View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17248_high_47 (Length: 219)

Name: NF17248_high_47
Description: NF17248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17248_high_47
NF17248_high_47
[»] chr1 (57 HSPs)
chr1 (46-128)||(30530286-30530368)
chr1 (46-128)||(41558095-41558177)
chr1 (46-126)||(34002209-34002289)
chr1 (46-128)||(33669710-33669792)
chr1 (46-130)||(4511662-4511746)
chr1 (46-129)||(52417633-52417716)
chr1 (46-128)||(33422106-33422188)
chr1 (46-128)||(44112556-44112638)
chr1 (50-127)||(8464401-8464478)
chr1 (46-129)||(5315313-5315396)
chr1 (46-127)||(50884658-50884739)
chr1 (46-118)||(40139215-40139287)
chr1 (50-130)||(44641788-44641868)
chr1 (46-130)||(50017308-50017392)
chr1 (46-137)||(8934412-8934503)
chr1 (47-132)||(10426835-10426921)
chr1 (46-128)||(24775077-24775159)
chr1 (46-125)||(52369001-52369080)
chr1 (46-128)||(45470726-45470808)
chr1 (77-126)||(21154356-21154405)
chr1 (46-122)||(15059726-15059802)
chr1 (46-126)||(51250180-51250260)
chr1 (50-125)||(29688876-29688951)
chr1 (46-129)||(49596343-49596426)
chr1 (57-131)||(51193016-51193091)
chr1 (46-128)||(42829195-42829277)
chr1 (46-128)||(49589859-49589941)
chr1 (46-127)||(7423116-7423197)
chr1 (46-126)||(6841893-6841973)
chr1 (46-138)||(48576382-48576474)
chr1 (82-129)||(39220333-39220380)
chr1 (78-132)||(24611978-24612032)
chr1 (50-126)||(33660151-33660227)
chr1 (62-123)||(52078539-52078600)
chr1 (46-126)||(4154684-4154764)
chr1 (46-98)||(19920864-19920916)
chr1 (78-129)||(34395805-34395857)
chr1 (46-129)||(1724120-1724203)
chr1 (46-121)||(5975639-5975714)
chr1 (96-127)||(9362917-9362948)
chr1 (77-120)||(44519173-44519216)
chr1 (46-123)||(7078391-7078469)
chr1 (81-126)||(26547371-26547417)
chr1 (46-120)||(38233375-38233449)
chr1 (46-127)||(42843231-42843313)
chr1 (46-91)||(5959490-5959535)
chr1 (46-99)||(26501397-26501450)
chr1 (46-99)||(29489275-29489328)
chr1 (50-131)||(38019387-38019467)
chr1 (46-127)||(44950309-44950390)
chr1 (95-127)||(9335989-9336021)
chr1 (46-122)||(10121863-10121939)
chr1 (90-122)||(11011888-11011920)
chr1 (94-126)||(12039615-12039647)
chr1 (46-98)||(18610872-18610924)
chr1 (78-122)||(44503547-44503591)
chr1 (46-125)||(52669669-52669749)
[»] chr6 (20 HSPs)
chr6 (46-136)||(7693417-7693507)
chr6 (46-127)||(30622126-30622207)
chr6 (50-127)||(19788964-19789041)
chr6 (46-128)||(30795982-30796064)
chr6 (50-126)||(27176063-27176139)
chr6 (46-129)||(2333477-2333560)
chr6 (46-128)||(3800696-3800784)
chr6 (46-129)||(1803971-1804055)
chr6 (46-120)||(9200212-9200286)
chr6 (46-128)||(14569269-14569351)
chr6 (50-127)||(28647323-28647400)
chr6 (46-129)||(23633211-23633294)
chr6 (46-126)||(6158669-6158749)
chr6 (90-130)||(28875239-28875279)
chr6 (46-121)||(26860509-26860584)
chr6 (49-127)||(33491843-33491922)
chr6 (46-131)||(1969728-1969814)
chr6 (46-127)||(3821506-3821587)
chr6 (46-126)||(12441629-12441710)
chr6 (46-98)||(17835714-17835766)
[»] chr7 (25 HSPs)
chr7 (46-127)||(17500799-17500880)
chr7 (46-127)||(17552334-17552415)
chr7 (50-126)||(49089053-49089129)
chr7 (46-127)||(27070557-27070638)
chr7 (46-127)||(27207675-27207756)
chr7 (46-126)||(30391248-30391328)
chr7 (50-130)||(31436523-31436602)
chr7 (46-126)||(47644811-47644891)
chr7 (46-125)||(5724140-5724219)
chr7 (46-139)||(12141986-12142079)
chr7 (46-138)||(37149351-37149444)
chr7 (45-131)||(37385116-37385203)
chr7 (46-120)||(40077357-40077432)
chr7 (46-127)||(10014842-10014924)
chr7 (78-128)||(36186781-36186831)
chr7 (50-127)||(21153158-21153235)
chr7 (58-129)||(8742497-8742569)
chr7 (46-126)||(31009529-31009609)
chr7 (46-129)||(24267533-24267616)
chr7 (46-120)||(26041412-26041487)
chr7 (78-128)||(45981304-45981354)
chr7 (46-95)||(10161850-10161899)
chr7 (47-128)||(23761170-23761251)
chr7 (50-126)||(18067814-18067890)
chr7 (46-98)||(44175647-44175699)
[»] chr3 (51 HSPs)
chr3 (127-214)||(1459128-1459216)
chr3 (46-127)||(622347-622428)
chr3 (46-127)||(2812383-2812464)
chr3 (46-130)||(11233916-11234000)
chr3 (46-126)||(44334690-44334770)
chr3 (46-128)||(4208115-4208197)
chr3 (50-127)||(18713709-18713786)
chr3 (45-118)||(37323768-37323841)
chr3 (49-129)||(42424336-42424416)
chr3 (46-130)||(47509032-47509116)
chr3 (50-129)||(22153970-22154049)
chr3 (46-125)||(26668942-26669021)
chr3 (46-127)||(23906874-23906956)
chr3 (46-128)||(35425559-35425641)
chr3 (46-125)||(12094280-12094359)
chr3 (46-128)||(23920399-23920481)
chr3 (90-127)||(3484891-3484928)
chr3 (46-126)||(12044642-12044723)
chr3 (46-126)||(53932279-53932360)
chr3 (46-126)||(54233389-54233470)
chr3 (46-97)||(1031345-1031396)
chr3 (90-128)||(46574287-46574325)
chr3 (80-122)||(53133841-53133883)
chr3 (46-99)||(28263647-28263700)
chr3 (50-127)||(40159714-40159791)
chr3 (53-126)||(43176304-43176377)
chr3 (46-99)||(50652490-50652543)
chr3 (50-118)||(2009760-2009828)
chr3 (46-126)||(39932245-39932325)
chr3 (50-129)||(43441776-43441856)
chr3 (46-129)||(43460490-43460574)
chr3 (48-127)||(47683894-47683974)
chr3 (90-129)||(24748733-24748772)
chr3 (46-128)||(27937066-27937149)
chr3 (79-129)||(31997937-31997988)
chr3 (90-129)||(38692224-38692263)
chr3 (50-129)||(51032512-51032591)
chr3 (56-134)||(51717553-51717632)
chr3 (45-87)||(3484858-3484900)
chr3 (46-104)||(12762854-12762912)
chr3 (46-88)||(38692253-38692295)
chr3 (78-128)||(42104550-42104600)
chr3 (46-128)||(46473230-46473312)
chr3 (46-111)||(31169464-31169529)
chr3 (46-99)||(34021379-34021432)
chr3 (46-99)||(35756082-35756135)
chr3 (46-87)||(44972835-44972876)
chr3 (45-97)||(11574655-11574707)
chr3 (46-126)||(37585533-37585612)
chr3 (46-129)||(44910806-44910890)
chr3 (50-127)||(55196405-55196486)
[»] scaffold0020 (1 HSPs)
scaffold0020 (46-128)||(156008-156090)
[»] chr5 (31 HSPs)
chr5 (46-126)||(3722965-3723045)
chr5 (50-128)||(18638728-18638806)
chr5 (46-138)||(30301312-30301404)
chr5 (46-127)||(34952293-34952374)
chr5 (46-125)||(39840593-39840672)
chr5 (46-127)||(27340971-27341052)
chr5 (46-127)||(42825216-42825297)
chr5 (47-127)||(20125493-20125573)
chr5 (52-126)||(8725307-8725379)
chr5 (46-129)||(33743219-33743302)
chr5 (50-126)||(3155108-3155184)
chr5 (46-128)||(16292137-16292219)
chr5 (46-120)||(21062884-21062958)
chr5 (46-127)||(31024893-31024974)
chr5 (72-123)||(19867499-19867550)
chr5 (46-128)||(14914472-14914554)
chr5 (46-122)||(2456128-2456204)
chr5 (46-129)||(17489450-17489534)
chr5 (46-132)||(33626521-33626607)
chr5 (46-127)||(4878162-4878243)
chr5 (46-129)||(8959262-8959346)
chr5 (46-130)||(33567124-33567208)
chr5 (50-126)||(36415951-36416027)
chr5 (46-129)||(26626705-26626788)
chr5 (50-125)||(32425058-32425133)
chr5 (50-128)||(39788606-39788685)
chr5 (45-92)||(42807409-42807456)
chr5 (77-123)||(31708465-31708511)
chr5 (90-128)||(32682044-32682082)
chr5 (47-127)||(22203810-22203891)
chr5 (46-110)||(41210418-41210483)
[»] chr4 (45 HSPs)
chr4 (46-127)||(11012227-11012308)
chr4 (46-132)||(42516736-42516822)
chr4 (46-126)||(34114006-34114086)
chr4 (46-127)||(4514153-4514234)
chr4 (46-123)||(10096634-10096711)
chr4 (46-129)||(42882556-42882640)
chr4 (46-128)||(11063976-11064058)
chr4 (50-126)||(45274369-45274445)
chr4 (60-127)||(8906352-8906419)
chr4 (46-128)||(18568701-18568784)
chr4 (46-126)||(40335879-40335956)
chr4 (55-127)||(31804218-31804291)
chr4 (46-128)||(1688315-1688397)
chr4 (45-126)||(20056483-20056565)
chr4 (77-127)||(41154161-41154211)
chr4 (46-126)||(2193697-2193778)
chr4 (46-131)||(13267362-13267447)
chr4 (46-123)||(17363332-17363409)
chr4 (46-127)||(35332806-35332887)
chr4 (46-118)||(40308535-40308605)
chr4 (80-127)||(4511948-4511995)
chr4 (46-129)||(22071600-22071683)
chr4 (46-97)||(31147333-31147384)
chr4 (49-127)||(34259931-34260010)
chr4 (46-123)||(25139848-25139926)
chr4 (46-127)||(33483993-33484075)
chr4 (46-126)||(15638232-15638313)
chr4 (46-87)||(19315008-19315049)
chr4 (90-127)||(19315040-19315077)
chr4 (65-129)||(4489685-4489749)
chr4 (46-126)||(5234360-5234440)
chr4 (46-126)||(29525960-29526040)
chr4 (46-86)||(46912728-46912768)
chr4 (46-129)||(44133633-44133716)
chr4 (81-126)||(19720529-19720575)
chr4 (46-127)||(20632535-20632617)
chr4 (46-92)||(29949596-29949642)
chr4 (46-120)||(39067850-39067924)
chr4 (46-99)||(8026680-8026733)
chr4 (46-126)||(32365555-32365636)
chr4 (46-99)||(36728538-36728591)
chr4 (78-127)||(38674005-38674054)
chr4 (78-118)||(27384310-27384350)
chr4 (82-130)||(29406922-29406970)
chr4 (78-126)||(50159068-50159116)
[»] chr8 (32 HSPs)
chr8 (46-126)||(8074614-8074694)
chr8 (46-129)||(27631049-27631132)
chr8 (46-127)||(41304870-41304951)
chr8 (78-129)||(11155768-11155819)
chr8 (46-129)||(29910098-29910181)
chr8 (46-115)||(5642290-5642359)
chr8 (46-115)||(5644231-5644300)
chr8 (54-129)||(34996246-34996321)
chr8 (46-120)||(323975-324049)
chr8 (46-127)||(2768266-2768347)
chr8 (50-126)||(5924916-5924993)
chr8 (47-127)||(7129636-7129716)
chr8 (46-124)||(37562031-37562110)
chr8 (46-128)||(42026474-42026556)
chr8 (46-135)||(154392-154481)
chr8 (50-126)||(5925161-5925238)
chr8 (50-122)||(30129515-30129588)
chr8 (53-129)||(35594653-35594723)
chr8 (46-128)||(2597046-2597129)
chr8 (78-133)||(10653665-10653720)
chr8 (46-128)||(43605555-43605638)
chr8 (50-127)||(10344434-10344512)
chr8 (77-127)||(11789904-11789954)
chr8 (46-129)||(28623008-28623094)
chr8 (50-127)||(11139002-11139080)
chr8 (46-100)||(20994973-20995027)
chr8 (80-134)||(34810520-34810574)
chr8 (65-126)||(9550312-9550373)
chr8 (46-110)||(6005046-6005110)
chr8 (46-130)||(23258134-23258218)
chr8 (50-126)||(40719533-40719609)
chr8 (50-126)||(41005870-41005946)
[»] scaffold0057 (1 HSPs)
scaffold0057 (47-120)||(21469-21542)
[»] chr2 (27 HSPs)
chr2 (46-127)||(546273-546354)
chr2 (46-128)||(7497878-7497960)
chr2 (48-126)||(10389323-10389401)
chr2 (57-126)||(2308213-2308282)
chr2 (46-127)||(42665700-42665781)
chr2 (46-126)||(36909732-36909812)
chr2 (46-126)||(35965684-35965764)
chr2 (47-125)||(6666123-6666201)
chr2 (70-127)||(42554900-42554957)
chr2 (46-126)||(11442774-11442854)
chr2 (91-127)||(34261912-34261948)
chr2 (46-120)||(40496452-40496526)
chr2 (46-122)||(12358415-12358492)
chr2 (46-126)||(10749568-10749648)
chr2 (46-126)||(15226946-15227026)
chr2 (90-126)||(25994235-25994271)
chr2 (46-98)||(33857319-33857371)
chr2 (46-129)||(43791676-43791760)
chr2 (48-87)||(25994205-25994244)
chr2 (81-127)||(31847669-31847716)
chr2 (50-125)||(36795836-36795911)
chr2 (46-127)||(10550346-10550428)
chr2 (46-92)||(29582303-29582349)
chr2 (46-128)||(38912488-38912570)
chr2 (46-126)||(30973879-30973960)
chr2 (46-99)||(44484572-44484625)
chr2 (90-126)||(44411038-44411074)
[»] scaffold0238 (1 HSPs)
scaffold0238 (46-129)||(16493-16576)
[»] scaffold0194 (1 HSPs)
scaffold0194 (46-123)||(29702-29779)
[»] scaffold0154 (1 HSPs)
scaffold0154 (46-123)||(4417-4493)
[»] scaffold0111 (1 HSPs)
scaffold0111 (46-126)||(36757-36837)
[»] scaffold0072 (1 HSPs)
scaffold0072 (46-128)||(14436-14518)
[»] scaffold0024 (2 HSPs)
scaffold0024 (70-129)||(59702-59761)
scaffold0024 (46-92)||(60569-60615)


Alignment Details
Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 30530368 - 30530286
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30530368 attgttttggaccaataagaagagagaaaatgaaagttgtcatcaaagttgtcccaaatggttgtacatatatcactactctt 30530286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 41558095 - 41558177
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||| |||||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||||||||||    
T  41558095 attgtttttgaccaataagaagaaagaaaaggaaagttgtcacaatagttgtcacaaatggttgtacaaatatcactactctt 41558177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 34002289 - 34002209
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    ||||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  34002289 attgttttggaccaataagaagagagaaaatgaaagttgtgatcaaagttgtcccaaatagttgtacatatatcactactc 34002209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 33669792 - 33669710
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||||||||||| |||||| | |||| || ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33669792 attgttttggaccaatgagaagagaaaaaatgagagttgtcatcaaagttgtcccaaatggttgtacatatatcactactctt 33669710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 4511746 - 4511662
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttta 130  Q
    |||||||||||||||| |||||| | |||| ||||||||||||| |||||||| ||||||||||||||||||||| |||||||||    
T  4511746 attgttttggaccaatgagaagagaaaaaatgaaagttgtcatctaagttgtcccaaatggttgtacatatatcattactcttta 4511662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 52417633 - 52417716
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||||||||  ||||| |||||| |||||||||||||||||    
T  52417633 attgttttggaccaataagaagagagaaaatgaaagttatcatcaaagttgttccaaatagttgtatatatatcactactcttt 52417716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 33422188 - 33422106
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||||||||||| |||||| ||||||  |||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  33422188 attgttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaatggttgtcaatatatcactactctt 33422106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 44112556 - 44112638
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||||||||||| |||||| ||||||  |||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  44112556 attgttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaatggttgtcaatatatcactactctt 44112638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 8464478 - 8464401
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||||| |||| |||||| |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  8464478 ttttggaccaataaaaagagagaaaatgaaagttgtcatcaaagttggcccaagtggttgtacatatatcactactct 8464401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 5315313 - 5315396
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    ||||||||| ||||||||||| | |||||| |||||| |||||||||||||||  ||||||||||||||||| |||||||||||    
T  5315313 attgttttgaaccaataagaaaagagaaaatgaaagtcgtcatcaaagttgtctaaaatggttgtacatatagcactactcttt 5315396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 50884739 - 50884658
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||| ||| |||||| || ||| ||||||| |||||||||||||  ||||||||||||||||||||||||||||    
T  50884739 attgttttggactaatgagaagatagcaaatgaaagttttcatcaaagttgtaccaaatggttgtacatatatcactactct 50884658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 40139215 - 40139287
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatat 118  Q
    |||||||||||| ||| |||||| |||||| |||||||||||||||| ||||||||||| |||||||||||||    
T  40139215 attgttttggacaaatgagaagagagaaaatgaaagttgtcatcaaacttgtcacaaatagttgtacatatat 40139287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 44641868 - 44641788
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttta 130  Q
    |||||||||||| |||||| ||||||  |||||||||| ||||||| ||||||||||||||  ||||||||||||||||||    
T  44641868 ttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttatcacaaatggttgtcaatatatcactactcttta 44641788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 50017392 - 50017308
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttta 130  Q
    |||||||||||||||| | |||| |||||  ||||||| ||| |||||||||| ||||||||||||||||||||| |||||||||    
T  50017392 attgttttggaccaatgaaaagagagaaattgaaagttatcaacaaagttgtctcaaatggttgtacatatatcagtactcttta 50017308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 8934503 - 8934412
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctttattaaaat 137  Q
    |||||||| |||||||||||| | |||||| ||||||||||||  || ||||||||||||||||| || |||||||||||||| || |||||    
T  8934503 attgtttttgaccaataagaaaagagaaaaagaaagttgtcatagaaattgtcacaaatggttgttcaaatatcactactcttgatgaaaat 8934412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 10426835 - 10426921
Alignment:
Q  47 ttgttttggaccaataagaa-gaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctttatt 132  Q
    ||||||| ||||||||| || || ||||||| || |||||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  10426835 ttgttttcgaccaataaaaaagagagaaaagtaaggttgtcataaaagttgtcacacatggttgtacaaatatcactactctttatt 10426921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 24775077 - 24775159
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||||||||||| |||||| ||||||  ||| |||||| ||||||||||| ||||||||||  ||||||||||||||||    
T  24775077 attgttttggaccaatgagaagagagaaaataaaaattgtcaacaaagttgtcaaaaatggttgtcaatatatcactactctt 24775159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 52369080 - 52369001
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactact 125  Q
    |||||||||||||||| |||| | || ||| |||||||||||||||||||||   |||| ||||||||||||||||||||    
T  52369080 attgttttggaccaatgagaatagagcaaatgaaagttgtcatcaaagttgtactaaatagttgtacatatatcactact 52369001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 45470808 - 45470726
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    ||||||||||||||||||||||| |||||| ||||||||| ||||||||| |  ||||| |||||| || |||| ||||||||    
T  45470808 attgttttggaccaataagaagagagaaaatgaaagttgtgatcaaagtttttccaaatagttgtaaatttatcgctactctt 45470726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 21154356 - 21154405
Alignment:
Q  77 gaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  21154356 gaaagttgtcatcaaagttgtatcaaatggttgtacatatatcactactc 21154405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 15059726 - 15059802
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcact 122  Q
    |||||||||||| ||| |||||| |||||| |||| ||||||||||| ||||| |||||| |||||||| |||||||    
T  15059726 attgttttggacaaatgagaagagagaaaatgaaaattgtcatcaaaattgtcccaaatgattgtacatgtatcact 15059802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 51250260 - 51250180
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||| || ||||||||||| ||||||  |||||||||||||||||| |  |||||| |||||||||||||| |||||    
T  51250260 attgttttagatcaataagaagagagaaaataaaagttgtcatcaaagttatttcaaatgattgtacatatatcagtactc 51250180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 29688876 - 29688951
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactact 125  Q
    |||||||||||| |||||||  |||| |||||||||||||||| | |||  ||||||||||||||| |||||||||    
T  29688876 ttttggaccaatgagaagaagaaaaatgaaagttgtcatcaaaatcgtcctaaatggttgtacataaatcactact 29688951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 49596343 - 49596426
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||||||||||||||| ||||   || |||  |||||| |||||||||||||  ||||||||||||||||||||| ||||||||    
T  49596343 attgttttggaccaatgagaatggagcaaattaaagttatcatcaaagttgtaccaaatggttgtacatatatcattactcttt 49596426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 51193091 - 51193016
Alignment:
Q  57 ccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactctttat 131  Q
    |||||||||||| ||||||  || |||||||| |||||||||| ||||||| ||||||||||||||||||| ||||    
T  51193091 ccaataagaagagagaaaaacaatgttgtcatgaaagttgtcatcaaatggatgtacatatatcactactcattat 51193016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 42829277 - 42829195
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    ||||||||  ||||||||||||| ||||||| |  ||||||| |||| |||| | ||||||||||||| ||||||||||||||    
T  42829277 attgttttttaccaataagaagagagaaaagaagggttgtcaccaaaattgttataaatggttgtacaaatatcactactctt 42829195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 49589941 - 49589859
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||| | ||||||| |||||| ||||||  |||||||||| |||||||||||||||| ||| |  ||||||||||||||||    
T  49589941 attgttatagaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaatagttatcaatatatcactactctt 49589859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 7423116 - 7423197
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||| |||||||||||| | |||||||||| |||||||  |||||||| | |||| |||||| | |||||||||||||    
T  7423116 attgtttttgaccaataagaaaagagaaaaggaaggttgtcacaaaagttgttaaaaatagttgtataaatatcactactct 7423197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 6841893 - 6841973
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||| ||||||||| |||| |||||| |||||||||||| | |||||||| |||| ||||| || |||||| |||||    
T  6841893 attgtttttgaccaataaaaagagagaaaaagaaagttgtcatgatagttgtcaaaaatagttgttcaaatatcagtactc 6841973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 48576474 - 48576382
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctttattaaaata 138  Q
    |||||||||||||||||  |||| || | | || ||||||||| |||||||||||| || |||||||| |||||||| ||||| |||| ||||    
T  48576474 attgttttggaccaatagaaagagagcacatgatagttgtcataaaagttgtcacacatagttgtacaaatatcacttctcttaattataata 48576382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 39220333 - 39220380
Alignment:
Q  82 ttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||    
T  39220333 ttgtcaacaaagttgtcacaaatggttgtcaatatatcactactcttt 39220380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 24611978 - 24612032
Alignment:
Q  78 aaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctttatt 132  Q
    |||||||||||||||||||| | | ||||||||||| ||||||| ||||||||||    
T  24611978 aaagttgtcatcaaagttgttagatatggttgtacaaatatcacaactctttatt 24612032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 33660151 - 33660227
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactc 126  Q
    |||| |||||||||||||| | ||||  || |||||||| |||||||||| ||||||| |||||||||||||||||||    
T  33660151 tttttgaccaataagaagataaaaaac-aaggttgtcatgaaagttgtcatcaaatggatgtacatatatcactactc 33660227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 52078539 - 52078600
Alignment:
Q  62 aagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcacta 123  Q
    ||||||| |||||| ||||||| |||||||||||||   |||| ||||||||||||||||||    
T  52078539 aagaagagagaaaatgaaagttatcatcaaagttgttcaaaatagttgtacatatatcacta 52078600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 4154684 - 4154764
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    ||||||||||||||||||||||| || |||  |||||| |||| |||||||| | | ||| ||||||| ||||||| ||||    
T  4154684 attgttttggaccaataagaagagagtaaataaaagttatcattaaagttgttagatatgtttgtacaaatatcacaactc 4154764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 19920864 - 19920916
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtc 98  Q
    |||||||| |||||||||||||| ||||||  |||||||||| ||||||||||    
T  19920864 attgtttttgaccaataagaagagagaaaaacaaagttgtcaccaaagttgtc 19920916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 34395857 - 34395805
Alignment:
Q  78 aaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactcttt 129  Q
    |||||||||||||||||||||  ||||||| | ||||||||||||||||||||    
T  34395857 aaagttgtcatcaaagttgtcttcaaatggatatacatatatcactactcttt 34395805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 1724203 - 1724120
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    ||||||||||||||||| ||||| || |||  |||||||  ||||||||||| | | ||||||||||| ||||||  |||||||    
T  1724203 attgttttggaccaataggaagagagtaaataaaagttgcgatcaaagttgttagatatggttgtacaaatatcataactcttt 1724120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 5975639 - 5975714
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcac 121  Q
    |||||||||||||||||  |||| || |||  ||||||||||| |||||||| | | ||||||||||| |||||||    
T  5975639 attgttttggaccaatagaaagagagtaaataaaagttgtcattaaagttgttagatatggttgtacaaatatcac 5975714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 9362948 - 9362917
Alignment:
Q  96 gtcacaaatggttgtacatatatcactactct 127  Q
    ||||||||||||||||||||||||||||||||    
T  9362948 gtcacaaatggttgtacatatatcactactct 9362917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 44519173 - 44519216
Alignment:
Q  77 gaaagttgtcatcaaagttgtcacaaatggttgtacatatatca 120  Q
    |||||||||||| |||||||||| |||||||||| |||||||||    
T  44519173 gaaagttgtcataaaagttgtcaaaaatggttgttcatatatca 44519216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 7078469 - 7078391
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtc-acaaatggttgtacatatatcacta 123  Q
    |||||||| ||||||| |||| | ||| ||  || ||||||||||||||||||  ||||||| ||||||||||||||||    
T  7078469 attgtttttgaccaattagaaaagagagaaacaaggttgtcatcaaagttgtcttcaaatggatgtacatatatcacta 7078391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 26547371 - 26547417
Alignment:
Q  81 gttgtcatcaaagttgtca-caaatggttgtacatatatcactactc 126  Q
    ||||||||||||||||||  ||||||| |||||||||||||||||||    
T  26547371 gttgtcatcaaagttgtcttcaaatggatgtacatatatcactactc 26547417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 38233375 - 38233449
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatca 120  Q
    ||||||||||||||||| ||||| || |||  ||||||||||| ||| |||| | | ||||||||||| ||||||    
T  38233375 attgttttggaccaataggaagagagtaaataaaagttgtcattaaaattgttagatatggttgtacaaatatca 38233449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 42843313 - 42843231
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactct 127  Q
    |||||||| |||||||||||||| ||||||  || ||||||| |||| || ||| ||| ||| |||||| |||||||||||||    
T  42843313 attgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaaattatcatcaattggatgtacaaatatcactactct 42843231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 5959490 - 5959535
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaa 91  Q
    |||||||| |||||||||||||| ||||||  ||||||||||||||    
T  5959490 attgtttttgaccaataagaagagagaaaatcaaagttgtcatcaa 5959535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 26501397 - 26501450
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca 99  Q
    |||||||| |||||||||||||| ||||||  || |||||||| ||||||||||    
T  26501397 attgtttttgaccaataagaagagagaaaaacaaggttgtcattaaagttgtca 26501450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 29489328 - 29489275
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca 99  Q
    |||||||| |||||||||||||||||||||  || |||||||  ||||||||||    
T  29489328 attgtttttgaccaataagaagaaagaaaaacaaggttgtcactaaagttgtca 29489275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 38019467 - 38019387
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctttat 131  Q
    |||| ||||||||| || | |||||| ||| |||||||||||| ||||  ||||||||||| || |||||||| ||||||||    
T  38019467 tttttgaccaataacaaaagagaaaaagaaggttgtcatcaaa-ttgtaccaaatggttgttcaaatatcactgctctttat 38019387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 44950390 - 44950309
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    ||||||||||| ||||| ||||| || |||  ||||||||||| ||| |||| ||| || |||||||| ||||||| |||||    
T  44950390 attgttttggatcaataggaagagagtaaataaaagttgtcattaaaattgttacatatagttgtacaaatatcacaactct 44950309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 127
Target Start/End: Complemental strand, 9336021 - 9335989
Alignment:
Q  95 tgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||||||||||| ||||||||||||    
T  9336021 tgtcacaaatggttgtacatgtatcactactct 9335989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 10121863 - 10121939
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcact 122  Q
    |||||||| || ||||||||||| |||||| |||| || ||||  || ||||||| |||| ||||||| ||||||||    
T  10121863 attgtttttgatcaataagaagagagaaaaagaaaattatcatgcaaattgtcactaatgattgtacaaatatcact 10121939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 11011920 - 11011888
Alignment:
Q  90 aaagttgtcacaaatggttgtacatatatcact 122  Q
    |||||| ||||||||||||||||||||||||||    
T  11011920 aaagttatcacaaatggttgtacatatatcact 11011888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 12039647 - 12039615
Alignment:
Q  94 ttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||||||||||||||| ||||||||||||    
T  12039647 ttgtcacaaatggttgtacaaatatcactactc 12039615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 18610872 - 18610924
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtc 98  Q
    |||||||| ||||||||| |||| || |||||||||||||||  |||||||||    
T  18610872 attgtttttgaccaataaaaagagaggaaaggaaagttgtcacaaaagttgtc 18610924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 44503591 - 44503547
Alignment:
Q  78 aaagttgtcatcaaagttgtcacaaatggttgtacatatatcact 122  Q
    ||||||||||||||||||||  |||||| |||||||||| |||||    
T  44503591 aaagttgtcatcaaagttgtatcaaatgattgtacatatgtcact 44503547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 52669749 - 52669669
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcac-aaatggttgtacatatatcactact 125  Q
    |||||||| |||||||| ||||| ||||| |||| |||| ||  ||| ||||||| ||||||||||||| |||||| ||||    
T  52669749 attgtttttgaccaatatgaagagagaaagggaaggttgacacaaaatttgtcaccaaatggttgtacaaatatcattact 52669669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 6e-30; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 7693417 - 7693507
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctttattaaaa 136  Q
    ||||||||||||||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  7693417 attgttttggaccaataagaagagagaaaataaaaattgtcatcaaagttgtcccaaatggttgtacatatatcactactctttaataaaa 7693507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 30622126 - 30622207
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  30622126 attgttttggaccaataagaagagaaaaaatgaaagttgtcatcaaagttgtcccaaatagttgtacatatatcactactct 30622207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 19789041 - 19788964
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||| |||||| ||||||  | ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19789041 ttttggaccaatgagaagagagaaaatcagagttgtcatcaaagttgtcccaaatggttgtacatatatcactactct 19788964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 30796064 - 30795982
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||| |||||||||||| |||||||  ||||||||||||  ||||||||||||||||| ||||| ||||||||||||||    
T  30796064 attgtttttgaccaataagaaaaaagaaatagaaagttgtcatacaagttgtcacaaatggtagtacaaatatcactactctt 30795982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 27176063 - 27176139
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||||||||||||||||| ||| |||||||||||| |||| ||||||||||  || |||| ||||||||||||    
T  27176063 ttttggaccaataagaagaaagcaaatgaaagttgtcattaaagatgtcacaaattattttacaaatatcactactc 27176139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 2333477 - 2333560
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||||||||||| |||||||||| ||||||  ||| ||||||||||| ||||  |||||| |||||||||||||| ||||||||    
T  2333477 attgttttggactaataagaagagagaaaataaaaattgtcatcaaaattgtttcaaatgattgtacatatatcagtactcttt 2333560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 3800696 - 3800784
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaa------gttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||||||||||| |||||| |||||| ||||||||||| ||||      |||||| |||||||||||||||||||||||| ||||    
T  3800696 attgttttggaccaatgagaagagagaaaatgaaagttgtcaacaaagttgtcgttgtcccaaatggttgtacatatatcactattctt 3800784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 1803971 - 1804055
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactcttt 129  Q
    |||||||| |||||||||||||| ||||||  || ||||||| ||||||||||| ||| ||| |||||| |||||||||||||||    
T  1803971 attgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactcttt 1804055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 9200212 - 9200286
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatca 120  Q
    ||||||||||||||||| ||||| || |||  |||||||||||||||||||| | | ||||||||||| ||||||    
T  9200212 attgttttggaccaataggaagagagtaaataaaagttgtcatcaaagttgttagatatggttgtacaaatatca 9200286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 14569269 - 14569351
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||||||||||| | |||| ||| ||  ||| || ||||||||||| || ||||||||||||| |||||||||||||||    
T  14569269 attgttttggaccaatgaaaagagagataataaaatttatcatcaaagttatctcaaatggttgtacgtatatcactactctt 14569351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 28647400 - 28647323
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||| |||||| |  |||  |||||||||| |||||||||  ||||||| ||||||||||||||||||||    
T  28647400 ttttggaccaatgagaagagaacaaattaaagttgtcaacaaagttgtaccaaatggatgtacatatatcactactct 28647323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 23633294 - 23633211
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||||||||||||||| | || | ||||||  |||||||||| |||| |||||| ||||||||||  ||||||||| |||||||    
T  23633294 attgttttggaccaatgaaaaaagagaaaataaaagttgtcaacaaaattgtcagaaatggttgtcaatatatcaccactcttt 23633211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 6158749 - 6158669
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||||||||||||  |||| || |||  ||||||||||| |||||||| | | ||||||||||| ||||||| ||||    
T  6158749 attgttttggaccaatagaaagagagtaaataaaagttgtcattaaagttgttagatatggttgtacacatatcacaactc 6158669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 28875239 - 28875279
Alignment:
Q  90 aaagttgtcacaaatggttgtacatatatcactactcttta 130  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  28875239 aaagttgtcccaaatggttgtacatatatcattactcttta 28875279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 26860584 - 26860509
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcac 121  Q
    |||||||||||||||||  |||| || |||  ||||||||||| |||||||| | | ||||||||||| |||||||    
T  26860584 attgttttggaccaatagaaagagagtaaataaaagttgtcattaaagttgttagatatggttgtacaaatatcac 26860509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 33491843 - 33491922
Alignment:
Q  49 gttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtc-acaaatggttgtacatatatcactactct 127  Q
    ||||| |||||||||||||| ||| ||  || ||||| ||||||||||||  ||||||| |||||||||||||| |||||    
T  33491843 gtttttgaccaataagaagagagagaaataaggttgtaatcaaagttgtcttcaaatggatgtacatatatcaccactct 33491922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 131
Target Start/End: Original strand, 1969728 - 1969814
Alignment:
Q  46 attgttttggaccaataagaaga-aagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctttat 131  Q
    ||||||||||| |||||| || | || |||| ||||| ||| ||||||||| || ||||||||||||||||||| |  |||||||||    
T  1969728 attgttttggaacaataaaaatagaaaaaaatgaaagatgtaatcaaagttatcccaaatggttgtacatatattatcactctttat 1969814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 3821506 - 3821587
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    ||||||||||| |||| |||||| |  |||  ||| |||||||||||||| |  ||||||  ||||||||||||||||||||    
T  3821506 attgttttggatcaatgagaagagaacaaataaaaattgtcatcaaagttataccaaatgaatgtacatatatcactactct 3821587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 12441629 - 12441710
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactc 126  Q
    ||||||||  ||| ||||||||| ||||||| || ||||||| ||||||||||| ||| | | |||||| ||||||||||||    
T  12441629 attgtttttaaccgataagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattagatgtacaaatatcactactc 12441710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 17835714 - 17835766
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtc 98  Q
    ||||||||  ||||||||||||| ||||||  ||||||||||| |||||||||    
T  17835714 attgtttttaaccaataagaagagagaaaaacaaagttgtcattaaagttgtc 17835766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 2e-29; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 17500799 - 17500880
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  17500799 attgttttggaccaataagaagagagaaaatgaaagttatcatcaaagttgtcccaaatggttgtacatatatcactactct 17500880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 17552415 - 17552334
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  17552415 attgttttggaccaataagaagagagaaaatgaaagttatcatcaaagttgtcccaaatggttgtacatatatcactactct 17552334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 49089129 - 49089053
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||||||| |||||| |||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  49089129 ttttggaccaatgagaagagagaaaatgaaagttgtcatcaaagttgtcagaaattgttgtacatatatcactactc 49089053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 27070638 - 27070557
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||||||| |||||| |||||| || ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  27070638 attgttttggaccaatgagaagagagaaaatgagagttgtcatcaaagttgtcccaaatgattgcacatatatcactactct 27070557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 27207675 - 27207756
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||||||| |||||| |||||| || ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  27207675 attgttttggaccaatgagaagagagaaaatgagagttgtcatcaaagttgtcccaaatgattgcacatatatcactactct 27207756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 30391248 - 30391328
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||||||||||| |||||| || |||  ||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  30391248 attgttttggaccaatgagaagagagtaaataaaagttgtcatcaaagttgtaccaaatgattgtacatatatcactactc 30391328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 31436523 - 31436602
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttta 130  Q
    |||| ||||||| |||||| | |||| |||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  31436523 ttttagaccaatgagaagagataaaatgaaagttgtcatcaaa-ttgtatcaaatggttgtacatatatcactactcttta 31436602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 47644811 - 47644891
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||||||||||| |||||| || ||| ||||||||||||||||||| |  |||||  ||||||||||||||||||||    
T  47644811 attgttttggaccaatgagaagagagcaaatgaaagttgtcatcaaagttataccaaataattgtacatatatcactactc 47644891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 5724140 - 5724219
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactact 125  Q
    |||||||||||||||| | |||| ||||||  |||||||||||| || |||||  |||||||||||||||||||||||||    
T  5724140 attgttttggaccaatgaaaagagagaaaataaaagttgtcatccaatttgtcttaaatggttgtacatatatcactact 5724219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 12141986 - 12142079
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctttattaaaatag 139  Q
    |||||||| ||||||| | |||||||||||  ||||||||||  ||||||||  ||||||||||| || |||||||||||| || | |||||||    
T  12141986 attgtttttgaccaatgaaaagaaagaaaaaaaaagttgtcacaaaagttgtatcaaatggttgttcaaatatcactactcattgtaaaaatag 12142079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 37149444 - 37149351
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtc-acaaatggttgtacatatatcactactctttattaaaata 138  Q
    ||||||||  ||||||||||||||||||||  || |||||||| |||||||||   |||| | |||||||||||||||||||||| | ||||||    
T  37149444 attgttttttaccaataagaagaaagaaaaacaaggttgtcataaaagttgtcttgaaatagatgtacatatatcactactctttgtaaaaata 37149351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 37385203 - 37385116
Alignment:
Q  45 aattgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactctttat 131  Q
    ||||||||| |||||||||||| | |||| |  || ||||||| ||||||||||| ||| ||| |||||| |||||||||||||||||    
T  37385203 aattgtttttgaccaataagaaaagagaagaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactctttat 37385116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 40077357 - 40077432
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttg-tcacaaatggttgtacatatatca 120  Q
    |||||||| ||||||||||||||||||||| | | |||||||| ||||||| | |||||||||||| || ||||||    
T  40077357 attgtttttgaccaataagaagaaagaaaaaggaggttgtcataaaagttgttaacaaatggttgttcaaatatca 40077432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 10014924 - 10014842
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactct 127  Q
    |||||||| ||||||||| |||| ||||||  ||| |||||| ||||||||||| ||| ||| |||||| |||||||||||||    
T  10014924 attgtttttgaccaataaaaagagagaaaaacaaaattgtcaccaaagttgtcatcaattggatgtacaaatatcactactct 10014842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 36186831 - 36186781
Alignment:
Q  78 aaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||||||||||||| |  ||||||||||||||||||||| |||||||    
T  36186831 aaagttgtcatcaaagttataccaaatggttgtacatatatcattactctt 36186781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 21153158 - 21153235
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||| ||||||| | |||| ||||||  ||||||||||| ||||||||  ||||  ||||||||||||||||||||||    
T  21153158 tttttgaccaatcaaaagagagaaaatcaaagttgtcatgaaagttgtaccaaaaagttgtacatatatcactactct 21153235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 8742497 - 8742569
Alignment:
Q  58 caataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactcttt 129  Q
    ||||||||||| ||||||  || ||||||| ||||||||||| ||| ||| |||||| |||||||||||||||    
T  8742497 caataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactcttt 8742569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 31009609 - 31009529
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    ||||||||||||||||| ||||| || |||  ||||||||||  |||||||| | | ||||||||||| ||||||| ||||    
T  31009609 attgttttggaccaataggaagagagtaaataaaagttgtcactaaagttgttagatatggttgtacaaatatcacaactc 31009529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 24267616 - 24267533
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||||||||||||||||  || | || |||  |||||||||||||||||||| | | ||||||||||| ||||||  |||||||    
T  24267616 attgttttggaccaatagaaaaagagtaaataaaagttgtcatcaaagttgttagatatggttgtacaaatatcataactcttt 24267533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 26041412 - 26041487
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatca 120  Q
    |||||||| |||||||||||||| ||||||  ||||||||||  ||||||||||  |||||| |||||| ||||||    
T  26041412 attgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaatggatgtacaaatatca 26041487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 45981354 - 45981304
Alignment:
Q  78 aaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||||||||||||| |||  ||| ||||||||||||||| |||||||    
T  45981354 aaagttgtcatcaaagttatcattaatagttgtacatatatcattactctt 45981304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 10161899 - 10161850
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagtt 95  Q
    |||||||| ||||||||| |||||||||||  |||||||||| |||||||    
T  10161899 attgtttttgaccaataaaaagaaagaaaaacaaagttgtcaacaaagtt 10161850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 23761170 - 23761251
Alignment:
Q  47 ttgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    ||||||||||| |||| ||||| || |||  |||||||| ||||||||||| | | |||||| |||| ||||||| ||||||    
T  23761170 ttgttttggactaataggaagagagtaaataaaagttgttatcaaagttgttagatatggttatacaaatatcacaactctt 23761251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 18067890 - 18067814
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    ||||| ||||||| ||||| || |||  |||||||||||||||||||| | | || |||||||| ||||||| ||||    
T  18067890 ttttgaaccaataggaagagagtaaataaaagttgtcatcaaagttgttagatatagttgtacaaatatcacaactc 18067814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 44175647 - 44175699
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtc 98  Q
    |||||||| ||||||||||||||||||||| |||  ||||||  |||||||||    
T  44175647 attgtttttgaccaataagaagaaagaaaaagaagattgtcactaaagttgtc 44175699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 214
Target Start/End: Complemental strand, 1459216 - 1459128
Alignment:
Q  127 tttattaaaataggaacagatgtgtacacaatagttgtcttcaccaccaactc-aacaccttttatatctatatttatgttcatctcac 214  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| ||||    
T  1459216 tttattaaaataggaacatatgtgtacacaatagttgtcttcaccaccaactcaaacaccttttatatctatagttacgttcatatcac 1459128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 622428 - 622347
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||||||| |||||| ||||||  |||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  622428 attgttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaatggttgtcaatatatcactactct 622347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 2812383 - 2812464
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||||||||||||||||||||| |||| || |||| ||||||||| ||||| ||| ||||||||| ||||||||    
T  2812383 attgttttggaccaataagaagaaagaaaatgaaaattatcattaaagttgtctcaaatagttatacatatattactactct 2812464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 11234000 - 11233916
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttta 130  Q
    ||||||||||| |||| |||||| || |||  ||||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  11234000 attgttttggatcaatgagaagagagtaaataaaagttgtcatcaaagttgtaccaaatggttgtacatatatcagtactcttta 11233916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 44334770 - 44334690
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||||||||||| |||||| ||||||  ||| |||||| ||||||||||||||||||||||  ||||||||||||||    
T  44334770 attgttttggaccaatgagaagagagaaaataaaaattgtcaacaaagttgtcacaaatggttgtcaatatatcactactc 44334690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 4208197 - 4208115
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||| |||| || ||| ||||||||||||| |||||||||||  ||| |||||||| ||||||||||||||||||||||||||    
T  4208197 attgatttgcactaatgagaagaaagaaaatgaaagttgtcaataaaattgtcacagatggttgtacatatatcactactctt 4208115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 18713709 - 18713786
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||| |||||| ||| || |||||||||||| ||| ||||  ||||||||||||||||||||||||||||    
T  18713709 ttttggaccaatgagaagagagagaatgaaagttgtcattaaaattgttccaaatggttgtacatatatcactactct 18713786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 37323768 - 37323841
Alignment:
Q  45 aattgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatat 118  Q
    ||||| |||||||||||||||||  |||||| |||| ||||||||||||||||| ||||| |||||||||||||    
T  37323768 aattggtttggaccaataagaagggagaaaatgaaaattgtcatcaaagttgtcccaaatagttgtacatatat 37323841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 42424336 - 42424416
Alignment:
Q  49 gttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||||||| |||| |||||| |  ||| |||||||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  42424336 gttttggagcaatgagaagagaataaatgaaagttgtcatcaaagttgtaccaaatggatgtacatatatcactactcttt 42424416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 47509116 - 47509032
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttta 130  Q
    ||||||||||||||||||||| | |  |||  ||| ||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  47509116 attgttttggaccaataagaaaagaacaaataaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactacttttta 47509032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 22153970 - 22154049
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||||||||||| | |||| || ||| |||||||||||| ||||||||  |||||||||||||| |||||||||||||||    
T  22153970 ttttggaccaatgaaaagagagcaaatgaaagttgtcattaaagttgtaccaaatggttgtacaaatatcactactcttt 22154049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 26668942 - 26669021
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactact 125  Q
    |||||||||||||||| | ||   |||||| |||||||||||||| |||||||  |||||||||||||||||||||||||    
T  26668942 attgttttggaccaatgaaaaatgagaaaatgaaagttgtcatcatagttgtcctaaatggttgtacatatatcactact 26669021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 23906956 - 23906874
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactct 127  Q
    |||||||| |||||||||||||| ||||||| || ||||||| ||||||||||| ||| ||| |||||| |||||||||||||    
T  23906956 attgtttttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactct 23906874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 35425641 - 35425559
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    ||||||||||| |||| |||||| || ||| ||||||||||||||||| |||  |||||| || |||||||||||||||||||    
T  35425641 attgttttggatcaatgagaagagagcaaatgaaagttgtcatcaaagatgtaccaaatgattatacatatatcactactctt 35425559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 12094359 - 12094280
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactact 125  Q
    |||||||| |||||||||||||| || ||| ||||  ||||||||||||||||| | | ||||||||| |||||||||||    
T  12094359 attgttttagaccaataagaagagagcaaatgaaatgtgtcatcaaagttgtcatagacggttgtacaaatatcactact 12094280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 23920399 - 23920481
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    ||||||||||||||||| ||||| || |||  ||| ||||||| |||||||| ||| ||||||||||| ||||||| ||||||    
T  23920399 attgttttggaccaataggaagagagtaaataaaaattgtcattaaagttgttacatatggttgtacaaatatcacaactctt 23920481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 3484891 - 3484928
Alignment:
Q  90 aaagttgtcacaaatggttgtacatatatcactactct 127  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3484891 aaagttgtcacaaatggttgtacatatatcactactct 3484928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 12044723 - 12044642
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactc 126  Q
    |||||||| || ||||||||||| | ||||| || ||||||||||||||||||| ||| ||| |||||| ||||||||||||    
T  12044723 attgtttttgatcaataagaagagaaaaaagtaaggttgtcatcaaagttgtcatcaattggatgtacaaatatcactactc 12044642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 53932360 - 53932279
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactc 126  Q
    |||||||| ||| |||||||||| ||||||| || ||||||| ||||||||||| ||| ||| |||||| ||||||||||||    
T  53932360 attgtttttgactaataagaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactc 53932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 54233470 - 54233389
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactc 126  Q
    |||||||| |||||||||||||| ||||||  || ||||||| ||||||||||| ||| ||| |||||| ||||||||||||    
T  54233470 attgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactc 54233389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 1031396 - 1031345
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgt 97  Q
    |||||||| |||||||||||||||||||||  ||||||||||| ||||||||    
T  1031396 attgtttttgaccaataagaagaaagaaaaataaagttgtcataaaagttgt 1031345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 46574287 - 46574325
Alignment:
Q  90 aaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  46574287 aaagttgtcacaaatggttgtacaaatatcactactctt 46574325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 53133883 - 53133841
Alignment:
Q  80 agttgtcatcaaagttgtcacaaatggttgtacatatatcact 122  Q
    |||||||||||||||||||||| ||||||||||| ||||||||    
T  53133883 agttgtcatcaaagttgtcacacatggttgtacaaatatcact 53133841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 28263647 - 28263700
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca 99  Q
    |||||||| |||||||||||||||||||||  ||||||||||  ||||||||||    
T  28263647 attgtttttgaccaataagaagaaagaaaaataaagttgtcactaaagttgtca 28263700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 40159791 - 40159714
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||| ||||||| | |||| ||||||  ||||||||||| ||||||||  ||||  ||||||||||||||||||||||    
T  40159791 tttttgaccaatcaaaagagagaaaaccaaagttgtcatgaaagttgtaccaaagagttgtacatatatcactactct 40159714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 43176304 - 43176377
Alignment:
Q  53 tggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||| |||||| |||| || |||  |||||| |||||||||||||  |||||||||||| ||||||||||||||    
T  43176304 tggatcaataaaaagagagcaaataaaagttatcatcaaagttgtatcaaatggttgtatatatatcactactc 43176377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 50652490 - 50652543
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca 99  Q
    |||||||| |||||||||||||| ||||||| ||| ||||||||||| ||||||    
T  50652490 attgtttttgaccaataagaagagagaaaagcaaaattgtcatcaaaattgtca 50652543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 2009760 - 2009828
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatat 118  Q
    |||| |||||||||||||| ||||||| || ||||||| ||||||||||| |||| | |||||| ||||    
T  2009760 tttttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgtcataaattgatgtacaaatat 2009828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 39932245 - 39932325
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    ||||||||| |||||| |||| | ||||||  |||||||||| ||||||||||| ||||| ||||   |||||||||||||    
T  39932245 attgttttgaaccaatgagaaaagagaaaataaaagttgtcaacaaagttgtcaaaaatgattgtcagtatatcactactc 39932325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 43441776 - 43441856
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactcttt 129  Q
    |||| ||||||||| || | ||||||| || |||||| |||||||||||| ||| ||| |||||| |||||||||||||||    
T  43441776 tttttgaccaataaaaaaagagaaaagtaaggttgtcgtcaaagttgtcatcaattggatgtacaaatatcactactcttt 43441856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 43460490 - 43460574
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcac-aaatggttgtacatatatcactactcttt 129  Q
    |||||||| |||||||||||||| |||||| ||| | ||||   ||||||||||| ||| ||||||||| ||||||||| |||||    
T  43460490 attgtttttgaccaataagaagagagaaaatgaaggctgtcccaaaagttgtcacaaaaaggttgtacaaatatcactattcttt 43460574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 47683894 - 47683974
Alignment:
Q  48 tgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcac-aaatggttgtacatatatcactactct 127  Q
    |||||| |||||||||||||| |||||  ||| ||||||   ||||||||||| ||||||||||||| |||||| ||||||    
T  47683894 tgtttttgaccaataagaagagagaaagagaaggttgtctcaaaagttgtcacaaaatggttgtacaaatatcattactct 47683974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 24748733 - 24748772
Alignment:
Q  90 aaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  24748733 aaagttgtctcaaatagttgtacatatatcactactcttt 24748772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 27937066 - 27937149
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactctt 128  Q
    |||||||| ||||||||| |||| | ||||| || ||||||||||||||||||| ||| | | |||||| |||||| |||||||    
T  27937066 attgtttttgaccaataaaaagataaaaaagcaaggttgtcatcaaagttgtcatcaattagatgtacaaatatcattactctt 27937149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 31997937 - 31997988
Alignment:
Q  79 aagttgtcatcaaa-gttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||||||||||||| |||||| ||||||||||| || |||||||||||||||    
T  31997937 aagttgtcatcaaaagttgtctcaaatggttgttcaaatatcactactcttt 31997988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 38692263 - 38692224
Alignment:
Q  90 aaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  38692263 aaagttgtcataaatggttgtacaaatatcactactcttt 38692224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 51032591 - 51032512
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||| ||||||| | |||| ||||||  ||||||||||| ||||||||   |||  ||||||||||||||||||||||||    
T  51032591 tttttgaccaatcaaaagatagaaaattaaagttgtcatgaaagttgtataaaaaagttgtacatatatcactactcttt 51032512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 51717553 - 51717632
Alignment:
Q  56 accaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactctttattaa 134  Q
    ||||| ||||||| ||||||| || ||||||| ||||||||||| ||| ||| |||||| ||||||||||| ||| ||||    
T  51717553 accaacaagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactacttttttttaa 51717632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 3484858 - 3484900
Alignment:
Q  45 aattgttttggaccaataagaagaaagaaaaggaaagttgtca 87  Q
    ||||||||||||||||| |||||| |||||| |||||||||||    
T  3484858 aattgttttggaccaatgagaagagagaaaatgaaagttgtca 3484900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 12762912 - 12762854
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaat 104  Q
    ||||||||  |||||||| |||| |||||| |||||||||||| ||| |||||||||||    
T  12762912 attgttttttaccaataaaaagagagaaaaagaaagttgtcataaaaattgtcacaaat 12762854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 38692295 - 38692253
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcat 88  Q
    |||||||| |||||||||||||| |||||| ||||||||||||    
T  38692295 attgtttttgaccaataagaagatagaaaaagaaagttgtcat 38692253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 42104550 - 42104600
Alignment:
Q  78 aaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    ||||||||||| |||||||| ||| ||||||||||| ||||||| ||||||    
T  42104550 aaagttgtcattaaagttgttacatatggttgtacaaatatcacaactctt 42104600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 46473230 - 46473312
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||| ||||||| | |||| ||||||   |||||||||| ||||||||  ||||||||||| || |||||| |||||||    
T  46473230 attgtttttgaccaatgaaaagagagaaaaaagaagttgtcataaaagttgtatcaaatggttgttcaaatatcattactctt 46473312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 31169529 - 31169464
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgta 111  Q
    ||||||||||  |||| |||| | |||||| |||||||||||||||| |||||||| || ||||||    
T  31169529 attgttttgggtcaatgagaatagagaaaatgaaagttgtcatcaaaattgtcacatatagttgta 31169464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 34021432 - 34021379
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca 99  Q
    |||||||| |||||||||||||| ||||||  ||||||||||  ||||||||||    
T  34021432 attgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtca 34021379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 35756082 - 35756135
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca 99  Q
    ||||||||  ||||||||||||| ||||||  |||||||||| |||||||||||    
T  35756082 attgtttttaaccaataagaagagagaaaaacaaagttgtcaccaaagttgtca 35756135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 44972835 - 44972876
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtca 87  Q
    ||||||||||||||||||||| | |||||| |||||||||||    
T  44972835 attgttttggaccaataagaaaagagaaaatgaaagttgtca 44972876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 11574655 - 11574707
Alignment:
Q  45 aattgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgt 97  Q
    ||||||||| |||||||||||||| ||||||  || ||||||| |||||||||    
T  11574655 aattgtttttgaccaataagaagagagaaaattaaggttgtcaccaaagttgt 11574707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 37585533 - 37585612
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||| |||||||||||||| |||||||| | |||||||  |||||| ||| |||| ||||| || |||||| |||||    
T  37585533 attgtttttgaccaataagaagagagaaaaggtaggttgtcacaaaagttatcaaaaat-gttgttcaaatatcattactc 37585612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 44910806 - 44910890
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcac-aaatggttgtacatatatcactactcttt 129  Q
    |||||||| |||||||||||||| |||||| | |||||||||  ||| ||||||| ||| | |||| || |||||| ||||||||    
T  44910806 attgtttttgaccaataagaagagagaaaatgtaagttgtcacaaaaattgtcactaaaagattgttcaaatatcattactcttt 44910890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 55196486 - 55196405
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatg----gttgtacatatatcactactct 127  Q
    |||||||| ||||| |||| |||||| ||||||| ||||||||||| || || |||    |||||||||||||||| |||||    
T  55196486 ttttggactaataaaaagagagaaaatgaaagttatcatcaaagttatcccatatggacagttgtacatatatcacaactct 55196405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 156008 - 156090
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||||||||||| |||||| |||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  156008 attgttttggaccaatgagaagagagaaaatgagagttgtcatcaaagttgtcccaaatggttgtacatatatcactactctt 156090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 2e-26; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 3723045 - 3722965
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  3723045 attgttttggaccaataaaaagagagaaaatgaaagttgtcatcaaagttgtcccaaatggttgtacatatatcattactc 3722965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 18638806 - 18638728
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    ||||||||||||||||| | ||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18638806 ttttggaccaataagaaaagagaaaataaaagttgtcatcaaagttgtcccaaatggttgtacatatatcactactctt 18638728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 30301312 - 30301404
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctttattaaaata 138  Q
    |||||||||||| ||| |||||| || ||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||| || ||||||    
T  30301312 attgttttggacaaatgagaagagaggaaatgaaagttgtcatcaaagttgttacatatggttgtacatatatcactactcttaatcaaaata 30301404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 34952374 - 34952293
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||| || |||||  |||||||||||||||||||||    
T  34952374 attgttttggaccaataagaagagagaaaataaaagttgtcatcaaagttatcccaaataattgtacatatatcactactct 34952293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 39840672 - 39840593
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactact 125  Q
    |||||||||||||||| ||||||  |||||  |||||||||||||||||| |||||||| ||||||||||||||||||||    
T  39840672 attgttttggaccaatgagaagagggaaaataaaagttgtcatcaaagttatcacaaatagttgtacatatatcactact 39840593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 27340971 - 27341052
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||||||||| |||| || ||| |||||||||||||||| ||||  |||||| |||||||||||||||||||||    
T  27340971 attgttttggaccaataaaaagagagcaaatgaaagttgtcatcaaaattgtaccaaatgattgtacatatatcactactct 27341052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 42825216 - 42825297
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||||||| |||||| ||||||  |||||||||| |||| |||||||||||||||||  |||||||||||||||    
T  42825216 attgttttggaccaatgagaagagagaaaataaaagttgtcaacaaaattgtcacaaatggttgtcaatatatcactactct 42825297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 20125493 - 20125573
Alignment:
Q  47 ttgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    ||||||| ||||||| |||||| |||||| |||||||||||||||||||||| ||||| |||||| ||||||||| |||||    
T  20125493 ttgtttttgaccaatgagaagagagaaaatgaaagttgtcatcaaagttgtcccaaatagttgtatatatatcaccactct 20125573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 8725379 - 8725307
Alignment:
Q  52 ttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  8725379 ttggaccaataagaaaagagaaaatgaaagttgtcatcaaagttgtcccaaatggttgt--atatatcactactc 8725307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 33743302 - 33743219
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    ||||||||||| |||| |||||| || |||  ||||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  33743302 attgttttggatcaatgagaagagagcaaataaaagttgtcatcaaagttgtaccaaatgattgtacatatatcactactcttt 33743219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 3155108 - 3155184
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    ||||||||||||||||| | |||||| |||||||||||| |||||||||| | ||| ||||||| ||||||||||||    
T  3155108 ttttggaccaataagaatagagaaaatgaaagttgtcattaaagttgtcatatatgattgtacaaatatcactactc 3155184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 16292219 - 16292137
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||| ||||||||| |||  ||||||  | ||||||| ||||||||||||  |||||||||||||||||||||||||||    
T  16292219 attgtttttgaccaataaaaagcgagaaaataatagttgtcttcaaagttgtcatcaatggttgtacatatatcactactctt 16292137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 21062884 - 21062958
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatca 120  Q
    |||||||||| |||||||||| | || ||| |||||||||||||||| ||||  |||||||||||||||||||||    
T  21062884 attgttttgggccaataagaaaagagcaaatgaaagttgtcatcaaaattgtaccaaatggttgtacatatatca 21062958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 31024974 - 31024893
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    ||||||||| |||||| |||||| | |||| |||||||||| |||||||| |||| ||| | ||||||||||||||||||||    
T  31024974 attgttttgaaccaatgagaagagaaaaaatgaaagttgtcgtcaaagttatcaccaattgatgtacatatatcactactct 31024893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 19867550 - 19867499
Alignment:
Q  72 aaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcacta 123  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  19867550 aaaatgaaagttgtcatcaaagttgtcaccaatggatgtacatatatcacta 19867499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 14914472 - 14914554
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||| |||||||||||||| | ||||  |||||||||||||||||| |   |||||| |||||| ||||||||||||||    
T  14914472 attgtttttgaccaataagaagagataaaaacaaagttgtcatcaaagttatatgaaatggatgtacaaatatcactactctt 14914554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 2456128 - 2456204
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcact 122  Q
    |||||||||||||||||  ||||||| ||  || ||||||||||||| |||||||| ||||||||||| ||| ||||    
T  2456128 attgttttggaccaatagaaagaaagcaactgatagttgtcatcaaaattgtcacacatggttgtacaaatagcact 2456204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 17489450 - 17489534
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactcttt 129  Q
    |||||||| |||||||||||||| ||||||  ||  |||||| ||||||||||| ||| ||| |||||| |||||||||||||||    
T  17489450 attgtttttgaccaataagaagagagaaaaacaagattgtcaccaaagttgtcatcaattggatgtacaaatatcactactcttt 17489534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 33626607 - 33626521
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctttatt 132  Q
    |||||||| ||| |||| ||||| || |||  ||||||||||| |||||||| | | ||||||||||| ||||||| ||||||||||    
T  33626607 attgttttagactaataggaagagagtaaataaaagttgtcattaaagttgttagatatggttgtacaaatatcacaactctttatt 33626521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 4878243 - 4878162
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||||||||  || | || |||  |||||||||||||||||||| | | ||||||||||| ||||||| |||||    
T  4878243 attgttttggaccaatagaaatagagtaaataaaagttgtcatcaaagttgttagatatggttgtacaaatatcacaactct 4878162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 8959262 - 8959346
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactcttt 129  Q
    |||||||| ||||||||| |||| ||||||  || ||||||  ||||||||||| ||| ||| |||||| |||||||||||||||    
T  8959262 attgtttttgaccaataaaaagagagaaaaacaaggttgtcgccaaagttgtcatcaattggatgtacaaatatcactactcttt 8959346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 33567208 - 33567124
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttta 130  Q
    |||||||| ||||||| | |||| ||||||   || ||||||  ||||||||  ||||||||||| |||||||||||||||||||    
T  33567208 attgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcatatatcactactcttta 33567124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 36416027 - 36415951
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||| ||||||| | |||| ||||||  ||||||||||| ||||||||  ||||  |||||||||||||||||||||    
T  36416027 tttttgaccaatcaaaagagagaaaaccaaagttgtcatgaaagttgtaccaaagagttgtacatatatcactactc 36415951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 26626788 - 26626705
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||||||| ||||||||| || | ||||||  || |||||||| |||||||| |||||||||||| || |||||| | ||||||    
T  26626788 attgtttttgaccaataacaaaagagaaaaaaaaggttgtcatgaaagttgtaacaaatggttgttcaaatatcattgctcttt 26626705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 32425058 - 32425133
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactact 125  Q
    |||| ||||||| | |||| ||||||  ||||||||||| ||||||||  ||||| ||||||||||| ||||||||    
T  32425058 tttttgaccaatcaaaagatagaaaattaaagttgtcatgaaagttgtaccaaatagttgtacatatgtcactact 32425133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 39788685 - 39788606
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactctt 128  Q
    |||| ||| |||||||||| ||||||| ||  |||||| ||||||| ||| ||| |||||||||| ||||||||||||||    
T  39788685 tttttgacgaataagaagagagaaaagcaagattgtcaccaaagttatcatcaattggttgtacaaatatcactactctt 39788606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 42807409 - 42807456
Alignment:
Q  45 aattgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaa 92  Q
    ||||||||||||||||||| |||| ||||||  |||||||||||||||    
T  42807409 aattgttttggaccaataaaaagagagaaaataaaagttgtcatcaaa 42807456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 31708465 - 31708511
Alignment:
Q  77 gaaagttgtcatcaaagttgtcacaaatggttgtacatatatcacta 123  Q
    ||||||||| ||||||| ||| ||||||||||||||| |||||||||    
T  31708465 gaaagttgtaatcaaagatgttacaaatggttgtacaaatatcacta 31708511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 128
Target Start/End: Complemental strand, 32682082 - 32682044
Alignment:
Q  90 aaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  32682082 aaagttgtcacaaatagttatacatatatcactactctt 32682044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 22203810 - 22203891
Alignment:
Q  47 ttgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactct 127  Q
    ||||||| |||||||||||||| |||||||||| |||||||  ||| ||  || |||||||||||||| |||| | ||||||    
T  22203810 ttgtttttgaccaataagaagagagaaaaggaaggttgtcacaaaaattaccatcaaatggttgtacaaatattattactct 22203891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 110
Target Start/End: Complemental strand, 41210483 - 41210418
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgt 110  Q
    |||||||| |||||||||||||| |||||| | | |||||||| |||||||| | |||||||||||    
T  41210483 attgtttttgaccaataagaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttgt 41210418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 1e-24; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 11012227 - 11012308
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    ||||||| ||||||||||||| | |||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  11012227 attgtttcggaccaataagaaaagagaaaatgaaagttgtcatcaaagttgtcacatatgattgtacatatatcactactct 11012308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 42516736 - 42516822
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctttatt 132  Q
    ||||| |||||||||| |||||| | |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||    
T  42516736 attgtcttggaccaatgagaagagaaaaaatgaaagttgtcatcaaaattgtcacaaatggttgtacatatatcactgctcattatt 42516822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 34114086 - 34114006
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    ||||||||||||||||||||||| |||||| |||||||  ||||||||||||  |||||| ||||||||||||||||||||    
T  34114086 attgttttggaccaataagaagagagaaaatgaaagttaccatcaaagttgttccaaatgattgtacatatatcactactc 34114006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 4514234 - 4514153
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||||||| |||||| |||||| |||| ||||||||||||||||||  ||| |||||||||||||||| |||||    
T  4514234 attgttttggaccaatgagaagagagaaaatgaaaattgtcatcaaagttgtcatgaatagttgtacatatatcaccactct 4514153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 10096711 - 10096634
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcacta 123  Q
    |||||||||||||||| |||||| || ||| |||||||||||||||||||||  ||||||| ||||||||||||||||    
T  10096711 attgttttggaccaatgagaagagagcaaatgaaagttgtcatcaaagttgtaccaaatggctgtacatatatcacta 10096634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 42882556 - 42882640
Alignment:
Q  46 attgttttggaccaataagaa-gaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||||||||||| ||| |||| || | |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  42882556 attgttttggactaatgagaaagagaaaaaatgaaaattgtcatcaaagttgtcacacatggttgtacatatatcactactcttt 42882640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 11064058 - 11063976
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||| |||| |||| ||||||||||| ||||||||||| ||||||||||  |||||||||| || ||||||||||||||    
T  11064058 attgtttttgaccgataaaaagaaagaaaatgaaagttgtcaccaaagttgtcttaaatggttgttcaaatatcactactctt 11063976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 45274369 - 45274445
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||||||| | |||| |||||| || ||||||||||||||||||| ||||| |||||||||||||||| ||||    
T  45274369 ttttggaccaatgaaaagagagaaaatgagagttgtcatcaaagttgtcccaaatagttgtacatatatcaccactc 45274445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 8906419 - 8906352
Alignment:
Q  60 ataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    ||||||||| |||||| |||| ||||||||||| |||||||| |||||||||||||||||| ||||||    
T  8906419 ataagaagagagaaaatgaaaattgtcatcaaaattgtcacatatggttgtacatatatcattactct 8906352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 18568784 - 18568701
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactctt 128  Q
    |||||||| |||||||||||||| ||||||| || ||||||| ||||||||||| ||| ||| |||||| ||||||||||||||    
T  18568784 attgtttttgaccaataagaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactctt 18568701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 40335879 - 40335956
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||| ||||||| || ||| |||||| |||||||||||||||||||||| ||||   ||||||||||||||||||||    
T  40335879 attgttttagaccaatgaggagagagaaaatgaaagttgtcatcaaagttgtctcaaa---ttgtacatatatcactactc 40335956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 31804291 - 31804218
Alignment:
Q  55 gaccaataagaagaaagaaaaggaaagttgtcatcaaagttg-tcacaaatggttgtacatatatcactactct 127  Q
    |||||||| |||||||||||| |||||||||||||||||||| ||||||||| ||||| | ||| |||||||||    
T  31804291 gaccaataggaagaaagaaaatgaaagttgtcatcaaagttgttcacaaatgattgtataaataacactactct 31804218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 1688397 - 1688315
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||| ||||||||||| |||||| ||||||  |||||||| |  ||| |||||||||||||||||  ||||||||||||||||    
T  1688397 attggtttggaccaatgagaagagagaaaataaaagttgtgaataaaattgtcacaaatggttgtcaatatatcactactctt 1688315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 20056483 - 20056565
Alignment:
Q  45 aattgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactc 126  Q
    ||||||||| |||||||||||||| ||||||| ||  |||||| ||||||||||| ||| ||| |||||| ||||||||||||    
T  20056483 aattgtttttgaccaataagaagagagaaaagcaagattgtcaccaaagttgtcatcaattggatgtacaaatatcactactc 20056565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 41154161 - 41154211
Alignment:
Q  77 gaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  41154161 gaaaattgtcatcaaagttgtatcaaatggttgtacatatatcactactct 41154211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 2193778 - 2193697
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactc 126  Q
    |||||||| |||||||||||||| ||||||  ||  |||||||||||||||||| ||| ||| |||||| ||||||||||||    
T  2193778 attgtttttgaccaataagaagagagaaaaacaagattgtcatcaaagttgtcatcaattggatgtacaaatatcactactc 2193697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 13267447 - 13267362
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctttat 131  Q
    |||||||| |||||||||||||| ||||||  |||||| |||||||||||||   |||| | | |||| |||||||||||||||||    
T  13267447 attgtttttgaccaataagaagagagaaaaacaaagttttcatcaaagttgtatgaaatcgatttacaaatatcactactctttat 13267362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 17363332 - 17363409
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcacta 123  Q
    |||||||||||||||| | |||| || ||| |||||||||||||||||||||   |||||||| |||| |||||||||    
T  17363332 attgttttggaccaatgaaaagagagcaaatgaaagttgtcatcaaagttgtataaaatggttttacaaatatcacta 17363409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 35332806 - 35332887
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||| ||||| | | |||| ||||||  | |||| |||||||||||||||| |||||| |||||||||||||||||||    
T  35332806 attgtttttgaccagtgaaaagagagaaaataatagttatcatcaaagttgtcaccaatggtggtacatatatcactactct 35332887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 40308535 - 40308605
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatat 118  Q
    |||||||||||||||||| |||| |||| | |||||||||||||||| |||||||||  | ||||||||||||    
T  40308535 attgttttggaccaataaaaagagagaacatgaaagttgtcatcaaaattgtcacaa--gattgtacatatat 40308605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 127
Target Start/End: Original strand, 4511948 - 4511995
Alignment:
Q  80 agttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  4511948 agttgtcatctaagttgtcaccaatggttgtacatatattactactct 4511995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 22071600 - 22071683
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    ||||||||  ||||||||||||| |||||| |||||||||||   |||||||  |||||||||||||  |||||||| ||||||    
T  22071600 attgtttttaaccaataagaagagagaaaaagaaagttgtcaaacaagttgtaccaaatggttgtactaatatcactcctcttt 22071683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 31147333 - 31147384
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgt 97  Q
    ||||||||||||||||||||||| ||||||  |||||||||||| |||||||    
T  31147333 attgttttggaccaataagaagagagaaaataaaagttgtcatcgaagttgt 31147384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 34259931 - 34260010
Alignment:
Q  49 gttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactct 127  Q
    ||||| |||||||||||||| |||||| |||  ||||||  |||||||||| |||||||||||||| |||||| ||||||    
T  34259931 gtttttgaccaataagaagagagaaaaagaagtttgtcacaaaagttgtcaccaaatggttgtacaaatatcattactct 34260010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 25139926 - 25139848
Alignment:
Q  46 attgttttggaccaataagaagaa-agaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcacta 123  Q
    |||||||| ||||||||| || || ||||||  |||||| | |||||||||||| ||||||||||| ||||||||||||    
T  25139926 attgttttagaccaataaaaaaaagagaaaataaaagttatgatcaaagttgtcccaaatggttgttcatatatcacta 25139848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 33484075 - 33483993
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactct 127  Q
    |||||||| || ||||||||||| ||||||| || ||||||| ||||||||||| ||| ||| |||||| |||||| ||||||    
T  33484075 attgtttttgatcaataagaagagagaaaagtaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcattactct 33483993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 15638232 - 15638313
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactc 126  Q
    |||||||| | |||||||||||| ||||||  || ||||||| ||||||||||| ||| ||| |||||| ||||||||||||    
T  15638232 attgtttttgtccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactc 15638313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 19315008 - 19315049
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtca 87  Q
    |||||||| ||||||||||||||||||||| |||||||||||    
T  19315008 attgtttttgaccaataagaagaaagaaaaagaaagttgtca 19315049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 19315040 - 19315077
Alignment:
Q  90 aaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||||||||||||||| |||||||||||||    
T  19315040 aaagttgtcacaaatggttgtacaaatatcactactct 19315077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 4489749 - 4489685
Alignment:
Q  65 aagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||| ||||||  ||||||||||| ||||||||  ||||  ||||||||||||||||||||||||    
T  4489749 aagatagaaaattaaagttgtcatgaaagttgtaccaaagagttgtacatatatcactactcttt 4489685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 5234440 - 5234360
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||| ||||||||| |||| ||||||  ||| ||||||  ||||||||  ||||||||||| || ||||||||||||    
T  5234440 attgtttttgaccaataaaaagagagaaaaaaaaaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactc 5234360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 29525960 - 29526040
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||||||||||| |||||| |  |||  |||||||||| |||| || |  ||||||| |||||||||||||||||||    
T  29525960 attgttttggaccaatgagaagagaacaaattaaagttgtcaacaaaattataccaaatggatgtacatatatcactactc 29526040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 46912768 - 46912728
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtc 86  Q
    ||||||||||||||||||||||| |||||| ||||||||||    
T  46912768 attgttttggaccaataagaagagagaaaatgaaagttgtc 46912728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 44133633 - 44133716
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    ||||||||||||||||| ||||| || |||  |||||| |||| |||||||| | | || |||||||| ||||||| |||||||    
T  44133633 attgttttggaccaataggaagagagtaaataaaagttatcattaaagttgttagatatagttgtacaaatatcacaactcttt 44133716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 19720575 - 19720529
Alignment:
Q  81 gttgtcatcaaagttgtca-caaatggttgtacatatatcactactc 126  Q
    ||||||||||||||||||  ||||||| |||||||||||||||||||    
T  19720575 gttgtcatcaaagttgtcttcaaatggatgtacatatatcactactc 19720529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 20632617 - 20632535
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactct 127  Q
    |||||||| |||||||| ||||| | ||||  |||||||||| |||| |||||| ||| ||| |||||| |||||||||||||    
T  20632617 attgtttttgaccaataggaagagaaaaaaataaagttgtcaccaaaattgtcatcaattggatgtacaaatatcactactct 20632535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 29949642 - 29949596
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaa 92  Q
    ||||||||  ||||||||||||| |||||| ||||||||||||||||    
T  29949642 attgttttttaccaataagaagagagaaaaagaaagttgtcatcaaa 29949596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 39067924 - 39067850
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatca 120  Q
    |||||||||||||||||  |||| || |||  |||||||||||||||||||| | | ||||||| ||| ||||||    
T  39067924 attgttttggaccaatagaaagagagtaaataaaagttgtcatcaaagttgttagatatggttgaacaaatatca 39067850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 8026733 - 8026680
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca 99  Q
    |||||||| |||||||||||||| ||||||  ||||||||||  ||||||||||    
T  8026733 attgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtca 8026680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 32365636 - 32365555
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactc 126  Q
    |||||||| ||||||||| |||| ||||||  || ||| ||||||||||| |||  |||| | |||||||||||||||||||    
T  32365636 attgtttttgaccaataaaaagagagaaaaataatgttatcatcaaagttatcataaaatagatgtacatatatcactactc 32365555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 36728591 - 36728538
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca 99  Q
    ||||||||  ||||||||||||| ||||||  |||||||||| |||||||||||    
T  36728591 attgttttttaccaataagaagagagaaaaacaaagttgtcaccaaagttgtca 36728538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 38674005 - 38674054
Alignment:
Q  78 aaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||| |||| ||| |||| ||| |||||||||||||||||||||||||    
T  38674005 aaagttctcattaaaattgttacatatggttgtacatatatcactactct 38674054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 27384310 - 27384350
Alignment:
Q  78 aaagttgtcatcaaagttgtcacaaatggttgtacatatat 118  Q
    ||||||||||||||| |||||||||||| ||||||| ||||    
T  27384310 aaagttgtcatcaaaattgtcacaaatgattgtacacatat 27384350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 29406970 - 29406922
Alignment:
Q  82 ttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttta 130  Q
    ||||||| ||||||||  ||||  |||||||||||||||||||||||||    
T  29406970 ttgtcatgaaagttgtaccaaagagttgtacatatatcactactcttta 29406922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 50159068 - 50159116
Alignment:
Q  78 aaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    ||||||||||| |||||||| ||| ||||||||||| ||||||| ||||    
T  50159068 aaagttgtcattaaagttgttacatatggttgtacaaatatcacaactc 50159116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 8074694 - 8074614
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    ||||||||| ||||||||||||| |||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  8074694 attgttttgaaccaataagaagagagaaaatgaaagttgtcatcaaagttgtcaaatatgattgtacatatatcactactc 8074614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 27631049 - 27631132
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||||||| ||||||| | |||| ||||||  | ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27631049 attgtttttgaccaatgaaaagagagaaaataatagttgtcatcaaagttgtcaccaatggttgtacatatatcactactcttt 27631132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 41304951 - 41304870
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||||||| |||||| ||||||  |||||||||| |||||||||||||||| |||||  |||||||||||||||    
T  41304951 attgttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaattgttgtcaatatatcactactct 41304870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 11155819 - 11155768
Alignment:
Q  78 aaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11155819 aaagttgtcatcaaagttgtcacaaatggttctacatatatcactactcttt 11155768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 29910181 - 29910098
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    ||||||||| |||||| |||||| ||||||  |||||||||| ||||||||||| ||||||||||  |||||||||||||||||    
T  29910181 attgttttgaaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcaaaaatggttgtcaatatatcactactcttt 29910098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 5642359 - 5642290
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacata 115  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||| || ||||| ||||||||||    
T  5642359 attgttttggaccaataagaagagagaaaataaaagttgtcatcaaagttatctcaaatagttgtacata 5642290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 5644300 - 5644231
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacata 115  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||| || ||||| ||||||||||    
T  5644300 attgttttggaccaataagaagagagaaaataaaagttgtcatcaaagttatctcaaatagttgtacata 5644231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 34996321 - 34996246
Alignment:
Q  54 ggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||||||| | |||| || ||| |||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  34996321 ggaccaatgaaaagagagcaaatgaaagttgtcatcaaagttgtaccaaatagttgtacatatatcactactcttt 34996246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 324049 - 323975
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatca 120  Q
    ||||||||||||||||||||||| || |||  |||||||||||||||||||| | | ||||||||||| ||||||    
T  324049 attgttttggaccaataagaagagagtaaataaaagttgtcatcaaagttgttagatatggttgtacagatatca 323975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 2768266 - 2768347
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||| |||||||||||||||| |||  |||||||||||  | ||||||| ||||||||| |||| |||||||||||||    
T  2768266 attgtttttgaccaataagaagaaacaaagagaaagttgtcacaatagttgtcgcaaatggttctacaaatatcactactct 2768347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 5924916 - 5924993
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactc 126  Q
    |||| |||||||||||||| ||||||  || |||||||| |||||||||| ||||||| |||||||||||||||||||    
T  5924916 tttttgaccaataagaagagagaaaaataaggttgtcatgaaagttgtcatcaaatggatgtacatatatcactactc 5924993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 7129636 - 7129716
Alignment:
Q  47 ttgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    ||||||| |||||||||||||| ||||||  ||||||||||||||||||||   |||||  |||||| |||||||||||||    
T  7129636 ttgtttttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgtatgaaatgaatgtacaaatatcactactct 7129716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 37562110 - 37562031
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactac 124  Q
    |||||||| |||||||||||||| ||||||  || ||||||||||||||||||| ||| ||| |||||| ||||||||||    
T  37562110 attgtttttgaccaataagaagagagaaaaacaaggttgtcatcaaagttgtcatcaattggatgtacaaatatcactac 37562031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 42026474 - 42026556
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||| ||||||||| |||| ||||||  | ||||||||||||| ||||||| |||| || ||||||||| |||||||||    
T  42026474 attgtttttgaccaataaaaagagagaaaataatagttgtcatcaaaattgtcaccaatgattatacatatattactactctt 42026556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 154392 - 154481
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctttattaaa 135  Q
    |||||||| ||||||||| |||| |||||| |||||||||||  | |||||||  || ||||||| || ||||||||||||||| |||||    
T  154392 attgtttttgaccaataaaaagagagaaaatgaaagttgtcacaatagttgtcttaattggttgttcaaatatcactactctttgttaaa 154481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 5925161 - 5925238
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactc 126  Q
    |||| |||||||||||| | ||||||  || |||||||| |||||||||| ||||||| |||||||||||||||||||    
T  5925161 tttttgaccaataagaatagagaaaaataaggttgtcataaaagttgtcatcaaatggatgtacatatatcactactc 5925238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 30129515 - 30129588
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcact 122  Q
    |||| |||||||||||||| ||||||| |||||||||| ||||||||||| ||| ||| |||||| ||||||||    
T  30129515 tttttgaccaataagaagagagaaaagcaaagttgtcaccaaagttgtcatcaattggatgtacaaatatcact 30129588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 35594653 - 35594723
Alignment:
Q  53 tggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    ||||||||||| |||| |||||| ||||||||||||||||||||       ||||||||||||||||||||||||||    
T  35594653 tggaccaataaaaagagagaaaatgaaagttgtcatcaaagttg------gtggttgtacatatatcactactcttt 35594723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 2597129 - 2597046
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactctt 128  Q
    |||||||| |||||||||||||| ||||||  || ||||||| ||||||||||| ||| ||  |||||| ||||||||||||||    
T  2597129 attgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattgaatgtacaaatatcactactctt 2597046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 133
Target Start/End: Complemental strand, 10653720 - 10653665
Alignment:
Q  78 aaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctttatta 133  Q
    |||||||||||||||||||| | | ||||||||||| ||||||| |||||||||||    
T  10653720 aaagttgtcatcaaagttgttagatatggttgtacaaatatcacaactctttatta 10653665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 43605638 - 43605555
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcac-aaatggttgtacatatatcactactctt 128  Q
    |||||||| |||||||||||||| |||||||| | |||||||  ||||||||||| ||| |||||| || |||||| |||||||    
T  43605638 attgtttttgaccaataagaagagagaaaaggtaggttgtcacaaaagttgtcactaaaaggttgttcaaatatcattactctt 43605555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 10344434 - 10344512
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactct 127  Q
    |||| ||||||||| |||||||||||  || |||||||| |||||||| | ||||| | ||||||||||||||||||||    
T  10344434 tttttgaccaataaaaagaaagaaaaacaaggttgtcataaaagttgttatcaaatagatgtacatatatcactactct 10344512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 11789904 - 11789954
Alignment:
Q  77 gaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    ||||||||||||||||| | |||||||| |||||||| |||||||||||||    
T  11789904 gaaagttgtcatcaaagatatcacaaatagttgtacaaatatcactactct 11789954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 28623094 - 28623008
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaa---tggttgtacatatatcactactcttt 129  Q
    |||||||| |||||||||||| | ||||||| || ||||||| |||||||||||  ||   ||| |||||| |||||||||||||||    
T  28623094 attgtttttgaccaataagaaaagagaaaagcaaggttgtcaccaaagttgtcatcaatattggatgtacaaatatcactactcttt 28623008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 11139002 - 11139080
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactct 127  Q
    |||| ||||||||| |||| ||||||  |||||||||| ||||||||||| ||| | | |||||| |||||||||||||    
T  11139002 tttttgaccaataaaaagatagaaaaacaaagttgtcaccaaagttgtcatcaatttgatgtacaaatatcactactct 11139080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 20995027 - 20994973
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcac 100  Q
    |||||||| |||||||||||||| |||||||| | |||||||  |||||||||||    
T  20995027 attgtttttgaccaataagaagagagaaaaggtaggttgtcacaaaagttgtcac 20994973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 34810574 - 34810520
Alignment:
Q  80 agttgtcatcaaagttgtcacaaatggttgtacatatatcactactctttattaa 134  Q
    ||||||||||||| |||||||| ||| ||||||| |||||||| ||||| |||||    
T  34810574 agttgtcatcaaaattgtcacacatgattgtacaaatatcactcctcttaattaa 34810520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 9550373 - 9550312
Alignment:
Q  65 aagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||| ||||||  ||||||||||| ||||||||  ||||  |||||||||||||||||||||    
T  9550373 aagatagaaaattaaagttgtcatgaaagttgtatcaaagagttgtacatatatcactactc 9550312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 6005046 - 6005110
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgt 110  Q
    |||||||| ||||||| | |||| ||||||||||||||||||   |||||||  |||||||||||    
T  6005046 attgtttttgaccaatgaaaagagagaaaaggaaagttgtcaaataagttgtaccaaatggttgt 6005110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 23258134 - 23258218
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttta 130  Q
    |||||||| ||||||| | |||| ||||||   |||||||||  ||| ||||  ||||||||||| || ||||||||||||||||    
T  23258134 attgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgtttcaaatggttgttcaaatatcactactcttta 23258218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 40719609 - 40719533
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||| ||||||| | |||| ||||||  ||||||||||| ||||||||   |||  |||||||||||||||||||||    
T  40719609 tttttgaccaatcaaaagagagaaaaccaaagttgtcataaaagttgtacgaaagagttgtacatatatcactactc 40719533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 41005870 - 41005946
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||||||| |||||| ||||||  |||||| ||||| || || || |||||  |||| |||||||||||||||    
T  41005870 ttttggaccaatgagaagagagaaaataaaagttatcatctaaattatcccaaataattgtgcatatatcactactc 41005946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 21542 - 21469
Alignment:
Q  47 ttgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatca 120  Q
    ||||||||||||||| |||||| |||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  21542 ttgttttggaccaatgagaagagagaaaatgaaagttgttatcaaagttgtcacaaatgattgtacatatatca 21469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 546354 - 546273
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||||||| |||||| ||||||  |||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  546354 attgttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaatggttgtcaatatatcactactct 546273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 7497960 - 7497878
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    ||||||||| |||||| |||||| ||||||  |||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  7497960 attgttttgaaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcacaaatggttgtcaatatatcactactctt 7497878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 10389323 - 10389401
Alignment:
Q  48 tgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||||||||| |||||| |||||  |||||| |||| |||||||||| |||||||||||||||||||||||||||    
T  10389323 tgttttggaccaatgagaagagagaaagtgaaagtcgtcaccaaagttgtcccaaatggttgtacatatatcactactc 10389401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 2308282 - 2308213
Alignment:
Q  57 ccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    ||||| |||||| |||||| ||||||||||||||||||||||| | ||||||||||| ||||||||||||    
T  2308282 ccaatgagaagagagaaaatgaaagttgtcatcaaagttgtcatatatggttgtacaaatatcactactc 2308213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 42665781 - 42665700
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||||||| | || | || ||| |||||||||||||||||||||  |||||||||||||| |||||||||||||    
T  42665781 attgttttggaccaatgaaaaaagagcaaatgaaagttgtcatcaaagttgtaccaaatggttgtacaaatatcactactct 42665700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 36909812 - 36909732
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||| |||||||||||||| ||||||  ||||||||||||||||||||   |||||| |||||| ||||||||||||    
T  36909812 attgtttttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgtatgaaatggatgtacaaatatcactactc 36909732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 35965684 - 35965764
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    ||||||||| |||||| |||| | |||||   |||||| ||||||||||| ||| ||||||||||||||||||||||||||    
T  35965684 attgttttgaaccaatgagaatagagaaagtaaaagttatcatcaaagttctcataaatggttgtacatatatcactactc 35965764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 6666123 - 6666201
Alignment:
Q  47 ttgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactact 125  Q
    ||||||||||||||| |||||| ||||||  |||||||||| |||| |||||||||||| || |  |||||||||||||    
T  6666123 ttgttttggaccaatgagaagagagaaaataaaagttgtcaacaaaattgtcacaaatgattatcaatatatcactact 6666201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 42554900 - 42554957
Alignment:
Q  70 agaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||| ||||||||| |||||||||||  ||||||||||||| ||||||||||||||    
T  42554900 agaaaatgaaagttgttatcaaagttgtaccaaatggttgtacttatatcactactct 42554957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 11442774 - 11442854
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||||||||||| | |||| |  |||  |||||||||| |||||||||  ||||||| |||||||||||||||||||    
T  11442774 attgttttggaccaatgaaaagagaacaaattaaagttgtcaacaaagttgtaccaaatggatgtacatatatcactactc 11442854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 34261948 - 34261912
Alignment:
Q  91 aagttgtcacaaatggttgtacatatatcactactct 127  Q
    |||||||||||||||||||||||||||||||||||||    
T  34261948 aagttgtcacaaatggttgtacatatatcactactct 34261912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 40496452 - 40496526
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatca 120  Q
    ||||||||||||||||| ||||| || |||  |||||||||||||||||| | | | ||||||||||| ||||||    
T  40496452 attgttttggaccaataggaagagagtaaataaaagttgtcatcaaagttattagatatggttgtacaaatatca 40496526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 12358415 - 12358492
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcact 122  Q
    |||||||| ||||||||| |||| ||||||| || ||||||| ||||||||||| ||| ||| |||||| ||||||||    
T  12358415 attgtttttgaccaataaaaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcact 12358492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 10749648 - 10749568
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||| ||||||||  |||| || ||| | |||||||||| | |||||||| |||||||||| || ||||||||||||    
T  10749648 attgtttttgaccaatagaaagagaggaaaaggaagttgtcatgatagttgtcaaaaatggttgttcaaatatcactactc 10749568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 15227026 - 15226946
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||| |||||||||||||||| ||||  |||||| |||| ||||||||   | || | |||||||||||||||||||    
T  15227026 attgtttttgaccaataagaagaaataaaaacaaagttatcatgaaagttgttcaacatagatgtacatatatcactactc 15226946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 25994235 - 25994271
Alignment:
Q  90 aaagttgtcacaaatggttgtacatatatcactactc 126  Q
    ||||||||||||||| |||||||||||||||||||||    
T  25994235 aaagttgtcacaaatagttgtacatatatcactactc 25994271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 33857319 - 33857371
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtc 98  Q
    |||||||| |||||||||||||| ||||||  |||||||||| ||||||||||    
T  33857319 attgtttttgaccaataagaagacagaaaaataaagttgtcaccaaagttgtc 33857371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 43791760 - 43791676
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcac-aaatggttgtacatatatcactactcttt 129  Q
    |||||||| ||||||||| |||| |||||||| | |||||||  ||||||||||| ||| |||||| || |||||| ||||||||    
T  43791760 attgtttttgaccaataaaaagagagaaaaggtaggttgtcacaaaagttgtcactaaaaggttgttcaaatatcattactcttt 43791676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 25994205 - 25994244
Alignment:
Q  48 tgttttggaccaataagaagaaagaaaaggaaagttgtca 87  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  25994205 tgttttggaccaataagaagagagaaaatgaaagttgtca 25994244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 127
Target Start/End: Original strand, 31847669 - 31847716
Alignment:
Q  81 gttgtcatcaaagttgtc-acaaatggttgtacatatatcactactct 127  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  31847669 gttgtcatgaaagttgtctacaaatggatgtacatatatcactactct 31847716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 36795836 - 36795911
Alignment:
Q  50 ttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactact 125  Q
    |||| ||||||||| || | |||||| ||||| | ||||||||||||||  |||| ||||||||||||||| ||||    
T  36795836 tttttgaccaataaaaaaagagaaaatgaaagctatcatcaaagttgtcctaaatagttgtacatatatcattact 36795911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 10550428 - 10550346
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactct 127  Q
    |||||||| ||||||||| || | ||||||  |||||||||| ||||||||||| ||||||| ||| || |||||| ||||||    
T  10550428 attgtttttgaccaataaaaatagagaaaaacaaagttgtcaacaaagttgtcatcaaatggatgtccaaatatcattactct 10550346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 29582349 - 29582303
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaa 92  Q
    ||||||||  ||||||||||||| |||||| ||||||||||||||||    
T  29582349 attgttttttaccaataagaagagagaaaaagaaagttgtcatcaaa 29582303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 38912570 - 38912488
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||| || |||| | ||||||  ||| ||||||| | || ||||||||  ||||||||||||||||||||| |||||||    
T  38912570 attgttttagatcaatgaaaagaaaacaaatgaaagttattattaaagttgtaccaaatggttgtacatatatcattactctt 38912488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 30973960 - 30973879
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca-caaatggttgtacatatatcactactc 126  Q
    |||||||| ||||||||| |||  ||||||  |||||| |||||||| |||||  ||||||| ||| |||||||||||||||    
T  30973960 attgtttttgaccaataaaaagtgagaaaaacaaagttatcatcaaaattgtcttcaaatggatgttcatatatcactactc 30973879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 44484625 - 44484572
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtca 99  Q
    |||||||| |||||||||||||| ||||||  ||||||||||  ||||||||||    
T  44484625 attgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtca 44484572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 44411074 - 44411038
Alignment:
Q  90 aaagttgtcacaaatggttgtacatatatcactactc 126  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  44411074 aaagttgtcccaaatgattgtacatatatcactactc 44411038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 16493 - 16576
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||||| ||||||||| |||| | ||||||  |||||||||| ||||||||||| ||||||||||  |||||||||||||||||    
T  16493 attgttatggaccaatgagaatagagaaaataaaagttgtcaacaaagttgtcataaatggttgtcaatatatcactactcttt 16576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 29779 - 29702
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcacta 123  Q
    |||||||||||||||| | |||| |||||| |||||||||||||||||||||| |||||| || || ||| |||||||    
T  29779 attgttttggaccaatgaaaagagagaaaatgaaagttgtcatcaaagttgtcccaaatgattatatatacatcacta 29702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 4417 - 4493
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcacta 123  Q
    ||||||||| |||||| | |||| ||||||  | ||||||||||||||||||||| ||||||||||||||||||||||    
T  4417 attgttttg-accaatgaaaagagagaaaataatagttgtcatcaaagttgtcaccaatggttgtacatatatcacta 4493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 36837 - 36757
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactc 126  Q
    |||||||||||||||| |||||| ||||||  |||||||||| ||||||||||| ||||| ||||  |||||||| |||||    
T  36837 attgttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgtcaaaaatgattgtcaatatatcaatactc 36757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 14518 - 14436
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactctt 128  Q
    |||||||||||||||| |||||| |  |||  ||| |||||| |||||||||  ||||||| |||||||||||||||||||||    
T  14518 attgttttggaccaatgagaagagaacaaattaaaattgtcaacaaagttgtaccaaatggatgtacatatatcactactctt 14436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 59761 - 59702
Alignment:
Q  70 agaaaaggaaagttgtcatcaaagttgtcacaaatggttgtacatatatcactactcttt 129  Q
    |||||| ||| ||||| || |||||||||||||||  |||||||||||||| ||||||||    
T  59761 agaaaatgaatgttgttattaaagttgtcacaaattattgtacatatatcattactcttt 59702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 60569 - 60615
Alignment:
Q  46 attgttttggaccaataagaagaaagaaaaggaaagttgtcatcaaa 92  Q
    |||||||||||||||| | |||| |||||| ||||||||||||||||    
T  60569 attgttttggaccaatgaaaagagagaaaatgaaagttgtcatcaaa 60615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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