||(16062003-16062353)
chr1 (13-193)||(27355648-27355827)
chr1 (10-245)||(16055472-16055710)
chr1 (14-232)||(16060886-16061107)
chr1 (10-283)||(34065028-34065304)
chr1 (10-193)||(13430918-13431101)
chr1 (13-361)||(11666784-11667140)
chr1 (13-232)||(21434394-21434615)
chr1 (48-193)||(27331738-27331882)
chr1 (7-351)||(29643022-29643366)
chr1 (7-189)||(1950420-1950600)
chr1 (15-331)||(37183684-37184000)
chr1 (10-204)||(45941398-45941590)
chr1 (10-193)||(49498458-49498639)
chr1 (10-204)||(21107241-21107433)
chr1 (10-189)||(23021888-23022065)
chr1 (10-328)||(28111038-28111357)
chr1 (10-204)||(21018417-21018609)
chr1 (10-204)||(21111108-21111300)
chr1 (193-283)||(27355173-27355262)
chr1 (10-317)||(20398835-20399143)
chr1 (42-283)||(30938431-30938672)
chr1 (15-328)||(45960568-45960881)
chr1 (252-360)||(16060465-16060574)
chr1 (286-378)||(27331549-27331640)
chr1 (10-174)||(34732340-34732502)
chr1 (10-193)||(2794209-2794390)
chr1 (230-320)||(13430155-13430246)
chr1 (15-334)||(3796644-3796963)
chr1 (210-378)||(50196723-50196889)
chr1 (211-323)||(27536359-27536471)
chr1 (15-192)||(31204825-31205000)
chr1 (10-204)||(41058252-41058444)
chr1 (10-83)||(49853147-49853220)
chr1 (63-204)||(21114448-21114587)
[»] chr3 (73 HSPs)
chr3 (10-377)||(22993460-22993827)
chr3 (10-380)||(18542616-18542989)
chr3 (10-339)||(17545921-17546257)
chr3 (7-189)||(10884919-10885099)
chr3 (15-351)||(47051566-47051903)
chr3 (10-190)||(18641723-18641901)
chr3 (10-190)||(18644719-18644897)
chr3 (10-193)||(28008019-28008200)
chr3 (10-192)||(30219954-30220134)
chr3 (10-190)||(35412575-35412753)
chr3 (10-156)||(3292943-3293088)
chr3 (7-140)||(282191-282323)
chr3 (10-232)||(52199978-52200200)
chr3 (10-377)||(7486636-7487002)
chr3 (10-328)||(54723807-54724126)
chr3 (10-204)||(2775547-2775739)
chr3 (10-204)||(2778790-2778982)
chr3 (10-204)||(16243938-16244130)
chr3 (10-204)||(45896446-45896638)
chr3 (15-356)||(47054996-47055338)
chr3 (10-193)||(2873629-2873810)
chr3 (15-190)||(10106551-10106723)
chr3 (10-193)||(24125564-24125745)
chr3 (10-193)||(24128841-24129022)
chr3 (10-193)||(30690801-30690982)
chr3 (10-193)||(53815893-53816074)
chr3 (10-328)||(538892-539211)
chr3 (10-204)||(25584742-25584934)
chr3 (10-204)||(29343811-29344003)
chr3 (10-192)||(43809645-43809825)
chr3 (10-204)||(43926900-43927092)
chr3 (15-328)||(50461359-50461672)
chr3 (18-231)||(55031904-55032121)
chr3 (10-193)||(32287271-32287452)
chr3 (10-192)||(16184636-16184816)
chr3 (10-204)||(20728584-20728776)
chr3 (17-193)||(23298563-23298737)
chr3 (10-190)||(54461080-54461258)
chr3 (23-231)||(55034764-55034976)
chr3 (222-361)||(2279410-2279547)
chr3 (10-193)||(6434726-6434907)
chr3 (10-201)||(8461427-8461616)
chr3 (10-204)||(31549237-31549429)
chr3 (10-190)||(19304640-19304818)
chr3 (10-202)||(35751506-35751696)
chr3 (15-193)||(11784836-11785012)
chr3 (13-204)||(22783669-22783859)
chr3 (13-204)||(22788033-22788223)
chr3 (10-204)||(49742856-49743048)
chr3 (10-232)||(19301413-19301634)
chr3 (225-382)||(30157801-30157956)
chr3 (222-338)||(10963595-10963710)
chr3 (222-338)||(10967104-10967219)
chr3 (210-377)||(18883400-18883565)
chr3 (210-377)||(54735979-54736143)
chr3 (226-377)||(2784311-2784459)
chr3 (10-125)||(17040037-17040151)
chr3 (10-204)||(10881545-10881737)
chr3 (15-193)||(11190597-11190773)
chr3 (15-193)||(12561182-12561358)
chr3 (51-193)||(17141514-17141654)
chr3 (210-377)||(4250574-4250738)
chr3 (15-192)||(46885011-46885185)
chr3 (15-112)||(48064063-48064159)
chr3 (222-338)||(10960088-10960203)
chr3 (15-83)||(22416890-22416958)
chr3 (17-193)||(25442807-25442981)
chr3 (15-83)||(32367185-32367253)
chr3 (15-191)||(54720041-54720215)
chr3 (303-377)||(10885224-10885298)
chr3 (15-193)||(17531604-17531780)
chr3 (247-377)||(42354178-42354306)
chr3 (49-193)||(28266021-28266163)
[»] chr6 (43 HSPs)
chr6 (10-382)||(13021022-13021396)
chr6 (10-378)||(11192356-11192720)
chr6 (10-266)||(12988013-12988267)
chr6 (7-240)||(9839308-9839539)
chr6 (10-192)||(2846285-2846466)
chr6 (10-377)||(23008043-23008408)
chr6 (10-377)||(23779956-23780321)
chr6 (15-193)||(26942396-26942572)
chr6 (10-116)||(28848823-28848929)
chr6 (10-361)||(11247744-11248104)
chr6 (10-193)||(3596742-3596923)
chr6 (10-193)||(23384713-23384894)
chr6 (10-328)||(9953945-9954263)
chr6 (10-156)||(20185726-20185870)
chr6 (10-156)||(22150121-22150265)
chr6 (10-193)||(2379212-2379393)
chr6 (10-193)||(6513238-6513419)
chr6 (10-323)||(1125563-1125877)
chr6 (10-156)||(5738082-5738226)
chr6 (10-204)||(17106560-17106752)
chr6 (10-204)||(30655426-30655618)
chr6 (221-377)||(14966417-14966570)
chr6 (10-193)||(13005171-13005352)
chr6 (10-193)||(14281481-14281662)
chr6 (10-193)||(22561124-22561305)
chr6 (228-377)||(3826598-3826744)
chr6 (51-116)||(5259957-5260021)
chr6 (160-382)||(24371348-24371570)
chr6 (10-193)||(11402239-11402420)
chr6 (210-377)||(34502529-34502692)
chr6 (325-382)||(12979903-12979960)
chr6 (13-64)||(24371260-24371311)
chr6 (10-204)||(10289954-10290146)
chr6 (15-112)||(7128286-7128382)
chr6 (242-338)||(5260023-5260119)
chr6 (305-377)||(5617985-5618055)
chr6 (221-377)||(14969897-14970050)
chr6 (15-175)||(19475989-19476147)
chr6 (209-332)||(5737881-5738003)
chr6 (303-377)||(10290260-10290334)
chr6 (10-81)||(28111837-28111908)
chr6 (15-81)||(28230581-28230647)
chr6 (15-83)||(24410285-24410353)
[»] chr5 (43 HSPs)
chr5 (10-378)||(21915102-21915472)
chr5 (10-356)||(31575395-31575744)
chr5 (10-190)||(22936901-22937079)
chr5 (15-377)||(7625088-7625452)
chr5 (10-232)||(42062902-42063125)
chr5 (10-190)||(21335662-21335840)
chr5 (10-204)||(41876714-41876906)
chr5 (10-193)||(21332641-21332822)
chr5 (10-204)||(34831744-34831936)
chr5 (210-377)||(2453469-2453633)
chr5 (10-175)||(18239474-18239638)
chr5 (10-193)||(26752662-26752843)
chr5 (10-193)||(31863695-31863876)
chr5 (10-193)||(37215025-37215205)
chr5 (15-204)||(4099467-4099654)
chr5 (225-377)||(3195283-3195432)
chr5 (210-377)||(19686356-19686521)
chr5 (10-193)||(18952673-18952854)
chr5 (10-193)||(20055754-20055935)
chr5 (23-332)||(14015958-14016267)
chr5 (10-191)||(17664532-17664710)
chr5 (228-377)||(30764430-30764576)
chr5 (228-377)||(34652535-34652681)
chr5 (10-175)||(41306506-41306669)
chr5 (10-204)||(7270996-7271188)
chr5 (15-193)||(12058453-12058629)
chr5 (228-374)||(30761611-30761754)
chr5 (15-193)||(34132944-34133120)
chr5 (15-193)||(34143175-34143351)
chr5 (7-140)||(18765654-18765787)
chr5 (210-377)||(19689739-19689904)
chr5 (7-191)||(40583226-40583408)
chr5 (10-85)||(2837284-2837359)
chr5 (23-202)||(22131223-22131400)
chr5 (18-193)||(23044130-23044303)
chr5 (15-193)||(12087943-12088119)
chr5 (269-372)||(10629453-10629555)
chr5 (10-193)||(26895565-26895746)
chr5 (226-377)||(28562140-28562288)
chr5 (226-377)||(28565708-28565856)
chr5 (15-193)||(26907416-26907592)
chr5 (15-112)||(17748425-17748521)
chr5 (18-175)||(33552109-33552264)
[»] chr4 (63 HSPs)
chr4 (10-378)||(37739534-37739901)
chr4 (7-283)||(22172242-22172519)
chr4 (231-377)||(48013163-48013311)
chr4 (15-377)||(33926957-33927319)
chr4 (10-113)||(5677448-5677551)
chr4 (15-351)||(15404882-15405218)
chr4 (10-338)||(53094487-53094818)
chr4 (10-328)||(34319740-34320059)
chr4 (10-192)||(8877462-8877643)
chr4 (10-192)||(33408279-33408459)
chr4 (10-377)||(56195507-56195875)
chr4 (10-190)||(18911478-18911656)
chr4 (10-328)||(44808778-44809097)
chr4 (15-190)||(5706376-5706550)
chr4 (10-190)||(12238245-12238423)
chr4 (10-193)||(40616769-40616950)
chr4 (10-140)||(8874774-8874903)
chr4 (10-204)||(19820707-19820899)
chr4 (7-189)||(37103181-37103361)
chr4 (10-204)||(52006481-52006673)
chr4 (10-116)||(33493729-33493837)
chr4 (10-317)||(34017617-34017923)
chr4 (10-201)||(3797761-3797950)
chr4 (10-201)||(5681407-5681596)
chr4 (10-204)||(40903033-40903225)
chr4 (10-377)||(56198833-56199202)
chr4 (10-328)||(15432058-15432380)
chr4 (210-377)||(10386120-10386284)
chr4 (222-377)||(18859966-18860118)
chr4 (10-193)||(19859483-19859664)
chr4 (10-193)||(24150652-24150833)
chr4 (10-193)||(39501628-39501809)
chr4 (10-193)||(52530896-52531077)
chr4 (59-193)||(48014027-48014161)
chr4 (10-191)||(27014243-27014422)
chr4 (222-377)||(17670500-17670652)
chr4 (10-377)||(15811909-15812279)
chr4 (10-204)||(24044091-24044283)
chr4 (15-328)||(29324810-29325122)
chr4 (15-193)||(48637490-48637666)
chr4 (10-83)||(12782884-12782957)
chr4 (10-150)||(27677059-27677197)
chr4 (10-193)||(5670557-5670738)
chr4 (10-193)||(5672875-5673056)
chr4 (10-81)||(44164762-44164833)
chr4 (210-282)||(19929069-19929140)
chr4 (10-81)||(15446807-15446878)
chr4 (15-193)||(11195660-11195836)
chr4 (15-193)||(18673043-18673219)
chr4 (10-204)||(38283439-38283631)
chr4 (67-193)||(39498346-39498470)
chr4 (10-204)||(40794982-40795174)
chr4 (10-83)||(3719103-3719176)
chr4 (10-91)||(46955539-46955620)
chr4 (10-204)||(48415475-48415671)
chr4 (230-322)||(19864225-19864317)
chr4 (17-83)||(25962045-25962111)
chr4 (15-81)||(35509949-35510015)
chr4 (15-193)||(53009519-53009695)
chr4 (305-377)||(10248096-10248166)
chr4 (16-204)||(15429806-15429992)
chr4 (16-204)||(15436420-15436606)
chr4 (185-213)||(48013955-48013983)
[»] chr2 (51 HSPs)
chr2 (10-338)||(34682661-34682988)
chr2 (15-351)||(45457129-45457466)
chr2 (10-377)||(31427315-31427684)
chr2 (10-328)||(24235058-24235381)
chr2 (15-351)||(45453841-45454178)
chr2 (10-136)||(35521378-35521504)
chr2 (10-334)||(9185242-9185567)
chr2 (10-232)||(26365896-26366119)
chr2 (10-232)||(5105689-5105911)
chr2 (10-328)||(24238330-24238653)
chr2 (10-232)||(25820767-25820989)
chr2 (10-317)||(25959524-25959831)
chr2 (15-328)||(33310634-33310947)
chr2 (10-377)||(36808217-36808585)
chr2 (10-193)||(8888598-8888779)
chr2 (10-332)||(29440457-29440780)
chr2 (10-204)||(31585891-31586083)
chr2 (10-204)||(40781434-40781626)
chr2 (15-334)||(38015486-38015805)
chr2 (10-193)||(22021030-22021211)
chr2 (10-328)||(37279500-37279819)
chr2 (10-191)||(30274732-30274911)
chr2 (27-204)||(30926520-30926695)
chr2 (10-317)||(9188487-9188795)
chr2 (10-193)||(9966331-9966512)
chr2 (15-193)||(22630808-22630984)
chr2 (10-232)||(25138851-25139074)
chr2 (10-156)||(42368710-42368854)
chr2 (10-191)||(43207854-43208032)
chr2 (10-150)||(45493161-45493299)
chr2 (10-150)||(45500903-45501041)
chr2 (18-125)||(10600885-10600991)
chr2 (10-125)||(16179089-16179203)
chr2 (210-283)||(4578016-4578089)
chr2 (10-204)||(43723662-43723854)
chr2 (225-377)||(13518493-13518642)
chr2 (222-382)||(3252508-3252663)
chr2 (15-193)||(1386384-1386560)
chr2 (10-204)||(5666480-5666671)
chr2 (10-204)||(13971845-13972037)
chr2 (15-204)||(6826739-6826925)
chr2 (10-113)||(27266751-27266853)
chr2 (15-121)||(3875253-3875358)
chr2 (225-283)||(11056531-11056588)
chr2 (51-193)||(12219799-12219939)
chr2 (14-156)||(17874586-17874726)
chr2 (268-377)||(1503200-1503307)
chr2 (268-377)||(1506404-1506511)
chr2 (228-361)||(11059992-11060123)
chr2 (15-83)||(16790827-16790895)
chr2 (303-382)||(43723966-43724045)
[»] scaffold0233 (1 HSPs)
scaffold0233 (13-378)||(9922-10288)
[»] chr7 (40 HSPs)
chr7 (10-382)||(5796519-5796890)
chr7 (7-220)||(18562468-18562683)
chr7 (10-328)||(16165716-16166035)
chr7 (10-232)||(48645441-48645663)
chr7 (10-193)||(5242116-5242298)
chr7 (10-361)||(7227495-7227854)
chr7 (42-204)||(13809472-13809632)
chr7 (271-377)||(18559989-18560095)
chr7 (10-204)||(20594230-20594422)
chr7 (294-377)||(18560827-18560910)
chr7 (10-193)||(45290446-45290627)
chr7 (211-377)||(11397829-11397994)
chr7 (10-193)||(23224871-23225052)
chr7 (10-193)||(45287035-45287216)
chr7 (10-140)||(4546836-4546964)
chr7 (210-377)||(26153339-26153504)
chr7 (222-377)||(5826487-5826639)
chr7 (222-377)||(11825134-11825286)
chr7 (10-193)||(13842607-13842788)
chr7 (10-204)||(11919820-11920012)
chr7 (10-204)||(17730781-17730973)
chr7 (10-204)||(26557466-26557658)
chr7 (10-232)||(2441202-2441425)
chr7 (10-204)||(4542764-4542956)
chr7 (15-328)||(6603431-6603744)
chr7 (10-204)||(8276953-8277145)
chr7 (15-113)||(9864771-9864868)
chr7 (56-189)||(4695494-4695625)
chr7 (225-377)||(8398021-8398170)
chr7 (15-191)||(14683412-14683586)
chr7 (15-193)||(9132727-9132902)
chr7 (10-192)||(13449743-13449923)
chr7 (10-193)||(37415389-37415572)
chr7 (10-204)||(4595964-4596156)
chr7 (10-156)||(9271468-9271612)
chr7 (15-193)||(10469116-10469292)
chr7 (210-361)||(8258073-8258223)
chr7 (247-377)||(22232405-22232533)
chr7 (247-377)||(22254206-22254334)
chr7 (15-83)||(3068051-3068119)
[»] scaffold0002 (2 HSPs)
scaffold0002 (10-377)||(118222-118587)
scaffold0002 (75-377)||(99008-99312)
[»] chr8 (38 HSPs)
chr8 (10-201)||(4868230-4868420)
chr8 (10-377)||(33883123-33883492)
chr8 (15-328)||(16953759-16954072)
chr8 (10-377)||(45155041-45155411)
chr8 (21-193)||(30784907-30785078)
chr8 (15-338)||(36710450-36710773)
chr8 (75-377)||(14589396-14589698)
chr8 (10-193)||(12516413-12516595)
chr8 (15-328)||(18824218-18824531)
chr8 (10-283)||(25591347-25591621)
chr8 (10-191)||(25594620-25594799)
chr8 (10-190)||(43681834-43682012)
chr8 (15-192)||(18825849-18826024)
chr8 (210-377)||(30645660-30645825)
chr8 (10-193)||(17930958-17931139)
chr8 (10-189)||(18721246-18721423)
chr8 (15-193)||(10498175-10498351)
chr8 (10-210)||(5980258-5980455)
chr8 (210-377)||(31981535-31981700)
chr8 (210-377)||(31986462-31986627)
chr8 (222-377)||(5964444-5964596)
chr8 (10-204)||(12582985-12583180)
chr8 (10-125)||(23643797-23643911)
chr8 (13-204)||(5613668-5613858)
chr8 (15-193)||(25231063-25231239)
chr8 (15-193)||(33419638-33419814)
chr8 (224-377)||(14188361-14188511)
chr8 (10-91)||(22173984-22174065)
chr8 (10-193)||(14421722-14421904)
chr8 (10-193)||(10663876-10664057)
chr8 (10-156)||(21279767-21279911)
chr8 (222-361)||(20262743-20262880)
chr8 (222-361)||(21049373-21049510)
chr8 (10-193)||(38248360-38248541)
chr8 (10-150)||(2560530-2560668)
chr8 (242-338)||(37681333-37681430)
chr8 (15-83)||(31284656-31284724)
chr8 (15-83)||(44027162-44027230)
[»] scaffold0034 (1 HSPs)
scaffold0034 (10-378)||(48181-48545)
[»] scaffold0045 (1 HSPs)
scaffold0045 (15-377)||(89755-90118)
[»] scaffold0962 (1 HSPs)
scaffold0962 (10-190)||(3246-3424)
[»] scaffold0412 (1 HSPs)
scaffold0412 (10-328)||(111-431)
[»] scaffold0035 (1 HSPs)
scaffold0035 (10-232)||(62497-62717)
[»] scaffold0005 (1 HSPs)
scaffold0005 (10-193)||(293003-293184)
[»] scaffold0015 (1 HSPs)
scaffold0015 (10-204)||(198127-198319)
[»] scaffold0427 (1 HSPs)
scaffold0427 (10-193)||(3749-3930)
[»] scaffold0757 (1 HSPs)
scaffold0757 (10-204)||(5332-5524)
[»] scaffold0690 (1 HSPs)
scaffold0690 (67-283)||(7579-7797)
[»] scaffold0250 (1 HSPs)
scaffold0250 (15-328)||(19381-19696)
[»] scaffold1063 (1 HSPs)
scaffold1063 (10-190)||(2475-2659)
[»] scaffold0381 (1 HSPs)
scaffold0381 (10-191)||(5361-5540)
[»] scaffold0334 (1 HSPs)
scaffold0334 (10-116)||(19329-19434)
[»] scaffold0080 (1 HSPs)
scaffold0080 (10-204)||(27089-27281)
[»] scaffold0014 (2 HSPs)
scaffold0014 (210-377)||(223894-224059)
scaffold0014 (210-377)||(228820-228985)
[»] scaffold0009 (1 HSPs)
scaffold0009 (10-174)||(241480-241642)
[»] scaffold2073 (1 HSPs)
scaffold2073 (15-338)||(678-1004)
[»] scaffold1755 (1 HSPs)
scaffold1755 (10-204)||(101-293)
[»] scaffold0007 (1 HSPs)
scaffold0007 (10-204)||(248498-248690)
[»] scaffold0996 (1 HSPs)
scaffold0996 (254-382)||(1687-1817)
[»] scaffold0520 (2 HSPs)
scaffold0520 (10-83)||(8288-8361)
scaffold0520 (10-150)||(1552-1690)
[»] scaffold1208 (1 HSPs)
scaffold1208 (10-174)||(165-327)
[»] scaffold0270 (1 HSPs)
scaffold0270 (10-192)||(25-205)
[»] scaffold0807 (1 HSPs)
scaffold0807 (7-91)||(2134-2218)
[»] scaffold0360 (1 HSPs)
scaffold0360 (241-377)||(2659-2793)
[»] scaffold0214 (1 HSPs)
scaffold0214 (210-377)||(20242-20407)
[»] scaffold0084 (1 HSPs)
scaffold0084 (51-193)||(29386-29526)
[»] scaffold0038 (1 HSPs)
scaffold0038 (15-81)||(31079-31145)
[»] scaffold0056 (1 HSPs)
scaffold0056 (7-116)||(67562-67670)
[»] scaffold0737 (1 HSPs)
scaffold0737 (305-377)||(7118-7189)


Alignment Details
Target: chr1 (Bit Score: 334; Significance: 0; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 10 - 382
Target Start/End: Original strand, 7635627 - 7636000
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7635627 aagaatattagatcacctaaggaattatggactgtaatctgagaagagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 7635726  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaac 209  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  7635727 tagagaaatattcataggaagtaggtgcagtgtaccaattatgggaatttagagaattcgaaagacctagtctaatctctctctatcttttctaaacaac 7635826  T
Q  210 tttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7635827 tttattttctgatatttactttttatgcacaacaaacctaccacctcgggtactaaaataaatttacacatcctatttcataacactattgtttaattga 7635926  T
Q  309 gattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaatttct 382  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7635927 gattaacacggtccttgtagaaacaaactttattatattactttgatagtttttagtacacttgctaaatttct 7636000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 16056941 - 16056638
Alignment:
Q  14 atattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactaga 113  Q
    ||||||||||||||||||||||| |||  |||||||||||| ||||||||||||||||| ||||||||| | ||||||||||||||||||| ||||||||    
T  16056941 atattagatcacctaaggaattagggatcgtaatctgagaagagggtcctaagtcaagggattgattagagctattttagttaatcatcgtaaaactaga 16056842  T
Q  114 gaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatcttttctaaacaa-ct 210  Q
    |||||||||||  ||| |||||| ||||||  ||||| ||||| | | || ||||||||||| ||||||||||||||||  || |||||| |||||| ||    
T  16056841 gaaatattcatgagaaataggtgtagtgtatcaattaggggaaatcaaagtattcgaaagacctagtctcatctctctccataacttttccaaacaatct 16056742  T
Q  211 ttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    |||||||||| |||||| ||||||||||||||||| |||| | ||| |||||||||||| |||||||||||||||||||||  |||| ||||| ||||||    
T  16056741 ttattttctgttatttaatttttatgcacaacaaatctactgtctcaggcactaaataactttacacatcctatttcataatgctatcgtttacttgaga 16056642  T
Q  311 ttaa 314  Q
    ||||    
T  16056641 ttaa 16056638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 14 - 360
Target Start/End: Complemental strand, 16062353 - 16062003
Alignment:
Q  14 atattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactaga 113  Q
    |||||||||||  |||||||||| ||| ||||||||||||| ||||| |||||| |||| ||| |||| || ||||||||||||||||||| ||||||||    
T  16062353 atattagatcatttaaggaattagggattgtaatctgagaagagggttctaagttaagggattaattatggctattttagttaatcatcgtaaaactaga 16062254  T
Q  114 gaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatcttttctaaacaa-ct 210  Q
    |||||||||||  ||| |||||| ||||||| |||||||| || | | |  ||||||||||| ||||||||||||| ||  || |||||  |||||| ||    
T  16062253 gaaatattcatgagaaataggtgtagtgtaccaattatggaaaatcaaatgattcgaaagacctagtctcatctctttccataactttttcaaacaatct 16062154  T
Q  211 ttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattgag 309  Q
    |||||||||  |||||| |||||||||||||||||||||| | ||||| |||| |||||| |||||||||| ||||||||||  |||||||||| |||||    
T  16062153 ttattttctattatttaatttttatgcacaacaaacctactgtctcggacactaaaataactttacacatcttatttcataatgctattgtttacttgag 16062054  T
Q  310 attaacacggtccttgtggaaacaaactttattatattactttgatagttt 360  Q
    ||||||||||| ||  ||||||| ||||| ||| ||||||||  |||||||    
T  16062053 attaacacggttctcatggaaacgaacttaattgtattacttcaatagttt 16062003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 13 - 193
Target Start/End: Complemental strand, 27355827 - 27355648
Alignment:
Q  13 aatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactag 112  Q
    ||||||||||||||||| |||||| |||||||||| |||||| ||||||||||||||||| ||||||||||  |||||||||||| ||||||||||||||    
T  27355827 aatattagatcacctaatgaattagggactgtaatatgagaagagggtcctaagtcaagggattgattaggcctattttagttaaccatcgtgaaactag 27355728  T
Q  113 agaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    ||||||||||||||||| |||||||||||||| ||||| || || | |||  ||||||||||| |||| ||||||||||||    
T  27355727 agaaatattcataggaaataggtgcagtgtaccaattagggaaactcaga-tattcgaaagacctagtttcatctctctct 27355648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 16055710 - 16055472
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| | ||||    
T  16055710 aagaatattagatcacctaaggatttaggggttgtaatctgagaagagggtcctaagtcaagggattgattagggctattttagttaatcatcataaaac 16055611  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatcttttctaaaca 207  Q
    || | ||||||||||  |||||||||| ||||||| ||||| || || | | |  ||||| ||||| ||||||||||||||||  || |||||| |||||    
T  16055610 taaaaaaatattcatgagaagtaggtgtagtgtaccaattaaggaaaatcaaatgattcggaagacctagtctcatctctctccataacttttccaaaca 16055511  T
Q  208 a-ctttattttctgatatttactttttatgcacaacaaa 245  Q
    |  ||||||| ||| |||||| |||||||||||||||||    
T  16055510 atatttatttactgttatttaatttttatgcacaacaaa 16055472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 14 - 232
Target Start/End: Complemental strand, 16061107 - 16060886
Alignment:
Q  14 atattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactaga 113  Q
    ||||||||||||||||||||||| ||| |||||| |||||| ||  ||||||||||| | ||||||||||| ||||||||||||||||||| ||||||||    
T  16061107 atattagatcacctaaggaattagggattgtaatatgagaagagaatcctaagtcaatggattgattagggctattttagttaatcatcgtaaaactaga 16061008  T
Q  114 gaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctat--cttttctaaacaa-ct 210  Q
    |||||||||||  ||| |||||||||||||| ||||| || || | | |  ||||||||||| |||||||||||||||| ||  |||||| |||||| ||    
T  16061007 gaaatattcatgagaaataggtgcagtgtaccaattagggaaaatcaaatgattcgaaagacctagtctcatctctctccattacttttccaaacaatct 16060908  T
Q  211 ttattttctgatatttactttt 232  Q
    |||||||||| |||||| ||||    
T  16060907 ttattttctgttatttaatttt 16060886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 10 - 283
Target Start/End: Complemental strand, 34065304 - 34065028
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| |||||||||||| |||| ||||  ||||||||| |||||  |||||||||||| |||  ||||||||||| |||||  ||||| |||||||||||    
T  34065304 aagattattagatcaccaaaggtattagagactgtaatatgagaggagggtcctaagttaagagattgattagggctatttg-gttaaccatcgtgaaac 34065206  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatcttttctaaaca 207  Q
    |||| || |||||||||||| ||| |||| ||||| ||||| |  || | |||| ||||||||||| ||||||||||||||||  ||||||||| |||||    
T  34065205 tagataagtattcataggaaatagatgcattgtaccaattaggaaaactcagaggattcgaaagacctagtctcatctctctccatatcttttccaaaca 34065106  T
Q  208 a-ctttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatccta 283  Q
    | ||||||||| ||  |||||||| ||||||||  |||||||||| |||||| ||||| |  ||||||||||||||||    
T  34065105 atctttattttttgtctatttactgtttatgcagcacaaacctactgcctcgagcacttataaaatttacacatccta 34065028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 13431101 - 13430918
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||| |||||||||||||||  ||||||||| |||||| || |||||||||||||| ||||||||||| ||||| |||||| |||||| ||||    
T  13431101 aagaatattagctcacctaaggaattagagactgtaatatgagaagagagtcctaagtcaagggattgattagggctatttaagttaaccatcgtaaaac 13431002  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||||||||||||||  ||| || ||||||||||| ||||| ||||| | |||| ||||||||| | |  ||||||||||||||    
T  13431001 tagagaaatattcatgagaactaagtgcagtgtaccaattaggggaactcagaggattcgaaagccctgatctcatctctctct 13430918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 13 - 361
Target Start/End: Complemental strand, 11667140 - 11666784
Alignment:
Q  13 aatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactag 112  Q
    ||||||||| |||||||||||||| || |||||||||||||| ||| ||||||||||||| ||||||||||| |||||| ||||| ||| |||||| |||    
T  11667140 aatattagaccacctaaggaattaggggctgtaatctgagaagaggatcctaagtcaagggattgattagggctatttt-gttaaccattgtgaaattag 11667042  T
Q  113 agaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaa--ct 210  Q
    |||   |||| || ||| |||||||||| ||| ||||| ||||| | |||| ||||||||||| |  || ||||| | ||||| |||||||| |||  ||    
T  11667041 agattcattcgtaagaaataggtgcagtataccaatta-gggaaatcagaggattcgaaagacatgatcccatctttgtctatattttctaatcaaatct 11666943  T
Q  211 ttattttctgatattt-actttttatgca--caa--caaacctaccgcctcgggc-actaaataa-atttacacatcctatttcataacactattgttta 303  Q
    ||| |||||| ||||| | ||||| ||||  |||  |||| |||| |||| |||| || ||||||  ||||||||||||||||  |||| ||| |||||     
T  11666942 ttactttctgttatttaattttttttgcaatcaaaccaaatctactgcctagggcaacaaaataacctttacacatcctatttattaacgctactgtttt 11666843  T
Q  304 attgagattaacacggtccttgtggaaacaaacttt-attatattactttgatagtttt 361  Q
    ||||| |||| |||||||||||||||||| |||||| ||| |||||||| |||||||||    
T  11666842 attgatattatcacggtccttgtggaaacgaactttaattttattacttcgatagtttt 11666784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 13 - 232
Target Start/End: Complemental strand, 21434615 - 21434394
Alignment:
Q  13 aatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactag 112  Q
    |||||||||||||||||||||||| ||||||||||||||||| || ||| |||||||| | |||||||| || ||||||||||||   |||||||| |||    
T  21434615 aatattagatcacctaaggaattagggactgtaatctgagaagagtgtcttaagtcaatggattgattatggctattttagttaactgtcgtgaaagtag 21434516  T
Q  113 agaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaa--ct 210  Q
    |||| |||||||||||| |||||| ||||||| ||||| | ||| | | || ||||||| ||| ||||||||||||||  ||| ||||| || |||  ||    
T  21434515 agaagtattcataggaaataggtgtagtgtaccaattaggagaactcataggattcgaatgacctagtctcatctctccatatattttccaagcaaatct 21434416  T
Q  211 ttattttctgatatttactttt 232  Q
    ||| |||||| |||||| ||||    
T  21434415 ttactttctgttatttaatttt 21434394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 48 - 193
Target Start/End: Complemental strand, 27331882 - 27331738
Alignment:
Q  48 ctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattcataggaagtaggtgcagtgtacaaa 147  Q
    ||||||| ||| ||||||||||||| ||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| ||    
T  27331882 ctgagaagaggttcctaagtcaagggatttattagggctattttagttaaccatcgtgaaactagagaaatattcataggaaataggtgcattgtaccaa 27331783  T
Q  148 ttatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    ||| || || | |||| ||||||||||| ||||||| |||||||||    
T  27331782 ttagggaaactcagaggattcgaaagacctagtctc-tctctctct 27331738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 7 - 351
Target Start/End: Complemental strand, 29643366 - 29643022
Alignment:
Q  7 tcgaagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtga 106  Q
    ||||||| ||||||| ||||||||||||||  |  |||||||  |||| |||||||||| |||||| ||||||||||| |||||| |||||  ||||||     
T  29643366 tcgaagattattagaccacctaaggaattagaggttgtaatcctagaagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtgg 29643268  T
Q  107 aactagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaac 206  Q
    ||||||| ||  ||||||| ||| |||||||||| ||| | ||| |||||  | ||  ||||||||||| ||  |||||||||||||   | ||  || |    
T  29643267 aactagaaaatcattcataagaa-taggtgcagtatactagttaggggaacatcgatgattcgaaagacctaaactcatctctctcttattcttaaaacc 29643169  T
Q  207 aacttt----attttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgttt 302  Q
    ||||||    |||||||| ||||||||||||| ||||| ||||||||| ||||||| |||||||  |||||||||||| ||    |||||  ||||| |     
T  29643168 aactttctttattttctgttatttactttttaagcaca-caaacctactgcctcggacactaaaataatttacacatcttagaaaataactttattgcta 29643070  T
Q  303 aattgagattaacacggtccttgtggaaacaaactttattatattactt 351  Q
    ||||||||||||||| ||||| ||||| || ||| ||||| ||||||||    
T  29643069 aattgagattaacacagtcctcgtggatacgaac-ttattttattactt 29643022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 1950600 - 1950420
Alignment:
Q  7 tcgaagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtga 106  Q
    ||||||| ||||||| |||||||||||||| || ||||| | |||||| ||||| ||||||||||| ||||||||||  |||||| |||||  |||||||    
T  1950600 tcgaagattattagaccacctaaggaattaggggctgtagtttgagaagagggttctaagtcaagggattgattaggactatttt-gttaactatcgtga 1950502  T
Q  107 aactagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctct 189  Q
    ||||||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |||||||||||||    
T  1950501 aactagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctagtctcatctct 1950420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 331
Target Start/End: Complemental strand, 37184000 - 37183684
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||| |||||| |||||  |||||| |||||||     
T  37184000 tattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactagaa 37183902  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaacaactt 211  Q
    ||  ||| ||| ||| |||||||||| ||| ||||| |||||  | ||  ||||||||||| |  |||||||||||||  | |||||| | |||| |  |    
T  37183901 aatcattaatacgaa-taggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctcattgtcttttccaaaactatct 37183803  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    ||||||||| ||||||   |||||||| | |||| |||| |||||||||||| ||| ||||||||||||||||  |  ||||| ||||| | ||||||||    
T  37183802 tattttctgttattta-aatttatgca-atcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacattattgctaaattgaga 37183705  T
Q  311 ttaacacggtccttgtggaaa 331  Q
    ||||||| ||||| |||||||    
T  37183704 ttaacacagtcctcgtggaaa 37183684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 45941398 - 45941590
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | ||||||||||||||||| |||||| ||||||||||  |||||| |||||  ||||||||||    
T  45941398 aagattattagaccacctaaggaattaggggctgtagtttgagaaaagggtcctaactcaagggattgattaggactatttt-gttaactatcgtgaaac 45941496  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  45941497 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 45941590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 49498639 - 49498458
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  49498639 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 49498541  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    || | ||  ||||||| ||| |||||||||| ||| ||||| ||||| |||||  ||||||||||| || ||||||||||||||    
T  49498540 tataaaatcattcataagaa-taggtgcagtataccaattaggggaacttagatgattcgaaagacctaatctcatctctctct 49498458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 21107433 - 21107241
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| || ||||||||||| || ||||| | |||||| ||||||||||||||||| ||||||||||  |||||| |||||  ||||||||||    
T  21107433 aagattattagaccatctaaggaattaggggctgtagtttgagaagagggtcctaagtcaagggattgattaggactatttt-gttaactatcgtgaaac 21107335  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| | |||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  21107334 tagaaaatcattcataagaa-taggtgcagtataccaattaggtgaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 21107241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 23022065 - 23021888
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| |||| ||||||||||||||||| || ||||  ||| |||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  23022065 aagattatttgatcacctaaggaattaggggctgtggtctaagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 23021967  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctct 189  Q
    ||||  |  ||||||| ||| |||||||||| ||| ||||| ||||| |||||  ||||||||||| || ||||||||||    
T  23021966 tagaatatcattcataagaa-taggtgcagtataccaattaggggaacttagatgattcgaaagacctaatctcatctct 23021888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 328
Target Start/End: Original strand, 28111038 - 28111357
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  | |||| |||||  |||||| |||    
T  28111038 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactgtttt-gttaactatcgtggaac 28111136  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct--atcttttctaaac- 206  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||  |  ||||||||||||||   ||||| | ||||     
T  28111137 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagatctgatctcatctctctcttattctttccaaaact 28111235  T
Q  207 aactttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaat 305  Q
    | |||||| |||||  ||||||  ||||||||| | |||| |||| ||||| | |||||||  |||||||||||||||  |  ||||  ||||| | |||    
T  28111236 atctttatattctgtttattta-attttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaat 28111334  T
Q  306 tgagattaacacggtccttgtgg 328  Q
    |||||||||||| ||||| ||||    
T  28111335 tgagattaacacagtcctcgtgg 28111357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 21018609 - 21018417
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||| |||||||||| ||||||||||  |||||| |||||  |||||| |||    
T  21018609 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcataagtcaagggattgattaggactatttt-gttaactatcgtggaac 21018511  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    || | ||  ||||||| ||| ||||| |||| ||||||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  21018510 taaaaaaccattcataagaa-taggttcagtatacaaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 21018417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 21111300 - 21111108
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||||| |||| |||||||| |  |||||| |||||  ||||||||||    
T  21111300 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaagttaagggattgattaagactatttt-gttaactatcgtgaaac 21111202  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| | |||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  21111201 tagaaaatcattcataagaa-taggtgcagtataccaattaggagaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 21111108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 27355262 - 27355173
Alignment:
Q  193 tatcttttctaaacaactttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatccta 283  Q
    ||||||||||||||||||||| |||||   |||||||||| ||||||||||||||||| |||||||||||||||  ||||||| |||||||    
T  27355262 tatcttttctaaacaactttaatttctataatttactttt-atgcacaacaaacctactgcctcgggcactaaaataatttacgcatccta 27355173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 317
Target Start/End: Original strand, 20398835 - 20399143
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| |||||||| ||||| |||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  20398835 aagattattagaccacctaaggaattaggggttgtagtctgagaagagggttctaactcaagggattgattaggactatttt-gttaactatcgtggaac 20398933  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc-tatcttttctaa--ac 206  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  | ||||||||| |  ||||||||||||| |||  |||| ||        
T  20398934 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgactcgaaagacctgatctcatctctctcttattctttccaactct 20399032  T
Q  207 aactttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaat 305  Q
    | ||||||||| || ||||||  ||||||||| | |||| |||| ||||| |||||| ||| ||||||||||||||||  |  ||||  ||||| | |||    
T  20399033 atctttattttatgttattta-attttatgcaaaccaaaactactgcctcaggcactaaaagaaatttacacatcctagatattaactttattgctaaat 20399131  T
Q  306 tgagattaacac 317  Q
    ||||||||||||    
T  20399132 tgagattaacac 20399143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 283
Target Start/End: Complemental strand, 30938672 - 30938431
Alignment:
Q  42 tgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattcataggaagtaggtgcagtg 141  Q
    |||||||| | || ||| ||||||||||||| |||||||| |  |||||||||||| ||||||||||||||| |||||||||||| || |||||| |||     
T  30938672 tgtaatcttataagaggatcctaagtcaagggattgattatgactattttagttaaccatcgtgaaactagataaatattcatagaaaataggtg-agta 30938574  T
Q  142 tacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaa-ctttattttctg-atatttactttttatgcac 239  Q
    ||  ||  |    || | |||| ||||||| ||  |  |||||||||||  ||| |||||||||||| |||||| ||| |  ||||||  ||||||||||    
T  30938573 tatcaaacagaataaatcagaggattcgaatgatctgatctcatctctccatatattttctaaacaagctttatattccgtttatttaacttttatgcac 30938474  T
Q  240 aacaaacctaccgcctcgggcactaaataaatttacacatccta 283  Q
     |||||||||| |||||||||| ||||  |||||||||||||||    
T  30938473 -acaaacctactgcctcgggcagtaaaataatttacacatccta 30938431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 328
Target Start/End: Complemental strand, 45960881 - 45960568
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||| | |||||| |||||  ||||||||||||||     
T  45960881 tattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagagctatttt-gttaactatcgtgaaactagaa 45960783  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctct--ctatctttt-ctaaacaactt 211  Q
    ||  ||| |||  || |||||||| | ||| ||||| |||||  | ||  ||||||||||| |  ||||||||||||   | |||||| | |||| |  |    
T  45960782 aatcattaata-caaataggtgcattataccaattaggggaacatcgatgattcgaaagacctgatctcatctctcttcttgtcttttccaaaactatct 45960684  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    ||||||||| ||||||   |||||||| | |||| |||| |||||||||||| ||| ||||||||||||||||  |  ||||  ||||| | ||||||||    
T  45960683 tattttctgttattta-aatttatgca-atcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgaga 45960586  T
Q  311 ttaacacggtccttgtgg 328  Q
    ||||||| ||||| ||||    
T  45960585 ttaacacagtcctcgtgg 45960568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 252 - 360
Target Start/End: Complemental strand, 16060574 - 16060465
Alignment:
Q  252 gcctcgggcactaa-ataaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtggaaacaaactttattatattact 350  Q
    |||||||||||||| |||| |||||||||||| ||||||||  |||||||||| |||||||||||||||| ||  ||||||  ||||| ||| |||||||    
T  16060574 gcctcgggcactaatataactttacacatcctgtttcataatgctattgtttacttgagattaacacggttctcatggaaaagaacttaattgtattact 16060475  T
Q  351 ttgatagttt 360  Q
    |  |||||||    
T  16060474 tcaatagttt 16060465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 378
Target Start/End: Complemental strand, 27331640 - 27331549
Alignment:
Q  286 tcataacactattgtttaattgagattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaat 378  Q
    |||||||  ||||||||||  ||||||||||||||||| |||||||  |||||||||||||||||| ||||| |||||  |||||||||||||    
T  27331640 tcataacgttattgtttaaccgagattaacacggtcctcgtggaaatgaactttattatattacttcgatag-ttttaggacacttgctaaat 27331549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 174
Target Start/End: Complemental strand, 34732502 - 34732340
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||  ||||| ||  |||| | |||||| ||||||||||||||||| |||||| |||| |||||| ||||| |||||||||||    
T  34732502 aagagtattagaccacctaacaaattaggggatgtactttgagaagagggtcctaagtcaagggattgat-agggctatttt-gttaaccatcgtgaaac 34732405  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaaga 174  Q
    |||||||  |||| || ||| ||  |||||| ||| ||||| ||||| | |||| ||||||||||    
T  34732404 tagagaatcattcgtaagaaataattgcagtataccaattaggggaactcagaggattcgaaaga 34732340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 2794209 - 2794390
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||| |||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  2794209 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggttctaactcaagggattgattatgactatttt-gttaactatcgtggaac 2794307  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||||||  ||||||| ||| |||||||||| ||| ||||| || ||  ||||  | ||||||||| |  ||||||||||||||    
T  2794308 tagagaatcattcataagaa-taggtgcagtataccaattagggaaacatagatgactcgaaagacctgatctcatctctctct 2794390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 320
Target Start/End: Complemental strand, 13430246 - 13430155
Alignment:
Q  230 ttttatgcacaacaaacctaccgcctcgggcactaaa-taaatttacacatcctatttcataacactattgtttaattgagattaacacggt 320  Q
    |||||||||||||||||||||  ||| |||||||||| ||| || ||||||||||||||||||   ||||||||| |||||||||| |||||    
T  13430246 ttttatgcacaacaaacctactacctggggcactaaaataacttgacacatcctatttcataaagttattgtttacttgagattaatacggt 13430155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 334
Target Start/End: Complemental strand, 3796963 - 3796644
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| |||||||| |  |||||| |||||  ||||| ||||||| |    
T  3796963 tattagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgattatgactatttt-gttaactatcgtaaaactagtg 3796865  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctcta--tcttttctaaacaacttt 212  Q
    |    |||  | ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| ||  |||||||||||||   ||||| | |  | |  ||    
T  3796864 actctttcgcaagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattctttccaactctatctt 3796766  T
Q  213 attttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagatt 312  Q
    ||||| || ||||||||||||||||| | |||| |||| |||||  ||||||||  |||||||||||||||  |  |||   ||||| | ||||||||||    
T  3796765 attttatgttatttactttttatgcaaaccaaaactactgcctcatgcactaaaataatttacacatcctaaatattaaacttattgctgaattgagatt 3796666  T
Q  313 aacacggtccttgtggaaacaa 334  Q
    ||||| ||||| |||| |||||    
T  3796665 aacacagtcctcgtgggaacaa 3796644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 378
Target Start/End: Complemental strand, 50196889 - 50196723
Alignment:
Q  210 tttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgag 309  Q
    ||||||||||| |||||| ||||||||||| |||||||||  ||||| | |||| || ||||||||||||||||  |  ||||  ||||| | | |||||    
T  50196889 tttattttctgttatttattttttatgcac-acaaacctattgcctcagacacttaaaaaatttacacatcctagatattaactttattgctaagttgag 50196791  T
Q  310 attaac-acggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaat 378  Q
    |||||| |||||||| ||||| ||||| |||||  ||||||||  |||||||||  ||||||||| ||||    
T  50196790 attaacaacggtcctcgtggatacaaattttat--tattacttcaatagtttttggtacacttgccaaat 50196723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 323
Target Start/End: Complemental strand, 27536471 - 27536359
Alignment:
Q  211 ttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattgag 309  Q
    |||||||||| ||||||||||||||||| | |||| |||| |||||||||||| ||| ||||||||||||||||  |  ||||  ||||| | |||||||    
T  27536471 ttattttctgttatttactttttatgca-atcaaaactactgcctcgggcactaaaagaaatttacacatcctaaatattaaccttattgctaaattgag 27536373  T
Q  310 attaacacggtcct 323  Q
    |||||||| |||||    
T  27536372 attaacacagtcct 27536359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 31204825 - 31205000
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| ||||||||||| |||||| |||||  |||||| || ||||     
T  31204825 tattagaccacctaaggaattaggggatgtagtttgagaagagggtcctaactcaagggattgattagggatatttt-gttaactatcgtggaattagaa 31204923  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc 192  Q
    ||  ||| ||| ||| |||||||||| ||| ||||| |||||  | ||  ||||||||||| |  |||||||||||||    
T  31204924 aatcattaatacgaa-taggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctc 31205000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 41058444 - 41058252
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| |||||||  ||||||||||||| || ||||| | |||||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  41058444 aagattattagactacctaaggaattaggggctgtagtttgagaagagggtcctaaatcaagggattgattatgactatttt-gttaactatcgtggaac 41058346  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||  ||| |||||  ||||  ||||  ||||||||||| || |||| |||||||  || ||||||||    
T  41058345 tagaaaatcattcataagaa-taggtgcagcataccaattagaggaacatagatgattcgaaagacctaatctcttctctcttcatattttctaa 41058252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 49853220 - 49853147
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagg 83  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||||||||||||||  ||||||||||    
T  49853220 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaagtcaagtgattgattagg 49853147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 204
Target Start/End: Complemental strand, 21114587 - 21114448
Alignment:
Q  63 taagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttaga 162  Q
    |||||||||| |||||||| |  |||||| |||||  |||||||||||||| ||  ||||||| ||| |||||||||| ||| ||||| | |||  ||||    
T  21114587 taagtcaagggattgattaagactatttt-gttaactatcgtgaaactagaaaatcattcataagaa-taggtgcagtataccaattaggagaacataga 21114490  T
Q  163 gaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
      ||||||||||| |  ||||||||||||  || ||||||||    
T  21114489 tgattcgaaagacctgatctcatctctcttcatattttctaa 21114448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 10 - 377
Target Start/End: Complemental strand, 22993827 - 22993460
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||| ||||||||||| |||||||||||| |||||| ||||    
T  22993827 aagaatattagatcacctaaggaattagggactgtaatttgagaagagggtcctaagtcaagggattgattagggatattttagttaaccatcgtaaaac 22993728  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaac 209  Q
    ||||||| ||||||||| || |||||||||||||| ||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  22993727 tagagaagtattcatagtaaataggtgcagtgtaccaattaggggaacttagaggattcgaaagacctagtctcatctctctctatcttttctaaacaac 22993628  T
Q  210 ttt-attttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    ||| |||||||  ||||||| | ||||||| |||||||||   ||||| |||||||||  |||||||||||||||||||||| |  ||||||||||||||    
T  22993627 tttaattttctattatttac-tattatgcataacaaacctcttgcctcaggcactaaaataatttacacatcctatttcatatcgttattgtttaattga 22993529  T
Q  309 gattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    |||||||||| |||| |||||||| ||||||||| |||||||| ||||||||||| |||||||||||||    
T  22993528 gattaacacgatcctcgtggaaacgaactttattttattacttcgatagtttttagtacacttgctaaa 22993460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 10 - 380
Target Start/End: Original strand, 18542616 - 18542989
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||| | |||| |||||||||| ||||||||||  |||||||||||| ||||||||| |    
T  18542616 aagaatattagatcacctaagaaattagggactgtaatctgagaagaaggtcttaagtcaagggattgattaggactattttagttaaccatcgtgaagc 18542715  T
Q  110 tagagaaatattcataggaagta-ggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaa-ca 207  Q
    ||||| | |||||||||||| || ||||||||| || || || ||||| | |||| ||||||||||| |  |||||||||||| ||| |||||||||  |    
T  18542716 tagaggagtattcataggaaatagggtgcagtgaaccaaataggggaactcagaggattcgaaagacatgatctcatctctctttatattttctaaagaa 18542815  T
Q  208 actttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaa-tttacacatcctatttcataacactattgttt-aa 304  Q
    ||||||  ||||| |||||||||||||||||| |||||||||| |||||| ||| | |||||||  ||||||||||||| | |||||  |||||||| ||    
T  18542816 actttaacttctgttatttactttttatgcac-acaaacctactgcctcgagcattaaaataaacattacacatcctatataataacgttattgtttaaa 18542914  T
Q  305 ttgagattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaattt 380  Q
    |||||||||||||||||||  ||||||| ||||| ||| ||||| || ||||| ||||| |||||||| |||||||    
T  18542915 ttgagattaacacggtcctcatggaaacgaacttgattttattaattcgatag-ttttagtacacttgttaaattt 18542989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 10 - 339
Target Start/End: Original strand, 17545921 - 17546257
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||| |||||| |||||||||| ||||||||||| |||||||||||| |||||||||||    
T  17545921 aagaatattagctcacctaaggaattagggattgtaatctgagaagagggtcataagtcaagggattgattagggctattttagttaaccatcgtgaaac 17546020  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaa- 208  Q
    |||||||  ||||||| ||| |||||||||| ||| ||||| |||||   |||  ||||||||||  |  ||||||||||||| || |||||||| |||     
T  17546021 tagagaatcattcataagaaataggtgcagtataccaattaggggaa-ccagaagattcgaaagatctgatctcatctctctccatattttctaatcaaa 17546119  T
Q  209 -ctttattttctgatatttactttttatgca--caa--caaacctaccgcctcgggc--actaaataa-atttacacatcctatttcataacactattgt 300  Q
      ||||||||||  ||||||  |||||||||  |||   ||| |||| | || ||||  || ||||||  ||||| |||||||||| ||||| |||||||    
T  17546120 tatttattttctattattta-gttttatgcaatcaaactaaatctactgtctagggcaaacaaaataacttttacgcatcctatttaataactctattgt 17546218  T
Q  301 ttaattgagattaacacggtccttgtggaaacaaacttt 339  Q
    || |||||  |||||| ||||||||||||||| ||||||    
T  17546219 tttattgaagttaacatggtccttgtggaaacgaacttt 17546257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 10884919 - 10885099
Alignment:
Q  7 tcgaagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtga 106  Q
    ||||||| ||||||| |||||||||||||| || ||||| | |||||| ||||| ||||||||||| ||||||||||  |||||| |||||  |||||||    
T  10884919 tcgaagattattagaccacctaaggaattaggggctgtagtttgagaagagggttctaagtcaagggattgattaggactatttt-gttaactatcgtga 10885017  T
Q  107 aactagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctct 189  Q
    ||||||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |||||||||||||    
T  10885018 aactagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctagtctcatctct 10885099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 351
Target Start/End: Original strand, 47051566 - 47051903
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||| ||||||| || ||||| | |||||| |||||||||| |||||| ||||||||| | |||||| |||||  |||||| |||||||     
T  47051566 tattagaccacctatggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagagctatttt-gttaactatcgtggaactagaa 47051664  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaacaactt 211  Q
    ||  ||| ||| ||| |||||||||| ||| | ||| |||||  ||||  ||||||||||| |  |||||||||||||  | |||||| | |||| |  |    
T  47051665 aatcattaatacgaa-taggtgcagtataccagttaggggaacatagatgattcgaaagacctgatctcatctctctcattgtcttttccaaaactatct 47051763  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    ||||||||| |||||||||||||||||| || ||||||| |||||||||||| ||| |||||||||||| |||  |  |||   ||||| | ||||||||    
T  47051764 tattttctgttatttactttttatgcac-accaacctactgcctcgggcactaaaagaaatttacacatgctagatattaatgttattgctaaattgaga 47051862  T
Q  311 ttaacacggtccttgtggaaacaaactttattatattactt 351  Q
    ||||||  ||||| ||||| || ||||| ||| ||||||||    
T  47051863 ttaacatagtcctcgtggatacgaacttaattttattactt 47051903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 18641901 - 18641723
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| || ||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  18641901 aagaatattagctcacctaaggaattagggactgtaatctgagaagagtgtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 18641803  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctc 190  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  | ||  | ||||||||| ||||||||||||||    
T  18641802 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacattgatgactcgaaagacctagtctcatctctc 18641723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 18644897 - 18644719
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| || ||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  18644897 aagaatattagctcacctaaggaattagggactgtaatctgagaagagtgtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 18644799  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctc 190  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  | ||  | ||||||||| ||||||||||||||    
T  18644798 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacattgatgactcgaaagacctagtctcatctctc 18644719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 28008200 - 28008019
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||| ||| |||||| ||||||||||  |||||| |||||  ||||||||||    
T  28008200 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcataactcaagggattgattaggactatttt-gttaactatcgtgaaac 28008102  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||||||  ||||||| ||| |||||||||| ||||||||  |||||  ||||  ||||||||||| || ||||||||||||||    
T  28008101 tagagaataattcataagaa-taggtgcagtatacaaatttggggaacatagatgattcgaaagacctaatctcatctctctct 28008019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 30220134 - 30219954
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||||||||||| |||||||||||||| ||  |  |||||  ||| ||||||||||||||||| ||||||||||| |||||| |||||  ||||||||||    
T  30220134 aagaatattagaccacctaaggaattaggggttacaatctatgaagagggtcctaagtcaagggattgattagggctatttt-gttaactatcgtgaaac 30220036  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc 192  Q
    |||||||  ||||||| ||| ||||||||||  || ||||| ||||| |||||  ||||||||||| |  |||||||||||||    
T  30220035 tagagaatcattcataagaa-taggtgcagttgaccaattaggggaacttagatgattcgaaagacatgatctcatctctctc 30219954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 35412575 - 35412753
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||| | ||||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  35412575 aagaatattagctaacctaaggaattagggactgtaatctgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 35412673  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctc 190  Q
    |||| ||  ||||||| ||| |||||||||| ||| |||||  ||||  | ||  | ||||||||| ||||||||||||||    
T  35412674 tagaaaatcattcataagaa-taggtgcagtataccaattagaggaacattgatgactcgaaagacctagtctcatctctc 35412753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 10 - 156
Target Start/End: Complemental strand, 3293088 - 3292943
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||||||||||| |||||||||||||| ||  ||||||| |||||  ||||| |||||||||| ||||||||||| |||||| ||||| |||||||||||    
T  3293088 aagaatattagaccacctaaggaattaggggttgtaatcggagaagtgggtcttaagtcaagggattgattagggctatttt-gttaaccatcgtgaaac 3292990  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaa 156  Q
    || ||||  ||||||| ||| |||||||| | ||| ||||| |||||    
T  3292989 tatagaatcattcataagaaataggtgcaatataccaattaggggaa 3292943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 282323 - 282191
Alignment:
Q  7 tcgaagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtga 106  Q
    ||||||||||||||||||||||||||||||   | ||||||||||||| ||||| ||||||||| | |||||||||   ||||||| |||| |||||| |    
T  282323 tcgaagaatattagatcacctaaggaattagtaattgtaatctgagaagagggttctaagtcaatg-attgattagaactattttaattaaccatcgtaa 282225  T
Q  107 aactagagaaatattcataggaagtaggtgcagt 140  Q
    |||||||| |||||||||| ||  ||||||||||    
T  282224 aactagaggaatattcataagacataggtgcagt 282191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 232
Target Start/End: Original strand, 52199978 - 52200200
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||| |||||| |||    
T  52199978 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaattcaagggattgattaggactatttt-gttaattatcgtggaac 52200076  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaac--a 207  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  |  |  ||||||||||| ||||||||||||||  ||| ||||  ||||  |    
T  52200077 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatcaatgattcgaaagacctagtctcatctctccatatatttttcaaacata 52200175  T
Q  208 actttattttctgatatttactttt 232  Q
     |||||||||||| |||||| ||||    
T  52200176 tctttattttctgttatttattttt 52200200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 377
Target Start/End: Original strand, 7486636 - 7487002
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  7486636 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 7486734  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc-tatcttttctaa--ac 206  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||| |||  |||| ||        
T  7486735 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactct 7486833  T
Q  207 aactttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact--aaataaatttacacatcctatttcataacactattgtttaa 304  Q
    | |||||| ||||| ||||||  |||||||||   |||| |||| |||| ||||| |  ||| ||||||||||||||||  |  ||||  ||||| | ||    
T  7486834 atctttatattctgttattta-attttatgcaacccaaaactactgcctagggcaattaaaagaaatttacacatcctaaatattaaccttattgctaaa 7486932  T
Q  305 ttgagattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||||||| |||||||||| ||| |   |  || |||||||| |||||| |||| |||||||||||||    
T  7486933 ttgagattaacacagtccttgtgggaacga---tatttttattacttcgatagtatttagtacacttgctaaa 7487002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 328
Target Start/End: Original strand, 54723807 - 54724126
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| ||||||||||| || || ||||| | |||||| ||||| |||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  54723807 aagattattagaccacctaaggaaataggggctgtagtttgagaagagggttctaactcaagggattgattaggactatttt-gttaactatcgtggaac 54723905  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct--atcttttctaaac- 206  Q
    |||| ||  ||||||| ||| |||||||||| ||| |||||||||||  ||||  ||||| ||||| |  ||||||||||||||   ||||| | ||||     
T  54723906 tagaaaatcattcataagaa-taggtgcagtataccaattatgggaacatagatgattcggaagacctgatctcatctctctcttattctttccaaaact 54724004  T
Q  207 aactttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaat 305  Q
    | |||||| |||||  ||||||  ||||||||| | |||| |||| ||||| |||||||||  |||||||||||||||  |  ||||  ||||| | |||    
T  54724005 atctttatattctgtttattta-attttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaactttattgctaaat 54724103  T
Q  306 tgagattaacacggtccttgtgg 328  Q
    ||| |||||||||||||| ||||    
T  54724104 tgaaattaacacggtcctcgtgg 54724126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 2775547 - 2775739
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  2775547 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaattcaagggattgattaggactatttt-gttaactatcgtggaac 2775645  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  2775646 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 2775739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 2778790 - 2778982
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  2778790 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaattcaagggattgattaggactatttt-gttaactatcgtggaac 2778888  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  2778889 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 2778982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 16243938 - 16244130
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||| |||||||||| ||||||||||  |||||| |||||  |||||| |||    
T  16243938 aagattattagaacacctaaggaattaggggctgtagtttgagaagagggtcttaagtcaagggattgattaggactatttt-gttaactatcgtggaac 16244036  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  16244037 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 16244130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 45896446 - 45896638
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  45896446 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 45896544  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  45896545 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 45896638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 356
Target Start/End: Original strand, 47054996 - 47055338
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||| ||||||| || || || | |||||| |||||||||| |||||| ||||||||| | |||||| |||||  |||||| |||||||     
T  47054996 tattagaccacctatggaattaggggctttagtttgagaagagggtcctaactcaagggattgattagagctatttt-gttaactatcgtggaactagaa 47055094  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaacaactt 211  Q
    ||  ||| ||| ||| |||||||||| ||| | |||||||||  ||||  ||||||||||| |  |||||||||||||  | |||||| | |||| |  |    
T  47055095 aatcattaatacgaa-taggtgcagtatactagttatgggaacatagatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatct 47055193  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    ||||||||| | |||| ||||||||||| || ||||||| |||| ||||||| ||| ||||||||||||||||  |  ||||  ||||  | ||||||||    
T  47055194 tattttctgttctttagtttttatgcac-accaacctactgccttgggcactaaaagaaatttacacatcctagatattaacgttatttctaaattgaga 47055292  T
Q  311 ttaacacggtccttgtggaaacaaactttattatattactttgata 356  Q
    |||||||  |||| ||||| || ||| | ||| |||||||| ||||    
T  47055293 ttaacacaatcctcgtggatacgaacctaattttattacttcgata 47055338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 2873629 - 2873810
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| ||     
T  2873629 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaat 2873727  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||    
T  2873728 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 2873810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 190
Target Start/End: Complemental strand, 10106723 - 10106551
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || ||||| | |||||| ||||| ||||||||||| ||||||||||  |||||| |||||  ||||||||||||||     
T  10106723 tattagaccacctaaggaattaggggctgtagtttgagaagagggttctaagtcaagggattgattaggactatttt-gttaactatcgtgaaactagaa 10106625  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctc 190  Q
    ||  ||||||| ||| |||||||||| ||| ||||| || ||  ||||  |||| |||||| ||||||||||||||    
T  10106624 aatcattcataagaa-taggtgcagtataccaatta-ggaaacatagatgattcaaaagacctagtctcatctctc 10106551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 24125564 - 24125745
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  24125564 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 24125662  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| || ||  ||||  ||||||||||| |  ||||||||||||||    
T  24125663 tagaaaatcattcataagaa-taggtgcagtataccaattagggaaacatagatgattcgaaagacctgatctcatctctctct 24125745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 24128841 - 24129022
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  24128841 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 24128939  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| || ||  ||||  ||||||||||| |  ||||||||||||||    
T  24128940 tagaaaatcattcataagaa-taggtgcagtataccaattagggaaacatagatgattcgaaagacctgatctcatctctctct 24129022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 30690801 - 30690982
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||||| |||||| |||||||||| |||||| |||||||||  ||||||| |||||  ||||||||||    
T  30690801 aagattattagaccacctaaggaattaggggttgtaatttgagaagagggtcctaactcaagggattgattagaattatttt-gttaactatcgtgaaac 30690899  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| || ||  ||||  ||||||||||| |  ||| ||||||||||    
T  30690900 tagaaaatcattcataagaa-taggtgcagtataccaattagggaaacatagatgattcgaaagacctgatcttatctctctct 30690982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 53815893 - 53816074
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||| |||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  53815893 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggttctaactcaagggattgattaggactatttt-gttaactatcgtggaac 53815991  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||    
T  53815992 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 53816074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 328
Target Start/End: Original strand, 538892 - 539211
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  538892 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 538990  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc-tat-cttttctaaac- 206  Q
    |||| ||  ||| ||| ||| |||||| ||| ||| ||||| || ||  || |  ||||||||||| || ||||||||||||| ||| |||| | ||||     
T  538991 tagaaaatcatttataagaa-taggtgtagtataccaattagggaaacatatatgattcgaaagacctaatctcatctctctcttatactttccaaaact 539089  T
Q  207 aactttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaat 305  Q
    | |||||| |||||  ||||||  ||||||||| | |||| |||| |||||||||| ||||  |||||||||||||||  |  ||||  ||||| | |||    
T  539090 atctttatattctgtttattta-attttatgcaaaccaaaactactgcctcgggcattaaaataatttacacatcctaaatattaaccttattgctaaat 539188  T
Q  306 tgagattaacacggtccttgtgg 328  Q
    |||||||||||| ||||| ||||    
T  539189 tgagattaacacagtcctcgtgg 539211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 25584742 - 25584934
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||| ||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  25584742 aagattattagaccacctaagaaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 25584840  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  25584841 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 25584934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 29344003 - 29343811
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  29344003 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 29343905  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||| | ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  29343904 tagaaaatcattcataagaa-taggtgcaatataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 29343811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 43809645 - 43809825
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||||||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  43809645 aagaatattagaccacctaaggaattagggggtgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 43809743  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc 192  Q
    |||| ||  ||||||| | |||||||||||| ||| ||||| |||||  | ||  ||||||||||| |  |||||||||||||    
T  43809744 tagaaaatcattcataag-agtaggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctc 43809825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 43926900 - 43927092
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  ||| || |||    
T  43926900 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcatggaac 43926998  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  43926999 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacatgatctcatctctcttcatattttctaa 43927092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 328
Target Start/End: Complemental strand, 50461672 - 50461359
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||| |||||| |||||  |||||| |||||||     
T  50461672 tattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactagaa 50461574  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaacaactt 211  Q
    ||  ||| ||| ||| |||||||||| ||| ||||| |||||  | ||  ||||||||||| |  |||||||||||||  | |||||| | |||| |  |    
T  50461573 aatcattaatacgaa-taggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatct 50461475  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    ||||||||| ||||||   |||||||| | |||| |||| |||||||||||| ||| ||||||||| ||| ||  |  ||||  ||||| | ||||||||    
T  50461474 tattttctgttattta-aatttatgca-atcaaaactactgcctcgggcactaaaagaaatttacatatcatagatattaacgttattgctaaattgaga 50461377  T
Q  311 ttaacacggtccttgtgg 328  Q
    ||||||| ||||| ||||    
T  50461376 ttaacacagtcctcgtgg 50461359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 55032121 - 55031904
Alignment:
Q  18 tagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaa 117  Q
    |||| |||||||||||| | ||  |||| | |||||| ||||| |||| |||||| ||||||||||  |||||| |||||  |||||| ||||||||||     
T  55032121 tagaccacctaaggaatcaggggatgtagtttgagaagagggttctaactcaagggattgattaggactatttt-gttaactatcgtggaactagagaat 55032023  T
Q  118 tattcataggaag---taggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaa--cttt 212  Q
     ||||||| |||    |||||||||| ||| ||||| |||||  | ||  ||||||||||| ||||||||||||||  ||| ||||| |||||   ||||    
T  55032022 cattcataagaatgaataggtgcagtataccaattaggggaacatcgatgattcgaaagacctagtctcatctctccgtatattttccaaacatatcttt 55031923  T
Q  213 attttctgatatttacttt 231  Q
    |||||||||||||||||||    
T  55031922 attttctgatatttacttt 55031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 32287452 - 32287271
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||| | || | |||||| |||| ||||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  32287452 aagattattagaccacctaaggaattagggattatagtttgagaagagggccctaactcaagggattgattatgactatttt-gttaactatcgtggaac 32287354  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||||||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||    
T  32287353 tagagaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 32287271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 16184816 - 16184636
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | | |||||| |||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  16184816 aagattattagaccacctaaggaattaggggctgtagtttaagaaaaaggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 16184718  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc 192  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  | ||  ||||||||||| |  |||||||||||||    
T  16184717 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctc 16184636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 20728776 - 20728584
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| ||||||||||||||  | ||||| | |||||| ||||||||||||||||| ||||||||||| |||||| |||||  ||| |  |||    
T  20728776 aagattattagaccacctaaggaattagaggctgtagtttgagaagagggtcctaagtcaagggattgattagggctatttt-gttaaatatcatcgaac 20728678  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| || ||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  20728677 tagaaaatcattcataagaa-tatgtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 20728584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 193
Target Start/End: Complemental strand, 23298737 - 23298563
Alignment:
Q  17 ttagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaa 116  Q
    ||||| |||||||| ||||| || ||||| | |||||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||| ||||||| |     
T  23298737 ttagaccacctaagaaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaagactatttt-gttaactatcgtggaactagaaag 23298639  T
Q  117 atattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
      ||||||| ||| |||||||||  ||| ||||| ||||| |||||  ||||||||||| || ||||||||||||||    
T  23298638 tcattcataagaa-taggtgcagcataccaattaagggaacttagatgattcgaaagacctaatctcatctctctct 23298563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 54461080 - 54461258
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||| |||||||||| |||||| ||  |||| |  |||||| |||||  |||||| |||    
T  54461080 aagaatattagctcacctaaggaattagggactgtaatatgagaagagggtcctaactcaagggatgaattatgactatttt-gttaactatcgtggaac 54461178  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctc 190  Q
    |||| ||  ||||||| ||| |||||||||| |||  |||  |||||  | ||  | ||||||||| ||||||||||||||    
T  54461179 tagaaaatcattcataagaa-taggtgcagtatacccatttggggaacattgatgactcgaaagacctagtctcatctctc 54461258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 23 - 231
Target Start/End: Complemental strand, 55034976 - 55034764
Alignment:
Q  23 cacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattc 122  Q
    |||||||||||||| ||  |||| | |||||| ||| | |||| |||||| ||||||||||  |||||| |||||  |||||| ||||||||||  ||||    
T  55034976 cacctaaggaattaggggatgtagtttgagaagaggattctaactcaagggattgattaggactatttt-gttaactatcgtggaactagagaatcattc 55034878  T
Q  123 ataggaag---taggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaa--ctttatttt 217  Q
    ||| |||    |||||||||| ||| ||||| |||||  | ||  ||||||||||| ||||||||||||||  | | ||||| |||||   |||||||||    
T  55034877 ataagaatgaataggtgcagtataccaattaggggaacatcgatgattcgaaagacctagtctcatctctccatgtattttccaaacatatctttatttt 55034778  T
Q  218 ctgatatttacttt 231  Q
    ||||||||||||||    
T  55034777 ctgatatttacttt 55034764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 222 - 361
Target Start/End: Complemental strand, 2279547 - 2279410
Alignment:
Q  222 tatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtc 321  Q
    ||||||||||||||||||| ||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| |||    
T  2279547 tatttactttttatgcaca-caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtc 2279449  T
Q  322 cttgtggaaacaaactttattatattactttgatagtttt 361  Q
    || ||||| || ||| ||||| |||||||| |||||||||    
T  2279448 ctcgtggatacgaac-ttattttattacttcgatagtttt 2279410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 6434907 - 6434726
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||| |||  |||||| |||||||| |  |||||| |||||  |||||| |||    
T  6434907 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggttctatctcaagggattgattatgactatttt-gttaactatcgtggaac 6434809  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  |||||||  || |||||||||| ||| ||||| |||||  ||||  ||||||||||| || ||||||||||||||    
T  6434808 tagaaaatcattcata-aaaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaatctcatctctctct 6434726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 8461616 - 8461427
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||| | |||| |||||| ||||||||||  |||||| |||||  ||| || |||    
T  8461616 aagattattagaccacctaaggaattaggggctgtagtttgagaagaggatactaaatcaagggattgattaggactatttt-gttaactatcatggaac 8461518  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttc 201  Q
    || ||||  ||||| | ||| |||||||||| ||| ||||| || ||  ||||  ||||||||||| || |||||||||||| |||||||||    
T  8461517 tatagaatcattcacaagaa-taggtgcagtataccaattagggaaacatagatgattcgaaagacctaatctcatctctctttatcttttc 8461427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 31549237 - 31549429
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||| ||||| || ||||| | | |||| ||||||||||||||||| |||||||| |  |||||| |||||  |||||| |||    
T  31549237 aagattattagaccacctaagaaattagggtctgtagttttagaagagggtcctaagtcaagggattgattatgactatttt-gttaactatcgtggaac 31549335  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| || |||||||| ||| |||||||||| ||| ||||| || || |||||  |||| |||||| |  ||| ||||||||  || ||||||||    
T  31549336 tagaaaattattcataagaa-taggtgcagtataccaattagggaaacttagatgattcaaaagacctgatcttatctctcttcatattttctaa 31549429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 19304818 - 19304640
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||| ||| ||| || |||||||| |  |||||| |||||  |||||| |||    
T  19304818 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcgtaactcaggggattgattatgactatttt-gttaactatcgtggaac 19304720  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctc 190  Q
    |||| ||  ||||||| ||| |||||||||||||| ||  | ||||| | |||| ||| ||||||| ||||||||||||||    
T  19304719 tagaaaatcattcataagaa-taggtgcagtgtaccaagcaggggaactcagaggatttgaaagacctagtctcatctctc 19304640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 202
Target Start/End: Original strand, 35751506 - 35751696
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||  |||    
T  35751506 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtagaac 35751604  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttct 202  Q
    |||| ||  ||| ||| |||  ||||||||| ||||||||| |||||  | ||  ||||||||||| |  ||||||||||||| || ||||||    
T  35751605 tagaaaatcattaatacgaa-aaggtgcagtatacaaattaggggaacatcgatgattcgaaagacctgatctcatctctctccatattttct 35751696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 11784836 - 11785012
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| ||  ||||||| || || |||||||||| |||||| ||| ||||||| |||||| |||||  |||||| |||||| |    
T  11784836 tattagaccacctaaggaattaggggttgtaatccgataagagggtcctaactcaagggatttattagggctatttt-gttaactatcgtggaactagtg 11784934  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    ||  ||||||| ||| || ||||||| ||| ||||| |||||  | ||  ||||||||||| ||   ||||||||||||    
T  11784935 aatcattcataagaa-tatgtgcagtataccaattaggggaacatcgatgattcgaaagacctaagttcatctctctct 11785012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 204
Target Start/End: Original strand, 22783669 - 22783859
Alignment:
Q  13 aatattagatcacctaaggaattatggactgta--atctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaact 110  Q
    ||||||| | |||||||||||||| || || ||  ||||||||| ||||||||||||||||| ||| ||||||  |||| | |||||  |||||||||||    
T  22783669 aatattataccacctaaggaattaggggctatataatctgagaagagggtcctaagtcaagggatttattaggactattat-gttaactatcgtgaaact 22783767  T
Q  111 agagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    ||||||  ||||||| ||| || |||  |||| | ||||| |||||   |||| ||||||||||| |  ||||||||||||| || ||||||||    
T  22783768 agagaatcattcataagaa-tatgtgatgtgtgccaattaggggaa-acagaggattcgaaagacctgatctcatctctctccatattttctaa 22783859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 204
Target Start/End: Original strand, 22788033 - 22788223
Alignment:
Q  13 aatattagatcacctaaggaattatggactgta--atctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaact 110  Q
    ||||||| | |||||||||||||| || || ||  ||||||||| ||||||||||||||||| ||| ||||||  |||| | |||||  |||||||||||    
T  22788033 aatattataccacctaaggaattaggggctatataatctgagaagagggtcctaagtcaagggatttattaggactattat-gttaactatcgtgaaact 22788131  T
Q  111 agagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    ||||||  ||||||| ||| || |||  |||| | ||||| |||||   |||| ||||||||||| |  ||||||||||||| || ||||||||    
T  22788132 agagaatcattcataagaa-tatgtgatgtgtgccaattaggggaa-acagaggattcgaaagacctgatctcatctctctccatattttctaa 22788223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 49743048 - 49742856
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  49743048 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 49742950  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||   |||||| ||| |||||||| | ||| ||||| |||||  || |  ||||||||||| |  ||||||||||||  || ||||||||    
T  49742949 tagaaaatcgttcataagaa-taggtgcaatataccaattaggggaacataaatgattcgaaagacctgatctcatctctcttcatattttctaa 49742856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 232
Target Start/End: Complemental strand, 19301634 - 19301413
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||| | |||||||| ||||| ||  |||| | |||||| |||||||||| |||||| ||| |||||   |||||| |||||  |||||  |||    
T  19301634 aagattattaaaccacctaagaaattaggggttgtagtttgagaagagggtcctaactcaagggatttattagaactatttt-gttaactatcgtagaac 19301536  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaa- 208  Q
    |||| ||  ||||||| ||| |||||||||||||  || || ||||| | |||| ||||||||||| ||||||||||||||  ||| ||||  ||||||     
T  19301535 tagaaaatcattcataagaa-taggtgcagtgtagcaaatacgggaactcagaggattcgaaagacctagtctcatctctc-atatatttttcaaacaaa 19301438  T
Q  209 -ctttattttctgatatttactttt 232  Q
     |||||||||||| |||||| ||||    
T  19301437 tctttattttctgttatttaatttt 19301413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 382
Target Start/End: Complemental strand, 30157956 - 30157801
Alignment:
Q  225 ttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtcctt 324  Q
    |||||||||||||||| ||||||||| ||||| | || | |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| |||||     
T  30157956 ttactttttatgcaca-caaacctactgcctcagacaattataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctc 30157858  T
Q  325 gtggaaacaaactttattatattactttgatagtttttaatacacttgctaaatttct 382  Q
    ||||| || ||||| ||| |||||||| ||||||| ||  ||||||||| ||||||||    
T  30157857 gtggatacgaacttaatt-tattacttcgatagttattggtacacttgccaaatttct 30157801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 338
Target Start/End: Original strand, 10963595 - 10963710
Alignment:
Q  222 tatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtc 321  Q
    ||||||||||||||||||| ||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| |||    
T  10963595 tatttactttttatgcaca-caaacctactgcctcaggcacttacaaaatttacacatcctagatattaactttattgctaagttgagattaacacagtc 10963693  T
Q  322 cttgtggaaacaaactt 338  Q
    || ||||| || |||||    
T  10963694 ctcgtggatacgaactt 10963710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 338
Target Start/End: Original strand, 10967104 - 10967219
Alignment:
Q  222 tatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtc 321  Q
    ||||||||||||||||||| ||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| |||    
T  10967104 tatttactttttatgcaca-caaacctactgcctcaggcacttacaaaatttacacatcctagatattaactttattgctaagttgagattaacacagtc 10967202  T
Q  322 cttgtggaaacaaactt 338  Q
    || ||||| || |||||    
T  10967203 ctcgtggatacgaactt 10967219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 377
Target Start/End: Original strand, 18883400 - 18883565
Alignment:
Q  210 tttattttctgatatttactttttatg-cacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    ||||||||||| ||||||| ||||||  |||| ||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||    
T  18883400 tttattttctgttatttaccttttatttcaca-caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttga 18883498  T
Q  309 gattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||| ||||| ||| | || ||| ||||| || ||||||||||| ||||| |||||||||||||    
T  18883499 gattaacacagtcctcgtgaatacgaac-ttattttactactttgatag-ttttagtacacttgctaaa 18883565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 377
Target Start/End: Complemental strand, 54736143 - 54735979
Alignment:
Q  210 tttattttctgatatttacttttta-tgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||    
T  54736143 tttattttctgttatttactttttattgcac-acaaacctactgcctc-ggcacttataaaatttacacatcctagatattaactttattgctaagttga 54736046  T
Q  309 gattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    |||||||||  |||| ||||| || ||| ||||| ||| |||| ||||  |||||||||||||||||||    
T  54736045 gattaacacaatcctcgtggatacgaac-ttattttataacttcgata-attttaatacacttgctaaa 54735979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 377
Target Start/End: Original strand, 2784311 - 2784459
Alignment:
Q  226 tactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttg 325  Q
    |||||||||| |||| ||||||||| ||||| |||||| |  || |||||||||||||  |  ||||  ||||| | | ||||||||||||| ||||| |    
T  2784311 tactttttatacaca-caaacctactgcctcaggcacttataaagtttacacatcctagatactaactttattgctaagttgagattaacacagtcctcg 2784409  T
Q  326 tggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    |||| || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  2784410 tggatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 2784459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 125
Target Start/End: Complemental strand, 17040151 - 17040037
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| |||||||||| ||||||||||| || ||||| | |||||| |||||||||| | |||| ||||||||||  |||||| |||||  ||| ||||||    
T  17040151 aagattattagatcatctaaggaattaggggctgtagtttgagaagagggtcctaacttaagggattgattaggactatttt-gttaactatcatgaaac 17040053  T
Q  110 tagagaaatattcata 125  Q
    || ||||  |||||||    
T  17040052 taaagaatcattcata 17040037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 10881545 - 10881737
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| ||| |||||||||| || ||||| | |||||| |||||| |||||||| | |||||||||   |||||| |||||  || ||| |||    
T  10881545 aagattattagaccacttaaggaattaggggctgtagtttgagaagagggtcttaagtcaaaggattgattagaactatttt-gttaactattgtggaac 10881643  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  |||||||| |||  || ||||||||    
T  10881644 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacttgatctcatctttcttcatattttctaa 10881737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 11190597 - 11190773
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| ||  ||||   |||||| ||||| |||| |||||| ||||||||||  |||||| |||||  |||||| ||| |||     
T  11190597 tattagaccacctaaggaattaggggttgtaggttgagaagagggttctaactcaagggattgattaggactatttt-gttaactatcgtggaacaagaa 11190695  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    ||  ||||||| ||| |||||||| | ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||    
T  11190696 aatcattcataagaa-taggtgcaatataccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 11190773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 12561358 - 12561182
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| ||||||||||  |||||| |||||  ||||| ||||||| |    
T  12561358 tattagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtaaaactaggg 12561260  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |    |||| | ||| |||||||||| ||  ||||| |||||  ||||  ||||||||||| ||  |||||||||||||    
T  12561259 actctttcacaagaa-taggtgcagtatatcaattaggggaacatagatgattcgaaagacctaaactcatctctctct 12561182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 17141514 - 17141654
Alignment:
Q  51 agaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattcataggaagtaggtgcagtgtacaaatta 150  Q
    |||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||||| |||  ||||||| ||| |||||||| | ||| |||||    
T  17141514 agaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagcgaatcattcataagaa-taggtgcaatataccaatta 17141611  T
Q  151 tgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
     |||||  |||| ||||| |||||| ||  |||||||||||||    
T  17141612 ggggaacatagataattcaaaagacctaagctcatctctctct 17141654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 377
Target Start/End: Original strand, 4250574 - 4250738
Alignment:
Q  210 tttattttctgatatttactttttat-gcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    ||||||||||| ||||||| |||||| ||||| ||||||||| || || |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||    
T  4250574 tttattttctgttatttacattttattgcaca-caaacctactgcttcaggcacttataaaatttacacatcctagatattaactttattgctaagttga 4250672  T
Q  309 gattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||| ||||| |||| |  ||  |||||| |||||||| ||||| ||||| |||||||||||||    
T  4250673 gattaacacagtcctcgtggtacgaa--tttattttattacttcgatag-ttttagtacacttgctaaa 4250738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 46885011 - 46885185
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || |||||| |  |||| ||||||| || |||||| ||||||||||  |||||| | |||  |||||| |||||||     
T  46885011 tattagaacacctaaggaattaggggctgtaaccctagaagagggtcccaactcaagggattgattaggactatttt-gctaactatcgtg-aactagaa 46885108  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc 192  Q
    ||  ||||| | ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| ||  ||||||||||||    
T  46885109 aagcattcacaagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctc 46885185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 48064159 - 48064063
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactag 112  Q
    ||||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| ||||||||||  |||||| |||||  ||||| |||||||    
T  48064159 tattagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtaaaactag 48064063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 338
Target Start/End: Original strand, 10960088 - 10960203
Alignment:
Q  222 tatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtc 321  Q
    |||||||||||||||||| ||||||||||  |||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| |||    
T  10960088 tatttactttttatgcac-acaaacctactacctcaggcacttacaaaatttacacatcctagatattaactttattgctaagttgagattaacacagtc 10960186  T
Q  322 cttgtggaaacaaactt 338  Q
    || ||||| || |||||    
T  10960187 ctcgtggatacgaactt 10960203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 22416958 - 22416890
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagg 83  Q
    ||||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| ||||||||||    
T  22416958 tattagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgattagg 22416890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 193
Target Start/End: Complemental strand, 25442981 - 25442807
Alignment:
Q  17 ttagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaa 116  Q
    ||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| ||||||||||  |||||| |||||  ||||| ||||||| ||     
T  25442981 ttagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtaaaactagggac 25442883  T
Q  117 atattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
      ||||| | ||| |||||||| | ||| ||||| |||||  || |  ||||||||||| ||  |||||||||||||    
T  25442882 tcattcacaagaa-taggtgcaatataccaattaggggaacataaatgattcgaaagacctaaactcatctctctct 25442807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 32367253 - 32367185
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagg 83  Q
    ||||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| ||||||||||    
T  32367253 tattagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgattagg 32367185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 54720041 - 54720215
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| ||  ||||| |  |||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||  |||||| |    
T  54720041 tattagaccacctaaggaattaggggttgtaaccctagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtagaactagtg 54720139  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctct 191  Q
    ||  ||||| | ||| |||||||| | ||| |||||||| ||  ||||  ||||||||||| ||  |||||||||||    
T  54720140 aatcattcacaagaa-taggtgcaatataccaattatggaaacatagatgattcgaaagacctaaactcatctctct 54720215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 303 - 377
Target Start/End: Original strand, 10885224 - 10885298
Alignment:
Q  303 aattgagattaacacggtccttgtggaaacaaactttattatattactttgat-agtttttaatacacttgctaaa 377  Q
    ||||||||||||||| ||||| ||||| |||||| ||||| ||||||||||||   |||||| |||||||||||||    
T  10885224 aattgagattaacacagtcctcgtggatacaaac-ttattttattactttgatgcatttttagtacacttgctaaa 10885298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 17531780 - 17531604
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| ||  ||||| |  |||| |||||||||| |||||| ||||||||||  |||||| |||||  ||||| ||||||| |    
T  17531780 tattagaccacctaaggaattaggggttgtaaccctagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtaaaactaggg 17531682  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |   ||||| | ||| |||||||||| ||| |||||  ||||  ||||  ||||||| ||| ||  |||||||||||||    
T  17531681 actcattcacaagaa-taggtgcagtataccaattagaggaacatagatgattcgaacgacctaaactcatctctctct 17531604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 377
Target Start/End: Complemental strand, 42354306 - 42354178
Alignment:
Q  247 ctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtggaaacaaactttattatat 346  Q
    |||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||||| | |||||||| |||| ||||| ||||| || ||| ||||| |||    
T  42354306 ctactgcctcaggcacttataaaatttacacatcctagatattaactttattgttaagttgagattgacacagtcctcgtggatacgaac-ttattttat 42354208  T
Q  347 tactttgatagtttttaatacacttgctaaa 377  Q
    ||||| ||||| ||||| |||||||||||||    
T  42354207 tacttcgatag-ttttagtacacttgctaaa 42354178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 193
Target Start/End: Original strand, 28266021 - 28266163
Alignment:
Q  49 tgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattcataggaagtaggtgcagtgtacaaat 148  Q
    |||||| ||||| |||  |||||| ||||||||||  |||||| |||||  |||||| ||||||| ||  |||||||  || |||||||||| ||| |||    
T  28266021 tgagaagagggttctatctcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataaaaa-taggtgcagtataccaat 28266118  T
Q  149 tatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    || |||||  ||||  ||||||||||| |  ||||||||||||||    
T  28266119 taggggaacatagatgattcgaaagacctgatctcatctctctct 28266163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 211; Significance: 1e-115; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 10 - 382
Target Start/End: Complemental strand, 13021396 - 13021022
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||||||||||||||| |||||| ||| ||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  13021396 aagaatattagatcacttaaggagttagggactataatctgagaagagggtcctaagtcaagggattgattagggctattttagttaatcatcgtaaaac 13021297  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaac 209  Q
    |||||||||||||||  ||| |||||||||||||| ||||| ||||| |||||| |||| |||||| || |||||||||||||||| |||| ||||||||    
T  13021296 tagagaaatattcatgagaaataggtgcagtgtaccaattaggggaacttagaggattcaaaagacctactctcatctctctctatattttataaacaac 13021197  T
Q  210 tttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaa-tttacacatcctatttcataacactattgtttaattg 307  Q
    ||||||||||| ||||||||| ||||||| |||||||||||  ||||||||||| |||||||  ||| ||||||||||||||||| |||||||||| |||    
T  13021196 tttattttctgctatttacttgttatgcaaaacaaacctactacctcgggcactaaaataaacattaaacatcctatttcataacgctattgtttacttg 13021097  T
Q  308 agattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaatttct 382  Q
    |||||||||||||||| ||||||||||| || |||  ||||||| ||| ||||||| ||||||||||||||||||    
T  13021096 agattaacacggtcctcgtggaaacaaatttaattgcattacttcgatggtttttagtacacttgctaaatttct 13021022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 10 - 378
Target Start/End: Complemental strand, 11192720 - 11192356
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||||||||||||||||||| |||||||| |||||||| || ||| ||||||||||      |||||| ||||||||||||||||||| ||||    
T  11192720 aagaatattagatcacctaaggaattagggactgtagtctgagaagagagtcttaagtcaaggg-----ttagggctattttagttaatcatcgtaaaac 11192626  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaac 209  Q
    || ||||||||||||  ||| |||||||| ||||| ||||| ||||  | |||| ||||||||||| || ||  ||||||||||||||||||||||||||    
T  11192625 tatagaaatattcatgagaaataggtgcattgtaccaattaggggacctcagaggattcgaaagacctaatcatatctctctctatcttttctaaacaac 11192526  T
Q  210 tttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaa-tttacacatcctatttcataacactattgtttaattg 307  Q
    |||||||| || |||||||||||||||||| ||| |||||  |||||||||||| ||||||| ||||| |||| ||||||||||  | |||||||| |||    
T  11192525 tttattttatgttatttactttttatgcac-acatacctattgcctcgggcactaaaataaactttactcatcttatttcataatgcaattgtttacttg 11192427  T
Q  308 agattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaat 378  Q
    ||||||||||||| || |||||||| ||||| ||| |||||||| ||||||||||| ||||||||||||||    
T  11192426 agattaacacggtactcgtggaaacgaacttaattgtattacttcgatagtttttagtacacttgctaaat 11192356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 10 - 266
Target Start/End: Complemental strand, 12988267 - 12988013
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||||||||||||||||||| |||||||||| || ||| ||||||||||||||||| ||||||||| | ||| |  |||||||||||| ||||    
T  12988267 aagaatattagatcacctaaggaattagggactgtaatatgcgaagagggtcctaagtcaagggattgattagagctatgtatgttaatcatcgtaaaac 12988168  T
Q  110 tagagaaatattcat-aggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaa 208  Q
    ||||||||||||||| ||||| |||||||||||||| ||||| ||||| |||||| |||| |||||| ||||| ||  ||||||||| |||| |||||||    
T  12988167 tagagaaatattcatgaggaa-taggtgcagtgtaccaattacgggaacttagaggattcaaaagacctagtcaca--tctctctatattttataaacaa 12988071  T
Q  209 ctttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaa 266  Q
    |||||||||||  ||||||||||||||||| ||||||||||| ||||||| |||||||    
T  12988070 ctttattttctactatttactttttatgcaaaacaaacctactgcctcggccactaaa 12988013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 240
Target Start/End: Complemental strand, 9839539 - 9839308
Alignment:
Q  7 tcgaagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtga 106  Q
    ||||||| ||||||| |||||||||||||| |||||||| | |||||| ||||||||||||||||| ||||||||||| || ||| |||||  |||||||    
T  9839539 tcgaagattattagaccacctaaggaattagggactgtagtttgagaagagggtcctaagtcaagggattgattagggctacttt-gttaactatcgtga 9839441  T
Q  107 aactagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaac 206  Q
    ||||||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||| || ||||||||||    
T  9839440 aactagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctc-atattttctaaac 9839343  T
Q  207 -aactttattttctgatatttactttttatgcaca 240  Q
     |||||||||||||  |||||| ||||||||||||    
T  9839342 aaactttattttcttttatttaatttttatgcaca 9839308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 2846285 - 2846466
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||||||||||| |||||||||||||| || ||||| | |||||| ||||||||| ||||||| |||||||| || |||||| ||||| |||||||||||    
T  2846285 aagaatattagaccacctaaggaattaggggctgtagtttgagaagagggtcctatgtcaagggattgattatggctatttt-gttaaccatcgtgaaac 2846383  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc 192  Q
    |||||||  |||| || ||| |||||||||| ||| ||||| ||| | |||||| ||||||||||| |  |||||||| ||||    
T  2846384 tagagaatcattcgtaagaaataggtgcagtataccaattagggggacttagaggattcgaaagacttgatctcatctatctc 2846466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 377
Target Start/End: Original strand, 23008043 - 23008408
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||||||||||| ||||||||||||||  | ||||||||||| || ||||||||||||||||| ||||||||||| |||||| |||||  ||||||||||    
T  23008043 aagaatattagaccacctaaggaattagaggctgtaatctgataagagggtcctaagtcaagggattgattagggctatttt-gttaactatcgtgaaac 23008141  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaa- 208  Q
    || ||||  ||||| | ||| ||||||  ||| || |||||||| || | |||| ||||||||||| |  ||||||||||||   | ||||| ||||||     
T  23008142 taaagaatcattcacaagaa-taggtgttgtggaccaattatggaaactcagaggattcgaaagacttgatctcatctctcttcttattttccaaacaaa 23008240  T
Q  209 -ctttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattg 307  Q
     ||||||||| || ||||||| ||||||| | | |||| |||  | || |||||  |||  |||||||||||||||  |  ||||  ||||| |||||||    
T  23008241 tctttattttatgttatttac-ttttatgga-atcaaatctattgtcttgggcatcaaaataatttacacatcctaaatattaactttattgcttaattg 23008338  T
Q  308 agattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    |||||||||| |||||  |||| || | |||   | || ||||| |||||| |||| |||||||||||||    
T  23008339 agattaacacagtcctcatggatacgatcttagatttactacttcgatagtatttagtacacttgctaaa 23008408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 377
Target Start/End: Complemental strand, 23780321 - 23779956
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||||||||||| ||||||||||||||  | ||||||||||| || ||||||||||||||||| ||||||||||| |||||| |||||  ||||||||||    
T  23780321 aagaatattagaccacctaaggaattagaggctgtaatctgataagagggtcctaagtcaagggattgattagggctatttt-gttaactatcgtgaaac 23780223  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaa- 208  Q
    || ||||  ||||| | ||| ||||||  ||| || |||||||| || | |||| ||||||||||| |  ||||||||||||   | ||||| ||||||     
T  23780222 taaagaatcattcacaagaa-taggtgttgtggaccaattatggaaactcagaggattcgaaagacttgatctcatctctcttcttattttccaaacaaa 23780124  T
Q  209 -ctttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattg 307  Q
     ||||||||| || ||||||| ||||||| | | |||| |||  | || |||||  |||  |||||||||||||||  |  ||||  ||||| |||||||    
T  23780123 tctttattttatgttatttac-ttttatgga-atcaaatctattgtcttgggcatcaaaataatttacacatcctaaatattaactttattgcttaattg 23780026  T
Q  308 agattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    |||||||||| |||||  |||| || | |||   | || ||||| |||||| |||| |||||||||||||    
T  23780025 agattaacacagtcctcatggatacgatcttagatttactacttcgatagtatttagtacacttgctaaa 23779956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 26942572 - 26942396
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || ||||||| |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||||||     
T  26942572 tattagaccacctaaggaattaggggctgtaatttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaa 26942474  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    ||  ||||||||||| |||||||||| ||| ||||| |||||  ||||  | ||||||||| |  ||||||||||||||    
T  26942473 aatcattcataggaa-taggtgcagtataccaattaggggaacatagatgaatcgaaagacctgatctcatctctctct 26942396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 28848823 - 28848929
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||||||| |||||||||||||||||| |||||||||| |||||| |||| |||||||||||| ||| || |||  |||||||||||| |||||| ||||    
T  28848823 aagaatatcagatcacctaaggaattagggactgtaatttgagaagagggccctaagtcaagggatttatcaggactattttagttaaccatcgtaaaac 28848922  T
Q  110 tagagaa 116  Q
    |||||||    
T  28848923 tagagaa 28848929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 361
Target Start/End: Original strand, 11247744 - 11248104
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||||||||||| |||||||||||||| || ||||||||||| || || || ||||||||||| |||||||| || |||||| ||||| |||| ||||||    
T  11247744 aagaatattagaccacctaaggaatta-gggctgtaatctgataagagagttctaagtcaagggattgattaaggatatttt-gttaaccatcatgaaac 11247841  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctca--tctctctctatcttttctaaaca 207  Q
    |||||||  |||| || ||| || ||| ||| ||||||||| |||||   |||| |||||||| |  |  |||||  ||||||||||| |||||||| ||    
T  11247842 tagagaatcattcgtaagaaataagtgtagtatacaaattaggggaa-ccagaggattcgaaaaaactgatctcatctctctctctatattttctaatca 11247940  T
Q  208 a--ctttattttctgatatttactttttatgca--caa--caaacctaccgcctcgggc--actaaataaattt-acacatcctatttcataacactatt 298  Q
    |  ||||| |||||| ||||||  |||||||||  |||  |||| ||||  ||| ||||  || |||||| ||| |||||||||| || ||||| ||| |    
T  11247941 aatctttactttctgttatttaaattttatgcaatcaaaccaaatctactacctagggcaaacaaaataactttaacacatcctacttaataacgctact 11248040  T
Q  299 gtttaattgagattaacacggtccttgtggaaacaaactttat-tatattactttgatagtttt 361  Q
    |||| ||||| |||| || ||||| ||||||||| |||||| | | |||||||| |||||||||    
T  11248041 gttttattgatattatcatggtccctgtggaaacgaactttttatttattacttagatagtttt 11248104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 3596923 - 3596742
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  3596923 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 3596825  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  || |  ||||||||||| || ||||||||||||||    
T  3596824 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacataaatgattcgaaagacctaatctcatctctctct 3596742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 23384894 - 23384713
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| || ||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  23384894 aagattattagaacaactaaggaattaggggctgtagtttgagaagagggtcctaaatcaagggattgattaggactatttt-gttaactatcgtggaac 23384796  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||| ||||||| ||| |||||||||| ||| ||||| |||||  ||||  | ||||||||| || ||||||||||||||    
T  23384795 tagaaaaacattcataagaa-taggtgcagtataccaattaggggaacatagatgaatcgaaagacctaatctcatctctctct 23384713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 328
Target Start/End: Original strand, 9953945 - 9954263
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||| ||     
T  9953945 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcctaactcaagggattgattaagactatttt-gttaactatcgtggaat 9954043  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaa--ca 207  Q
    |||| || |||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||  |  ||||||||||||   ||||||| |||   |    
T  9954044 tagaaaattattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagagctgatctcatctctcttattcttttccaaaacta 9954142  T
Q  208 actttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaatt 306  Q
     |||||| |||||  ||||||  ||||||||| | |||| |||| ||||| |||||||||  |||||||||||||||  |  ||||  ||||| | ||||    
T  9954143 tctttatattctgtttattta-attttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaaccttattgctaaatt 9954241  T
Q  307 gagattaacacggtccttgtgg 328  Q
    ||||||||||| ||||| ||||    
T  9954242 gagattaacacagtcctcgtgg 9954263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 156
Target Start/End: Original strand, 20185726 - 20185870
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||||||||||||||| |||||||| |  |||||| |||||  ||||||||||    
T  20185726 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaagtcaagggattgattatgactatttt-gttaactatcgtgaaac 20185824  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaa 156  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||    
T  20185825 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaa 20185870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 156
Target Start/End: Complemental strand, 22150265 - 22150121
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||||||||||||||| |||||||| |  |||||| |||||  ||||||||||    
T  22150265 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaagtcaagggattgattatgactatttt-gttaactatcgtgaaac 22150167  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaa 156  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||    
T  22150166 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaa 22150121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 2379212 - 2379393
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| ||||||||||||||  | ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  2379212 aagattattagaccacctaaggaattacaggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 2379310  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||| ||||||| |  ||||||||||||||    
T  2379311 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgatttgaaagacctgatctcatctctctct 2379393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 6513238 - 6513419
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| || ||||||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  6513238 aagattattagaccacctaaggaattaggggatgtagtttgagaagagagtcctaactcaagggattgattaagactatttt-gttaactatcgtggaac 6513336  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||||||  ||||||| ||| |||||||||| ||  ||||| |||||| ||||  ||||||||||| |  ||||||||||||||    
T  6513337 tagagaatcattcataagaa-taggtgcagtatatcaattaggggaatatagatgattcgaaagacctgatctcatctctctct 6513419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 323
Target Start/End: Complemental strand, 1125877 - 1125563
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||| ||| |||||| ||||||||||  |||||| |||||  ||||||||||    
T  1125877 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcttaactcaagggattgattaggactatttt-gttaactatcgtgaaac 1125779  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaa--ca 207  Q
    |||| ||  ||||||| ||| ||||| |||| ||| ||||| | |||  || |  ||||||||||| |  ||||||||||||   ||||||| |||   |    
T  1125778 tagaaaatcattcataagaa-taggtccagtataccaattaggagaacataaatgattcgaaagacatgctctcatctctcttgttcttttccaaaacta 1125680  T
Q  208 actttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaat 305  Q
     |||||| |||||  ||||||  ||||||||| | |||| |||| ||||| |||||| ||| ||||||||||||||||  |  ||||  ||||| | |||    
T  1125679 tctttatattctgtttattta-attttatgcaaaccaaaactactgcctcaggcactaaaagaaatttacacatcctagatattaacgttattgctaaat 1125581  T
Q  306 tgagattaacacggtcct 323  Q
    |||||||||||| |||||    
T  1125580 tgagattaacacagtcct 1125563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 156
Target Start/End: Complemental strand, 5738226 - 5738082
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  5738226 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 5738128  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaa 156  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||    
T  5738127 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaa 5738082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 17106752 - 17106560
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| ||||||||||||||||| ||||||||||  |||||| |||||  |||||| |||    
T  17106752 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcctaagtcaagggattgattaggactatttt-gttaactatcgtggaac 17106654  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| || ||||| | ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  17106653 tagaaaatcattcataagaa-tatgtgcaatataccaattaggggaacatagatgattcgaaagacttgatctcatctctcttcatattttctaa 17106560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 30655426 - 30655618
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  ||  || |||    
T  30655426 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaattcaagggattgattaggactatttt-gttaactattatggaac 30655524  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||||||  ||||||| ||| || ||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  30655525 tagagaatcattcataagaa-taagtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 30655618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 221 - 377
Target Start/End: Original strand, 14966417 - 14966570
Alignment:
Q  221 atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggt 320  Q
    ||||||||||||||||||| ||||| |||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| ||    
T  14966417 atatttactttttatgcac-acaaatctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagt 14966515  T
Q  321 ccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||| ||||| || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  14966516 cctcgtggatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 14966570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 13005171 - 13005352
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||| ||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  13005171 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcataactcaagggattgattaggactatttt-gttaactatcgtggaac 13005269  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||||||  ||||||| ||| |||||| ||| ||| ||||| |||||  ||||  ||| ||||||| |  ||||||||||||||    
T  13005270 tagagaatcattcataagaa-taggtgaagtataccaattaggggaacatagatgatttgaaagacctgatctcatctctctct 13005352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 14281662 - 14281481
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| | |||| ||||||||||  |||||| |||||  ||||||||||    
T  14281662 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcctaacttaagggattgattaggactatttt-gttaactatcgtgaaac 14281564  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
     ||||||  ||||||| ||| |||||||||| | | ||||| |||||  ||||  ||||||||||| |  | ||||||||||||    
T  14281563 aagagaatcattcataagaa-taggtgcagtatcccaattaggggaacatagatgattcgaaagacctgatgtcatctctctct 14281481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 22561305 - 22561124
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||| |||||||||||||||||| || ||||| | |||||| |||||||||| |||||| |||||||| |  |||||| ||| |  ||||||||||    
T  22561305 aagattatgagatcacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaagactatttt-gttgactatcgtgaaac 22561207  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
     ||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||| ||||||| |  ||||||||||||||    
T  22561206 cagaaaatcattcataagaa-taggtgcagtataccaattaggggaacgtagatgatttgaaagacctgatctcatctctctct 22561124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 377
Target Start/End: Complemental strand, 3826744 - 3826598
Alignment:
Q  228 ctttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtg 327  Q
    ||||||||||||| ||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| |||||||||    
T  3826744 ctttttatgcaca-caaacctactgcctcaggcacttataaaatttacacatcctaaatattaactttattgctaagttgagattaacacagtccttgtg 3826646  T
Q  328 gaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    || || ||| ||||  |||||||| ||||| ||||| |||||||||||||    
T  3826645 gatacgaac-ttatcttattacttcgatag-ttttagtacacttgctaaa 3826598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 5259957 - 5260021
Alignment:
Q  51 agaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaa 116  Q
    |||| ||||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||||||||    
T  5259957 agaagagggtcctaagtcaagggattgattagggctatttt-gttaaccatcgtgaaactagagaa 5260021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 160 - 382
Target Start/End: Original strand, 24371348 - 24371570
Alignment:
Q  160 agagaattcgaaagacgtagtctcatctctctctatcttttctaaacaa--ctttattttctgatatttactttttatgcacaacaaacctaccgcctcg 257  Q
    |||| |||||||| || ||||||||||||||  ||| ||||| ||||||  |||||||||||| ||||||||||| ||||| | |||| |||| |||| |    
T  24371348 agaggattcgaaatacctagtctcatctctccatatattttccaaacaaatctttattttctgttatttactttt-atgca-atcaaatctactgcctag 24371445  T
Q  258 ggca--ctaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtggaaacaaactttattatattactttgat 355  Q
    ||||  | |||||| |||||||||| ||  | |||||| | ||| | ||||||||||||||| ||||| ||||| || |||||  || |||||||| |||    
T  24371446 ggcaaacaaaataa-tttacacatcttagataataacaattttgctaaattgagattaacacagtcctcgtggatacgaacttatttttattacttcgat 24371544  T
Q  356 agtttttaatacacttgctaaatttct 382  Q
    |  ||||| |||||||| |||| ||||    
T  24371545 a-attttagtacacttgttaaaattct 24371570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 11402239 - 11402420
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  | || | | |||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  11402239 aagattattagaacacctaaggaattaggggatatagtataagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 11402337  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||| ||||||| ||| |||||||||| ||| ||||| || ||  ||||  | ||||||||| |  ||||||||||||||    
T  11402338 tagaaaaacattcataagaa-taggtgcagtataccaattagggaaacatagatgaatcgaaagacctgatctcatctctctct 11402420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 377
Target Start/End: Original strand, 34502529 - 34502692
Alignment:
Q  210 tttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgag 309  Q
    ||||||||||| |||||||||| | |||||| ||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | |||||    
T  34502529 tttattttctgttatttactttat-tgcaca-caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgag 34502626  T
Q  310 attaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    |||||||| ||||| ||||| || ||| ||||| || ||||| ||||| ||||| |||||||||||||    
T  34502627 attaacacagtcctcgtggatacgaac-ttattttactacttcgatag-ttttagtacacttgctaaa 34502692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 12979960 - 12979903
Alignment:
Q  325 gtggaaacaaactttattatattactttgatagtttttaatacacttgctaaatttct 382  Q
    |||||||||||||| ||| |||||||| ||| ||||||| ||||||||||||||||||    
T  12979960 gtggaaacaaacttaattgtattacttcgatggtttttagtacacttgctaaatttct 12979903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 24371260 - 24371311
Alignment:
Q  13 aatattagatcacctaaggaattatggactgtaatctgagaaaagggtccta 64  Q
    |||||||||||||||||||||||| |||||||||||||| || ||| |||||    
T  24371260 aatattagatcacctaaggaattagggactgtaatctgataagaggatccta 24371311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 10289954 - 10290146
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||||| |||||| | |||||||||| || | ||||||||||  |||||| |||||  |||||| |||    
T  10289954 aagattattagaccacctaaggaattaggggctgtaatttgagaagaaggtcctaagttaaaggattgattaggactatttt-gttaactatcgtggaac 10290052  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    || | ||  ||||||| ||| || ||||||| ||| ||||  |||||  ||||  ||||||||||| |  ||| |||||||| ||| ||| ||||    
T  10290053 taaaaaataattcataagaa-taagtgcagtataccaattcggggaacatagatgattcgaaagacctgatcttatctctctttatatttactaa 10290146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 7128286 - 7128382
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactag 112  Q
    ||||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| ||||||||||  |||||| |||||  ||||| |||||||    
T  7128286 tattagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtaaaactag 7128382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 338
Target Start/End: Original strand, 5260023 - 5260119
Alignment:
Q  242 caaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtggaaacaaactt 338  Q
    |||| |||| |||||||||||||||  |||||||||||||||  |  ||||  ||||| | ||||||||||||||  ||||||||||| || |||||    
T  5260023 caaaactactgcctcgggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacatagtccttgtggatacgaactt 5260119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 377
Target Start/End: Complemental strand, 5618055 - 5617985
Alignment:
Q  305 ttgagattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||||||| ||||| ||||| |||||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  5618055 ttgagattaacacagtcctcgtggatacaaac-ttattttattacttcgatag-ttttagtacacttgctaaa 5617985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 377
Target Start/End: Original strand, 14969897 - 14970050
Alignment:
Q  221 atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggt 320  Q
    |||| ||||||||||||||| |||| |||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||  ||    
T  14969897 atatatactttttatgcaca-caaatctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacatagt 14969995  T
Q  321 ccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    |||  |||| || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  14969996 cctcatggatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 14970050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 19475989 - 19476147
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| ||  ||||| |  |||| |||||||||| |||||| | ||||||||  |||||| |||||  ||||| |||||||||    
T  19475989 tattagaccacctaaggaattaggggttgtaaccctagaagagggtcctaactcaagggactgattaggactatttt-gttaactatcgtaaaactagag 19476087  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagac 175  Q
    |   ||||| | ||| |||||||||| ||| ||||| |||||  ||||  |||||||||||    
T  19476088 actcattcacaagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagac 19476147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 332
Target Start/End: Complemental strand, 5738003 - 5737881
Alignment:
Q  209 ctttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    ||||||||| || |||||| |||| ||||| | |||| |||| ||||| |||| ||||  |||||||||||||||  |  ||||  ||||| | ||||||    
T  5738003 ctttattttatgttatttaatttt-atgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctagatattaaccttattgctaaattga 5737905  T
Q  309 gattaacacggtccttgtggaaac 332  Q
    ||||||||| ||||||| ||||||    
T  5737904 gattaacacagtccttgcggaaac 5737881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 303 - 377
Target Start/End: Original strand, 10290260 - 10290334
Alignment:
Q  303 aattgagattaacacggtccttgtggaaacaaactttattatattactttgata-gtttttaatacacttgctaaa 377  Q
    ||||||||||||||| ||||| ||||| |||||| ||||| |||||||| ||||  |||||| |||||||||||||    
T  10290260 aattgagattaacacagtcctcgtggatacaaac-ttattttattacttcgatacatttttagtacacttgctaaa 10290334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 28111908 - 28111837
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgatta 81  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| ||||||||    
T  28111908 aagattattagaccacctaaggaattaggggatgtagtttgagaagagggtcctaactcaagggattgatta 28111837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 28230581 - 28230647
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgatta 81  Q
    ||||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| ||||||||    
T  28230581 tattagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgatta 28230647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 24410285 - 24410353
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagg 83  Q
    ||||||| |||||||||||||| || |||||| || || | |||||||| | |||||| ||||||||||    
T  24410285 tattagaccacctaaggaattaggggctgtaaccttaggagagggtcctgactcaagggattgattagg 24410353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 10 - 378
Target Start/End: Original strand, 21915102 - 21915472
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||| ||||||||||| |||||||||||| ||||||||||     
T  21915102 aagaatattagatcacctaaggaattagggactgtaatctgagaagagggtcataagtcaagggattgattagggctattttagttaaccatcgtgaaat 21915201  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaac 209  Q
    |||||||||||||||| ||| |||||| ||||||| ||||| ||||| | | || ||||||||||| ||||| ||||||||||||||||||| || |||     
T  21915202 tagagaaatattcataagaaataggtgtagtgtaccaattaggggaactcaaaggattcgaaagacctagtcacatctctctctatcttttccaatcaat 21915301  T
Q  210 tttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaa-tttacacatcctatttcataacactattgtttaattg 307  Q
     |||||||||  ||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||  ||||| ||| |||    
T  21915302 cttattttctattatttactttttatgcacaacaaacctactgcctcgggcactgaaataaactttacacatcctatttcataacgttattgcttacttg 21915401  T
Q  308 agattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaat 378  Q
    ||||||||||||||||  || |||| ||||| ||| | ||||||  |||||||||| ||||||||||||||    
T  21915402 agattaacacggtcctcatgaaaacgaacttaattgttttacttcaatagtttttagtacacttgctaaat 21915472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 10 - 356
Target Start/End: Original strand, 31575395 - 31575744
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaa-ggtattgattagggttattttagttaatcatcgtgaaa 108  Q
    ||||||||||||| ||||| |||||||  ||||||||| |||||| || |||| ||||||| || ||||||||| | |||||||||||| ||||||||||    
T  31575395 aagaatattagattacctagggaattagagactgtaatttgagaagagagtcccaagtcaaagggattgattagagctattttagttaaccatcgtgaaa 31575494  T
Q  109 ctagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaac-a 207  Q
    ||||||||||||||||| ||| ||| |||||||||| || || ||||| | | || ||||||||||| ||||||||||||||  ||||||||| |||| |    
T  31575495 ctagagaaatattcatatgaaatagctgcagtgtaccaaataggggaagtcataggattcgaaagacctagtctcatctctccatatcttttccaaacaa 31575594  T
Q  208 actttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaat 305  Q
    |||||||||| ||  ||||| |||||   |||| |||||| ||| |||||||||||| ||| ||||||||| ||||||  | |||||  ||||||| |||    
T  31575595 actttattttttgtttattttcttttctggcac-acaaacttactgcctcgggcactaaaaaaaatttacatatcctagataataacgttattgttcaat 31575693  T
Q  306 tgagattaacacggtccttgtggaaacaaactttattatattactttgata 356  Q
    ||||||||| ||||||||||||||||| |||||  || |||||||| ||||    
T  31575694 tgagattaatacggtccttgtggaaacgaacttatttttattacttcgata 31575744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 22937079 - 22936901
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||| | |||| ||||||||||  |||||| |||||  ||||||||||    
T  22937079 aagaatattagctcacctaaggaattagggactgtaatctgagaagagggtcctaactaaagggattgattaggactatttt-gttaactatcgtgaaac 22936981  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctc 190  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  | ||  | ||||||||| ||||||||||||||    
T  22936980 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacattgatgactcgaaagacctagtctcatctctc 22936901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 377
Target Start/End: Original strand, 7625088 - 7625452
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| ||||||||||||||  | ||||| | |||||| || ||||||| |||||| ||||||||||| |||||| |||||  |||||| |||||||     
T  7625088 tattagaccacctaaggaattagaggctgtagtttgagaagagagtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactagaa 7625186  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatcttttctaaa-caactt 211  Q
    ||  ||| |||  || |||||| ||| ||| ||||| |||||  | ||  ||| ||||||| |  |||||||||||||  | ||||||| ||| | |  |    
T  7625187 aatcattaatacaaa-taggtgtagtataccaattaggggaacatcgatgatttgaaagacctgatctcatctctctccttgtcttttccaaaactatct 7625285  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaat-aaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    ||||||||| ||||||||||||||||| | |||| |||| |||||||||||||||  ||||||||||||||||  |  ||||  ||||| | ||||||||    
T  7625286 tattttctgttatttactttttatgca-atcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgaga 7625384  T
Q  311 ttaacacggtccttgtggaaacaaactttattatattactttgat-agtttttaatacacttgctaaa 377  Q
    ||||||| ||||| ||||| || ||||||||| || ||||| |||   |||||| |||||||||||||    
T  7625385 ttaacacagtcctcgtggatacgaactttattttactacttcgatgcatttttagtacacttgctaaa 7625452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 232
Target Start/End: Original strand, 42062902 - 42063125
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||| |||||||||| |||||  ||||||||||  |||||| |||||  |||||| |||    
T  42062902 aagaatattagttcacctaaggaattagggactgtaatatgagaagagggtcctaactcaagagattgattaggactatttt-gttaactatcgtggaac 42063000  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctc-tctatcttttctaaa--c 206  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| || ||  ||||  |||| |||||| |||||||||||||| | ||| ||||| |||       
T  42063001 tagaaaatcattcataagaa-taggtgcagtataccaattagggaaacatagatgattcaaaagacctagtctcatctctcatatatattttccaaaact 42063099  T
Q  207 aactttattttctgatatttactttt 232  Q
    | |||||||||||| |||||||||||    
T  42063100 atctttattttctgttatttactttt 42063125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 21335840 - 21335662
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| |||||||||||||||||||||| || ||||| | |||||| | ||| ||||||||| | ||||||||||  |||||| |||||  |||||| |||    
T  21335840 aagattattagatcacctaaggaattaggggctgtagtttgagaagacggttctaagtcaaaggattgattaggactatttt-gttaactatcgtggaac 21335742  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctc 190  Q
    |||||||  ||||||| ||| |||||||||| ||||||||| |||||  ||||  ||||||||||| | ||||||||||||    
T  21335741 tagagaatcattcataagaa-taggtgcagtatacaaattaggggaacatagatgattcgaaagacttggtctcatctctc 21335662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 41876906 - 41876714
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  41876906 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 41876808  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| || |||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  41876807 tagaaaattattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 41876714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 21332822 - 21332641
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| |||||||||| ||||||||||| || ||||| | |||||| ||||| ||||||||| | ||||||||||  ||||||| ||||  |||||| |||    
T  21332822 aagattattagatcatctaaggaattaggggctgtagtttgagaagagggttctaagtcaatgaattgattaggactatttta-ttaactatcgtggaac 21332724  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||||||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||    
T  21332723 tagagaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 21332641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 34831744 - 34831936
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  34831744 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 34831842  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| || |||||||| ||| |||||||| | ||| ||||| ||||| | |||  ||||||||||| || ||||||||||||  || ||||||||    
T  34831843 tagaaaattattcataagaa-taggtgcattataccaattaggggaactcagaagattcgaaagacctaatctcatctctcttcatattttctaa 34831936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 377
Target Start/End: Original strand, 2453469 - 2453633
Alignment:
Q  210 tttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgag 309  Q
    ||||||||||| |||||||||||||||||| | |||||||| ||||| |||||| |  ||||||||| ||||||  |  ||||  ||||| | | |||||    
T  2453469 tttattttctgttatttactttttatgcac-ataaacctactgcctcaggcacttataaaatttacatatcctaaatattaactttattgctaagttgag 2453567  T
Q  310 attaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    |||||||| ||||| ||||| |||||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  2453568 attaacacagtcctcgtggatacaaac-ttattttattacttcgatag-ttttagtacacttgctaaa 2453633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 175
Target Start/End: Complemental strand, 18239638 - 18239474
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||| ||||| ||  | || ||||| ||  |||||||||||||||| ||||||||||| |||||| |||||| ||||||||||    
T  18239638 aagagtattagaccacctaagaaattaggggttttactctgacaagggggtcctaagtcaagggattgattagggctatttt-gttaattatcgtgaaac 18239540  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagac 175  Q
    |||||||  ||||  | ||| ||||||||||  || ||||| ||||| | |||| |||||||||||    
T  18239539 tagagaatcattcgaaagaaataggtgcagtacaccaattaggggaactcagaggattcgaaagac 18239474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 26752843 - 26752662
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  26752843 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 26752745  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| |||  ||||||||| ||| ||||| |||||  || |  ||||||||||| |  ||||||||||||||    
T  26752744 tagaaaatcattcataagaa-aaggtgcagtataccaattaggggaacataaatgattcgaaagacctgatctcatctctctct 26752662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 31863695 - 31863876
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || || || | |||||| ||| |||||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  31863695 aagattattagaccacctaaggaattaggggctatagtttgagaagaggatcctaactcaagggattgattatgactatttt-gttaactatcgtggaac 31863793  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||  ||||| |||||  ||||  ||||||||||| |||||||||||||||||    
T  31863794 tagaaaatcattcataagaa-taggtgcagtatatcaattaggggaacatagatgattcgaaagacctagtctcatctctctct 31863876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 37215025 - 37215205
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  37215025 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattatgactatttt-gttaactatcgtggaac 37215123  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||| | ||| ||||| ||||| |||||  ||||||||||| || | ||||||||||||    
T  37215124 tagaaaatcattcataagaa-taggtgcaatataccaatta-gggaacttagatgattcgaaagacctaatttcatctctctct 37215205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 204
Target Start/End: Complemental strand, 4099654 - 4099467
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| ||||||| |||||| || ||||| | |||||| |||||| |||||||||| |||||||| |  |||||| | |||  |||||| |||||||     
T  4099654 tattagaccacctaaagaattaggggctgtagtttgagaagagggtcttaagtcaagggattgattatgactatttt-gctaactatcgtgcaactagaa 4099556  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| ||||||||||| |||  || ||||||||    
T  4099555 aatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctagtctcatctttcttcatattttctaa 4099467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 377
Target Start/End: Original strand, 3195283 - 3195432
Alignment:
Q  225 ttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtcctt 324  Q
    |||||||||||||||| ||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| |||||     
T  3195283 ttactttttatgcaca-caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctc 3195381  T
Q  325 gtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||| || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  3195382 gtggatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 3195432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 377
Target Start/End: Original strand, 19686356 - 19686521
Alignment:
Q  210 tttattttctgatatttactttttat-gcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    ||||||||||| |||||||||||||| ||||| ||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||    
T  19686356 tttattttctgttatttactttttattgcaca-caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttga 19686454  T
Q  309 gattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||| ||||| ||||| || ||| ||||| || ||||| ||||| ||||| |||||||||||||    
T  19686455 gattaacacagtcctcgtggatacgaac-ttattttactacttcgatag-ttttagtacacttgctaaa 19686521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 18952673 - 18952854
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  18952673 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattatgactatttt-gttaactatcgtggaac 18952771  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||||||  ||||||| ||| || ||||||| ||| ||||| |||||  ||||  ||| ||||||  |  ||||||||||||||    
T  18952772 tagagaatcattcataagaa-tatgtgcagtataccaattaggggaacatagatgatttgaaagatttgatctcatctctctct 18952854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 20055754 - 20055935
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| | |||||||| ||| || |||||||||| ||||||| |||||  |||||| |||    
T  20055754 aagattattagaccacctaaggaattaggggttgtagtttgagaagacggtcctaactcacgggattgattaggattatttt-gttaactatcgtggaac 20055852  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  |||||| |||||||    
T  20055853 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctcatctcatatctctct 20055935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 332
Target Start/End: Complemental strand, 14016267 - 14015958
Alignment:
Q  23 cacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattc 122  Q
    |||||||| ||||| ||  |||| | |||||| |||||||||| |||||| ||||||||||| |||||| |||||  | |||| ||||||| ||  |||     
T  14016267 cacctaagaaattaggggttgtagtttgagaagagggtcctaactcaagggattgattagggctatttt-gttaactaccgtggaactagaaaatcatta 14016169  T
Q  123 ataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatcttttctaaa-caactttattttct 219  Q
    ||| ||| |||||||| | ||| ||||| |||||  | ||  ||||||||||| |  |||||||||||||  | ||||||| ||| | |  |||||||||    
T  14016168 atacgaa-taggtgcactataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatcttattttct 14016070  T
Q  220 gatatttactttttatgcacaacaaacctaccgcctcgggcactaaat-aaatttacacatcctatttcataacactattgtttaattgagattaacacg 318  Q
    | ||||||  ||| ||||| | |||| |||| |||||||||||||||  ||||||||||||||||  |  ||||  ||||| | |||||||||||||||     
T  14016069 gttatttaaattt-atgca-atcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacaca 14015972  T
Q  319 gtccttgtggaaac 332  Q
    ||||| ||||||||    
T  14015971 gtcctcgtggaaac 14015958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 191
Target Start/End: Original strand, 17664532 - 17664710
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||||||| |||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  17664532 aagattattagaccacctaaggaattaggggttgtaatcttagaagagggtcctaactcaagggattgattatgactatttt-gttaactatcgtggaac 17664630  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctct 191  Q
    ||| |||  || |||||  | |||||||||| ||| ||||| |||||  |||| ||||| |||||| |  ||||||||||||    
T  17664631 tagtgaatcatacatag--aataggtgcagtataccaattaggggaacatagataattcaaaagacctgatctcatctctct 17664710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 377
Target Start/End: Original strand, 30764430 - 30764576
Alignment:
Q  228 ctttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtg 327  Q
    ||||||||||||| ||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| ||||| |||    
T  30764430 ctttttatgcaca-caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtg 30764528  T
Q  328 gaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    || || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  30764529 gatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 30764576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 377
Target Start/End: Complemental strand, 34652681 - 34652535
Alignment:
Q  228 ctttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtg 327  Q
    ||||||||||||| ||||||||| | ||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| ||||| |||    
T  34652681 ctttttatgcaca-caaacctactgtctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtg 34652583  T
Q  328 gaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    || |||||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  34652582 gatacaaac-ttattttattacttcgatag-ttttagtacacttgctaaa 34652535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 175
Target Start/End: Complemental strand, 41306669 - 41306506
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | ||| || |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  41306669 aagattattagaccacctaaggaattaggggctgtagtttgaaaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 41306571  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagac 175  Q
    |||| ||  |||||||  || |||||||||| ||| ||||| |||||  ||||  |||||||||||    
T  41306570 tagaaaatcattcata-aaaataggtgcagtataccaattaggggaacatagatgattcgaaagac 41306506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 7270996 - 7271188
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||| ||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| |||||||||   |||||| |||||  ||| || |||    
T  7270996 aagattatcagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagaactatttt-gttaactatcatggaac 7271094  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  |||||| |||||  || ||||||||    
T  7271095 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatttctcttcatattttctaa 7271188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 12058629 - 12058453
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| ||||||||||  |||||| |||||  ||||| ||||||| |    
T  12058629 tattagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtaaaactaggg 12058531  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |    |||| | ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| ||  |||||||||||||    
T  12058530 actctttcacaagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 12058453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 374
Target Start/End: Original strand, 30761611 - 30761754
Alignment:
Q  228 ctttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtg 327  Q
    ||||||||||||| ||||||||| ||||| | |||| |  ||||||||||||||||  |  ||||  ||||||| | ||||||||||||| ||||| |||    
T  30761611 ctttttatgcaca-caaacctactgcctcagacacttataaaatttacacatcctagatattaactttattgttaagttgagattaacacagtcctcgtg 30761709  T
Q  328 gaaacaaactttattatattactttgatagtttttaatacacttgct 374  Q
    || || ||| ||||| |||||||| ||||| ||||| ||||||||||    
T  30761710 gatacgaac-ttattttattacttcgatag-ttttagtacacttgct 30761754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 34133120 - 34132944
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| ||||||||||  |||||| |||||  ||||| ||||||| |    
T  34133120 tattagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtaaaactagtg 34133022  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |    |||| | ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| ||  |||||||||||||    
T  34133021 actctttcacaagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 34132944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 34143351 - 34143175
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| ||||||||||  |||||| |||||  ||||| ||||||| |    
T  34143351 tattagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtaaaactagtg 34143253  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |    |||| | ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| ||  |||||||||||||    
T  34143252 actctttcacaagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 34143175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 18765787 - 18765654
Alignment:
Q  7 tcgaagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtga 106  Q
    ||||||||| ||||| ||| |||||||||| |   ||||| || | || ||||  |||| |||||| ||||||||    |||||||||||| |||||| |    
T  18765787 tcgaagaatgttagaccacttaaggaattaggagttgtaagctaacaagagggatctaactcaagggattgattataactattttagttaaccatcgtaa 18765688  T
Q  107 aactagagaaatattcataggaagtaggtgcagt 140  Q
    |||||||||| ||| |||||||| ||||||||||    
T  18765687 aactagagaagtatgcataggaaataggtgcagt 18765654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 377
Target Start/End: Original strand, 19689739 - 19689904
Alignment:
Q  210 tttattttctgatatttacttttta-tgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| ||||| |||||| |  |||| |||||||||||  |  ||||  ||||| | | ||||    
T  19689739 tttattttctgttatttactttttattgcac-acaaacctactgcctcaggcacttataaaatctacacatcctagatattaactttattgctaagttga 19689837  T
Q  309 gattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||| || || ||||| || ||| ||||| || ||||| ||||| ||||| |||||||||||||    
T  19689838 gattaacacagtgctcgtggatacgaac-ttattttactacttcgatag-ttttagtacacttgctaaa 19689904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 40583226 - 40583408
Alignment:
Q  7 tcgaagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtga 106  Q
    ||||||| ||||||| |||||||||||||| ||  |||| | | |||| |||||| ||| |||||| ||||||||||  |||||| |||||  ||||||     
T  40583226 tcgaagattattagaccacctaaggaattaggggttgtagtttaagaagagggtcataactcaagggattgattaggactatttt-gttaactatcgtgg 40583324  T
Q  107 aactagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctct 191  Q
    || || ||||  ||||||| ||| |||||||||| ||| ||||| | |||  | ||| ||||||||||| ||  |||||||||||    
T  40583325 aattatagaatcattcataagaa-taggtgcagtataccaattaggagaacatcgaggattcgaaagacctaaactcatctctct 40583408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 2837284 - 2837359
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggt 85  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| ||||||||||||    
T  2837284 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcctaaatcaagggattgattagggt 2837359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 202
Target Start/End: Original strand, 22131223 - 22131400
Alignment:
Q  23 cacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattc 122  Q
    |||||||||||||| |   |||| | |||||| |||||||||| |||||  ||||||||||  |||||| |||||  |||||  ||||||||||  ||||    
T  22131223 cacctaaggaattaggtgttgtagtttgagaagagggtcctaactcaagagattgattaggaatatttt-gttaactatcgtagaactagagaatcattc 22131321  T
Q  123 ataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttct 202  Q
    ||| ||| |||||||||| ||| ||||| |||||  | ||  ||||||||||| |  ||||||||||||| || ||||||    
T  22131322 atacgaa-taggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccatattttct 22131400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 193
Target Start/End: Original strand, 23044130 - 23044303
Alignment:
Q  18 tagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaa 117  Q
    |||| |||||||||||||| ||  ||| | |  |||| |||||||||| |||||| |||||||| | ||||||| |||||  ||||||||||||  |||     
T  23044130 tagaccacctaaggaattaggggatgtgaccctagaagagggtcctaactcaaggcattgattaagattatttt-gttaactatcgtgaaactactgaat 23044228  T
Q  118 tattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
     ||||||| ||| |||||||||| ||| ||||| |||||  ||||  |||| |||||| ||  |||||||||||||    
T  23044229 cattcataagaa-taggtgcagtataccaattaggggaacatagatgattcaaaagacctaaactcatctctctct 23044303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 12087943 - 12088119
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| ||  ||||| |  |||| |||||||||| |||||| ||||||||||  |||||| |||||  ||||| ||||||| |    
T  12087943 tattagaccacctaaggaattaggggttgtaaccctagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtaaaactagtg 12088041  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |    |||| | ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| ||  |||||||||||||    
T  12088042 actctttcacaagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 12088119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 372
Target Start/End: Original strand, 10629453 - 10629555
Alignment:
Q  269 aatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaataca 368  Q
    |||||||||||||||  | ||||   ||||||| ||||||||||||||| |||||  |||| |||||| ||||| |||||||| |||||| |||  ||||    
T  10629453 aatttacacatcctaaataataattttattgttaaattgagattaacacagtcctcatggatacaaac-ttattttattacttcgatagtatttggtaca 10629551  T
Q  369 cttg 372  Q
    ||||    
T  10629552 cttg 10629555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 26895746 - 26895565
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| ||||||||||||||  | ||||| | |||||| || ||| ||| |||||| ||||||||||  |||||| |||||| |||||  |||    
T  26895746 aagattattagaccacctaaggaattagaggctgtagtttgagaagagagtcttaactcaagggattgattaggactatttt-gttaattatcgttgaac 26895648  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    || | ||  ||||||| ||| ||||||||   ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||    
T  26895647 taaaaaatcattcataagaa-taggtgcaacataccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 26895565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 377
Target Start/End: Complemental strand, 28562288 - 28562140
Alignment:
Q  226 tactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttg 325  Q
    |||||||||| |||| ||||||||| ||||| |||||| |  || |||||||||||||  |  ||||  ||||| | | ||||||||||||| ||||| |    
T  28562288 tactttttatacaca-caaacctactgcctcaggcacttataaagtttacacatcctagatactaactttattgctaagttgagattaacacagtcctcg 28562190  T
Q  326 tggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    |||| || |||  |||| |||||||| ||||| ||||| |||||||||||||    
T  28562189 tggatacgaac-ctattttattacttcgatag-ttttagtacacttgctaaa 28562140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 377
Target Start/End: Complemental strand, 28565856 - 28565708
Alignment:
Q  226 tactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttg 325  Q
    |||||||||| |||| ||||||||| ||||| |||||| |  || |||||||||||||  |  ||||  ||||| | | ||||||||||||| ||||| |    
T  28565856 tactttttatacaca-caaacctactgcctcaggcacttataaagtttacacatcctagatactaactttattgctaagttgagattaacacagtcctcg 28565758  T
Q  326 tggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    |||| || |||  |||| |||||||| ||||| ||||| |||||||||||||    
T  28565757 tggatacgaac-ctattttattacttcgatag-ttttagtacacttgctaaa 28565708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 26907592 - 26907416
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| ||||||||||||||  |  ||||| |  |||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||  |||||  |    
T  26907592 tattagaccacctaaggaattacaggttgtaaccctagaagagggtcctaactcaagggattgattatgactatttt-gttaactatcgtagaactaatg 26907494  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| ||  |||||||||||||    
T  26907493 aatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 26907416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 17748425 - 17748521
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactag 112  Q
    ||||||||||| |||| ||||| || |||||| |  |||| |||||||||| |||||| ||||||||||  |||||| |||||  ||||| |||||||    
T  17748425 tattagatcacttaagaaattaggggctgtaaccctagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgttaaactag 17748521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 33552109 - 33552264
Alignment:
Q  18 tagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaa 117  Q
    |||| ||| |||||||||| ||  |||| | |||||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||| || |||| ||     
T  33552109 tagaccacttaaggaattaggggttgtagtttgagaagagggtcctaactcaagggattgattatgactatttt-gttaactatcgtggaattagaaaat 33552207  T
Q  118 tattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagac 175  Q
     ||||||| ||| |||||||||| ||| ||||| |||||  ||||  |||||||||||    
T  33552208 cattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagac 33552264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 10 - 378
Target Start/End: Complemental strand, 37739901 - 37739534
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| |||||||||||||||||||||| |||| ||||||||| || ||||||||||||||||| ||||||||||| |||||||| ||| |||||||||||    
T  37739901 aagattattagatcacctaaggaattagggacagtaatctgataagagggtcctaagtcaagggattgattagggctattttagctaaccatcgtgaaac 37739802  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaac 209  Q
    |||||||||||||||| ||  |||||||||||||| |||||  |||| |  ||  ||||||||||| |||||   |||| ||||||||||||||||||||    
T  37739801 tagagaaatattcataagacataggtgcagtgtaccaattagaggaactctgatgattcgaaagacctagtc---tctccctctatcttttctaaacaac 37739705  T
Q  210 tttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaa-tttacacatcctatttcataacactattgtttaattg 307  Q
    ||||||||||| || ||||||||||||| |||  ||||||| ||||| |||||| ||||||| |||||||||||||||||||| | |||||||||| |||    
T  37739704 tttattttctgctacttactttttatgcgcaaagaacctactgcctcaggcactaaaataaactttacacatcctatttcatatcgctattgtttacttg 37739605  T
Q  308 agattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaat 378  Q
    |||||||||||||||| |||||||| ||||| ||| |||||||| ||||||||||||||||||||||||||    
T  37739604 agattaacacggtcctcgtggaaacgaacttaattgtattacttcgatagtttttaatacacttgctaaat 37739534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 7 - 283
Target Start/End: Complemental strand, 22172519 - 22172242
Alignment:
Q  7 tcgaagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtga 106  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| || ||||||||||||  ||||| |    
T  22172519 tcgaagaatattagttcacctaaggaattagggactgtaatctgagaagagggtcctaagtcaagggattgattatggctattttagttaactatcgtta 22172420  T
Q  107 aactagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaac 206  Q
    || |||||||||||| ||||| | ||||| |||||| | || || |  || | |||| |||| |||||| ||||||||||||||| ||||||||| |||     
T  22172419 aattagagaaatatttatagggaataggtacagtgtgccaaataggaaaactcagaggattcaaaagacctagtctcatctctctatatcttttccaaaa 22172320  T
Q  207 aa-ctttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatccta 283  Q
    || |||||||||| |  |||||||  ||||||||||  |||| ||| |||||||||||||||  |||||||||||||||    
T  22172319 aatctttattttccgtctatttac-atttatgcacacaaaacatactgcctcgggcactaaaataatttacacatccta 22172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 231 - 377
Target Start/End: Complemental strand, 48013311 - 48013163
Alignment:
Q  231 tttatgcacaacaaacctaccgcctcgggcactaaa-taaa-tttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtgg 328  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||| |||| ||||||||||||| |||||||| |||| |||||||||||||| ||||    
T  48013311 tttatgcacaacaaacctactgcctcgggcactaaaataaactttacgcatcatatttcataacacaattgtttacttgaaattaacacggtcctcgtgg 48013212  T
Q  329 aaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  48013211 aaacaaactttattatattacttcgatagtttttagtacacttgctaaa 48013163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 377
Target Start/End: Original strand, 33926957 - 33927319
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| ||||| |||||||| || ||||| | | |||| |||||||||| |||||| |||||||| || |||||| |||||  |||||| |||||||     
T  33926957 tattagaccacctgaggaattaggggctgtagttttagaagagggtcctaactcaagggattgattatggctatttt-gttaactatcgtggaactagaa 33927055  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatcttttctaaa-caactt 211  Q
    ||  ||| ||| ||| |||||||||| ||| ||||| |||||  | ||  ||||||||||| |  |||||||||||||  | ||||||| ||| | |  |    
T  33927056 aatcattaatacgaa-taggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatct 33927154  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaat-aaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    |||||| || ||||||||||||||||||| ||| ||||| |||||||||||||||  ||||||||||||||||  |  ||||  ||||| | ||||||||    
T  33927155 tattttatgttatttactttttatgcacaccaa-cctactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgaga 33927253  T
Q  311 ttaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||| ||||| ||||| || ||||| ||| |||||||| ||||| ||||| |||||||||||||    
T  33927254 ttaacacagtcctcgtggatacgaacttaattttattacttcgatag-ttttagtacacttgctaaa 33927319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 5677551 - 5677448
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||||||||||||||| |||||||||| ||||||||||||||||| | ||||||||||||||| ||||||||||  |||||||||||  |||||||||||    
T  5677551 aagaatattagatcacttaaggaattagggactgtaatctgagaagatggtcctaagtcaagggattgattaggactattttagttagccatcgtgaaac 5677452  T
Q  110 taga 113  Q
    ||||    
T  5677451 taga 5677448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 351
Target Start/End: Complemental strand, 15405218 - 15404882
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||| | ||||||||||| |||||| |||||  |||||| |||||||     
T  15405218 tattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaatggattgattagggctatttt-gttaactatcgtggaactagaa 15405120  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaacaactt 211  Q
    ||  ||| |||  || |||||||||| ||  ||||| ||||| |||||  ||||||||||| |  |||||||||||||  | |||||| | |||| |  |    
T  15405119 aatcattaata-caaataggtgcagtatatcaattaggggaacttagatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatct 15405021  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    |||||| || |||||||||||||||||| || ||||||| |||||| ||||| ||| ||||||||||||||||  |  ||||  ||||| | ||||||||    
T  15405020 tatttt-tgttatttactttttatgcac-accaacctactgcctcgtgcactaaaacaaatttacacatcctagatattaacgttattgctaaattgaga 15404923  T
Q  311 ttaacacggtccttgtggaaacaaactttattatattactt 351  Q
    ||||||| ||| | ||||| || ||||| ||| ||||||||    
T  15404922 ttaacacagtcgtcgtggatacgaacttaattttattactt 15404882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 338
Target Start/End: Original strand, 53094487 - 53094818
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||| ||| ||  |||| | |||||| ||||||||||||||||| ||||||||||  |||||| |||||||||||||||||    
T  53094487 aagagtattagaccacctaaggagttaggggttgtactatgagaagagggtcctaagtcaagggattgattaggcctatttt-gttaatcatcgtgaaac 53094585  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcg-aaagacgtagtctcatctctctc--tatcttttc--taa 204  Q
    |||||||  |||| || ||| |||||||||| ||| ||||| ||||| |||||| ||| | |||||| |  |||||||||||||  |||||||||   ||    
T  53094586 tagagaatcattcgtaagaaataggtgcagtataccaattaggggaacttagaggatttgaaaagacctgatctcatctctctccttatcttttccaaaa 53094685  T
Q  205 acaactttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgttta 303  Q
    | |  |||||||||||  ||||||  ||||||||| |  ||| |||| | ||| | |||||||  |||||||||||||||| |  ||||  ||||| | |    
T  53094686 atatatttattttctgtttattta-attttatgca-ataaaaactactgtctcagacactaaaataatttacacatcctatatattaaccatattgctaa 53094783  T
Q  304 attgagattaacacggtccttgtggaaacaaactt 338  Q
    |||||||||||||| |||| |||||| || |||||    
T  53094784 attgagattaacacagtccctgtggatacgaactt 53094818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 328
Target Start/End: Complemental strand, 34320059 - 34319740
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || || || | |||||| |||||||||| |||||| ||||||||||| |||||| |||||  |||||| ||     
T  34320059 aagattattagaccacctaaggaattaggggctttagtttgagaagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaat 34319961  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaac 206  Q
    |||| ||  ||| ||| ||| |||||||||| ||| ||||| |||||  | ||  ||||||||||| |  |||||||||||||  | |||||| | ||||    
T  34319960 tagaaaatcattaatacgaa-taggtgcagtataccaattaagggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaac 34319862  T
Q  207 aactttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaat 305  Q
     |  |||||||||| ||||||||||||||||| | |||| |||| | |||||||||| ||| ||||||||||||||||  |  ||||  ||||| | |||    
T  34319861 tatcttattttctgttatttactttttatgca-atcaaaactactgtctcgggcactaaaagaaatttacacatcctaaatattaaccttattgctaaat 34319763  T
Q  306 tgagattaacacggtccttgtgg 328  Q
    |||||||||||| ||||| ||||    
T  34319762 tgagattaacacagtcctcgtgg 34319740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 8877643 - 8877462
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||||||||||| |||||||| ||||| ||  ||| ||| ||||| || |||||||||||||| ||||||||||| |||||| ||||| |||||||||||    
T  8877643 aagaatattagaccacctaagaaattaggggttgtgatcggagaagagagtcctaagtcaagggattgattagggctatttt-gttaaccatcgtgaaac 8877545  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc 192  Q
    ||||||   ||||||| ||| |||||||||| ||| || || ||||| |||||  ||| ||||||| |  |||||||||||||    
T  8877544 tagagagtcattcataagaaataggtgcagtatactaaataggggaacttagatgatttgaaagacctgatctcatctctctc 8877462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 33408459 - 33408279
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  | || | |||||| ||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||    
T  33408459 aagattattagaccacctaaggaattaggggttatagtttgagaagagggtcctaagtcaagggattgattagggctatttta-ttaaccatcgtgaaac 33408361  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc 192  Q
    |||| ||  ||||||| ||| |||||||||| |||  |||| ||||| |||||| ||||||||||| ||  |||||| |||||    
T  33408360 tagaaaatcattcataagaa-taggtgcagtataccgattaggggaacttagaggattcgaaagacctaaactcatcactctc 33408279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 377
Target Start/End: Original strand, 56195507 - 56195875
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||| |||||| |||||  |||||| |||    
T  56195507 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaac 56195605  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaac 206  Q
    |||| ||  ||| ||| ||| |||||||||| ||| ||||| |||||  | ||  ||||||||||| |  |||||||||||||  | |||||| | ||||    
T  56195606 tagaaaatcattaatacgaa-taggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaac 56195704  T
Q  207 aactttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaat 305  Q
     |  |||||||||| ||||||   |||||||| | |||| |||| |||||||||||| ||| ||||||||||||||||  |  ||||  ||||| | |||    
T  56195705 tatcttattttctgttattta-aatttatgca-atcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaat 56195802  T
Q  306 tgagattaacacggtccttgtggaaacaaactttattatattactttgat-agtttttaatacacttgctaaa 377  Q
    ||||||||||||  |||| ||| | || ||||| ||| |||||||| |||   |||||| |||||||||||||    
T  56195803 tgagattaacacaatcctcgtgaatacgaacttaattttattacttcgatgcatttttagtacacttgctaaa 56195875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 18911478 - 18911656
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  18911478 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 18911576  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctc 190  Q
    |||||||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  |||| |||||| ||||||||||||||    
T  18911577 tagagaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcaaaagacctagtctcatctctc 18911656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 328
Target Start/End: Complemental strand, 44809097 - 44808778
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||| |||||| |||||  |||||| |||    
T  44809097 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaac 44808999  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaac 206  Q
    |||| ||  ||| ||| ||| |||||||| | ||| ||||| | |||  | ||  ||||||||||  |  |||||||| ||||  | |||||| | ||||    
T  44808998 tagaaaatcattaatacgaa-taggtgcaatataccaattaggagaacatcgatgattcgaaagatctgatctcatctttctccttgtcttttccaaaac 44808900  T
Q  207 aactttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaat 305  Q
     |  |||||||||| ||||||||||||||||| | |||| |||| |||||||||||| ||| ||||||||||||||||  |  ||||  ||||| | |||    
T  44808899 tatcttattttctgttatttactttttatgca-atcaaaactactgcctcgggcactaaaagaaatttacacatcctaaatattaaccttattgctaaat 44808801  T
Q  306 tgagattaacacggtccttgtgg 328  Q
    |||||||||||| ||||| ||||    
T  44808800 tgagattaacacagtcctcgtgg 44808778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 190
Target Start/End: Original strand, 5706376 - 5706550
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagg-gttattttagttaatcatcgtgaaactaga 113  Q
    |||||| ||||||||||||||| ||||||||||||||||| || ||||||| |||||| ||||||||||  ||||||| |||||  |||||| |||||||    
T  5706376 tattagctcacctaaggaattagggactgtaatctgagaagagtgtcctaactcaagggattgattaggacttatttt-gttaactatcgtggaactaga 5706474  T
Q  114 gaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctc 190  Q
     ||  ||||||| ||| |||||||||| ||| ||||| |||||  | ||  | ||||||||| ||||||||||||||    
T  5706475 aaatcattcataagaa-taggtgcagtataccaattaggggaacattgatgactcgaaagacctagtctcatctctc 5706550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 12238245 - 12238423
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||| |||||||||||||||  |||||||||||||||| ||||| |||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  12238245 aagaatattagctcacctaaggaattagagactgtaatctgagaagagggttctaactcaagggattgattatgactatttt-gttaactatcgtggaac 12238343  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctc 190  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  | ||  | ||||||||| ||||||||||||||    
T  12238344 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacattgatgactcgaaagacctagtctcatctctc 12238423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 40616950 - 40616769
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  40616950 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 40616852  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||    
T  40616851 tagaaaagcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 40616769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 8874903 - 8874774
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||||||||||| |||||||||||||| || |||||||| ||||| ||||| |||||||||   |||||||| || |||||| ||||| |||| ||||||    
T  8874903 aagaatattagaccacctaaggaattaggggctgtaatcggagaagagggttctaagtcaatcgattgattatggctatttt-gttaaccatcttgaaac 8874805  T
Q  110 tagagaaatattcataggaagtaggtgcagt 140  Q
    |||||||  ||||||| ||| ||||||||||    
T  8874804 tagagaatcattcataagaaataggtgcagt 8874774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 19820707 - 19820899
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||||||||||||||| ||||||||||  |||||| |||||  |||||| |||    
T  19820707 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaagtcaagggattgattaggactatttt-gttaactatcgtggaac 19820805  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||   |||  ||||||||||| |  ||||||||||||  || ||||||||    
T  19820806 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacaaagatgattcgaaagacctgatctcatctctcttcatattttctaa 19820899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 37103361 - 37103181
Alignment:
Q  7 tcgaagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtga 106  Q
    ||||||| ||||||| |||| ||||||||| || ||||| | |||||| ||||| ||||||||| | ||||||||||  |||||| |||||  |||||||    
T  37103361 tcgaagattattagaccaccaaaggaattaggggctgtagtttgagaagagggttctaagtcaaaggattgattaggactatttt-gttaactatcgtga 37103263  T
Q  107 aactagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctct 189  Q
    ||||||| ||  ||||||| ||| |||||||||| ||| ||||| || ||  ||||  ||||||||||| |||||||||||||    
T  37103262 aactagaaaatcattcataagaa-taggtgcagtataccaattagggaaacatagatgattcgaaagacttagtctcatctct 37103181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 52006673 - 52006481
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||| |||||||||| |||||||| |  |||||| |||||  |||||| |||    
T  52006673 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcttaagtcaagggattgattatgactatttt-gttaactatcgtggaac 52006575  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| | |||||||||||||  || ||||||||    
T  52006574 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctggtctcatctctcttcatattttctaa 52006481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 33493837 - 33493729
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaa--tcatcgtgaa 107  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||| |||| ||| | ||||  ||||||||||||  | ||||| ||    
T  33493837 aagaatattagatcacctaaggaattagggactgtaatctgagaagatggtcctaagttaaggaattaaataggactattttagttaactttatcgtaaa 33493738  T
Q  108 actagagaa 116  Q
    |||||||||    
T  33493737 actagagaa 33493729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 10 - 317
Target Start/End: Complemental strand, 34017923 - 34017617
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||| |||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  34017923 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggttctaactcaagggattgattaagactatttt-gttaactatcgtggaac 34017825  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc-tatcttttctaaac-a 207  Q
     ||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||| |||  |||| |||| |    
T  34017824 cagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaaacta 34017726  T
Q  208 actttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattg 307  Q
     |||||| ||||| ||||||  ||||||||| | |||| |||| ||||| |||| ||||  |||||||||||||||  |  ||||  ||||| | |||||    
T  34017725 tctttatattctgttattta-attttatgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattg 34017627  T
Q  308 agattaacac 317  Q
    ||||||||||    
T  34017626 agattaacac 34017617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 3797950 - 3797761
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||| ||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  3797950 aagattattagaccacctaaggaattaggggttgtagtgtgagaagagggtcttaactcaagggattgattaggactatttt-gttaactatcgtggaac 3797852  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttc 201  Q
    ||| |||  ||| ||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||||||||||    
T  3797851 tagtgaatcattaataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctctatcttttc 3797761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 201
Target Start/End: Original strand, 5681407 - 5681596
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  5681407 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 5681505  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttc 201  Q
    |||| ||  ||||||| ||| ||| | |||| ||| ||||| |||||  | ||  ||||||||||| ||||||||||||||  |||||||||    
T  5681506 tagaaaatcattcataagaa-tagtttcagtataccaattaagggaacatcgatgattcgaaagacctagtctcatctctccttatcttttc 5681596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 40903225 - 40903033
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| || |||||||||||||| ||||||||||  |||||| |||||  |||||| |||    
T  40903225 aagattattagaccacctaaggaattaagggctgtagtttgagaagagagtcctaagtcaagggattgattaggactatttt-gttaactatcgtggaac 40903127  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  |||| |||||| |  ||||||||||||  || ||||||||    
T  40903126 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattctaaagacctgatctcatctctcttcatattttctaa 40903033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 377
Target Start/End: Original strand, 56198833 - 56199202
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||| | ||  |||| |  ||||| |||||||||| |||||| ||||||||||  |||||| |||||  ||| |  |||    
T  56198833 aagattattagaccacctaaggaatcaggggttgtagttagagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcttagaac 56198931  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatcttttctaaa-c 206  Q
    |||| ||  ||| |||  || |||||||||| ||| ||||| |||||  | ||  ||||||||||| |  | |||||||||||  | ||||||| ||| |    
T  56198932 tagaaaatgattaatacaaa-taggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatttcatctctctccttgtcttttccaaaac 56199030  T
Q  207 aactttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaat-aaatttacacatcctatttcataacactattgtttaat 305  Q
     |  |||||||||  ||||||||||||||||||| ||| ||||| | |||||||||||||  ||||||||||||||||  |  ||||  ||||| | |||    
T  56199031 tatcttattttctattatttactttttatgcacaccaa-cctactgtctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaat 56199129  T
Q  306 tgagattaacacggtccttgtggaaacaaactttattatattactttgat-agtttttaatacacttgctaaa 377  Q
    |||||||||||| ||||| ||||| || ||||| ||| |||||||| |||   |||||| |||||||||||||    
T  56199130 tgagattaacacagtcctcgtggatacgaacttaattttattacttcgatgcatttttagtacacttgctaaa 56199202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 328
Target Start/End: Original strand, 15432058 - 15432380
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| |||||||||   |||||| |||||  ||||||  ||    
T  15432058 aagattattagaccacctaaggaattaggggatgtagtttgagaagagggtcctaactcaagggattgattagaactatttt-gttaactatcgtggtac 15432156  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaa- 208  Q
    |||||||  ||||||| ||| |||||||||| ||| ||||| |||||  | ||  | ||||||||| |||||||||||||||   | ||||| ||||||     
T  15432157 tagagaatcattcataagaa-taggtgcagtataccaattaggggaacatcgatgactcgaaagacctagtctcatctctcttattattttccaaacaaa 15432255  T
Q  209 -ctttattttctg-atatttactttttatgca--caa--caaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgttt 302  Q
     ||||||||||||  ||||||  |||||||||  |||  |||| |||| ||||| |||| ||||  |||||||||||||||  |  ||||  ||||| |     
T  15432256 tctttattttctgtttattta-attttatgcaatcaaatcaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgcta 15432354  T
Q  303 aattgagattaacacggtccttgtgg 328  Q
    ||||||||||||||| ||||| ||||    
T  15432355 aattgagattaacacagtcctcgtgg 15432380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 377
Target Start/End: Original strand, 10386120 - 10386284
Alignment:
Q  210 tttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgag 309  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||| |  ||| |  ||||||||||||||||  |  ||||  ||||| | | |||||    
T  10386120 tttattttctgttatttactttttatgcac-acaaacctactgcctcagaaacttataaaatttacacatcctaaatattaactttattgctaagttgag 10386218  T
Q  310 attaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    |||||||| ||||| ||||| || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  10386219 attaacacagtcctcgtggatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 10386284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 222 - 377
Target Start/End: Original strand, 18859966 - 18860118
Alignment:
Q  222 tatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtc 321  Q
    ||||||||||||||||||| ||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| |||    
T  18859966 tatttactttttatgcaca-caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtc 18860064  T
Q  322 cttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    || ||||| || ||| ||||| |||||||| |||| |||||| |||||||||||||    
T  18860065 ctcgtggatacgaac-ttattttattacttcgata-tttttagtacacttgctaaa 18860118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 19859664 - 19859483
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| |||||||| |  ||||||| ||||| |||||| |||    
T  19859664 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaagactatttta-ttaattatcgtggaac 19859566  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| || ||||||| ||| ||||| ||||   ||||  ||||||||||| |  ||||||||||||||    
T  19859565 tagaaaataattcataagaa-tatgtgcagtataccaattaggggatcatagatgattcgaaagacctgatctcatctctctct 19859483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 24150652 - 24150833
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  24150652 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 24150750  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||   |||  ||||||||||| |  ||||||||||||||    
T  24150751 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacacagatgattcgaaagacctgatctcatctctctct 24150833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 39501628 - 39501809
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | ||| || |||||||||| |||| | ||||||||||  |||||| |||||  |||||| |||    
T  39501628 aagattattagaccacctaaggaattaggggctgtagtttgataagagggtcctaactcaaaggattgattaggactatttt-gttaactatcgtggaac 39501726  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||    
T  39501727 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 39501809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 52531077 - 52530896
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| ||     
T  52531077 aagattattagaccacctaaggaattaggggatgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaat 52530979  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||    
T  52530978 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 52530896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 59 - 193
Target Start/End: Complemental strand, 48014161 - 48014027
Alignment:
Q  59 gtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatt 158  Q
    |||||||||||| | ||| ||| ||| ||||||||||||   |||| |||||||||||||||||||| ||  ||| ||| | |||| ||||| ||||| |    
T  48014161 gtcctaagtcaaaggatttattggggctattttagttaacattcgtaaaactagagaaatattcataagacatagatgcggagtaccaattaggggaact 48014062  T
Q  159 tagagaattcgaaagacgtagtctcatctctctct 193  Q
     |||| |||||||||||  ||||||||||||||||    
T  48014061 cagaggattcgaaagaccaagtctcatctctctct 48014027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 191
Target Start/End: Original strand, 27014243 - 27014422
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||| | || ||||| | |||||| |||||| ||| |||| | ||||||||||  |||||| |||||  ||||||||||    
T  27014243 aagattattagaccacctaaggaatcaggggctgtagtttgagaagagggtcttaactcaaaggattgattaggactatttt-gttaactatcgtgaaac 27014341  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctct 191  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||    
T  27014342 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 27014422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 222 - 377
Target Start/End: Original strand, 17670500 - 17670652
Alignment:
Q  222 tatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtc 321  Q
    ||||||||||||||||||| ||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||  |||    
T  17670500 tatttactttttatgcaca-caaacctactgcctcaggcacttacaaaatttacacatcctagatattaactttattgctaagttgagattaacatagtc 17670598  T
Q  322 cttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    || ||||| || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  17670599 ctcgtggatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 17670652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 377
Target Start/End: Complemental strand, 15812279 - 15811909
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgatt-agggttattttagttaatcatcgtgaaa 108  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||  ||||||| |||  |||||| |||||  || ||  ||    
T  15812279 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagagattgatttaggactatttt-gttaactattgtagaa 15812181  T
Q  109 ctagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatcttttctaaa- 205  Q
    ||||| ||  ||| ||| ||| |||||||||| ||| ||||| |||||  | ||    ||||||||| |  |||||||||||||  | ||||||| |||     
T  15812180 ctagaaaatcattaatacgaa-taggtgcagtataccaattaggggaacatcgatgtatcgaaagacctgatctcatctctctccttgtcttttccaaaa 15812082  T
Q  206 caactttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaat-aaatttacacatcctatttcataacactattgtttaa 304  Q
    | |  ||||||| || |||| |||||||||||||| | ||||||| ||||| |||||||||  |||||||||| |||||  |  ||||  ||||| | ||    
T  15812081 ctatcttattttttgttattaactttttatgcaca-ctaacctactgcctcaggcactaaaacaaatttacacttcctagatattaacgttattgctaaa 15811983  T
Q  305 ttgagattaacacggtccttgtggaaacaaactttattatattactttgat-agtttttaatacacttgctaaa 377  Q
    ||||||||||||| ||||| ||||| || ||||| ||| |||||||| |||   |||||| |||||||||||||    
T  15811982 ttgagattaacacagtcctcgtggatacgaacttaattttattacttcgatgcatttttagtacacttgctaaa 15811909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 24044283 - 24044091
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||| ||||| || ||||| | |||||| || |||||||||||||| ||||||||||  |||||| |||||  |||||| |||    
T  24044283 aagattattagaccacctaagaaattaggggctgtagtttgagaagagtgtcctaagtcaagggattgattaggactatttt-gttaactatcgtggaac 24044185  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||| ||| ||| ||||| |||||  |||| ||||  |||||| |  ||||||||||||  || ||||||||    
T  24044184 tagaaaatcattcataagaa-taggtgtagtataccaattaggggaacatagataatttcaaagacctgatctcatctctcttcatattttctaa 24044091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 328
Target Start/End: Original strand, 29324810 - 29325122
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || ||||| | |||||||| |||| ||| |||||| ||||||||||| |||||| |||||  |||||| |||||||     
T  29324810 tattagaccacctaaggaattaggggctgtagtttgagaaaatggtcataactcaagggattgattagggctatttt-gttaactatcgtggaactagaa 29324908  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaacaactt 211  Q
    ||  ||| ||| ||| |||||||| | ||| ||||| |||||  | ||  ||||||||||| |  ||| |||||||||  | |||||| | |||| |  |    
T  29324909 aatcattaatatgaa-taggtgcaatataccaatta-gggaacatcgatgattcgaaagacctgatctgatctctctccttgtcttttccaaaactatct 29325006  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    ||||||||| ||||||   |||||||| | |||| |||| |||||||||||| ||| ||||||||||||||||  |  ||||  ||||| | ||||||||    
T  29325007 tattttctgttattta-aatttatgca-atcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgaga 29325104  T
Q  311 ttaacacggtccttgtgg 328  Q
    ||||||| ||||| ||||    
T  29325105 ttaacacagtcctcgtgg 29325122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 48637490 - 48637666
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| || ||||     
T  48637490 tattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaattagaa 48637588  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    ||  ||||||| | | |||||||||| ||| ||||| || ||  ||||  ||||||||||| |  ||||||||||||||    
T  48637589 aatcattcataagca-taggtgcagtataccaattagggaaacatagatgattcgaaagacctgatctcatctctctct 48637666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 12782884 - 12782957
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagg 83  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||||||||||||||||||||| ||||||||||    
T  12782884 aagattattagaccacctaaggaattaggggttgtagtttgagaaaagggtcctaagtcaagggattgattagg 12782957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 27677197 - 27677059
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||| ||||||||||| ||||||||||  |||||| |||||  || ||| |||    
T  27677197 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggttctaagtcaagggattgattaggactatttt-gttaactatggtggaac 27677099  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaatta 150  Q
    |||| ||  ||||||| ||| |||||||||| ||| |||||    
T  27677098 tagaaaatcattcataagaa-taggtgcagtataccaatta 27677059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 5670557 - 5670738
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  5670557 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattatgactatttt-gttaactatcgtggaac 5670655  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||| | ||| || ||||||| ||| ||||| |||||  ||||  ||||||||||| |  || |||||||||||    
T  5670656 tagaaaagcattcacaagaa-tatgtgcagtataccaattaggggaacatagatgattcgaaagacctgatcgcatctctctct 5670738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 5672875 - 5673056
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  5672875 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattatgactatttt-gttaactatcgtggaac 5672973  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||| | ||| || ||||||| ||| ||||| |||||  ||||  ||||||||||| |  || |||||||||||    
T  5672974 tagaaaagcattcacaagaa-tatgtgcagtataccaattaggggaacatagatgattcgaaagacctgatcgcatctctctct 5673056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 44164762 - 44164833
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgatta 81  Q
    |||| ||||||| |||||||||||||| ||| |||| | |||||| ||||||||||||||||| ||||||||    
T  44164762 aagattattagaccacctaaggaattagggattgtagtttgagaagagggtcctaagtcaagggattgatta 44164833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 282
Target Start/End: Original strand, 19929069 - 19929140
Alignment:
Q  210 tttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcct 282  Q
    ||||||||||| |||||| ||||||||||| |||||||||| ||||| |||||| |  |||||||||||||||    
T  19929069 tttattttctgttatttaatttttatgcac-acaaacctactgcctcaggcacttataaaatttacacatcct 19929140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 15446878 - 15446807
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgatta 81  Q
    |||| |||| || |||||||||||||| || ||||| | |||||| ||||||||||||||||| ||||||||    
T  15446878 aagattattggaccacctaaggaattaggggctgtagtttgagaagagggtcctaagtcaagggattgatta 15446807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 11195660 - 11195836
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||| ||||| || || ||| |  |||| |||||||||| |||||| ||||||||||  | |||| |||||  |||||| |||||| |    
T  11195660 tattagaccacctaagaaattaggggctttaaccctagaagagggtcctaactcaagggattgattaggactgtttt-gttaactatcgtggaactagtg 11195758  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    ||  ||||||| ||| || ||||||| ||| ||||| |||||  ||||  ||||||||||| ||  |||||||||||||    
T  11195759 aatcattcataagaa-tatgtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 11195836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 18673219 - 18673043
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || || ||| |  |||| |||||||||| |||||| ||||||||||  |||||| |||||  ||||| ||||||| |    
T  18673219 tattagaccacctaaggaattaggggctttaaccctagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtaaaactagtg 18673121  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |    |||| | ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| ||  |||||||||||||    
T  18673120 actctttcacaagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 18673043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 38283631 - 38283439
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| || ||||||| |||||| |||||||| |  |||||| ||| |  ||| || |||    
T  38283631 aagattattagaccacctaaggaattaggggctgtagtttgagaagagagtcctaactcaagggattgattatgactatttt-gtttactatcatggaac 38283533  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| ||| |||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  38283532 tagaaaatcattcataagaa-tagatgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 38283439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 193
Target Start/End: Original strand, 39498346 - 39498470
Alignment:
Q  67 tcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaat 166  Q
    |||||| ||||||||||  |||||| |||||  |||||| ||||||| ||  ||||||| ||| |||||||||| ||| ||||| ||||| |||||  ||    
T  39498346 tcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataagaa-taggtgcagtataccaattaggggaacttagatgat 39498443  T
Q  167 tcgaaagacgtagtctcatctctctct 193  Q
    ||||||||| |  ||||||||||||||    
T  39498444 tcgaaagacctgatctcatctctctct 39498470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 40794982 - 40795174
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||| |||||||||| |||||| |||  |||| | |||||  |||||| |||    
T  40794982 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcttaagtcaaggaattgatcaggactattct-gttaactatcgtgtaac 40795080  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||| ||| ||| ||||| || ||  ||||  ||||||||||| |  ||| ||||||||  || ||||||||    
T  40795081 tagaaaatcattcataagaa-taggtgtagtataccaattagggaaacatagatgattcgaaagacctgatcttatctctcttcatattttctaa 40795174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 3719103 - 3719176
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagg 83  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| ||||||||||| ||||| ||||||||||    
T  3719103 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcctaagccaagggattgattagg 3719176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 46955620 - 46955539
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttatttt 91  Q
    |||| ||||||  |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||| | ||||||    
T  46955620 aagattattagtccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagagctatttt 46955539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 48415671 - 48415475
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| |  ||||| | |||||| || ||||| | |||||| ||||||||||  |||||| |||||  ||| || |||    
T  48415671 aagattattagaccacctaaggaattaggagctgtagtttgagaagagagtcctgactcaagggattgattaggactatttt-gttaactatcatggaac 48415573  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatggga----atttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| ||||    || |||| |||||||||||| |  ||||||||||||  || ||||||||    
T  48415572 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatatatagataattcgaaagacctgatctcatctctcttcatattttctaa 48415475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 322
Target Start/End: Complemental strand, 19864317 - 19864225
Alignment:
Q  230 ttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtcc 322  Q
    ||||||||| | |||| |||| ||||| |||||||||  |||||||||||||||  |  ||||  ||||| | ||||||||||||||||||||    
T  19864317 ttttatgcaaaccaaaactactgcctctggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacggtcc 19864225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 25962045 - 25962111
Alignment:
Q  17 ttagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagg 83  Q
    ||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| ||||||||||    
T  25962045 ttagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgattagg 25962111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 35509949 - 35510015
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgatta 81  Q
    ||||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| ||||||||    
T  35509949 tattagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgatta 35510015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 53009695 - 53009519
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||| ||||| || |||||| |  |||| |||||||||| |||||  ||| ||||||  |||||| |||||  |||||| |||||| |    
T  53009695 tattagaccacctaagaaattaggggctgtaaccctagaagagggtcctaactcaagagattaattaggactatttt-gttaactatcgtggaactagtg 53009597  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    ||  ||||| | ||| |||||||||| ||| ||||| |||||  ||||  |||| |||||| ||  |||||||||||||    
T  53009596 aatcattcacaagaa-taggtgcagtatactaattaggggaacatagacgattcaaaagacctaaactcatctctctct 53009519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 377
Target Start/End: Original strand, 10248096 - 10248166
Alignment:
Q  305 ttgagattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||||||| ||||| ||||| || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  10248096 ttgagattaacacagtcctcgtggatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 10248166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 204
Target Start/End: Complemental strand, 15429992 - 15429806
Alignment:
Q  16 attagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagaga 115  Q
    |||||| |||||||||||||| || | ||| | ||||||  |||||| ||||||||| || ||||| |  |||||| |||||  |||||| ||||||| |    
T  15429992 attagaccacctaaggaattaggggcagtagtttgagaagtgggtcccaagtcaagggatggattaagactatttt-gttaactatcgtggaactagaaa 15429894  T
Q  116 aatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |  ||||||| ||| |||||| ||| ||| ||||| |||||  ||||  |||| |||||| |  ||||||||||||  || ||||||||    
T  15429893 atcattcataagaa-taggtgtagtataccaattaggggaacatagatgattcaaaagacctgatctcatctctcttcatattttctaa 15429806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 204
Target Start/End: Complemental strand, 15436606 - 15436420
Alignment:
Q  16 attagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagaga 115  Q
    |||||| |||||||||||||| || | ||| | ||||||  |||||| ||||||||| || ||||| |  |||||| |||||  |||||| ||||||| |    
T  15436606 attagaccacctaaggaattaggggcagtagtttgagaagtgggtcccaagtcaagggatggattaagactatttt-gttaactatcgtggaactagaaa 15436508  T
Q  116 aatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |  ||||||| ||| |||||| ||| ||| ||||| |||||  ||||  |||| |||||| |  ||||||||||||  || ||||||||    
T  15436507 atcattcataagaa-taggtgtagtataccaattaggggaacatagatgattcaaaagacctgatctcatctctcttcatattttctaa 15436420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 48013983 - 48013955
Alignment:
Q  185 tctctctctatcttttctaaacaacttta 213  Q
    |||||||||||||||||||||||||||||    
T  48013983 tctctctctatcttttctaaacaacttta 48013955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 10 - 338
Target Start/End: Original strand, 34682661 - 34682988
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||||||| ||||||||||| |||||| ||||| |||||||||||    
T  34682661 aagaatattagatcaccttaggaattagggactgtaatctgagaagagagtcctaagtcaagggattgattagggctattttggttaaccatcgtgaaac 34682760  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaac 209  Q
    |||||||||| ||||||||| || ||||||||||| ||||| || || | |||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  34682761 tagagaaatactcataggaaatacgtgcagtgtaccaattagggaaactcagaggattcgaaagacatagtctcatttctctctatcttttctaaacaac 34682860  T
Q  210 tttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgag 309  Q
    |||| ||| || ||||||| ||||||||||||||||||||| ||||| | |||||||  ||||||  |||||||  |  ||||||||||| | |||||||    
T  34682861 tttaatttatgttatttac-ttttatgcacaacaaacctactgcctcagacactaaaataatttattcatcctagatattaacactattgctaaattgag 34682959  T
Q  310 attaacacggtccttgtggaaacaaactt 338  Q
    |||| ||  ||||| ||||| || |||||    
T  34682960 attaccatagtcctcgtggatacgaactt 34682988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 351
Target Start/End: Original strand, 45457129 - 45457466
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || ||||| | |||||| |||||| ||| |||||| ||||||||||| |||||| |||||  |||||| |||||||     
T  45457129 tattagaccacctaaggaattaggggctgtagtttgagaagagggtcttaactcaagggattgattagggctatttt-gttaactatcgtggaactagaa 45457227  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaacaactt 211  Q
    ||  ||| ||| ||| |||||||||| ||  ||||| ||||| |||||  ||||||||||| |  |||||||||||||  | |||||| | |||| |  |    
T  45457228 aatcattaatacgaa-taggtgcagtataacaattaggggaacttagatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatct 45457326  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    ||||||||| |||||||||||||||||| || ||||||| | ||| |||||| ||| ||||||||||||||||  |  ||||  ||||| | ||||||||    
T  45457327 tattttctgttatttactttttatgcac-accaacctactgtctcaggcactaaaacaaatttacacatcctagatattaacgttattgctaaattgaga 45457425  T
Q  311 ttaacacggtccttgtggaaacaaactttattatattactt 351  Q
    ||||||| ||||| ||||| || ||||| ||| ||||||||    
T  45457426 ttaacacagtcctcgtggatacgaacttaattttattactt 45457466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 377
Target Start/End: Complemental strand, 31427684 - 31427315
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| ||| |||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||| |||||| |||||  |||||| ||     
T  31427684 aagattattagaccacttaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaat 31427586  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatcttttctaaa-c 206  Q
    |||| ||  ||| ||| ||| |||||||||| ||| ||||| |||||  | ||  ||||||||||| |  |||||||||||||  | ||||||| ||| |    
T  31427585 tagaaaatcattaatacgaa-taggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaac 31427487  T
Q  207 aactttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaat 305  Q
     |  |||||||||| ||||||||||||||||| | |||| | || |||||||||||| ||| ||||||||||||||||  |  ||||  ||||| | |||    
T  31427486 tatcttattttctgttatttactttttatgca-atcaaaaccactgcctcgggcactaaaagaaatttacacatcctaaatattaaccttattgctaaat 31427388  T
Q  306 tgagattaacacggtccttgtggaaacaaactttattatattactttgat-agtttttaatacacttgctaaa 377  Q
    |||||||||||| ||| | ||||| || ||||| ||| |||||||| |||   |||||| |||||||||||||    
T  31427387 tgagattaacacagtcttcgtggatacgaacttaattttattacttcgatgcatttttagtacacttgctaaa 31427315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 10 - 328
Target Start/End: Original strand, 24235058 - 24235381
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  24235058 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 24235156  T
Q  110 tagagaaat-attcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct--atcttttctaaac 206  Q
    ||| ||||| ||||||| ||| |||||||||| ||| ||||| |||||  |||| |||||||||||| |  |||||||| |||||   ||||||| |  |    
T  24235157 tag-gaaatcattcataagaa-taggtgcagtataccaattaggggaacatagataattcgaaagacctgatctcatctttctcttattcttttcaattc 24235254  T
Q  207 -aactttattttctgatatttactttttatgca--caa--caaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtt 301  Q
     | |||||||||||| |||||||||||  ||||  |||  |||| |||| |||||||||||||||  |||||||||||||||  |  ||||  ||||| |    
T  24235255 gatctttattttctgttatttacttttattgcaatcaaaccaaaactactgcctcgggcactaaaataatttacacatcctaagtattaaccttattgct 24235354  T
Q  302 taattgagattaacacggtccttgtgg 328  Q
     ||||||||||||||| ||||| ||||    
T  24235355 aaattgagattaacacagtcctcgtgg 24235381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 351
Target Start/End: Original strand, 45453841 - 45454178
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| ||||||||| | |||||| |||||  ||| || |||||||     
T  45453841 tattagaccacctaaggaattaggggttgtagtttgagaagagggtcctaactcaagggattgattagtgctatttt-gttaactatcatggaactagaa 45453939  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaacaactt 211  Q
    ||  ||| ||| ||| |||||||| | ||| |||||  | || ||| |  ||||||||||| |  |||||||||||||  | |||||| | |||| |  |    
T  45453940 aatcattaatacgaa-taggtgcattataccaattagagaaacttatatgattcgaaagacctgatctcatctctctccttgtctttttcaaaactatct 45454038  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaat-aaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    ||||||||| ||||||||||||||||||| ||| ||||| ||||| |||||||||  ||||||||||||||||  |  ||||  ||||| | ||||||||    
T  45454039 tattttctgttatttactttttatgcacaccaa-cctactgcctcaggcactaaaacaaatttacacatcctagatattaacgttattgctaaattgaga 45454137  T
Q  311 ttaacacggtccttgtggaaacaaactttattatattactt 351  Q
    ||||||| ||||| ||||| |||||||| ||| ||||||||    
T  45454138 ttaacacagtcctcgtggatacaaacttaattttattactt 45454178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 35521504 - 35521378
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||| |  ||||||||   |||||||||||| |||||  ||||    
T  35521504 aagaatattagatcacctaagaaattagggattgtaatctgagaagagggtcctaagtcaatgagttgattagaactattttagttaaccatcgaaaaac 35521405  T
Q  110 tagagaaatattcataggaagtaggtg 136  Q
    |||||||||||| | ||||| ||||||    
T  35521404 tagagaaatatttacaggaaataggtg 35521378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 334
Target Start/End: Complemental strand, 9185567 - 9185242
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| ||||||||||||||  ||||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  9185567 aagattattagaccacctaaggaattagagactgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 9185469  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct--atcttttctaaac- 206  Q
    |||| ||  ||||||| ||| || ||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||   ||||| | ||||     
T  9185468 tagaaaatcattcataagaa-tatgtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaaaact 9185370  T
Q  207 aactttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaat 305  Q
    | |||||| |||||  ||||||  ||||||||| | |||| |||| ||||| |||||||||  |||||||||||||||  |  ||||  ||||| | |||    
T  9185369 atctttatattctgtttattta-attttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaactttattgctgaat 9185271  T
Q  306 tgagattaacacggtccttgtggaaacaa 334  Q
    |||||||||||| ||||| |||| |||||    
T  9185270 tgagattaacacagtcctcgtgggaacaa 9185242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 10 - 232
Target Start/End: Original strand, 26365896 - 26366119
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  26365896 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 26365994  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctc-tctatcttttctaaa--c 206  Q
    |||||||  ||||||| ||| ||||| || | ||| ||||| |||||  |||| ||||| |||||| |||||||||||||| | ||| ||||| |||       
T  26365995 tagagaatcattcataagaa-taggtacactataccaattaggggaacatagataattcaaaagacctagtctcatctctcatatatattttccaaaact 26366093  T
Q  207 aactttattttctgatatttactttt 232  Q
    | |||||||||||| |||||||||||    
T  26366094 atctttattttctgttatttactttt 26366119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 232
Target Start/End: Original strand, 5105689 - 5105911
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  5105689 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 5105787  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaa- 208  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  |||| |||| ||||||| |  ||||||||||||  || |||||||| |||     
T  5105788 tagaaaatcattcatatgaa-taggtgcagtataccaattaggggaacatagataatttgaaagacctgatctcatctctcttcatattttctaaccaaa 5105886  T
Q  209 -ctttattttctgatatttactttt 232  Q
     ||||||||| || |||||| ||||    
T  5105887 tctttattttatgttatttaatttt 5105911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 328
Target Start/End: Original strand, 24238330 - 24238653
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  24238330 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggtatatttt-gttaactatcgtggaac 24238428  T
Q  110 tagagaaat-attcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc-tatcttttctaa--a 205  Q
    ||| ||||| ||||||| ||| |||||||||| ||| ||||| |||||  |||| |||||||||||| |  |||||||| |||| |||  |||| ||       
T  24238429 tag-gaaatcattcataagaa-taggtgcagtataccaattaggggaacatagataattcgaaagacctgatctcatctttctcttattctttccaattc 24238526  T
Q  206 caactttattttctgatatttactttttatgca--caa--caaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtt 301  Q
     | |||||||||||| |||||||||||  ||||  |||  |||| |||| | |||||||||||||  |||||||||||||||  |  ||||  ||||| |    
T  24238527 gatctttattttctgttatttacttttattgcaatcaaaccaaaactactgtctcgggcactaaaataatttacacatcctaagtattaaccttattgct 24238626  T
Q  302 taattgagattaacacggtccttgtgg 328  Q
     ||||||||||||||| ||||| ||||    
T  24238627 aaattgagattaacacagtcctcgtgg 24238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 232
Target Start/End: Complemental strand, 25820989 - 25820767
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  25820989 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 25820891  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaac--a 207  Q
    |||| ||  ||||||| ||| |||||||||| ||  ||||| |||||  | ||  ||||||||||| ||||||||||||||  ||| ||||| ||||  |    
T  25820890 tagaaaatcattcataagaa-taggtgcagtatatcaattaggggaacatcgatgattcgaaagacctagtctcatctctccatatattttccaaacata 25820792  T
Q  208 actttattttctgatatttactttt 232  Q
     |||||||||||| |||||||||||    
T  25820791 tctttattttctgttatttactttt 25820767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 317
Target Start/End: Complemental strand, 25959831 - 25959524
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| |||||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  25959831 aagattattagaccacctaaggaattaggggttgtagtctgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 25959733  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaa--ca 207  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||   ||||||| |||   |    
T  25959732 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttattcttttccaaaacta 25959634  T
Q  208 actttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaatt 306  Q
     |||||| |||||  ||||||  ||||||||| | |||| |||| |||||  ||||||||  |||||||||||||||  |  ||||  ||||| | ||||    
T  25959633 tctttatattctgtttattta-attttatgcaaaccaaaactactgcctcaagcactaaaataatttacacatcctaaatgttaaccttattgctaaatt 25959535  T
Q  307 gagattaacac 317  Q
    |||||||||||    
T  25959534 gagattaacac 25959524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 328
Target Start/End: Original strand, 33310634 - 33310947
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||| |||||| |||||  | |||| |||||||     
T  33310634 tattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagggctatttt-gttaactaccgtggaactagaa 33310732  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaacaactt 211  Q
    || |||| ||| ||| ||| |||||| ||| ||||| |||||  | ||  ||||||||||| |  |||||||||||||  | |||||| | |||| |  |    
T  33310733 aattattaatatgaa-tagttgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatct 33310831  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    ||||||||| ||||||   |||||||| | |||| |||| |||||||||||| ||| ||||||||||||||||  |  ||||  ||||| | ||||||||    
T  33310832 tattttctgttattta-aatttatgca-atcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgaga 33310929  T
Q  311 ttaacacggtccttgtgg 328  Q
    ||||||| ||||| ||||    
T  33310930 ttaacacagtcctcgtgg 33310947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 10 - 377
Target Start/End: Complemental strand, 36808585 - 36808217
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| ||||||| |||||| || ||||| | | |||| |||||| ||| |||||| |||||||||   |||||| |||||  || ||| |||    
T  36808585 aagattattagaccacctaaagaattagggtctgtagtttaagaagagggtcttaactcaagggattgattagaactatttt-gttaactattgtggaac 36808487  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaac 206  Q
    |||| ||  ||||||| ||| |||||||||||||| ||||| ||||| ||| || ||| ||||||| |  |||||||||||||  |||||||| | ||||    
T  36808486 tagaaaatcattcataagaa-taggtgcagtgtaccaattaggggaacttaaaggatttgaaagacctgatctcatctctctccttatcttttccaaaac 36808388  T
Q  207 aactttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaat 305  Q
     | |||||||||||  ||||||  |||||||||| |||||||||| |||||   |||| |  ||||||||||||||||  |  ||||  ||||| | |||    
T  36808387 tattttattttctgtttattta-attttatgcac-acaaacctactgcctcaatcacttataaaatttacacatcctagatattaaccttattgctaaat 36808290  T
Q  306 tgagattaacacggtccttgtggaaacaaactttattatattactttgata-gtttttaatacacttgctaaa 377  Q
    ||||||||| || ||||| ||||| || ||||| ||| |||||||| ||||   ||| |||||||||||||||    
T  36808289 tgagattaatacagtcctcgtggatacgaacttaattttattacttcgatatagtttaaatacacttgctaaa 36808217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 8888598 - 8888779
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| |||||||||   |||||| |||||  |||||| |||    
T  8888598 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagaactatttt-gttaactatcgtggaac 8888696  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||| ||||||| || ||||||||||||||    
T  8888697 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgatttgaaagacctaatctcatctctctct 8888779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 332
Target Start/End: Original strand, 29440457 - 29440780
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||| |||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  29440457 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggttctaactcaagggattgattatgactatttt-gttaactatcgtggaac 29440555  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatcttttctaaac- 206  Q
    |||||||  ||||||| ||| |||||||||| ||| ||||| || ||  ||||  | ||||||||| |  |||||||||||||  | ||||| | ||||     
T  29440556 tagagaatcattcataagaa-taggtgcagtataccaattagggaaacatagatgactcgaaagacctgatctcatctctctctttttctttccaaaact 29440654  T
Q  207 aactttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaat 305  Q
    | |||||| |||||  ||||||  ||||||||| | |||| |||| ||||| |||| ||||  |||||||||||||||  |  ||||  ||||| | |||    
T  29440655 atctttatattctgtttattta-attttatgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaat 29440753  T
Q  306 tgagattaacacggtccttgtggaaac 332  Q
    |||||||||||| ||||| ||||||||    
T  29440754 tgagattaacacagtcctcgtggaaac 29440780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 31586083 - 31585891
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  31586083 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 31585985  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| ||| |||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  31585984 tagaaaatcattcataagaa-tagatgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 31585891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 40781434 - 40781626
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||| ||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  40781434 aagattattagaccacctaagaaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 40781532  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  40781533 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 40781626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 334
Target Start/End: Original strand, 38015486 - 38015805
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||| |||||| |||||  |||||| |||||||     
T  38015486 tattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactagaa 38015584  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaacaactt 211  Q
    ||  ||| ||| ||| ||||| |||| ||  ||||| |||||  | ||  ||||||||||| |  |||||||||||||  | |||||| | |||| |  |    
T  38015585 aatcattaatacgaa-taggttcagtatatcaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatct 38015683  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
     |||||||| ||||||   |||||||| | |||| |||| |||||||||||| ||| ||||||||||||||||  |  ||||  ||||| | ||||||||    
T  38015684 cattttctgttattta-aatttatgca-atcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgaga 38015781  T
Q  311 ttaacacggtccttgtggaaacaa 334  Q
    ||||||| ||||| |||| |||||    
T  38015782 ttaacacagtcctcgtgggaacaa 38015805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 22021030 - 22021211
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| ||||| |||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  22021030 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggttctaactcaagggattgattaggactatttt-gttaactatcgtggaac 22021128  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||||||  ||||||| ||| |||||||||| ||| ||||| || ||  ||||  ||||||||||| |  ||||||||||||||    
T  22021129 tagagaatcattcataagaa-taggtgcagtataccaattagggtaacatagatgattcgaaagaccttatctcatctctctct 22021211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 328
Target Start/End: Complemental strand, 37279819 - 37279500
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| ||| |||||||||| || ||||| | |||||| ||| |||||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  37279819 aagattattagaccacgtaaggaattaggggctgtagtttgagaagaggatcctaactcaagggattgattatgactatttt-gttaactatcgtggaac 37279721  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct--atcttttctaaac- 206  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||   ||||| | ||||     
T  37279720 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaaaact 37279622  T
Q  207 aactttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaat 305  Q
    | |||||| |||||  ||||||  ||||||||| | ||||  ||| ||||| |||||||||  |||||||||||||||  |  ||||  ||||| | |||    
T  37279621 atctttatattctgtttattta-attttatgcaaaccaaaaatactgcctcaggcactaaaataatttacacatcctaaatattaactttattgctgaat 37279523  T
Q  306 tgagattaacacggtccttgtgg 328  Q
    |||||||||||| ||||| ||||    
T  37279522 tgagattaacacagtcctcgtgg 37279500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 191
Target Start/End: Complemental strand, 30274911 - 30274732
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||| ||| |||||| |||||||| |  |||||| |||||  ||||||||||    
T  30274911 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcttaactcaagggattgattatgactatttt-gttaactatcgtgaaac 30274813  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctct 191  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| | |||  ||||  ||||||||||| |  ||||||||||||    
T  30274812 tagaaaatcattcataagaa-taggtgcagtataccaattaggagaacatagatgattcgaaagacatgctctcatctctct 30274732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 204
Target Start/End: Original strand, 30926520 - 30926695
Alignment:
Q  27 taaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattcatag 126  Q
    |||||||||| ||  ||| ||||||||| ||||||||||||||| | ||||||||||  |||||| | ||| ||||||||||||||| ||  |||| |||    
T  30926520 taaggaattaggggttgtcatctgagaagagggtcctaagtcaatggattgattaggactatttt-gctaaccatcgtgaaactagaaaatcattcgtag 30926618  T
Q  127 gaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
     || |||||||||| ||  ||||| |||||   |||| ||||||||||| |  | |||||||||||||| ||||||||    
T  30926619 aaaataggtgcagtatatcaatta-gggaaaccagaggattcgaaagacctgatttcatctctctctatattttctaa 30926695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 317
Target Start/End: Complemental strand, 9188795 - 9188487
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||| ||||| ||  |||| | |||||| |||||||||| |||||| ||||||||||  |||||| ||| |  |||||| |||    
T  9188795 aagattattagaccacctaagtaattaggggttgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttgactatcgtggaac 9188697  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct--atcttttctaaac- 206  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||   ||||| | ||||     
T  9188696 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaaaact 9188598  T
Q  207 aactttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaat 305  Q
    | |||||  |||||  ||||||  ||||||||| | |||| |||| ||||| |||||||||  |||||||||||||||  |  ||||  ||||| | |||    
T  9188597 atctttacattctgtttattta-attttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaaccttattgctgaat 9188499  T
Q  306 tgagattaacac 317  Q
    ||||||||||||    
T  9188498 tgagattaacac 9188487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 9966512 - 9966331
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| ||||||  ||||||| |  |||||| |||||  ||||||||||    
T  9966512 aagattattagaccacctaaggaattaagggctgtagtttgagaagagggtcctaactcaagggtttgattatgactatttt-gttaactatcgtgaaac 9966414  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||| | ||| ||||| |||||  ||||  |||| |||||| |  ||||||||||||||    
T  9966413 tagaaaataattcataagaa-taggtgcaatataccaattaggggaacatagatgattcaaaagacttgatctcatctctctct 9966331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 22630808 - 22630984
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || |||||| |  |||||| |||||||| |||||| |||||||| |  |||||| |||||  |||||| |||||| |    
T  22630808 tattagaccacctaaggaattaggggctgtaaccctagaaaatggtcctaactcaagggattgattatgactatttt-gttaactatcgtggaactaggg 22630906  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    ||  ||||||| ||| |||||||||| ||| ||||| |||||  || |  ||||||||||| ||  |||||||||||||    
T  22630907 aatcattcataagaa-taggtgcagtataccaattaagggaacataaatgattcgaaagacctaaactcatctctctct 22630984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 232
Target Start/End: Complemental strand, 25139074 - 25138851
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  25139074 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcctaactcaagggattgattatgactatttt-gttaactatcgtggaac 25138976  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc-tatcttttctaaacaa 208  Q
    | || ||   |||||| ||| |||||||||| ||| ||||| || ||| | || |||||||||||| |  ||||||||||||| ||| ||||| ||||||    
T  25138975 ttgaaaatcgttcataagaa-taggtgcagtataccaattagggaaatatcgataattcgaaagacctgatctcatctctctcttatattttccaaacaa 25138877  T
Q  209 --ctttattttctgatatttactttt 232  Q
      ||||||||| || |||||| ||||    
T  25138876 atctttattttatgttatttaatttt 25138851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 156
Target Start/End: Complemental strand, 42368854 - 42368710
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  42368854 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 42368756  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaa 156  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||    
T  42368755 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaa 42368710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 191
Target Start/End: Complemental strand, 43208032 - 43207854
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||| | |||||| ||||||||||  |||||| |||||  |||||| |||    
T  43208032 aagactattagaccacctaaggaattaggggctgtagtttgagaagagggtcct-actcaagggattgattaggactatttt-gttaactatcgtggaac 43207935  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctct 191  Q
    |||| ||  ||||||| ||| ||| |||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||    
T  43207934 tagaaaatcattcataagaa-tagatgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 43207854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 45493299 - 45493161
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||| |||| |||||| ||||||||||  |||||| |||||  |||||  |||    
T  45493299 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggttctaactcaagggattgattaggactatttt-gttaactatcgtagaac 45493201  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaatta 150  Q
    |||||||  ||||||| ||| |||||||||| ||| |||||    
T  45493200 tagagaatcattcataagaa-taggtgcagtataccaatta 45493161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 45501041 - 45500903
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||| |||| |||||| ||||||||||  |||||| |||||  |||||  |||    
T  45501041 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggttctaactcaagggattgattaggactatttt-gttaactatcgtagaac 45500943  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaatta 150  Q
    |||||||  ||||||| ||| |||||||||| ||| |||||    
T  45500942 tagagaatcattcataagaa-taggtgcagtataccaatta 45500903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 10600885 - 10600991
Alignment:
Q  18 tagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaa 117  Q
    |||| |||||||||||||| || ||||| | |||||| ||||| |||| |||||| |||||||||| ||||||| |||||  |||||| ||||||||||     
T  10600885 tagaccacctaaggaattaagggctgtagtttgagaagagggttctaactcaagggattgattaggattatttt-gttaactatcgtggaactagagaat 10600983  T
Q  118 tattcata 125  Q
     |||||||    
T  10600984 cattcata 10600991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 16179089 - 16179203
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||||||  |||| |||||||||| |||||| ||||||||| | |||||| |||||  |||||| |||    
T  16179089 aagattattagaccacctaaggaattaggggatgtaatcctagaagagggtcctaactcaagggattgattagagctatttt-gttaactatcgtggaac 16179187  T
Q  110 tagagaaatattcata 125  Q
    |||||||  |||||||    
T  16179188 tagagaatcattcata 16179203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 4578016 - 4578089
Alignment:
Q  210 tttattttctgatatttactttttat-gcacaacaaacctaccgcctcgggcactaaataaatttacacatccta 283  Q
    ||||||||||| |||||||||||||| ||||| ||||||||| ||||| |||||| | |||||||||||||||||    
T  4578016 tttattttctgttatttactttttattgcaca-caaacctactgcctcaggcacttattaaatttacacatccta 4578089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 43723662 - 43723854
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||||| || | |||||  |||||||||||| || | |||||||| |  |||||| |||||  |||||| |||    
T  43723662 aagattattagaccacctaaggaattagggactatagtttgagacgagggtcctaagttaaaggattgattatgactatttt-gttaactatcgtggaac 43723760  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||| | ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  43723761 tagaaaatcattcataagaa-taggtgcaatataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 43723854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 377
Target Start/End: Original strand, 13518493 - 13518642
Alignment:
Q  225 ttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtcctt 324  Q
    |||||||||||||||| ||||||||| |||||   |||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| |||||     
T  13518493 ttactttttatgcaca-caaacctactgcctcaaacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctc 13518591  T
Q  325 gtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||| || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  13518592 gtggatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 13518642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 382
Target Start/End: Original strand, 3252508 - 3252663
Alignment:
Q  222 tatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtc 321  Q
    ||||||||||||||||| | |||||| || ||||| | |||| |  ||||||||||||||||  |  ||||  ||||| |   ||||||||||||| ||     
T  3252508 tatttactttttatgca-atcaaaccaactgcctcagacacttataaaatttacacatcctagatattaactttattgctatgttgagattaacacagtt 3252606  T
Q  322 cttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaatttct 382  Q
    || ||||||||||| |||    |||||||| ||||||||||| ||||||||||||| ||||    
T  3252607 ctcgtggaaacaaatttt----tattacttcgatagtttttagtacacttgctaaacttct 3252663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 1386560 - 1386384
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| |||||||| |  |||||| |||||  ||||| ||||||| |    
T  1386560 tattagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgattaagactatttt-gttaactatcgtaaaactaggg 1386462  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |   ||||| | ||| || ||||||| ||| ||||| |||||  ||||  ||||||||||| ||  |||||||||||||    
T  1386461 actcattcacaagaa-taagtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 1386384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 5666480 - 5666671
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| |||||||| |  |||||| |||||  ||| || |||    
T  5666480 aagattattagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgattatgactatttt-gttaactatcttggaac 5666578  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| || ||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  5666579 tagaaaatcattcataagaa-tatgtgcagtataccaattaggggaacataga-tattcgaaagacctgatctcatctctcttcatattttctaa 5666671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 13972037 - 13971845
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  | || | |||||| || ||||||||| |||| |||||||| |  |||||| |||||  |||||| |||    
T  13972037 aagattattagaccacctaaggaattaggggttttattttgagaagagtgtcctaagttaagggattgattatgactatttt-gttaactatcgtggaac 13971939  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  | ||||||||||  || ||||||||    
T  13971938 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatatcatctctcttcatattttctaa 13971845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 204
Target Start/End: Original strand, 6826739 - 6826925
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || ||||| | |||||| ||  |||||||||||||  |||||||||  |||||| ||||| ||||||| |||||||     
T  6826739 tattagaccacctaaggaattaggggctgtagtttgagaagagaatcctaagtcaagggtttgattaggactatttt-gttaa-catcgtggaactagaa 6826836  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    ||  |||||||  || |||||||||| ||| ||||| ||||   ||||  ||||||||||| |  |||||||| |||  || ||||||||    
T  6826837 aatcattcata-aaaataggtgcagtataccaattaggggagcatagatgattcgaaagacctgatctcatctatcttcatattttctaa 6826925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 27266751 - 27266853
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| ||| ||||||  |||||| |||||  |||||| |||    
T  27266751 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcctaactcaaggaatttattaggactatttt-gttaactatcgtggaac 27266849  T
Q  110 taga 113  Q
    ||||    
T  27266850 taga 27266853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 3875253 - 3875358
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || |||||| |  |||| || ||||||| |||||| ||||||||||  |||||| |||||  |||||| |||||| |    
T  3875253 tattagaccacctaaggaattaggggctgtaaccctagaagagtgtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagtg 3875351  T
Q  115 aaatatt 121  Q
    || ||||    
T  3875352 aattatt 3875358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 11056531 - 11056588
Alignment:
Q  225 ttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatccta 283  Q
    |||||||||||||||| ||||||||| ||||| |||||| |  ||||||||||||||||    
T  11056531 ttactttttatgcaca-caaacctactgcctcaggcacttataaaatttacacatccta 11056588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 12219799 - 12219939
Alignment:
Q  51 agaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattcataggaagtaggtgcagtgtacaaatta 150  Q
    |||| |||||||||| |||||| |||||||| |  |||||| | |||  |||||| ||||||| ||| ||||| | ||| |||||||||| ||| |||||    
T  12219799 agaagagggtcctaactcaagggattgattatgactatttt-gctaactatcgtggaactagaaaaacattcacaagaa-taggtgcagtataccaatta 12219896  T
Q  151 tgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
     |||||  ||||  ||||||||||| ||  |||||||||||||    
T  12219897 ggggaacatagatgattcgaaagacctaaactcatctctctct 12219939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 17874726 - 17874586
Alignment:
Q  14 atattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactaga 113  Q
    |||||||| |||||||||||||| ||  ||||| |  |||| |||||||||| | |||| ||||| || |  |||||| ||||||||||||  ||||||     
T  17874726 atattagaccacctaaggaattaggggttgtaaccctagaagagggtcctaacttaagggattgactaagactatttt-gttaatcatcgtagaactagt 17874628  T
Q  114 gaaatattcataggaagtaggtgcagtgtacaaattatgggaa 156  Q
    |||  ||||| | ||| |||||||||||||| ||||| |||||    
T  17874627 gaatcattcacaagaa-taggtgcagtgtaccaattaggggaa 17874586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 377
Target Start/End: Complemental strand, 1503307 - 1503200
Alignment:
Q  268 aaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatac 367  Q
    ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| ||||| ||||| || || |||||| |||||||| ||||| ||||| |||    
T  1503307 aaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaa-tttattttattacttcgatag-ttttagtac 1503210  T
Q  368 acttgctaaa 377  Q
    ||||||||||    
T  1503209 acttgctaaa 1503200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 377
Target Start/End: Complemental strand, 1506511 - 1506404
Alignment:
Q  268 aaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatac 367  Q
    ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| ||||| ||||| || || |||||| |||||||| ||||| ||||| |||    
T  1506511 aaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaa-tttattttattacttcgatag-ttttagtac 1506414  T
Q  368 acttgctaaa 377  Q
    ||||||||||    
T  1506413 acttgctaaa 1506404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 361
Target Start/End: Original strand, 11059992 - 11060123
Alignment:
Q  228 ctttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtg 327  Q
    ||||||||||||| ||||||||| ||||| | |||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| || || |||    
T  11059992 ctttttatgcaca-caaacctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagttctcgtg 11060090  T
Q  328 gaaacaaactttattatattactttgatagtttt 361  Q
    || || ||| ||||| |||||||| |||||||||    
T  11060091 gatacgaac-ttattttattacttcgatagtttt 11060123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 16790895 - 16790827
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagg 83  Q
    ||||||| |||||||||||||| || |||||  |  |||| |||||||||| |||||| ||||||||||    
T  16790895 tattagaccacctaaggaattaggggctgtagccctagaagagggtcctaactcaagggattgattagg 16790827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 382
Target Start/End: Original strand, 43723966 - 43724045
Alignment:
Q  303 aattgagattaacacggtccttgtggaaacaaactttattatattactttgata-gtttttaatacacttgctaaatttct 382  Q
    ||||||||||||||| ||||| ||||| || ||| ||||| |||||||| ||||  |||||| ||||||||||||| ||||    
T  43723966 aattgagattaacacagtcctcgtggatacgaac-ttattttattacttcgatatatttttagtacacttgctaaaattct 43724045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 153; Significance: 6e-81; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 13 - 378
Target Start/End: Original strand, 9922 - 10288
Alignment:
Q  13 aatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactag 112  Q
    ||||||| | ||| |||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||| ||||| |||||||||| |||    
T  9922 aatattataacacataaggaattagggactctaatctgagaagagggtcctaagtcaagggattgattagggctattttggttaaccatcgtgaaattag 10021  T
Q  113 agaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaa-ctt 211  Q
    ||||||||||  ||||| |||||||||||||| ||||| ||||| | |||| |||| |||||| ||||||||||||||  ||||||||| ||||||  ||    
T  10022 agaaatattcgaaggaaataggtgcagtgtaccaattaggggaactcagaggattcaaaagacatagtctcatctctccttatcttttccaaacaatatt 10121  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaa-tttacacatcctatttcataacactattgtttaattgag 309  Q
    || ||| || ||||||||||||||||| ||||||||||| |||||| ||||| ||||||| |||||||||||||| | |||||  ||||| | |||||||    
T  10122 taatttatgttatttactttttatgca-aacaaacctactgcctcgagcactaaaataaactttacacatcctatataataaccatattgctaaattgag 10220  T
Q  310 attaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaat 378  Q
    ||||| |  ||||| ||||||||||||||  || |||||||||||||| ||||| ||||||||||||||    
T  10221 attaatagagtcctcgtggaaacaaacttatttttattactttgatag-ttttagtacacttgctaaat 10288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 2e-62; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 10 - 382
Target Start/End: Original strand, 5796519 - 5796890
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||||||||||||||||||||||||||  || |||||| ||| || ||||||||||||||||| ||||||||| | ||||||||||| ||||| ||||||    
T  5796519 aagaatattagatcacctaaggaattagagattgtaatatgataagagggtcctaagtcaagggattgattagagctattttagttagtcatcatgaaac 5796618  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaac-aa 208  Q
    ||||||| ||||| || ||| ||||||  |||||| ||||| |||||   | || | ||||||||| ||||||||||||||  |||||||||||||| ||    
T  5796619 tagagaattattcttaagaaataggtgttgtgtaccaattaggggaacccaaaggactcgaaagacttagtctcatctctccatatcttttctaaacaaa 5796718  T
Q  209 ctttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    |||||||||||| |||||||||||||||||| |||||| ||  ||||  | |||| |  ||||||||||||||||  |  ||||  ||||| | | ||||    
T  5796719 ctttattttctgttatttactttttatgcac-acaaacatattgccttagacacttataaaatttacacatcctagatattaactttattgctaagttga 5796817  T
Q  309 gattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaatttct 382  Q
    ||||||||| ||| | ||||| || |||||  || |||||||| ||||| ||||| ||||||||||||||||||    
T  5796818 gattaacacagtcttcgtggatacgaacttatttttattacttcgatag-ttttagtacacttgctaaatttct 5796890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 220
Target Start/End: Complemental strand, 18562683 - 18562468
Alignment:
Q  7 tcgaagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtga 106  Q
    ||||| |||||||| ||||||||||||||| |||||||||| |||||| || |||||||||||| | ||| || |||| ||||||||||||  ||||| |    
T  18562683 tcgaataatattagctcacctaaggaattagggactgtaatatgagaagagagtcctaagtcaaaggattaatcagggctattttagttaactatcgtaa 18562584  T
Q  107 aactagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaac 206  Q
    |||||||||| |||||||| |||||||||||| ||||  ||||| || || | |||| |||  |||||| | ||||||||||||||||| |||||||| |    
T  18562583 aactagagaagtattcataagaagtaggtgcaatgtatcaattagggaaactcagaggattttaaagacatggtctcatctctctctatattttctaatc 18562484  T
Q  207 aa--ctttattttctg 220  Q
    ||  ||||||||||||    
T  18562483 aaatctttattttctg 18562468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 10 - 328
Target Start/End: Original strand, 16165716 - 16166035
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || |||||||||||||| |||||||||| |||||| ||||||||||| |||||| |||||  |||||  ||     
T  16165716 aagattattagaccacctaaggaattaggggctgtaatctgagaagagggtcctaactcaagggattgattagggctatttt-gttaactatcgttgaat 16165814  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaac 206  Q
    |||||||  ||| |||  || |||||||||| ||| ||||| |||||  | ||  ||||||||||| |  |||||||||||||  | |||||| | ||||    
T  16165815 tagagaatcattaata-caaataggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaac 16165913  T
Q  207 aactttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaat 305  Q
     |  |||||||||| |||||||||||||||||| || || |||| |||||||||||| ||| ||||||||||||||||  |  ||||  ||||| | |||    
T  16165914 tatcttattttctgttatttactttttatgcac-accaatctactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgataaat 16166012  T
Q  306 tgagattaacacggtccttgtgg 328  Q
    |||||||||||| ||||||||||    
T  16166013 tgagattaacacagtccttgtgg 16166035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 10 - 232
Target Start/End: Original strand, 48645441 - 48645663
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||| |||||| ||||| |||||||||||    
T  48645441 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagggctatttt-gttaaccatcgtgaaac 48645539  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaac--a 207  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  | ||  ||||||||||  ||||||||||||||  ||| ||||| ||||  |    
T  48645540 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatcgatgattcgaaagatctagtctcatctctccatatattttccaaacata 48645638  T
Q  208 actttattttctgatatttactttt 232  Q
     |||||||||||| |||||||||||    
T  48645639 tctttattttctgttatttactttt 48645663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 5242298 - 5242116
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||||||||||| |||||||||||||| || ||||| |||||||| ||||||||||||||||| |||| ||| || |||||| ||||| ||| |||||||    
T  5242298 aagaatattagaccacctaaggaattaggggctgtagtctgagaatagggtcctaagtcaagggattggttatggatatttt-gttaaccatagtgaaac 5242200  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||||||  |||| || ||| |||||||||| ||| ||||| ||||| | |||  ||||||||||| |  ||||||||||||||    
T  5242199 tagagaatcattcgtaagaaataggtgcagtataccaattaagggaactcagaagattcgaaagacctgatctcatctctctct 5242116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 361
Target Start/End: Original strand, 7227495 - 7227854
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||||||||||||||  ||||||||||  | |||||||  ||||| ||||||||||||||||| |||||||| ||||||||| ||||| |||||||||||    
T  7227495 aagaatattagatcatataaggaattagaggctgtaattggagaatagggtcctaagtcaagggattgattatggttatttt-gttaaccatcgtgaaac 7227593  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttcta--aaca 207  Q
    |||||||  |||| || ||| |||||||||| ||| ||| | |||||   |||| ||||||||||| |  || ||||||| || || |||||||  || |    
T  7227594 tagagaatcattcgtaagaaataggtgcagtataccaatcaggggaa-ccagaggattcgaaagacctgatcccatctctttccatattttctaataaaa 7227692  T
Q  208 actttattttctgatatttactttttatgca--caa--caaacctaccgcctcgggc-actaaataa-atttacacatcctatttcataacactattgtt 301  Q
     ||||| |||||| ||||||  |||||||||  |||  |||| |||| |||| |||| || ||||||  |||||||||||||||| ||||  ||  || |    
T  7227693 tctttactttctgttatttaaattttatgcaatcaaatcaaatctactgcctagggcaacaaaataacttttacacatcctatttaataaggcttctgct 7227792  T
Q  302 taattgagattaacacggtccttgtggaaacaaac--tttattatattactttgatagtttt 361  Q
    | ||||| |||| |||||||| |||||||||||||  |||| | |||||||| |||||||||    
T  7227793 ttattgatattatcacggtccatgtggaaacaaactttttaatttattacttcgatagtttt 7227854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 42 - 204
Target Start/End: Complemental strand, 13809632 - 13809472
Alignment:
Q  42 tgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattcataggaagtaggtgcagtg 141  Q
    |||||| |||||| ||||||||||||||||| |||||| |||| |||||| ||||| ||||||||||||||||||  |||| ||  || ||||||||||     
T  13809632 tgtaatatgagaagagggtcctaagtcaagggattgatcagggctatttt-gttaaccatcgtgaaactagagaatcattcgtaataaataggtgcagta 13809534  T
Q  142 tacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    ||| ||||| ||||| | |||| ||||||||||| |  |||||||||||||||| ||||||||    
T  13809533 taccaattaagggaa-tcagaggattcgaaagacttgatctcatctctctctatattttctaa 13809472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 271 - 377
Target Start/End: Complemental strand, 18560095 - 18559989
Alignment:
Q  271 tttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacact 370  Q
    |||||||||||||||| ||||  |||||||||| ||||||||||||||||||| |||||| | ||||||||||||| |||| ||||||||||| |||| |    
T  18560095 tttacacatcctatttaataatgctattgtttacttgagattaacacggtcctcgtggaatcgaactttattatatgacttcgatagtttttagtacatt 18559996  T
Q  371 tgctaaa 377  Q
    |||||||    
T  18559995 tgctaaa 18559989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 20594230 - 20594422
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||||||||||||||| ||||||||||  |||||| |||||  ||||||||||    
T  20594230 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaagtcaagggattgattaggactatttt-gttaactatcgtgaaac 20594328  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| || ||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  20594329 tagaaaatcattcataagaa-tacgtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 20594422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 294 - 377
Target Start/End: Complemental strand, 18560910 - 18560827
Alignment:
Q  294 ctattgtttaattgagattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    |||||||||| |||||| ||||| |||||| | ||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  18560910 ctattgtttacttgagaataacatggtcctcgcggaaacaaactttattatattacttcgatagtttttagtacacttgctaaa 18560827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 45290627 - 45290446
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||| |||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  45290627 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggttctaactcaagggattgattaggactatttt-gttaactatcgtggaac 45290529  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| || ||||||||||||||    
T  45290528 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctaatctcatctctctct 45290446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 377
Target Start/End: Complemental strand, 11397994 - 11397829
Alignment:
Q  211 ttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    |||||||||| |||||||||||||||||| || | ||||| |||||||||||| || ||||||||||||||||  |  ||||  ||||| | ||||||||    
T  11397994 ttattttctgttatttactttttatgcac-accatcctactgcctcgggcact-aagaaatttacacatcctagatattaacgttattgctaaattgaga 11397897  T
Q  311 ttaacacggtccttgtggaaacaaactttattatattactttgat-agtttttaatacacttgctaaa 377  Q
    ||||||| ||||| ||||| || ||||| ||| |||||||| |||   |||||| |||||||||||||    
T  11397896 ttaacacagtcctcgtggatacgaacttaattttattacttcgatgcatttttagtacacttgctaaa 11397829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 23225052 - 23224871
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  23225052 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 23224954  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| || ||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||    
T  23224953 tagaaaatcattcataagaa-tatgtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 23224871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 45287216 - 45287035
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||| |||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  45287216 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggttctaactcaagggattgattaggactatttt-gttaactatcgtggaac 45287118  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| || ||  ||||  ||||||||||| || ||||||||||||||    
T  45287117 tagaaaatcattcataagaa-taggtgcagtataccaattagggaaacatagatgattcgaaagacctaatctcatctctctct 45287035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 4546836 - 4546964
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||||||||||||||| |||||||||| ||||||| |||||  |||||| |||    
T  4546836 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaagtcaagggattgattaggattatttt-gttaactatcgtggaac 4546934  T
Q  110 tagagaaatattcataggaagtaggtgcagt 140  Q
    |||| ||  ||||||| ||| ||||||||||    
T  4546935 tagaaaatcattcataagaa-taggtgcagt 4546964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 210 - 377
Target Start/End: Original strand, 26153339 - 26153504
Alignment:
Q  210 tttattttctgatatttacttttta-tgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| |||||  ||||| |  ||||||||||||||||| |  ||||  ||||| | | ||||    
T  26153339 tttattttctgttatttactttttattgcac-acaaacctactgcctcatgcacttataaaatttacacatcctatatattaactttattgctaagttga 26153437  T
Q  309 gattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||| ||||| ||||| || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  26153438 gattaacacagtcctcgtggatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 26153504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 222 - 377
Target Start/End: Complemental strand, 5826639 - 5826487
Alignment:
Q  222 tatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtc 321  Q
    ||||||||||||||||||| ||||||||| ||||| |||||| || ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| |||    
T  5826639 tatttactttttatgcaca-caaacctactgcctcaggcacttaaaaaatttacacatcctagatattaactttattgctaagttgagattaacacagtc 5826541  T
Q  322 cttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    || ||||| |  ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  5826540 ctcgtggataagaac-ttattttattacttcgatag-ttttagtacacttgctaaa 5826487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 222 - 377
Target Start/End: Complemental strand, 11825286 - 11825134
Alignment:
Q  222 tatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtc 321  Q
    ||||||||||||||||||| ||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| |||    
T  11825286 tatttactttttatgcaca-caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtc 11825188  T
Q  322 cttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    || ||||| || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  11825187 ctcgtggatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 11825134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 13842607 - 13842788
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||| | |||||||||| |||||| ||||||||||| |||||| |||||  |||||| ||     
T  13842607 aagattattagaccacctaaggaattaggggctgtagtttgaggagagggtcctaattcaagggattgattagggctatttt-gttaactatcgtggaat 13842705  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||| ||| ||| |||||||||| ||| ||||| |||||| | ||  ||||||||||| |  ||||||||||||||    
T  13842706 tagaaaatcattaatacgaa-taggtgcagtataccaattacgggaatatcgatgattcgaaagacctgatctcatctctctct 13842788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 11920012 - 11919820
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| ||||   |||||| |||    
T  11920012 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttacctatcgtggaac 11919914  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||| ||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  11919913 tagaaaatcattcataagaa-taggtgtagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 11919820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 17730781 - 17730973
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || || || | |||||| |||||||||||| |||| ||||||||||  |||||| |||||  |||||| |||    
T  17730781 aagattattagaccacctaaggaattaggggctatagtttgagaagagggtcctaagttaagggattgattaggactatttt-gttaactatcgtggaac 17730879  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| || ||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  17730880 tagaaaatcattcataagaa-taggtgcagtataccaattagggaaacatagatgattcgaaagacatgatctcatctctcttcatattttctaa 17730973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 26557466 - 26557658
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| |||||||| | |||||| ||||| ||| ||||||| ||||||||||  |||||| |||||  |||||| |||    
T  26557466 aagattattagaccacctaaggaattagggactgtagtttgagaagagggttctatgtcaagggattgattaggactatttt-gttaactatcgtggaac 26557564  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| || ||  ||||  | ||||||||| |  ||||||||||||  || ||||||||    
T  26557565 tagaaaatcattcataagaa-taggtgcagtataccaattagggaaacatagatgactcgaaagacctgatctcatctctcttcatattttctaa 26557658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 232
Target Start/End: Complemental strand, 2441425 - 2441202
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||| | |||||||||||||| |||||||| | |||||| |||||||||| |||||| ||||||||||| |||||| |||||  |||||  ||     
T  2441425 aagattattaaaccacctaaggaattagggactgtagtttgagaagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtagaat 2441327  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatcttttctaaac- 206  Q
    |||| ||  ||| ||| ||| |||||||||| ||| ||||| | |||  | ||  ||||||||||| |  |||||||||||||  ||| ||| | ||||     
T  2441326 tagaaaatcattaatacgaa-taggtgcagtataccaattaggagaacatcgatgattcgaaagacctgatctcatctctctccttatttttccaaaact 2441228  T
Q  207 aactttattttctgatatttactttt 232  Q
    | |||||||||||| |||||||||||    
T  2441227 atctttattttctgttatttactttt 2441202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 4542764 - 4542956
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| || ||||||||||| || ||||| | |||||| ||||| ||| ||||||| |||||||||  ||||||| |||||  |||||| |||    
T  4542764 aagattattagaccaactaaggaattaggggctgtagtttgagaagagggttctaggtcaagggattgattagaattatttt-gttaactatcgtggaac 4542862  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||| ||||| |  ||||||||||||  || ||||||||    
T  4542863 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcggaagacctgatctcatctctcttcatattttctaa 4542956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 328
Target Start/End: Original strand, 6603431 - 6603744
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||| ||||| || ||||| | |||||| |||||||||| |||||| ||||||||||| |||||| |||||  |||||| |||||||     
T  6603431 tattagaccacctaagaaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactagaa 6603529  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaacaactt 211  Q
    ||  ||| ||| ||| |||||||||| ||| ||||| |||||  | ||  ||||||||||| |  |||||||| | ||  | |||||| | |||| |  |    
T  6603530 aatcattaatacgaa-taggtgcagtataccaattaggggaacatcgatgattcgaaagacttgatctcatctttgtccttgtcttttccaaaactatct 6603628  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    ||||||||| ||||||   |||||||| | |||| |||| ||||||| |||| ||| ||||||||||||||||  |  ||||  ||||| | ||||||||    
T  6603629 tattttctgttattta-aatttatgca-atcaaaactactgcctcggacactaaaagaaatttacacatcctagatattaacgttattgctaaattgaga 6603726  T
Q  311 ttaacacggtccttgtgg 328  Q
    ||||||| ||||| ||||    
T  6603727 ttaacacagtcctcgtgg 6603744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 8276953 - 8277145
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || || || | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  8276953 aagattattagaccacctaaggaattaggggctatagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 8277051  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||| | ||| ||||| |||||  ||||   |||||||||| |  ||||||||||||  || ||||||||    
T  8277052 tagaaaatcattcataagaa-taggtgcattataccaattaggggaacatagatgcttcgaaagacctgatctcatctctcttcatattttctaa 8277145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 9864868 - 9864771
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactaga 113  Q
    ||||||| |||||||||||||||||  |||| | |||||| |||||||||| |||||| ||||||||||| |||||| |||||  |||||| |||||||    
T  9864868 tattagaccacctaaggaattatgggttgtagtttgagaagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactaga 9864771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 189
Target Start/End: Original strand, 4695494 - 4695625
Alignment:
Q  56 agggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattcataggaagtaggtgcagtgtacaaattatggga 155  Q
    ||||||||||||||||| ||||||||||  |||||| |||||  |||||| ||||||| ||  ||| ||| ||| |||||||||| ||| ||||| ||||    
T  4695494 agggtcctaagtcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattgataagaa-taggtgcagtataccaattagggga 4695591  T
Q  156 atttagagaattcgaaagacgtagtctcatctct 189  Q
    || ||||  ||||||||||| | |||||||||||    
T  4695592 atatagatgattcgaaagacctggtctcatctct 4695625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 377
Target Start/End: Original strand, 8398021 - 8398170
Alignment:
Q  225 ttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtcctt 324  Q
    ||||||||||| |||| ||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| |||||     
T  8398021 ttactttttatccaca-caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctc 8398119  T
Q  325 gtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||| || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  8398120 gtggatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 8398170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 14683586 - 14683412
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||| ||||||| || ||||||||  |||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||| |||||| |    
T  14683586 tattagaccacctatggaattaggggctgtaatcctagaagagggtcctaactcaagggattgattatgactatttt-gttaactatcgtggaactagtg 14683488  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctct 191  Q
    ||  ||||||| ||| ||| |||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||    
T  14683487 aatcattcataagaa-tagatgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 14683412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 9132902 - 9132727
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||| |||||| |    
T  9132902 tattagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgattatgactatttt-gttaactatcgtggaactagtg 9132804  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    ||  ||||||| ||| || ||||||| ||| ||||| |||||  ||||  ||||||||||| ||  |||||||||||||    
T  9132803 aatcattcataagaa-tatgtgcagtataccaattaggggaacatagatgattcgaaagaccta-actcatctctctct 9132727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 13449923 - 13449743
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || || || | |||||| |||||||||| |||||| ||||||||| | |||||| |||||  |||||| |||    
T  13449923 aagattattagaccacctaaggaattaagggctttagtttgagaagagggtcctaactcaagggattgattagagctatttt-gttaactatcgtggaac 13449825  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc 192  Q
    |||| ||  ||| ||| ||| |||||||||| ||| ||||| ||||   | ||  ||||||||||| |  |||||||||||||    
T  13449824 tagaaaatcattaatacgaa-taggtgcagtataccaattaggggaccatcgatgattcgaaagacctgttctcatctctctc 13449743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 37415572 - 37415389
Alignment:
Q  10 aagaatattagatcacctaagg--aattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaa 107  Q
    |||| ||||||| |||||||||  ||||| || ||||| | |||||| ||||| |||| |||||  ||||||||||  |||||| |||||  ||| || |    
T  37415572 aagattattagaccacctaaggggaattaggggctgtagtttgagaagagggttctaactcaagagattgattaggactatttt-gttaactatcatgga 37415474  T
Q  108 actagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||||||||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||    
T  37415473 actagagaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 37415389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 4596156 - 4595964
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| || ||||||||||| || ||||| | |||||| |||||| |||||||||| |||||||| |  ||||||  ||||  |||||| |||    
T  4596156 aagattattagaccaactaaggaattaggggctgtagtttgagaagagggtcttaagtcaagggattgattatgactatttt-tttaactatcgtggaac 4596058  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| || ||| ||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  4596057 tagaaaatcattcataagaa-tatgtgaagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 4595964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 156
Target Start/End: Complemental strand, 9271612 - 9271468
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||| ||||| |||||| ||||||||||  ||||||  ||||  |||||| |||    
T  9271612 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggacctaactcaagggattgattaggagtatttt-cttaactatcgtggaac 9271514  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaa 156  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||    
T  9271513 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaa 9271468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 10469116 - 10469292
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| ||  ||||| |  |||| |||||||||| |||||| ||||||||||  ||||||  ||||  ||| || |||||||     
T  10469116 tattagaccacctaaggaattaggggttgtaaccctagaagagggtcctaactcaagggattgattaggactatttt-tttaactatcatggaactagaa 10469214  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    ||  ||||| | ||| |||||||||||||| ||||| |||||  ||||  ||||||||||  ||  |||||||||||||    
T  10469215 aagaattcacaagaa-taggtgcagtgtactaattaggggaacatagatgattcgaaagatctaaactcatctctctct 10469292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 8258073 - 8258223
Alignment:
Q  210 tttattttctgatatttacttttta-tgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    ||||||||||| ||||||||||||| | ||| ||||||||||  |||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||    
T  8258073 tttattttctgttatttactttttattacac-acaaacctactacctcaggcacttataaaatttacacatcctagatattaactttattgctaagttga 8258171  T
Q  309 gattaacacggtccttgtggaaacaaactttattatattactttgatagtttt 361  Q
    ||||||||| ||||| || || || ||| ||||| |||||||| |||||||||    
T  8258172 gattaacacagtcctcgtagatacgaac-ttattttattacttcgatagtttt 8258223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 377
Target Start/End: Complemental strand, 22232533 - 22232405
Alignment:
Q  247 ctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtggaaacaaactttattatat 346  Q
    |||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| ||||| ||||| || ||| ||||| |||    
T  22232533 ctactgcctcaggcacttataaaatttacacatcctagatattaaccttattgctaagttgagattaacacagtcctcgtggatacgaac-ttattttat 22232435  T
Q  347 tactttgatagtttttaatacacttgctaaa 377  Q
    ||||| ||||| ||||| |||||||||||||    
T  22232434 tacttcgatag-ttttagtacacttgctaaa 22232405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 377
Target Start/End: Original strand, 22254206 - 22254334
Alignment:
Q  247 ctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtggaaacaaactttattatat 346  Q
    |||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| ||||| ||||| || ||| ||||| |||    
T  22254206 ctactgcctcaggcacttataaaatttacacatcctagatattaaccttattgctaagttgagattaacacagtcctcgtggatacgaac-ttattttat 22254304  T
Q  347 tactttgatagtttttaatacacttgctaaa 377  Q
    ||||| ||||| ||||| |||||||||||||    
T  22254305 tacttcgatag-ttttagtacacttgctaaa 22254334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 3068119 - 3068051
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagg 83  Q
    ||||||| |||||||||||||| ||  ||||| |  |||| |||||||||| |||||| ||||||||||    
T  3068119 tattagaccacctaaggaattaggggttgtaaccctagaagagggtcctaactcaagggattgattagg 3068051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 102; Significance: 2e-50; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 10 - 377
Target Start/End: Complemental strand, 118587 - 118222
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||||||| |||||||||||| |||||||| | | ||| ||||||||||||||||| ||||||||| | |||||| |||||  ||| ||||||    
T  118587 aagaatattagatcatctaaggaattatagactgtaacccgcgaagagggtcctaagtcaagggattgattagtgctatttt-gttaactatcctgaaac 118489  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttcta-aacaa 208  Q
    ||| |||  ||||||| ||| ||||||||||| || ||||| |||||   |||| ||||||||||| |  | |||||||||   |||||||| | ||| |    
T  118488 tagcgaatcattcataagaa-taggtgcagtggaccaattaagggaaac-agaggattcgaaagacctgatatcatctctcctcatcttttccagaacta 118391  T
Q  209 ctttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaat-aaatttacacatcctatttcataacactattgtttaattg 307  Q
      |||||||||| ||||||||||| ||||| ||||||| ||| |||||||||||||||  ||||||||||||||||  | |||||  ||||||| |||||    
T  118390 tcttattttctgttatttactttt-atgcataacaaacatactgcctcgggcactaaaagaaatttacacatcctagataataactttattgttgaattg 118292  T
Q  308 agattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||||  |||| ||||| || |||||  || |||||||| ||||||||||| |||||||| ||||    
T  118291 agattaacacaatcctcgtggatacgaacttatttttattacttcgatagtttttagtacacttgttaaa 118222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 75 - 377
Target Start/End: Complemental strand, 99312 - 99008
Alignment:
Q  75 ttgattagggttattttagttaatcatcgtgaaactagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaaga 174  Q
    ||||||| || |||||| |||||  |||||||||||||||||  ||||||| ||| ||||||||||| || |||||  ||||   | ||| || ||||||    
T  99312 ttgattatggctatttt-gttaactatcgtgaaactagagaatcattcataagaa-taggtgcagtgaaccaattagaggaaacaaaagattt-gaaaga 99216  T
Q  175 cgtagtctcatctctctctatcttttctaaa-caactttattttctgatatttactttttatgcacaacaaacctaccgcctcg----ggcactaaat-a 268  Q
    | | ||||||||||||   |||||||| ||| | |  |||||||||| ||||||||||| || |||||||||||||| ||||||    |||||||||  |    
T  99215 cctggtctcatctctcctcatcttttccaaaactatcttattttctgttatttactttt-atacacaacaaacctactgcctcgatcgggcactaaaaga 99117  T
Q  269 aatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaataca 368  Q
    |||||||||||| ||  | |||||  ||||| | |||||||||||||||  |||| || || || || ||  || |||||||| |||| |||||| ||||    
T  99116 aatttacacatcatagataataactttattgctaaattgagattaacaccatcctcgtagatacgaaattatttttattacttcgataatttttagtaca 99017  T
Q  369 cttgctaaa 377  Q
    |||||||||    
T  99016 cttgctaaa 99008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 10 - 201
Target Start/End: Original strand, 4868230 - 4868420
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| ||||||||||| || ||||||||| |||||||||||    
T  4868230 aagaatattagatcacctaaggaattatgaactgtaatccgagaagagggtcctaagtcaagggattgattagggcta-tttagttaaccatcgtgaaac 4868328  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttc 201  Q
    || || | |||| ||||||| |||||||||| ||| ||  |||| |  |  ||| ||||||||||| ||||||||||||| | |||||||||    
T  4868329 tataggagtattaataggaaataggtgcagtataccaaacatggaacatcggaggattcgaaagacctagtctcatctctatatatcttttc 4868420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 377
Target Start/End: Complemental strand, 33883492 - 33883123
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| ||||| |||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  33883492 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggttctaactcaagggattgattatgactatttt-gttaactatcgtggaac 33883394  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctca--tctctctctatcttttctaaa-- 205  Q
    |||||||  ||||||| ||| |||||||||| ||| ||||| || ||  ||||  ||||||||||| ||  ||||  ||||||| ||||||||| |||      
T  33883393 tagagaatcattcataagaa-taggtgcagtataccaattagggaaacatagatgattcgaaagacttaaactcacctctctctttatcttttccaaaac 33883295  T
Q  206 caactttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaa 304  Q
     | |||||||||||| |||||||||||||| ||| || |||||||  ||| ||||||| ||| ||||||||||||||||| |  ||||  ||||| | ||    
T  33883294 tatctttattttctgttatttactttttatacac-accaacctactaccttgggcactaaaagaaatttacacatcctatatattaac-gtattgctaaa 33883197  T
Q  305 ttgagattaacacggtccttgtggaaacaaactttattatattactttgat-agtttttaatacacttgctaaa 377  Q
    ||||||||||||| ||||| ||||| || ||||| ||| |||||||| |||   |||||| |||||||||||||    
T  33883196 ttgagattaacacagtcctcgtggatacgaacttaattttattacttcgatgcatttttagtacacttgctaaa 33883123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 328
Target Start/End: Original strand, 16953759 - 16954072
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| | |||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||||||     
T  16953759 tattagaccgcctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaactagaa 16953857  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct--atcttttctaaac-aactt 211  Q
    ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||   ||||| | |||| | |||    
T  16953858 aatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaaaactatctt 16953956  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagat 311  Q
    ||| ||||| ||||||  ||||||||| | |||| |||| ||||| |||||||||  |||||||||||||||  |  ||||  ||||||| |||||||||    
T  16953957 tatattctgttattta-attttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaacgttattgttgaattgagat 16954055  T
Q  312 taacacggtccttgtgg 328  Q
    |||||| ||||| ||||    
T  16954056 taacacagtcctcgtgg 16954072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 377
Target Start/End: Complemental strand, 45155411 - 45155041
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  | || | |||||| |||||| ||| |||||| ||||||||||  |||||| |||||  |||| |||||    
T  45155411 aagattattagaccacctaaggaattaggggttttagtttgagaagagggtcttaactcaagggattgattaggactatttt-gttaactatcgcgaaac 45155313  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatcttttctaaac- 206  Q
    |||||||  ||||||| ||| |||||||| | ||| ||||| |||||  ||||  ||||||||||| |  ||||| |||||||  ||||||||| |||      
T  45155312 tagagaatcattcataagaa-taggtgcaatataccaattaggggaacatagatgattcgaaagacctgatctcagctctctccttatcttttccaaaac 45155214  T
Q  207 -aactttattttctgat-atttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaa 304  Q
     | |||||||||||| | ||||| |||| ||||| | |||| |||| |||||||||||||||  |||||||||||||||  |  ||||  ||||| | ||    
T  45155213 tatctttattttctgtttatttaatttt-atgca-atcaaaactactgcctcgggcactaaaataatttacacatcctagatattaaccttattgctaaa 45155116  T
Q  305 ttgagattaacacggtccttgtggaaacaaactt---tattatattactttgatagtttttaatacacttgctaaa 377  Q
    |||||||||||||||||| |||||| || |||||    ||| |||||||| ||||| ||||| |||||||||||||    
T  45155115 ttgagattaacacggtccctgtggatacgaacttataaattttattacttcgatag-ttttagtacacttgctaaa 45155041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 30784907 - 30785078
Alignment:
Q  21 atcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatat 120  Q
    ||||||||||||||||  |||||||||| ||||| ||||||||| ||| | | |||||||||||||||||| |||||  |||||||||||||||||  ||    
T  30784907 atcacctaaggaattagagactgtaatccgagaagagggtcctacgtccatggattgattagggttatttt-gttaactatcgtgaaactagagaatcat 30785005  T
Q  121 tcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    || || ||| ||||| || | ||| ||||| ||||| |||||| ||||||||||| |  ||||| ||||||||    
T  30785006 tcgtaagaaataggtacaatataccaattaggggaacttagaggattcgaaagacctgatctcacctctctct 30785078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 338
Target Start/End: Complemental strand, 36710773 - 36710450
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| ||||||||||| |||||| |||||  |||||| |||||||     
T  36710773 tattagaccacctaaggaattaggggttgtagtttgagaagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactagaa 36710675  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaacaactt 211  Q
    ||  ||| ||| ||| |||||||||| ||| ||||| |||||  | ||  ||||||||||| |  |||||||||||||  | |||||| | |||| |  |    
T  36710674 aatcattaatacgaa-taggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatct 36710576  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    |||||| || |||||||||||||||||| || ||||||| |||| ||||||| ||| ||||||||||||||||  |  |||   ||||| | ||||||||    
T  36710575 tatttt-tgttatttactttttatgcac-accaacctactgccttgggcactaaaagaaatttacacatcctagatattaaatttattgctaaattgaga 36710478  T
Q  311 ttaacacggtccttgtggaaacaaactt 338  Q
    ||||||| |||| |||||| || |||||    
T  36710477 ttaacacagtccctgtggatacgaactt 36710450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 75 - 377
Target Start/End: Complemental strand, 14589698 - 14589396
Alignment:
Q  75 ttgattagggttattttagttaatcatcgtgaaactagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaaga 174  Q
    |||||||||| |||||| |||||  |||||| ||||||| ||  ||| ||| ||| |||||||||| ||| ||||| |||||  | ||  |||||||| |    
T  14589698 ttgattagggctatttt-gttaacgatcgtggaactagaaaatcattaatacgaa-taggtgcagtataccaattaggggaacatcgatgattcgaaata 14589601  T
Q  175 cgtagtctcatctctctc--tatcttttctaaa-caactttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcactaaat-aaa 270  Q
    | || |||||||||||||  | ||||||| ||| | |  ||||||| || ||||||||||||||||||| ||| ||||| |||||||||||||||  |||    
T  14589600 cctaatctcatctctctccttgtcttttccaaaactatcttattttatgttatttactttttatgcacaccaa-cctactgcctcgggcactaaaagaaa 14589502  T
Q  271 tttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacact 370  Q
    |||||||||||||     ||||| ||||| | ||||||||||||||| ||||| ||| | || ||||| ||| |||||||| ||||  ||||| ||||||    
T  14589501 tttacacatcctacacattaacattattgctaaattgagattaacacagtcctcgtgaatacgaacttaattttattacttcgata-attttagtacact 14589403  T
Q  371 tgctaaa 377  Q
    |||||||    
T  14589402 tgctaaa 14589396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 12516595 - 12516413
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||||||| ||||||||||| ||| |||||||| |||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  12516595 aagaatattagatcaactaaggaattagggattgtaatctaagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 12516497  T
Q  110 tagagaaatatt-cataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||| || | ||| |||||||||| ||| ||||| |||||| ||||  ||||||||||| |  | ||||||||||||    
T  12516496 tagaaaaccattccaaaagaa-taggtgcagtataccaattaggggaatatagatgattcgaaagacctgatttcatctctctct 12516413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 328
Target Start/End: Complemental strand, 18824531 - 18824218
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||| |||||| |||||  |||||| |||||||     
T  18824531 tattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactagaa 18824433  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaacaactt 211  Q
     |  ||| ||| ||| |||||||||| ||| ||||| |||||  | ||  |||||||| || |  |||||||||||||  | |||||| | |||| |  |    
T  18824432 gatcattaatacgaa-taggtgcagtataccaattaggggaacatcgatgattcgaaatacctgatctcatctctctccttttcttttccaaaactatct 18824334  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    ||||||||| ||||||   |||||||| | |||| |||| |||||||||||| ||| ||||||||||||||||  |  ||||  ||||| | ||||||||    
T  18824333 tattttctgttattta-aatttatgca-atcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgaga 18824236  T
Q  311 ttaacacggtccttgtgg 328  Q
    ||||||| ||||| ||||    
T  18824235 ttaacacagtcctcgtgg 18824218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 283
Target Start/End: Complemental strand, 25591621 - 25591347
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| || ||||||||||| || ||||| | |||||| || ||| ||| |||||| ||||||||||  |||||| |||||  ||||||||||    
T  25591621 aagattattagaccatctaaggaattaggggctgtagtttgagaagagagtcttaactcaagggattgattaggactatttt-gttaactatcgtgaaac 25591523  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaa--ca 207  Q
    |||| ||  |||||||  || |||||||||| ||| ||||| |||||  ||||  |||||||| || |  ||||||||||||   ||||||| |||   |    
T  25591522 tagaaaatcattcata-aaaataggtgcagtataccaattaggggaacatagatgattcgaaacacctgatctcatctctcttattcttttccaaaacta 25591424  T
Q  208 actttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatccta 283  Q
     |||||| |||||  ||||||||||||||||| | |||| ||||  |||| |||||||||  |||||||||||||||    
T  25591423 tctttatattctgtttatttactttttatgcaaatcaaaactactacctcaggcactaaaataatttacacatccta 25591347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 191
Target Start/End: Complemental strand, 25594799 - 25594620
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| || |||||||||||||| ||||| | |||||| || ||| ||| |||||| ||||||||||  |||||| |||||  ||||||||||    
T  25594799 aagattattagaccatctaaggaattatgggctgtagtttgagaagagagtcttaactcaagggattgattaggactatttt-gttaactatcgtgaaac 25594701  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctct 191  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||    
T  25594700 tagaaaatcattcataagaa-taggtgcagtatactaattaggggaagatagatgattcgaaagacctgatctcatctctct 25594620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 43682012 - 43681834
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||| ||||||| ||||||| |||||||||| |||||| |||||||||| |||||| ||||||||||  |||||| |||||  || ||| |||    
T  43682012 aagaatattagctcacctacggaattagggactgtaatatgagaagagggtcctaactcaagggattgattaggactatttt-gttaactattgtggaac 43681914  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctc 190  Q
    |||| ||  ||||||| ||| || ||| ||| ||| ||||| |||||  | ||  | ||||||||| ||||||||||||||    
T  43681913 tagaaaatcattcataagaa-taagtgtagtataccaattaggggaaccttgaagactcgaaagacctagtctcatctctc 43681834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 192
Target Start/End: Complemental strand, 18826024 - 18825849
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||| |||||| |||||  |||||| |||||||     
T  18826024 tattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactagaa 18825926  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc 192  Q
     |  ||| ||| ||| |||||||||| ||| ||||| |||||  | ||  ||||||||||| |  |||||||||||||    
T  18825925 gatcattaatacgaa-taggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctc 18825849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 377
Target Start/End: Original strand, 30645660 - 30645825
Alignment:
Q  210 tttattttctgatatttactttttat-gcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    ||||||||||| |||||||||||||| ||||| ||||||||| ||||| |||||| |  ||||||||||||||||| |  | ||  ||||| | | ||||    
T  30645660 tttattttctgttatttactttttattgcaca-caaacctactgcctcaggcacttataaaatttacacatcctatatatttactttattgctaagttga 30645758  T
Q  309 gattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||| ||||| ||||| || ||| ||||| |||||||| ||||  ||||| |||||||||||||    
T  30645759 gattaacacagtcctcgtggatacgaac-ttattttattacttcgata-attttagtacacttgctaaa 30645825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 17930958 - 17931139
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||| ||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  17930958 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcgtaactcaagggattgattaagactatttt-gttaactatcgtggaac 17931056  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||||||  ||||||| ||| |||||||| | ||| ||||| || ||  | ||  ||||||||||| || ||||||||||||||    
T  17931057 tagagaatcattcataagaa-taggtgcaatataccaattacggaaacatcgatgattcgaaagacctaatctcatctctctct 17931139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 18721423 - 18721246
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| || ||||| ||||| || ||||| | |||||| || ||| ||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  18721423 aagattattagaccaactaagaaattaggggctgtagtatgagaagagagtcataactcaagggattgattaggactatttt-gttaactatcgtggaac 18721325  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctct 189  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |||||||||||||    
T  18721324 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctagtctcatctct 18721246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 10498351 - 10498175
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| ||||||||||  |||||| |||||  ||||| ||||||| |    
T  10498351 tattagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtaaaactaggg 10498253  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |   ||||| | ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| ||  |||||||||||||    
T  10498252 actcattcacaagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 10498175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 210
Target Start/End: Complemental strand, 5980455 - 5980258
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||| ||||| |||||||| | |||||| |||||||||| |||||| |||||||| |  |||||| |||||  || ||| |||    
T  5980455 aagattattagaccacctaagaaattacggactgtagtttgagaagagggtcctaactcaagggattgattatgactatttt-gttaactattgtggaac 5980357  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaac 209  Q
    |||| ||  || |||| ||| |||||| ||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||| || |||||||| ||||    
T  5980356 tagaaaatcatccataagaa-taggtgtagtataccaattaagggaacatagatgattcgaaagacatgatctcatctctctc-atattttctaatcaac 5980259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 377
Target Start/End: Original strand, 31981535 - 31981700
Alignment:
Q  210 tttattttctgatatttactttttat-gcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    ||||||||||| |||||||||||||| ||||| ||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||    
T  31981535 tttattttctgttatttactttttattgcaca-caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttga 31981633  T
Q  309 gattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||| |||||  | || || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  31981634 gattaacacagtcctcatagatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 31981700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 377
Target Start/End: Original strand, 31986462 - 31986627
Alignment:
Q  210 tttattttctgatatttacttttta-tgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    ||||||||||| ||||||||||||| ||||||| |||||||| ||||| | |||| |  ||||||||||||||||  |  ||||  ||||| | | ||||    
T  31986462 tttattttctgttatttactttttattgcacaa-aaacctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttga 31986560  T
Q  309 gattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||| ||||| ||| | || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  31986561 gattaacacagtcctcgtgcatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 31986627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 377
Target Start/End: Original strand, 5964444 - 5964596
Alignment:
Q  222 tatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtc 321  Q
    |||||||||||||||||| |||||||||| | ||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| |||    
T  5964444 tatttactttttatgcac-acaaacctactgtctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtc 5964542  T
Q  322 cttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||  |||| || ||| ||||| |||||||| ||||| ||||||||||||| |||||    
T  5964543 ctcatggatacgaac-ttattttattacttcgatag-ttttaatacacttactaaa 5964596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 12582985 - 12583180
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||| | |||||||||||||| ||  |||| | |||||| ||||||||||||||||| ||||||||||  |||||| || ||  |||||| |||    
T  12582985 aagattattacaccacctaaggaattaggggttgtagtttgagaagagggtcctaagtcaagggattgattaggactatttt-gtcaactatcgtggaac 12583083  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttag---agaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  |||   |  ||||||||||| | |||||||||||||  || ||||||||    
T  12583084 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatcatgattcgaaagacctggtctcatctctcttcatattttctaa 12583180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 23643797 - 23643911
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| ||||||||||||||  | |||||||||||||| |||||| ||| |||||  ||||||||||  |||||| |||||  |||||| |||    
T  23643797 aagattattagaccacctaaggaattagaggctgtaatctgagaagagggtcataactcaagagattgattaggactatttt-gttaactatcgtggaac 23643895  T
Q  110 tagagaaatattcata 125  Q
    |||||||  |||||||    
T  23643896 tagagaatcattcata 23643911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 204
Target Start/End: Complemental strand, 5613858 - 5613668
Alignment:
Q  13 aatattagatcacctaaggaattatggactgta--atctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaact 110  Q
    ||||||| | |||||||||||||| || || ||  ||||||||| ||||||||||||||||| ||| ||||||  |||| | |||||  |||||||||||    
T  5613858 aatattataccacctaaggaattaggggctatataatctgagaagagggtcctaagtcaagggatttattaggactattat-gttaactatcgtgaaact 5613760  T
Q  111 agagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    ||||||  ||||||| ||| || |||  |||| | ||||| |||||   |||| ||||||||||| |  ||||||||||||| || ||||||||    
T  5613759 agagaatcattcataagaa-tatgtgatgtgtgccaattaggggaa-acagaggattcgaaagacctgatctcatctctctccatattttctaa 5613668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 25231063 - 25231239
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||| |||||||||  | || || | |||||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||| ||||||||    
T  25231063 tattagaacacccaaggaattagaggctttagtttgagaagagggtcctaactcaagggattgattaagactatttt-gttaactatcgtggaactagag 25231161  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||| ||||||||    
T  25231162 aatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcaactctctct 25231239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 33419638 - 33419814
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| ||| |||||||||| ||  ||||| |  |||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||| |||||| |    
T  33419638 tattagaccacataaggaattaggggttgtaaccctagaagagggtcctaactcaagggattgattatgaatatttt-gttaactatcgtggaactagtg 33419736  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    ||  ||||||| ||| |||||||||| ||||||||| |||||  || |  ||||||||||| ||  |||||||||||||    
T  33419737 aatcattcataagaa-taggtgcagtatacaaattaggggaacataaatgattcgaaagacctaaactcatctctctct 33419814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 377
Target Start/End: Original strand, 14188361 - 14188511
Alignment:
Q  224 tttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtcct 323  Q
    |||||||||||| |||| ||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||| | |||||    
T  14188361 tttactttttatacaca-caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacgcagtcct 14188459  T
Q  324 tgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
     ||||| || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  14188460 cgtggatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 14188511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 22174065 - 22173984
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttatttt 91  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| |||||||||| |||||| ||||||||||| ||||||    
T  22174065 aagattattagaccacctaaggaattaggggttgtagtttgagaagagggtcctaactcaagggattgattagggctatttt 22173984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 14421722 - 14421904
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||| ||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  14421722 aagattatcagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 14421820  T
Q  110 tagagaaatattca-taggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    || | ||  ||||| || ||| |||||||||| ||  ||||| |||||  ||||  ||||||||||| |  ||||||||||||||    
T  14421821 taaaaaatcattcagtaagaa-taggtgcagtatatcaattaggggaacatagatgattcgaaagacctgatctcatctctctct 14421904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 10663876 - 10664057
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||| |||| |||||| ||||||||||  |||||| |||||  ||| |  |||    
T  10663876 aagattattagaccacctaaggaattaagggctgtagtttgagaagagggttctaactcaagggattgattaggactatttt-gttaactatcatagaac 10663974  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||||||  ||||||| ||| |||||| ||| ||| ||||| || ||  ||||  | ||||||||| |  ||||||||||||||    
T  10663975 tagagaatcattcataagaa-taggtgtagtataccaattagggaaacatagatgactcgaaagacctgatctcatctctctct 10664057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 156
Target Start/End: Complemental strand, 21279911 - 21279767
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | | |||| || ||| ||| |||||| ||||||||||  |||||| |||||  ||| || |||    
T  21279911 aagattattagaccacctaaggaattaggggctgtagtttaagaagagagtcttaactcaagggattgattaggactatttt-gttaactatcatgtaac 21279813  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaa 156  Q
    |||||||  ||||||| ||| |||||||||| ||| ||||| |||||    
T  21279812 tagagaatcattcataagaa-taggtgcagtataccaattaggggaa 21279767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 361
Target Start/End: Original strand, 20262743 - 20262880
Alignment:
Q  222 tatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtc 321  Q
    |||||||||||||||||| |||||||||| ||||  |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| |||    
T  20262743 tatttactttttatgcac-acaaacctactgcctgaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtc 20262841  T
Q  322 cttgtggaaacaaactttattatattactttgatagtttt 361  Q
     | ||||| || ||| ||| | |||||||| |||||||||    
T  20262842 ttcgtggatacgaac-ttactgtattacttcgatagtttt 20262880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 361
Target Start/End: Original strand, 21049373 - 21049510
Alignment:
Q  222 tatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtc 321  Q
    |||||||||||||||||| |||||||||| ||||  |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| |||    
T  21049373 tatttactttttatgcac-acaaacctactgcctgaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtc 21049471  T
Q  322 cttgtggaaacaaactttattatattactttgatagtttt 361  Q
     | ||||| || ||| ||| | |||||||| |||||||||    
T  21049472 ttcgtggatacgaac-ttactgtattacttcgatagtttt 21049510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 38248541 - 38248360
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |  ||||||| |||||  ||||||||||  |||||| ||||   |||||| |||    
T  38248541 aagattattagaccacctaaggaattaggggctgtagtttgagaagaatgtcctaactcaagagattgattaggactatttt-gttagctatcgtggaac 38248443  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||||||  ||||||| ||| || ||||| | ||| ||||| |||||  ||||  ||||||||||| |  || |||||||||||    
T  38248442 tagagaatcattcataagaa-tatgtgcaatataccaattaggggaacatagatgattcgaaagacctgatcgcatctctctct 38248360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 2560530 - 2560668
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcct-aagtcaaggtattgattagggttattttagttaatcatcgtgaaa 108  Q
    |||| ||||||| |||||||||||||||||  ||||||||||||| || ||| | || |||||  |||||||| || |||||| |||||  |||||| ||    
T  2560530 aagattattagaccacctaaggaattatgg-gtgtaatctgagaagagagtcttaaactcaagtgattgattatggctatttt-gttaactatcgtggaa 2560627  T
Q  109 ctagagaaatattcataggaagtaggtgcagtgtacaaatta 150  Q
    ||||| ||  ||||||| ||| |||||||||| ||| |||||    
T  2560628 ctagataatcattcataagaa-taggtgcagtataccaatta 2560668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 338
Target Start/End: Complemental strand, 37681430 - 37681333
Alignment:
Q  242 caaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggt-ccttgtggaaacaaactt 338  Q
    |||| |||||||||||  |||||||  |||||||||||||||  |  ||||  ||||||| ||||||||||||||| || || |||||| ||||||||    
T  37681430 caaaactaccgcctcgaacactaaaataatttacacatcctagatagtaaccttattgttaaattgagattaacacagtcccctgtggatacaaactt 37681333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 31284656 - 31284724
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagg 83  Q
    ||||||| |||||||||||||| ||  ||||| |  |||| |||||||||| |||||| ||||||||||    
T  31284656 tattagaccacctaaggaattaggggatgtaaccctagaagagggtcctaactcaagggattgattagg 31284724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 44027230 - 44027162
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagg 83  Q
    ||||||| |||||||||||||| ||  ||||| |  |||| |||||||||| |||||| ||||||||||    
T  44027230 tattagaccacctaaggaattaggggttgtaaccctagaagagggtcctaactcaagggattgattagg 44027162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 378
Target Start/End: Complemental strand, 48545 - 48181
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||| ||||||||| ||||||| |||||||| |  |||||||||| | |||||||||||    
T  48545 aagaatattggatcacctaaggaattagggaccgtaatctgagaagagggtcctacgtcaagggattgattatgactattttagttgaccatcgtgaaac 48446  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaacaa- 208  Q
    |||||||||||| ||||||| |||||||||| ||| ||  ||   || | |||| ||| ||| ||| ||||||||||||||  ||| ||||||||||||     
T  48445 tagagaaatatttataggaaataggtgcagtatactaaaaat---aaatcagaggatttgaatgacctagtctcatctctccatatattttctaaacaac 48349  T
Q  209 ctttattttctg-atatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattg 307  Q
    |||||| ||| |  ||||||| ||||||||| | ||||||||| ||||| |  ||| |  |||| ||||||||||  ||  ||||  ||||| | |||||    
T  48348 ctttatattccgtttatttac-ttttatgca-atcaaacctactgcctcagaaacttataaaatatacacatcctcgttattaaccttattgctaaattg 48251  T
Q  308 agattaacacggtccttgtggaaacaaactt-tattatattactttgatagtttttaatacacttgctaaat 378  Q
    |||||||||| ||| | ||||| || ||||| |||| ||||||||  |||| ||||| ||||||||||||||    
T  48250 agattaacacagtcatcgtggatacgaacttatatt-tattacttcaatag-ttttagtacacttgctaaat 48181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 15 - 377
Target Start/End: Original strand, 89755 - 90118
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || ||||| | |||||| || ||||||| |||||| ||||||||||| |||||| |||||  |||||| |||||||     
T  89755 tattagaccacctaaggaattaggggctgtagtttgagaagagagtcctaactcaagggattgattagggctatttt-gttaactatcgtggaactagaa 89853  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc--tatctttt-ctaaacaactt 211  Q
    ||  ||| ||| ||| || ||||||| ||| ||||| ||||| |||||  ||||||||||| |  |||||||||||||  | | |||| | |||| |  |    
T  89854 aatcattaatacgaa-tatgtgcagtataccaattaggggaacttagatgattcgaaagacctgatctcatctctctccttgtgttttccaaaactatct 89952  T
Q  212 tattttctgatatttactttttatgcacaacaaacctaccgcctcgggcact-aaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    ||||||||| ||||| |||||||||||| || ||||||| ||||| |||||| ||| ||||||||||||||||  |  ||||  ||||| | ||||||||    
T  89953 tattttctgttatttgctttttatgcac-accaacctactgcctcaggcactaaaacaaatttacacatcctagatattaacgttattgctaaattgaga 90051  T
Q  311 ttaacacggtccttgtggaaacaaactttattatattactttgat-agtttttaatacacttgctaaa 377  Q
    ||||||| ||||| ||||| |||||| ||||| |||||||| |||   |||||| |||||||||||||    
T  90052 ttaacacagtcctcgtggatacaaac-ttattttattacttcgatgcatttttagtacacttgctaaa 90118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 3424 - 3246
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||| ||||| |||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  3424 aagaatattagctcacctaaggaattagggactgtaatatgagaagagggttctaactcaagggattgattaggactatttt-gttaactatcgtggaac 3326  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctc 190  Q
    |||| ||  ||||||| ||| |||||||| | ||| |||||||||||  | ||  | ||||||||| ||||||||||||||    
T  3325 tagaaaatcattcataagaa-taggtgcattataccaattatgggaacattgatgactcgaaagacctagtctcatctctc 3246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 328
Target Start/End: Original strand, 111 - 431
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||| ||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  111 aagattattagaccacctaagaaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 209  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct--atcttttctaaaca 207  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||   ||||| | |  |     
T  210 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacttgatctcatctctctctcattctttccaactct 308  T
Q  208 actttattttctgatatttactttttatgcacaacaaacctaccgcctcgggc-act-aaataaatttacacatcctatttcataacactattgtttaat 305  Q
    |  |||||||||| |||||||||||||| || | |||| |||| |||| |||| ||| ||| ||||||||||||||||  |  ||||  ||||| | |||    
T  309 atcttattttctgttatttactttttatacaaaccaaaactactgcctagggcaactaaaagaaatttacacatcctagatattaacgttattgctaaat 408  T
Q  306 tgagattaacacggtccttgtgg 328  Q
    |||||||||||| ||||| ||||    
T  409 tgagattaacacagtcctcgtgg 431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 232
Target Start/End: Original strand, 62497 - 62717
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  62497 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 62595  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaaac-aa 208  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  |||| ||||||| | ||||| | |||| |     
T  62596 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctc-tctctctttttctttccaaaactat 62693  T
Q  209 ctttattttctgatatttactttt 232  Q
    |||||||||||| |||||||||||    
T  62694 ctttattttctgttatttactttt 62717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 193
Target Start/End: Original strand, 293003 - 293184
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||| |||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  293003 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggttctaactcaagggattgattaggactatttt-gttaactatcgtggaac 293101  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||||||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||||    
T  293102 tagagaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacttgatctcatctctctct 293184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 198127 - 198319
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| ||||||||||||||  | || || | |||||| ||||||||||||||||| ||||||||||  |||||| |||||  |||||| |||    
T  198127 aagattattagaccacctaaggaattagaggctatagtttgagaagagggtcctaagtcaagggattgattaggactatttt-gttaactatcgtggaac 198225  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| || |||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  198226 tagaaaattattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 198319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 3930 - 3749
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||||||||  |||||| |||||  |||||| |||    
T  3930 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtggaac 3832  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| || ||  ||||  ||||||||||| |  ||||||||||||||    
T  3831 tagaaaatcattcataagaa-taggtgcagtataccaattagggtaacatagatgattcgaaagacctgatctcatctctctct 3749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 5332 - 5524
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||||||||||||||| ||||||||||  |||||| |||||  |||||| |||    
T  5332 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaagtcaagggattgattaggactatttt-gttaactatcgtggaac 5430  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    || | ||  ||||||| ||| |||||||| | ||  ||||| |||||| ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  5431 taaaaaatcattcataagaa-taggtgcactatatcaattaggggaatatagatgattcgaaagacctgatctcatctctcttcatattttctaa 5524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 283
Target Start/End: Complemental strand, 7797 - 7579
Alignment:
Q  67 tcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaat 166  Q
    |||||| ||||||||||  |||||| |||||  |||||| ||||||| ||  ||||||| ||| |||||||| | ||| ||||| |||||  ||||  ||    
T  7797 tcaagggattgattaggactatttt-gttaactatcgtggaactagaaaatcattcataagaa-taggtgcaatataccaattaggggaacatagatgat 7700  T
Q  167 tcgaaagacgtagtctcatctctctc-tatc--ttttctaaacaa-ctttattttctgatatttactttttatgcacaacaaacctaccgcctcgggcac 262  Q
    ||||||||| |  ||||||||||||| |||   ||||| |||| | |||||||||||| |||||||||||||||||| || ||||||| |||||||||||    
T  7699 tcgaaagacctgatctcatctctctcctattctttttcaaaactatctttattttctgttatttactttttatgcac-accaacctactgcctcgggcac 7601  T
Q  263 t-aaataaatttacacatccta 283  Q
    | ||| ||||||| ||||||||    
T  7600 taaaagaaatttatacatccta 7579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 328
Target Start/End: Original strand, 19381 - 19696
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| || ||||| | |||||| || || |||| |||||| |||||||| |  |||||| |||||  |||||| ||||||||    
T  19381 tattagaccacctaaggaattaggggctgtagtttgagaagagagttctaactcaagggattgattatgactatttt-gttaactatcgtggaactagag 19479  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctct--atcttttctaaacaacttt 212  Q
    ||  ||||||| ||| |||||||||| ||| |||||  ||||  ||||  ||||||||||| |  ||||||||||||||   ||||| | |  | |  ||    
T  19480 aatcattcataagaa-taggtgcagtataccaattagaggaacatagatgattcgaaagacctgatctcatctctctctcattctttccaactctatctt 19578  T
Q  213 attttctgatatttactttttatgcacaacaaacctaccgcctcgggc-act-aaataaatttacacatcctatttcataacactattgtttaattgaga 310  Q
    |||||||| ||||||||||||||||| | |||| |||| |||| |||| ||| ||| |||||||| |||||||  |  ||||  || || | ||||||||    
T  19579 attttctgttatttactttttatgcaaaccaaaactactgcctagggcaactaaaagaaatttacgcatcctaaatattaacgttactgctaaattgaga 19678  T
Q  311 ttaacacggtccttgtgg 328  Q
    ||||||| ||||| ||||    
T  19679 ttaacacagtcctcgtgg 19696  T

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Target: scaffold1063 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 2475 - 2659
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    ||||||||||| ||||||||||||||| |||||||| | |||||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  2475 aagaatattagctcacctaaggaattagggactgtagtatgagaagagggtcctaactcaagggattgattaagactatttt-gttaactatcgtggaac 2573  T
Q  110 tagagaaatattcatagga-----agtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctc 190  Q
    |||| ||  ||||||| ||     | |||||||||| ||| ||||| |||||  | ||  | ||||||||| ||||||||||||||    
T  2574 tagaaaatcattcataagaataagaataggtgcagtataccaattaggggaacattgatgactcgaaagacctagtctcatctctc 2659  T

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Target: scaffold0381 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 191
Target Start/End: Complemental strand, 5540 - 5361
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||| | || ||||| | |||||| |||||| ||| |||| | ||||||||||  |||||| |||||  ||||||||||    
T  5540 aagattattagaccacctaaggaatcaggggctgtagtttgagaagagggtcttaactcaaaggattgattaggactatttt-gttaactatcgtgaaac 5442  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctct 191  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||    
T  5441 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 5361  T

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Target: scaffold0334 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 19329 - 19434
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| |||||||||||||||||||||| || ||||| | |||||| |||||||||| |||||| |||||||||   |||||| |||||  |||||| |||    
T  19329 aagattattagatcacctaaggaattaggggctgtagtttgagaagagggtcctaactcaagggattgattagaactatttt-gttaactatcgtggaac 19427  T
Q  110 tagagaa 116  Q
    |||||||    
T  19428 tagagaa 19434  T

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Target: scaffold0080 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 27089 - 27281
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||| | |||||||||||||| || ||||| | |||||| |||||| |||||||| | ||||||||||  |||||| |||||  ||| || |||    
T  27089 aagattattacaccacctaaggaattaggggctgtagtttgagaagagggtcttaagtcaatggattgattaggactatttt-gttaactatcatggaac 27187  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||||||  ||||||| ||| ||| |||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  27188 tagagaatcattcataagaa-tagatgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 27281  T

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Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 377
Target Start/End: Original strand, 223894 - 224059
Alignment:
Q  210 tttattttctgatatttactttttat-gcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    ||||||||||| |||||||||||||| ||||| ||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||    
T  223894 tttattttctgttatttactttttattgcaca-caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttga 223992  T
Q  309 gattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||| |||||  | || || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  223993 gattaacacagtcctcatagatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 224059  T

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Target: scaffold0014; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 377
Target Start/End: Original strand, 228820 - 228985
Alignment:
Q  210 tttattttctgatatttacttttta-tgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    ||||||||||| ||||||||||||| ||||||| |||||||| ||||| | |||| |  ||||||||||||||||  |  ||||  ||||| | | ||||    
T  228820 tttattttctgttatttactttttattgcacaa-aaacctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttga 228918  T
Q  309 gattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||| ||||| ||| | || ||| ||||| |||||||| ||||| ||||| |||||||||||||    
T  228919 gattaacacagtcctcgtgcatacgaac-ttattttattacttcgatag-ttttagtacacttgctaaa 228985  T

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Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 174
Target Start/End: Original strand, 241480 - 241642
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||| | | |||||| |||||||||| |||||| |||||||| |  |||||| |||||  |||||| |||    
T  241480 aagattattagaccacctaaggaattagggcctgcagtttgagaagagggtcctaactcaagggattgattacgactatttt-gttaactatcgtggaac 241578  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaaga 174  Q
    |||||||  |||||||  || |||||||||| ||| ||||| |||||  ||||  ||||||||||    
T  241579 tagagaatcattcata-aaaataggtgcagtataccaattaggggaacatagatgattcgaaaga 241642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2073 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold2073
Description:

Target: scaffold2073; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 338
Target Start/End: Complemental strand, 1004 - 678
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagag 114  Q
    ||||||| |||||||||||||| ||  |||| | ||| || ||||||||||  ||||| ||||||||||  |||||| |||||  |||||| |||||||     
T  1004 tattagaccacctaaggaattaggggttgtagtttgaaaagagggtcctaacccaagggattgattaggactatttt-gttaactatcgtggaactagat 906  T
Q  115 aaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc----tatcttttctaaa--caa 208  Q
    ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  | |||||| ||||    ||||||||| |||   |     
T  905 aatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatatcatctatctctccttatcttttccaaaactac 807  T
Q  209 ctttattttct-gatatttactttttatgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattg 307  Q
    |||||||||||   ||||||  ||||||||| | |||| |||| |||||| ||||||||  |||||||||||||||  |  ||||  ||||| | |||||    
T  806 ctttattttctatttattta-attttatgca-atcaaaactactgcctcgagcactaaaataatttacacatcctagatattaaccttattgctaaattg 709  T
Q  308 agattaacacggtccttgtggaaacaaactt 338  Q
    |||||||||| |||| |||||| || |||||    
T  708 agattaacacagtccctgtggatacgaactt 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1755 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1755
Description:

Target: scaffold1755; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 101 - 293
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||| ||||| |||||| | | |||||| |||||||||| |||||| ||||||||||  ||| || |||||  |||||| |||    
T  101 aagattattagaccacctaagcaattagggactgaagtttgagaagagggtcctaactcaagggattgattaggactatgtt-gttaactatcgtggaac 199  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  ||||||| ||| || ||||||| ||| ||||| |||||  || |  ||||||||||| |  ||||||||||||  || ||||||||    
T  200 tagaaaatcattcataagaa-tatgtgcagtataccaattaggggaacatatatgattcgaaagacctgatctcatctctcttcatattttctaa 293  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 248498 - 248690
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | || ||| ||||||||||||||||| |||||||| |  |||||| |||||   ||||| |||    
T  248498 aagattattagaccacctaaggaattaggggttgtagtttgtgaagagggtcctaagtcaagggattgattatgactatttt-gttaactgtcgtggaac 248596  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctctatcttttctaa 204  Q
    |||| ||  | ||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||| |  ||||||||||||  || ||||||||    
T  248597 tagaaaatcactcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaa 248690  T

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Target: scaffold0996 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 382
Target Start/End: Complemental strand, 1817 - 1687
Alignment:
Q  254 ctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtggaaacaaactt---tattatattact 350  Q
    |||||||||||||  |||||||||||||||  |  ||||  ||||| | ||||||||||||||| ||||||||||| || |||||    ||| |||||||    
T  1817 ctcgggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagtccttgtggatacgaacttataaattttattact 1718  T
Q  351 ttgatagtttttaatacacttgctaaatttct 382  Q
    | ||||| ||||| ||||||||||||| ||||    
T  1717 tcgatag-ttttagtacacttgctaaaattct 1687  T

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Target: scaffold0520 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 8361 - 8288
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagg 83  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| ||||||||||||||||| || |||||||    
T  8361 aagattattagaccacctaaggaattaggggctgtagtttgagaagagggtcctaagtcaagggatcgattagg 8288  T

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Target: scaffold0520; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 1690 - 1552
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| ||  |||| | |||||| | ||||||||||||||| |||||||| |  |||||| |||||  || ||| |||    
T  1690 aagattattagaccacctaaggaattaggggttgtagtttgagaagacggtcctaagtcaagggattgattatgactatttt-gttaactattgtgtaac 1592  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaatta 150  Q
    |||| ||  ||||||| ||| |||||||||| ||| |||||    
T  1591 tagacaatcattcataagaa-taggtgcagtttaccaatta 1552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 174
Target Start/End: Original strand, 165 - 327
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| |||||||||||||| || ||||| | |||||| || ||| ||| |||||| |||||||| |  |||||| |||||  ||||| ||||    
T  165 aagattattagaccacctaaggaattaggggctgtagtttgagaagagagtcttaactcaagggattgattaagactatttt-gttaactatcgtaaaac 263  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaaga 174  Q
    |||| ||  ||||||| ||| |||||||||| ||| ||||| |||||  ||||  ||||||||||    
T  264 tagaaaatcattcataagaa-taggtgcagtataccaattaggggaacatagatgattcgaaaga 327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 205 - 25
Alignment:
Q  10 aagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaac 109  Q
    |||| ||||||| | |||||| ||||| || ||||| | |||||| |||||||||| |||||| ||| ||||||| |||||| |||||  |||||| ||     
T  205 aagattattagaccgcctaagaaattaggggctgtagtttgagaagagggtcctaactcaagggatttattagggctatttt-gttaactatcgtggaat 107  T
Q  110 tagagaaatattcataggaagtaggtgcagtgtacaaattatgggaatttagagaattcgaaagacgtagtctcatctctctc 192  Q
    |||| ||  ||| ||| ||| |||||||||| ||| ||||| |||||  | ||  ||||||||||| |  |||||||||||||    
T  106 tagaaaatcattaatacgaa-taggtgcagtataccaattaagggaacatcgatgattcgaaagacctgatctcatctctctc 25  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0807 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 2218 - 2134
Alignment:
Q  7 tcgaagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttatttt 91  Q
    ||||||| ||||||| |||||||| ||||| || ||||||||  |||| || |||| || |||||| ||||||||||| ||||||    
T  2218 tcgaagattattagaccacctaagaaattacgggctgtaatcctagaagagagtcccaactcaagggattgattagggctatttt 2134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 377
Target Start/End: Original strand, 2659 - 2793
Alignment:
Q  241 acaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattgagattaacacggtccttgtggaaacaaacttta 340  Q
    |||||||||| ||||| |||||| |  ||||||||||||||||  |  ||||  ||||| | | ||||||||||||| ||||||||||| || ||| |||    
T  2659 acaaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtccttgtggatacgaac-tta 2757  T
Q  341 ttatattactttgatagtttttaatacacttgctaaa 377  Q
    || |||||||| |||| |||| | |||||||| ||||    
T  2758 ttttattacttcgata-ttttaagtacacttggtaaa 2793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 377
Target Start/End: Original strand, 20242 - 20407
Alignment:
Q  210 tttattttctgatatttacttttta-tgcacaacaaacctaccgcctcgggcactaaataaatttacacatcctatttcataacactattgtttaattga 308  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| |||||  ||||| |  ||||||||||||||||     ||||  ||||| | | ||||    
T  20242 tttattttctgttatttactttttattgcac-acaaacctactgcctcaagcacttataaaatttacacatcctagaaattaactttattgctaagttga 20340  T
Q  309 gattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||| ||||| ||||| |  ||| ||||| |||||||| | ||| ||||| |||||||||||||    
T  20341 gattaacacagtcctcgtggatatgaac-ttattttattacttcggtag-ttttagtacacttgctaaa 20407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 29386 - 29526
Alignment:
Q  51 agaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtgaaactagagaaatattcataggaagtaggtgcagtgtacaaatta 150  Q
    |||| |||||||||| |||||| ||||||||||  |||||| |||||  ||||| ||||||| ||   ||||| | ||| |||||||||| || ||||||    
T  29386 agaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtaaaactagggactcattcacaagaa-taggtgcagtataaaaatta 29483  T
Q  151 tgggaatttagagaattcgaaagacgtagtctcatctctctct 193  Q
     |||||  ||||  ||||||||||| ||  |||||||||||||    
T  29484 ggggaacatagatgattcgaaagacctaaactcatctctctct 29526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 31079 - 31145
Alignment:
Q  15 tattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgatta 81  Q
    ||||||| |||||||||||||| || |||||| |  |||| |||||||||| |||||| ||||||||    
T  31079 tattagaccacctaaggaattaggggctgtaaccctagaagagggtcctaactcaagggattgatta 31145  T

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Target: scaffold0056 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 67670 - 67562
Alignment:
Q  7 tcgaagaatattagatcacctaaggaattatggactgtaatctgagaaaagggtcctaagtcaaggtattgattagggttattttagttaatcatcgtga 106  Q
    ||||||| ||||||| |||||||||||||| |   |||| | | |||| |||||||||| |||||| ||||||||||  |||||| |||||  ||||||     
T  67670 tcgaagattattagaccacctaaggaattaggagttgtagtttaagaagagggtcctaactcaagggattgattaggactatttt-gttaactatcgtgg 67572  T
Q  107 aactagagaa 116  Q
     |||||||||    
T  67571 tactagagaa 67562  T

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Target: scaffold0737 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 377
Target Start/End: Complemental strand, 7189 - 7118
Alignment:
Q  305 ttgagattaacacggtccttgtggaaacaaactttattatattactttgatagtttttaatacacttgctaaa 377  Q
    ||||||||||||| ||||| ||||| || |||||  || |||||||| ||||| ||||| |||||||||||||    
T  7189 ttgagattaacaccgtcctcgtggatacgaacttatttttattacttcgatag-ttttagtacacttgctaaa 7118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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