View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17246_high_5 (Length: 307)
Name: NF17246_high_5
Description: NF17246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17246_high_5 |
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Alignment Details
Target: chr3 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 10 - 292
Target Start/End: Complemental strand, 31803008 - 31802723
Alignment:
| Q |
10 |
aataaaatcaagattatcatctcacaataaagttcatataacatttaaaactaaacccaatagaagttaatttatcaacttaatagtttccttctatgta |
109 |
Q |
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| T |
31803008 |
aataaaatcaggattatcatctcacaataaagttcatataacatttaaaactaaacccaatagaagttaatttatcaacttaatagtttccttctatgta |
31802909 |
T |
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| Q |
110 |
aatatgagaaattctaaaataaaaggaatagattaactccaagcaattacaccaatcagtcctcaacatccaagaagcaatgttagaagagaaaaataaa |
209 |
Q |
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| T |
31802908 |
aatatgagaaattctaaaataaaaggaatagattaactccaagcaattgcaccaatcagtcctcaacatccaagaagcaatgttagaagagaaaaataaa |
31802809 |
T |
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| Q |
210 |
acgagtaaagaaagaagattcacaatctat---taagagtttaagccaacccttttgataatcaaagacttgaatagcaaacatag |
292 |
Q |
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| T |
31802808 |
atgagtaaagaaagaagattcacaatctattagtaagagtttaagccaacccttttgataatcaaagacttgaatagcaaacatag |
31802723 |
T |
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