View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17248_high_38 (Length: 239)
Name: NF17248_high_38
Description: NF17248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17248_high_38 |
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Alignment Details
Target: chr6 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 45 - 213
Target Start/End: Complemental strand, 32467796 - 32467628
Alignment:
| Q |
45 |
gattctcaactcctaactaagctttctccatttgcgagacctaagttgtctcttgaacaatcgaaaataatatattcaacattaaagaaaattagcgaac |
144 |
Q |
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| T |
32467796 |
gattctcaactcctaactaagctttctccatttgcgagacctaagttgtctcttgaacaatcgaaaataatatattcaacattaaagaaaattaccgaac |
32467697 |
T |
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| Q |
145 |
atataaattaatgtttataaacggtaaatttagaaagnnnnnnnttacaccaaaagtttgtatctcttt |
213 |
Q |
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|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||| |
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| T |
32467696 |
atataaattaatgtttataaccggtaaatttagaaagaaaaaaattacaccaaaagtttgtatttcttt |
32467628 |
T |
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