View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17248_high_31 (Length: 251)
Name: NF17248_high_31
Description: NF17248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17248_high_31 |
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Alignment Details
Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 45928442 - 45928677
Alignment:
| Q |
1 |
tgcttacaatgtcaatacaaagcttacagtactccaataattatatcagaggagaatgtgaatcaactagatggaactttattagaatacaaatggagga |
100 |
Q |
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| T |
45928442 |
tgcttacaatgtcaatacaaagcttacagtactccaataattatatcagaggagaatgagaatcaactagatggaactttattagaatacaaatggagga |
45928541 |
T |
|
| Q |
101 |
agttacaccataatagaaagaaaaaaccaaatctagtagaaggatactactagcctagccattaattctaagatgatcctcttacacctctctcaccaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45928542 |
agttacaccataatagaaagaaaaaaccaaatctagtagaaggatactactagcctagccattaattctaagatgatcctcttacacctctctcaccaaa |
45928641 |
T |
|
| Q |
201 |
tttacttcggataaggcctagctgtaatatgcaata |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
45928642 |
tttacttcggataaggcctagctgtaatatgcaata |
45928677 |
T |
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