View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17248_low_19 (Length: 372)

Name: NF17248_low_19
Description: NF17248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17248_low_19
NF17248_low_19
[»] chr5 (26 HSPs)
chr5 (13-150)||(8031981-8032118)
chr5 (267-355)||(8032258-8032347)
chr5 (105-150)||(32842231-32842276)
chr5 (159-200)||(8032150-8032191)
chr5 (280-336)||(32842036-32842093)
chr5 (278-334)||(38692849-38692905)
chr5 (277-324)||(38640719-38640766)
chr5 (274-327)||(15799219-15799273)
chr5 (274-334)||(20891607-20891668)
chr5 (281-336)||(1350375-1350430)
chr5 (281-335)||(26095092-26095147)
chr5 (274-324)||(26319111-26319162)
chr5 (274-336)||(27212702-27212765)
chr5 (277-334)||(4064786-4064844)
chr5 (274-327)||(28083451-28083505)
chr5 (108-150)||(32841415-32841457)
chr5 (274-334)||(6156725-6156786)
chr5 (274-334)||(31221405-31221466)
chr5 (274-334)||(38871665-38871726)
chr5 (273-336)||(13908540-13908604)
chr5 (274-324)||(24203760-24203811)
chr5 (274-324)||(37094992-37095042)
chr5 (274-334)||(15957743-15957804)
chr5 (278-334)||(29862610-29862667)
chr5 (274-334)||(38372303-38372364)
chr5 (274-334)||(39524770-39524831)
[»] chr6 (11 HSPs)
chr6 (274-334)||(7412860-7412920)
chr6 (274-336)||(24604426-24604489)
chr6 (274-334)||(2813290-2813351)
chr6 (274-334)||(17264442-17264503)
chr6 (274-329)||(5699590-5699646)
chr6 (273-335)||(9905149-9905212)
chr6 (274-334)||(32035145-32035206)
chr6 (282-334)||(1945596-1945648)
chr6 (148-200)||(9905025-9905077)
chr6 (274-334)||(5638894-5638955)
chr6 (278-336)||(29289690-29289750)
[»] chr1 (20 HSPs)
chr1 (273-336)||(28866695-28866759)
chr1 (273-336)||(34006290-34006354)
chr1 (274-336)||(6223801-6223864)
chr1 (274-334)||(32817677-32817738)
chr1 (108-147)||(34006116-34006155)
chr1 (274-324)||(49786301-49786351)
chr1 (274-324)||(24471390-24471442)
chr1 (107-148)||(34006943-34006984)
chr1 (277-329)||(34162792-34162845)
chr1 (274-334)||(49677515-49677576)
chr1 (273-336)||(26723553-26723612)
chr1 (273-324)||(40908010-40908062)
chr1 (274-324)||(30829542-30829593)
chr1 (274-324)||(43319272-43319323)
chr1 (281-336)||(3561400-3561457)
chr1 (274-328)||(15069913-15069969)
chr1 (274-334)||(33611476-33611537)
chr1 (274-334)||(40650741-40650802)
chr1 (274-334)||(42545999-42546060)
chr1 (274-329)||(41584741-41584797)
[»] chr7 (17 HSPs)
chr7 (274-336)||(6467729-6467792)
chr7 (105-150)||(7114754-7114799)
chr7 (274-334)||(3936140-3936201)
chr7 (274-334)||(8154931-8154992)
chr7 (274-330)||(31985588-31985645)
chr7 (108-148)||(24689777-24689817)
chr7 (278-336)||(6467205-6467264)
chr7 (278-336)||(24690398-24690457)
chr7 (274-334)||(24042254-24042315)
chr7 (278-334)||(28230534-28230591)
chr7 (274-334)||(47202526-47202587)
chr7 (148-195)||(7115477-7115524)
chr7 (274-328)||(19225670-19225725)
chr7 (274-334)||(31643073-31643134)
chr7 (274-334)||(37518361-37518422)
chr7 (274-334)||(42925707-42925768)
chr7 (281-336)||(30861142-30861198)
[»] chr3 (17 HSPs)
chr3 (274-335)||(30721870-30721933)
chr3 (274-336)||(51258434-51258497)
chr3 (274-334)||(47739998-47740059)
chr3 (281-336)||(5127964-5128019)
chr3 (274-324)||(47302051-47302102)
chr3 (274-334)||(49096293-49096354)
chr3 (274-334)||(50716284-50716345)
chr3 (274-334)||(50796502-50796563)
chr3 (281-336)||(29048381-29048437)
chr3 (278-332)||(51816280-51816335)
chr3 (274-334)||(3352132-3352193)
chr3 (274-334)||(3902872-3902933)
chr3 (274-334)||(34821409-34821470)
chr3 (274-334)||(35142106-35142167)
chr3 (274-334)||(43473035-43473096)
chr3 (274-334)||(51540680-51540741)
chr3 (283-334)||(39149850-39149902)
[»] chr4 (22 HSPs)
chr4 (274-336)||(3703314-3703377)
chr4 (273-335)||(8106431-8106494)
chr4 (274-334)||(2506097-2506158)
chr4 (274-334)||(19835560-19835621)
chr4 (274-334)||(25752510-25752571)
chr4 (274-334)||(46440340-46440401)
chr4 (148-195)||(8106306-8106353)
chr4 (290-336)||(41323157-41323203)
chr4 (107-148)||(8106242-8106283)
chr4 (274-334)||(25491461-25491522)
chr4 (274-334)||(40703704-40703765)
chr4 (274-334)||(32441851-32441911)
chr4 (274-310)||(38416605-38416641)
chr4 (107-150)||(8107064-8107107)
chr4 (274-324)||(23523946-23523997)
chr4 (277-334)||(55052685-55052743)
chr4 (274-334)||(17933203-17933264)
chr4 (274-334)||(29822659-29822720)
chr4 (274-334)||(31582488-31582549)
chr4 (274-334)||(38536210-38536271)
chr4 (274-334)||(41413166-41413227)
chr4 (274-357)||(25538991-25539075)
[»] chr2 (20 HSPs)
chr2 (274-334)||(25217852-25217912)
chr2 (273-336)||(41203246-41203310)
chr2 (277-336)||(38066733-38066792)
chr2 (274-334)||(4268299-4268360)
chr2 (276-328)||(15995180-15995233)
chr2 (274-334)||(45153852-45153913)
chr2 (274-336)||(34517133-34517195)
chr2 (274-334)||(33452504-33452565)
chr2 (274-334)||(41854960-41855021)
chr2 (274-334)||(42894409-42894470)
chr2 (106-150)||(38308278-38308322)
chr2 (278-336)||(30763679-30763737)
chr2 (274-334)||(17474860-17474921)
chr2 (274-334)||(32187930-32187991)
chr2 (274-334)||(36875017-36875078)
chr2 (278-311)||(38308879-38308912)
chr2 (274-334)||(39447194-39447255)
chr2 (307-335)||(19110075-19110103)
chr2 (274-310)||(33366959-33366995)
chr2 (148-200)||(38308980-38309032)
[»] scaffold0508 (1 HSPs)
scaffold0508 (274-334)||(3461-3522)
[»] scaffold0027 (1 HSPs)
scaffold0027 (274-334)||(142029-142090)
[»] chr8 (18 HSPs)
chr8 (274-334)||(44106255-44106316)
chr8 (281-336)||(1076595-1076650)
chr8 (278-328)||(36980623-36980673)
chr8 (274-334)||(3094713-3094774)
chr8 (274-334)||(8885519-8885580)
chr8 (274-334)||(31519958-31520019)
chr8 (277-310)||(35676629-35676662)
chr8 (274-334)||(40994824-40994885)
chr8 (148-200)||(17120082-17120134)
chr8 (108-139)||(17119312-17119343)
chr8 (276-334)||(42280957-42281016)
chr8 (274-327)||(9073536-9073590)
chr8 (277-334)||(16310634-16310692)
chr8 (274-324)||(36404232-36404281)
chr8 (277-334)||(37248593-37248651)
chr8 (274-334)||(27928007-27928068)
chr8 (283-334)||(21004430-21004482)
chr8 (108-148)||(35676813-35676853)
[»] scaffold0137 (1 HSPs)
scaffold0137 (274-327)||(9570-9624)


Alignment Details
Target: chr5 (Bit Score: 126; Significance: 7e-65; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 8031981 - 8032118
Alignment:
Q  13 cagatagatcaggaggaggaattgggccaatatgaggcatcaaggaccgcaaatgtgggctgtcctcatcgtgagatcaaaagctaggataatttgagta 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  8031981 cagatagatcaggaggaggaattgggccaatatgatgcatcaaggaccgcaaatgtgggctgtcctcatcgtgagatcaaaagttgggataatttgagta 8032080  T
Q  113 ttacttttcccaccctatgcatgactagcgcgccctgt 150  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8032081 ttacttttcccaccctatgcatgactagcgcgccctgt 8032118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 267 - 355
Target Start/End: Original strand, 8032258 - 8032347
Alignment:
Q  267 ggcacactacatgatttttccggattacataatccgaacacc-cctaaacaccctttttcaagggaaaaactcaaattttaaacatgttt 355  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8032258 ggcacattacatgatttttccggattacataatccgaacacctcctaaacaccctttttcaagggaaaaactcaaattttaaacatgttt 8032347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 32842276 - 32842231
Alignment:
Q  105 tttgagtattacttttcccaccctatgcatgactagcgcgccctgt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  32842276 tttgagtattacttttcccaccctatgcatgactagcgcgccctgt 32842231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 8032150 - 8032191
Alignment:
Q  159 gattttaaaattcggattcagtttttcctttgttatatggtg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8032150 gattttaaaattcggattcagtttttcctttgttatatggtg 8032191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 32842093 - 32842036
Alignment:
Q  280 atttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaaac 336  Q
    |||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32842093 atttttcaagattacataatccgaacaccccataaacaccctttttcaagggaaaaac 32842036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 38692905 - 38692849
Alignment:
Q  278 tgatttttccggattacataatccgaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||||||| ||||    
T  38692905 tgatgtttccggattacataatccggaaacccctaaacaccctttttcaaggtaaaa 38692849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 324
Target Start/End: Original strand, 38640719 - 38640766
Alignment:
Q  277 atgatttttccggattacataatccgaacacccctaaacacccttttt 324  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||    
T  38640719 atgatttattcggattacataatccgaacacccctaaacacccttttt 38640766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 15799219 - 15799273
Alignment:
Q  274 tacatgatttttccggattacataatccgaaca-cccctaaacaccctttttcaa 327  Q
    |||||||| |||||||||||||||||||||| | |||||||||||||||||||||    
T  15799219 tacatgatgtttccggattacataatccgaaaaccccctaaacaccctttttcaa 15799273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 20891607 - 20891668
Alignment:
Q  274 tacatgatttttccggattacataatccgaaca-cccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| |||||| ||||||||||||||| | ||||||||||||||||||||||| ||||    
T  20891607 tacatgatgtttccgaattacataatccgaaaaccccctaaacaccctttttcaaggtaaaa 20891668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 336
Target Start/End: Complemental strand, 1350430 - 1350375
Alignment:
Q  281 tttttccggattacataatccgaacacccctaaacaccctttttcaagggaaaaac 336  Q
    |||||||  |||| |||||||||||||||||||||| | |||||||||||||||||    
T  1350430 tttttccaaattatataatccgaacacccctaaacatcttttttcaagggaaaaac 1350375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 26095092 - 26095147
Alignment:
Q  281 tttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaaa 335  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  26095092 ttttttcggattacataatccgaacaccccataaacactctttttcaaaggaaaaa 26095147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 26319111 - 26319162
Alignment:
Q  274 tacatgatttttccggattacataatccgaaca-cccctaaacacccttttt 324  Q
    |||||||| |||||||||||||||||||||| | ||||||||||||||||||    
T  26319111 tacatgatgtttccggattacataatccgaaaaccccctaaacacccttttt 26319162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 27212702 - 27212765
Alignment:
Q  274 tacatgatttttccggattacataatccgaacac-ccctaaacaccctttttcaagggaaaaac 336  Q
    |||||||||||| |||||||||||| | |||||| |||| |||||||||||| |||||||||||    
T  27212702 tacatgattttttcggattacataaccagaacacaccctgaacaccctttttgaagggaaaaac 27212765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 4064844 - 4064786
Alignment:
Q  277 atgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    ||||| |||||||||||||||||||| | ||||| ||||||||||||||||||| ||||    
T  4064844 atgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 4064786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 28083505 - 28083451
Alignment:
Q  274 tacatgatttttccggattacataatccgaacaccc-ctaaacaccctttttcaa 327  Q
    |||||||| |||||||||||||||||||| | |||| ||||||||||||||||||    
T  28083505 tacatgatatttccggattacataatccggaaaccctctaaacaccctttttcaa 28083451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 32841415 - 32841457
Alignment:
Q  108 gagtattacttttcccaccctatgcatgactagcgcgccctgt 150  Q
    ||||||||||||| |||||||||||||||||||| ||||||||    
T  32841415 gagtattactttttccaccctatgcatgactagctcgccctgt 32841457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 6156725 - 6156786
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||||| |||||||| ||||    
T  6156725 tacatgatgtttccggattacataatccggaaaccccctaaacaccctctttcaaggtaaaa 6156786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 31221466 - 31221405
Alignment:
Q  274 tacatgatttttccggattacataatccgaacaccc-ctaaacaccctttttcaagggaaaa 334  Q
    |||||||| |||| ||||||||||||||| | |||| |||||||||||||||||||| ||||    
T  31221466 tacatgatgtttctggattacataatccggaaaccctctaaacaccctttttcaaggtaaaa 31221405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 38871665 - 38871726
Alignment:
Q  274 tacatgatttttccggattacataatccgaacaccc-ctaaacaccctttttcaagggaaaa 334  Q
    |||||||| |||||||||||||||||||||| |||| ||||||| | |||||||||| ||||    
T  38871665 tacatgatgtttccggattacataatccgaaaaccctctaaacatcttttttcaaggtaaaa 38871726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 13908540 - 13908604
Alignment:
Q  273 ctacatgatttttccggattacataatccgaacacc-cctaaacaccctttttcaagggaaaaac 336  Q
    |||| |||||||| ||||||| |||||  ||||||| ||||||||| ||||||||||||||||||    
T  13908540 ctacttgattttttcggattatataatttgaacacctcctaaacactctttttcaagggaaaaac 13908604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 24203811 - 24203760
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacacccttttt 324  Q
    |||||||| ||||||||||||||||||| |||  ||||||||||||||||||    
T  24203811 tacatgatgtttccggattacataatccggaaaccccctaaacacccttttt 24203760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 37095042 - 37094992
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccctaaacacccttttt 324  Q
    |||||||| ||||||||||||  |||||||| |||| ||||||||||||||    
T  37095042 tacatgatgtttccggattaccaaatccgaaaacccttaaacacccttttt 37094992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 15957743 - 15957804
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||| ||||||| |||  ||||||||||||| ||||||||| ||||    
T  15957743 tacatgatgtttccggattaaataatccggaaaccccctaaacacccattttcaaggtaaaa 15957804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 334
Target Start/End: Original strand, 29862610 - 29862667
Alignment:
Q  278 tgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||| ||||||||||||||||||| |||  |||||||||||| |||||||||| ||||    
T  29862610 tgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaa 29862667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 38372303 - 38372364
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||| || | ||||| |||| |||||||||||||| ||||    
T  38372303 tacatgatgtttccggattacataattcggaaaccccttaaataccctttttcaaggtaaaa 38372364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 39524770 - 39524831
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| ||| ||||||||||||| || | ||||| ||||||||||||||||||| ||||    
T  39524770 tacatgatgttttcggattacataattcggaaaccccctaaacaccctttttcaaggtaaaa 39524831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 6e-19; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 7412860 - 7412920
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  7412860 tacatgatgtttccggattacataatccgaaaacccctaaacaccctttttcaaggtaaaa 7412920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 336
Target Start/End: Complemental strand, 24604489 - 24604426
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaaac 336  Q
    |||||||||| | |||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  24604489 tacatgatttcttcggattacataatccgaacaccccttaaacaccatttttcaagggaaaaac 24604426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 2813351 - 2813290
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  ||||||||||||||||||||||| ||||    
T  2813351 tacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 2813290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 17264442 - 17264503
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  ||||||||||||||||||||||| ||||    
T  17264442 tacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 17264503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 5699590 - 5699646
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagg 329  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||||||||||||||    
T  5699590 tacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaagg 5699646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 335
Target Start/End: Original strand, 9905149 - 9905212
Alignment:
Q  273 ctacatgatttttccggattacataatccgaaca-cccctaaacaccctttttcaagggaaaaa 335  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| || |  |||||||||||||    
T  9905149 ctacgtgatttttccggattacataatccgaacaccccctaaacgccatcattcaagggaaaaa 9905212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 32035145 - 32035206
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||||||||| |||| ||||    
T  32035145 tacatgatgtttccggattacataatccggaaaccccctaaacacccttttttaaggtaaaa 32035206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 334
Target Start/End: Complemental strand, 1945648 - 1945596
Alignment:
Q  282 ttttccggattacataatccgaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||||||| |||||| |||||||||||||| || ||||||||| |||||    
T  1945648 ttttccggattatataatctgaacacccctaaaccccatttttcaagtgaaaa 1945596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 9905025 - 9905077
Alignment:
Q  148 tgtgcaatttggattttaaaattcggattcagtttttcctttgttatatggtg 200  Q
    ||||||||  ||||||||||||  |||||||||||||||||||||||| ||||    
T  9905025 tgtgcaatccggattttaaaatctggattcagtttttcctttgttatagggtg 9905077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 5638894 - 5638955
Alignment:
Q  274 tacatgatttttccggattacataatccgaacac-ccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| |||||||||||||||||  ||| |  |||||||||||||||||||||| ||||    
T  5638894 tacatgatgtttccggattacataatttgaaaaatccctaaacaccctttttcaaggtaaaa 5638955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 29289750 - 29289690
Alignment:
Q  278 tgatttttccggattacataatccgaacacccc-taaacacc-ctttttcaagggaaaaac 336  Q
    |||||||||||||||| |||||| ||||||||| ||||||||  ||||||||| |||||||    
T  29289750 tgatttttccggattatataatctgaacaccccttaaacaccattttttcaagtgaaaaac 29289690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 28866759 - 28866695
Alignment:
Q  273 ctacatgatttttccggattacataatccgaacaccc-ctaaacaccctttttcaagggaaaaac 336  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  28866759 ctacatgatttttccggattacataatctgaacacccgctaaacaccctttttaaagggaaaaac 28866695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 34006290 - 34006354
Alignment:
Q  273 ctacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaaac 336  Q
    |||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  34006290 ctacatgatttttccggattacataatttgaacaccccataaacaccctttttcaagggaaaaac 34006354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 336
Target Start/End: Complemental strand, 6223864 - 6223801
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaaac 336  Q
    ||||||||||||  ||||||||||||||||||||||| |||||| |||||||||||| ||||||    
T  6223864 tacatgatttttttggattacataatccgaacaccccataaacatcctttttcaaggtaaaaac 6223801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 32817738 - 32817677
Alignment:
Q  274 tacatgatttttccggattacataatccgaaca-cccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||| |||||||||||||||| | ||||||||||||||||||||||| ||||    
T  32817738 tacatgatgtttccagattacataatccgaaaaccccctaaacaccctttttcaaggtaaaa 32817677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 147
Target Start/End: Original strand, 34006116 - 34006155
Alignment:
Q  108 gagtattacttttcccaccctatgcatgactagcgcgccc 147  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  34006116 gagtattacttttcccaccctatgcatgactaacgcgccc 34006155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 49786301 - 49786351
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccctaaacacccttttt 324  Q
    |||||||| |||||||||||||||||||| | ||||| |||||||||||||    
T  49786301 tacatgatgtttccggattacataatccggaaacccccaaacacccttttt 49786351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 24471442 - 24471390
Alignment:
Q  274 tacatgatttttccggattacataatccg--aacacccctaaacacccttttt 324  Q
    |||||||| ||||||||||||||||||||  ||| ||||||||||||||||||    
T  24471442 tacatgatgtttccggattacataatccgaaaacccccctaaacacccttttt 24471390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 34006984 - 34006943
Alignment:
Q  107 tgagtattacttttcccaccctatgcatgactagcgcgccct 148  Q
    ||||||||| |||||||||||||||||||||||| |||||||    
T  34006984 tgagtattatttttcccaccctatgcatgactagagcgccct 34006943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 34162845 - 34162792
Alignment:
Q  277 atgatttttccggattacataatccgaacacccc-taaacaccctttttcaagg 329  Q
    ||||| |||||||||||||||||||| | ||||| |||||||||||||||||||    
T  34162845 atgatgtttccggattacataatccggaaaccccctaaacaccctttttcaagg 34162792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 49677515 - 49677576
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  ||||||||||||| ||||||||| ||||    
T  49677515 tacatgatgtttccggattacataatccagaaaccccctaaacaccccttttcaaggtaaaa 49677576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 26723612 - 26723553
Alignment:
Q  273 ctacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaaac 336  Q
    ||||||||||||||||     ||||||||||||||||| |||||||||||||| |||||||||||    
T  26723612 ctacatgatttttccg-----cataatccgaacaccccctaaacacccttttttaagggaaaaac 26723553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 324
Target Start/End: Complemental strand, 40908062 - 40908010
Alignment:
Q  273 ctacatgatttttccggattacataatccgaaca-cccctaaacacccttttt 324  Q
    ||||||||| ||| |||||||||||||||||| | ||||||||||||||||||    
T  40908062 ctacatgatgttttcggattacataatccgaaaaccccctaaacacccttttt 40908010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 30829593 - 30829542
Alignment:
Q  274 tacatgatttttccggattacataatccgaaca-cccctaaacacccttttt 324  Q
    |||||||| ||| |||||||||||||||||| | ||||||||||||||||||    
T  30829593 tacatgatgttttcggattacataatccgaaaaccccctaaacacccttttt 30829542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 43319323 - 43319272
Alignment:
Q  274 tacatgatttttccggattacataatccgaaca-cccctaaacacccttttt 324  Q
    |||||||||||| |||||||||||||||||| | ||||||||||| ||||||    
T  43319323 tacatgattttttcggattacataatccgaaaaccccctaaacactcttttt 43319272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 336
Target Start/End: Complemental strand, 3561457 - 3561400
Alignment:
Q  281 tttttccggattacataatccgaacaccc--ctaaacaccctttttcaagggaaaaac 336  Q
    ||||| ||||||| | |||| ||||||||  |||||||||||||||||||||||||||    
T  3561457 ttttttcggattatagaatctgaacaccctcctaaacaccctttttcaagggaaaaac 3561400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 328
Target Start/End: Complemental strand, 15069969 - 15069913
Alignment:
Q  274 tacatgatttttccggattacataatccg--aacacccctaaacaccctttttcaag 328  Q
    |||||||| ||||||||||| ||||||||  ||| |||||||||||| |||||||||    
T  15069969 tacatgatgtttccggattatataatccggaaacccccctaaacaccatttttcaag 15069913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 33611537 - 33611476
Alignment:
Q  274 tacatgatttttccggattacataatc-cgaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||  |||  |||||||||||||||||| |||| ||||    
T  33611537 tacatgatgtttccggattacataatctggaaaccccctaaacacccttttttaaggtaaaa 33611476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 40650802 - 40650741
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| |||| ||||||||||||||| | ||||| |||||||| |||||||||| ||||    
T  40650802 tacatgatgtttctggattacataatccggaaaccccttaaacaccatttttcaaggtaaaa 40650741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 42545999 - 42546060
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||| |||| ||||||| ||||| ||| ||||||||||||||| ||||    
T  42545999 tacatgatgtttccggataacatgatccgaaaaccccctaagcaccctttttcaaggtaaaa 42546060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 41584797 - 41584741
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagg 329  Q
    |||||||| ||| ||||||||||||||| |||  |||||||||| ||||||||||||    
T  41584797 tacatgatgttttcggattacataatccggaaaccccctaaacatcctttttcaagg 41584741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 6467729 - 6467792
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaaac 336  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6467729 tacatgatttgttcggattacataatccgaacaccccctaaacaccctttttcaagggaaaaac 6467792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 7114754 - 7114799
Alignment:
Q  105 tttgagtattacttttcccaccctatgcatgactagcgcgccctgt 150  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  7114754 tttgactattacttttcccaccctatgcatgactagcgcgccctgt 7114799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 3936140 - 3936201
Alignment:
Q  274 tacatgatttttccggattacataatccgaaca-cccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| || | ||||||||||||||||||||||| ||||    
T  3936140 tacatgatgtttccggattacataatccaaaaaccccctaaacaccctttttcaaggtaaaa 3936201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 8154931 - 8154992
Alignment:
Q  274 tacatgatttttccggattacataatccgaaca-cccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| |||||||||||||||||||||| | |||||||||||||||||| |||| ||||    
T  8154931 tacatgatgtttccggattacataatccgaaaaccccctaaacacccttttttaaggtaaaa 8154992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 31985645 - 31985588
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaaggg 330  Q
    |||||||||||| ||||||||||||| |||||||||| |||||||| |||||||||||    
T  31985645 tacatgattttttcggattacataattcgaacaccccttaaacaccatttttcaaggg 31985588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 24689777 - 24689817
Alignment:
Q  108 gagtattacttttcccaccctatgcatgactagcgcgccct 148  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  24689777 gagtattactttttccaccctatgcatgactagcgcgccct 24689817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 6467264 - 6467205
Alignment:
Q  278 tgatttttccggattacataatccgaacaccc-ctaaacaccctttttcaagggaaaaac 336  Q
    |||||||||||||||| | ||||||||||||| ||||||| | |||||||||||||||||    
T  6467264 tgatttttccggattatagaatccgaacaccctctaaacatcatttttcaagggaaaaac 6467205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 24690457 - 24690398
Alignment:
Q  278 tgatttttccggattacataatccgaacacccct-aaacaccctttttcaagggaaaaac 336  Q
    |||||||| | ||||| | ||||||||||||||| |||||||||||||||||||||||||    
T  24690457 tgattttttcagattatacaatccgaacacccctcaaacaccctttttcaagggaaaaac 24690398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 24042315 - 24042254
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||| |||||||||| ||||    
T  24042315 tacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaa 24042254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 28230591 - 28230534
Alignment:
Q  278 tgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||| |||||||||||||||||||| | ||||| ||||||||||||||||||| ||||    
T  28230591 tgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 28230534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 47202526 - 47202587
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||||||||| |||| ||||    
T  47202526 tacatgatgtttccggattacataatccggaaaccccctaaacacccttttttaaggtaaaa 47202587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 7115524 - 7115477
Alignment:
Q  148 tgtgcaatttggattttaaaattcggattcagtttttcctttgttata 195  Q
    ||||| ||||||||||||||||  | ||||||||||||||||||||||    
T  7115524 tgtgcgatttggattttaaaatctgaattcagtttttcctttgttata 7115477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 328
Target Start/End: Complemental strand, 19225725 - 19225670
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaag 328  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||| |||||||||    
T  19225725 tacatgatgtttccggattacataatccggaaatcccctaaacaccatttttcaag 19225670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 31643073 - 31643134
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  |||| ||||||||||||| |||| ||||    
T  31643073 tacatgatgtttccggattacataatccggaaaccccccaaacacccttttttaaggtaaaa 31643134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 37518422 - 37518361
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||  ||||||||||||||||||| |||  |||||||||||| |||||||||| ||||    
T  37518422 tacatgaagtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaa 37518361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 42925768 - 42925707
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||| ||||||||||||||| |||  |||||||||||| |||||||||| ||||    
T  42925768 tacatgatgttttcggattacataatccggaaaccccctaaacaccttttttcaaggtaaaa 42925707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 336
Target Start/End: Original strand, 30861142 - 30861198
Alignment:
Q  281 tttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaaac 336  Q
    ||||| ||||||| | |||||||||||||| |||||||| ||||||| |||||||||    
T  30861142 ttttttcggattatagaatccgaacaccccataaacaccttttttcaggggaaaaac 30861198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 335
Target Start/End: Complemental strand, 30721933 - 30721870
Alignment:
Q  274 tacatgatttttccggattacataatccgaaca--cccctaaacaccctttttcaagggaaaaa 335  Q
    |||||||||||| ||||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  30721933 tacatgattttttcggattacataatccgaacactcccctaaacaccatttttcaagggaaaaa 30721870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 51258434 - 51258497
Alignment:
Q  274 tacatgatttttccggattacataatccgaaca-cccctaaacaccctttttcaagggaaaaac 336  Q
    ||||| |||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  51258434 tacataattttttcggattacataatccgaacaccccctaaacaccatttttcaagggaaaaac 51258497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 47740059 - 47739998
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  ||||||||||||||||||||||| ||||    
T  47740059 tacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 47739998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 336
Target Start/End: Complemental strand, 5128019 - 5127964
Alignment:
Q  281 tttttccggattacataatccgaacacccctaaacaccctttttcaagggaaaaac 336  Q
    ||||||||||||| |||||||||||||| ||||||||   ||||||||||||||||    
T  5128019 tttttccggattatataatccgaacacctctaaacacttattttcaagggaaaaac 5127964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 47302051 - 47302102
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacc-cctaaacacccttttt 324  Q
    |||||||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  47302051 tacatgatgtttccggattacataatccgaaaacctcctaaacacccttttt 47302102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 49096354 - 49096293
Alignment:
Q  274 tacatgatttttccggattacataatccgaaca-cccctaaacaccctttttcaagggaaaa 334  Q
    |||||||||||| || |||||||||||| |||| |||||||||| |||||||||||| ||||    
T  49096354 tacatgattttttcgaattacataatccaaacaccccctaaacagcctttttcaaggaaaaa 49096293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 50716284 - 50716345
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||| |||||||||||||| | ||||| ||||||||||||||||||| ||||    
T  50716284 tacatgatgtttccagattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 50716345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 50796563 - 50796502
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||| |||||||||||||| | ||||| ||||||||||||||||||| ||||    
T  50796563 tacatgatgtttccagattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 50796502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 336
Target Start/End: Original strand, 29048381 - 29048437
Alignment:
Q  281 tttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaaac 336  Q
    ||||| ||||||| | |||||||||||||| |||||| |||||||||||||||||||    
T  29048381 ttttttcggattatagaatccgaacaccccctaaacatcctttttcaagggaaaaac 29048437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 51816280 - 51816335
Alignment:
Q  278 tgatttttccggattacataatccgaacaccc-ctaaacaccctttttcaagggaa 332  Q
    |||||||| ||||||| | || |||||||||| |||||||||||||||||||||||    
T  51816280 tgattttttcggattatagaacccgaacaccctctaaacaccctttttcaagggaa 51816335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 3352193 - 3352132
Alignment:
Q  274 tacatgatttttccggattacataa-tccgaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| |||||||||||||||| || |||  |||||||||||||||| |||||| ||||    
T  3352193 tacatgatgtttccggattacataattcggaaaccccctaaacaccctttatcaaggtaaaa 3352132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 3902933 - 3902872
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| |||  ||||||||||||||| | ||||| ||||||||||||||||||| ||||    
T  3902933 tacatgatgtttttggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 3902872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 34821470 - 34821409
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||| ||||||||||||||| |||  |||||||||||| |||||||||| ||||    
T  34821470 tacatgatgttttcggattacataatccggaaaccccctaaacaccatttttcaaggtaaaa 34821409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 35142106 - 35142167
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||| ||||| |||| ||||    
T  35142106 tacatgatgtttccggattacataatccggaaaccccctaaacaccattttttaaggtaaaa 35142167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 43473096 - 43473035
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||| ||||| |||| ||||    
T  43473096 tacatgatgtttccggattacataatccggaaaccccctaaacaccattttttaaggtaaaa 43473035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 51540741 - 51540680
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| |||||| ||||||||||||| | ||||| |||||||| |||||||||| ||||    
T  51540741 tacatgatgtttccgaattacataatccggaaaccccttaaacaccgtttttcaaggtaaaa 51540680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 334
Target Start/End: Original strand, 39149850 - 39149902
Alignment:
Q  283 tttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    ||||||||||||||||||| |||  |||||||||||| |||||||||| ||||    
T  39149850 tttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaa 39149902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 6e-16; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 336
Target Start/End: Complemental strand, 3703377 - 3703314
Alignment:
Q  274 tacatgatttttccggattacataatccgaaca-cccctaaacaccctttttcaagggaaaaac 336  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  3703377 tacatgattttttcggattacataattcgaacaccccctaaacaccatttttcaagggaaaaac 3703314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 273 - 335
Target Start/End: Original strand, 8106431 - 8106494
Alignment:
Q  273 ctacatgatttttccggattacataatccgaaca-cccctaaacaccctttttcaagggaaaaa 335  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||| |||||| |||||||||    
T  8106431 ctacatgatttttccgtattacataatccgaacaccccctaaacaccatttttctagggaaaaa 8106494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 2506158 - 2506097
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  ||||||||||||||||||||||| ||||    
T  2506158 tacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 2506097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 19835560 - 19835621
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  ||||||||||||||||||||||| ||||    
T  19835560 tacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 19835621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 25752571 - 25752510
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||| |||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  25752571 tacatgatgtttccagattacataatccgaaaaccccataaacaccctttttcaaggtaaaa 25752510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 46440401 - 46440340
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  ||||||||||||||||||||||| ||||    
T  46440401 tacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 46440340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 8106306 - 8106353
Alignment:
Q  148 tgtgcaatttggattttaaaattcggattcagtttttcctttgttata 195  Q
    ||||||||  |||||||||||| |||||||||||||||||||||||||    
T  8106306 tgtgcaatcaggattttaaaatccggattcagtttttcctttgttata 8106353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 41323203 - 41323157
Alignment:
Q  290 attacataatccgaacacccctaaacaccctttttcaagggaaaaac 336  Q
    |||| |||||| |||||||| ||||||||||||||||||||||||||    
T  41323203 attatataatcggaacacccttaaacaccctttttcaagggaaaaac 41323157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 148
Target Start/End: Original strand, 8106242 - 8106283
Alignment:
Q  107 tgagtattacttttcccaccctatgcatgactagcgcgccct 148  Q
    ||||||||||||| |||||||||||||||||||| |||||||    
T  8106242 tgagtattactttacccaccctatgcatgactagtgcgccct 8106283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 25491522 - 25491461
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||| |||||||||| ||||    
T  25491522 tacatgatgtttccggattacataatccggaaaccccctaaacaccttttttcaaggtaaaa 25491461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 40703704 - 40703765
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| |||||||||||||||| | ||| ||||| ||||||||||||||||||| ||||    
T  40703704 tacatgatgtttccggattacataacctgaaaaccccctaaacaccctttttcaaggtaaaa 40703765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 32441851 - 32441911
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| |||||||||||||||||||| | ||||||||||||  ||||| |||| ||||    
T  32441851 tacatgatgtttccggattacataatccggaaacccctaaacacatttttttaaggtaaaa 32441911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 38416605 - 38416641
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc 310  Q
    |||||||||||| ||||||||||||||||||||||||    
T  38416605 tacatgattttttcggattacataatccgaacacccc 38416641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 8107107 - 8107064
Alignment:
Q  107 tgagtattacttttcccaccctatgcatgactagcgcgccctgt 150  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||    
T  8107107 tgagtattacttttcctaccatatgcatgactagtgcgccctgt 8107064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 23523946 - 23523997
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacacccttttt 324  Q
    |||||||| ||||||||||||||||||| |||  ||||||||||||||||||    
T  23523946 tacatgatgtttccggattacataatccagaaaccccctaaacacccttttt 23523997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 55052743 - 55052685
Alignment:
Q  277 atgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    ||||| ||||||||||| |||||||| | ||||| ||||||||||||||||||| ||||    
T  55052743 atgatgtttccggattatataatccggaaaccccctaaacaccctttttcaaggtaaaa 55052685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 17933264 - 17933203
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| |||||||||||||||||| | | ||||| |||||||||||||| |||| ||||    
T  17933264 tacatgatgtttccggattacataatctggaaaccccttaaacacccttttttaaggtaaaa 17933203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 29822659 - 29822720
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| ||| |||||||||||||||| | ||||| |||||||||| |||||||| ||||    
T  29822659 tacatgatgttttcggattacataatccggaaaccccataaacaccctctttcaaggtaaaa 29822720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 31582549 - 31582488
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| ||| | |||||||||||||| | ||||| ||||||||||||||||||| ||||    
T  31582549 tacatgatgttttctgattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 31582488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 38536210 - 38536271
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||| ||||||||||||| |||  |||||||||||| |||||||||| ||||    
T  38536210 tacatgatgtttccagattacataatccggaaaccccctaaacaccttttttcaaggtaaaa 38536271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 41413227 - 41413166
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  ||||||||||| |||||| |||| ||||    
T  41413227 tacatgatgtttccggattacataatccggaaaccccctaaacactcttttttaaggtaaaa 41413166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 25539075 - 25538991
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaaactcaaattttaaacatgtttgt 357  Q
    |||||||| |||| |||||||||||||| |||  |||||||||||  |||||||||| |  | | |||||| |||||||||||||    
T  25539075 tacatgatgtttctggattacataatccggaaaccccctaaacactatttttcaaggtatcagcacaaattctaaacatgtttgt 25538991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 25217912 - 25217852
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| |||||||||||||||||||| | |||||||||||||| ||||||||| ||||    
T  25217912 tacatgatgtttccggattacataatccggaaacccctaaacaccccttttcaaggtaaaa 25217852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 41203310 - 41203246
Alignment:
Q  273 ctacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaaac 336  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||    
T  41203310 ctacataatttttctggattacataatccgaacaccccgtaaacaccctttttaaagagaaaaac 41203246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 336
Target Start/End: Complemental strand, 38066792 - 38066733
Alignment:
Q  277 atgatttttccggattacataatccgaacacccctaaacaccctttttcaagggaaaaac 336  Q
    ||||||||| |||||||||||| || ||||||| ||||||||| ||||||||||||||||    
T  38066792 atgattttttcggattacataacccaaacacccataaacaccccttttcaagggaaaaac 38066733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 4268360 - 4268299
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| |||||||||||||||||||| | ||||| ||||||||||||||||||| ||||    
T  4268360 tacatgatgtttccggattacataatccggaaaccccataaacaccctttttcaaggtaaaa 4268299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 15995233 - 15995180
Alignment:
Q  276 catgatttttccggattacataatccgaaca-cccctaaacaccctttttcaag 328  Q
    |||||| |||||||||||||||||||||| | ||||||||||||||||||||||    
T  15995233 catgatgtttccggattacataatccgaaaaccccctaaacaccctttttcaag 15995180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 45153913 - 45153852
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  ||||||||||||||||||||||| ||||    
T  45153913 tacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 45153852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 34517133 - 34517195
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccct-aaacaccctttttcaagggaaaaac 336  Q
    ||||||||||||| |||||||||||||| || |||||| ||||||| |||||||||||||||||    
T  34517133 tacatgatttttc-ggattacataatccaaataccccttaaacaccatttttcaagggaaaaac 34517195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 33452565 - 33452504
Alignment:
Q  274 tacatgatttttccggattacataatccgaacac-ccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||| |||||||||| | || |||||||||||||||||||||| ||||    
T  33452565 tacatgatgtttccggatcacataatccggaaactccctaaacaccctttttcaaggtaaaa 33452504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 41855021 - 41854960
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| |||||||||||||| ||||| | ||||| ||||||||||||||||||| ||||    
T  41855021 tacatgatgtttccggattacatgatccggaaaccccctaaacaccctttttcaaggtaaaa 41854960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 42894409 - 42894470
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||| |||||||||| ||||    
T  42894409 tacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaa 42894470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 38308278 - 38308322
Alignment:
Q  106 ttgagtattacttttcccaccctatgcatgactagcgcgccctgt 150  Q
    |||| |||||||||||||||||||||||||||| |||||| ||||    
T  38308278 ttgactattacttttcccaccctatgcatgactggcgcgctctgt 38308322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 336
Target Start/End: Original strand, 30763679 - 30763737
Alignment:
Q  278 tgatttttccggattacataatccgaacacccctaaacaccctttttcaagggaaaaac 336  Q
    ||||||||  |||||| ||||||||||||||| |||||||| ||||||||  |||||||    
T  30763679 tgatttttttggattatataatccgaacacccttaaacaccatttttcaaaagaaaaac 30763737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 17474921 - 17474860
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||  |||||||||| ||||    
T  17474921 tacatgatgtttccggattacataatccggaaaccccctaaacacaatttttcaaggtaaaa 17474860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 32187991 - 32187930
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  |||| ||||||| |||||||||| ||||    
T  32187991 tacatgatgtttccggattacataatccggaaacccccgaaacaccatttttcaaggtaaaa 32187930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 36875017 - 36875078
Alignment:
Q  274 tacatgatttttccggattacataatccgaacaccc-ctaaacaccctttttcaagggaaaa 334  Q
    |||||||| |||||||||||||||||||| | |||| || |||||| |||||||||| ||||    
T  36875017 tacatgatgtttccggattacataatccggaaaccctctgaacaccatttttcaaggtaaaa 36875078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 38308912 - 38308879
Alignment:
Q  278 tgatttttccggattacataatccgaacacccct 311  Q
    |||||||||||||||| |||||||||||||||||    
T  38308912 tgatttttccggattatataatccgaacacccct 38308879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 39447194 - 39447255
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| ||| |||||||||||||| | | ||||| ||||||||||||||||||| ||||    
T  39447194 tacatgatgttttcggattacataatctggaaaccccataaacaccctttttcaaggtaaaa 39447255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 335
Target Start/End: Complemental strand, 19110103 - 19110075
Alignment:
Q  307 cccctaaacaccctttttcaagggaaaaa 335  Q
    |||||||||||||||||||||||||||||    
T  19110103 cccctaaacaccctttttcaagggaaaaa 19110075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 33366959 - 33366995
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc 310  Q
    |||||||| |||||||||||||||||||||| |||||    
T  33366959 tacatgatatttccggattacataatccgaaaacccc 33366995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 38309032 - 38308980
Alignment:
Q  148 tgtgcaatttggattttaaaattcggattcagtttttcctttgttatatggtg 200  Q
    ||||||||| |||||||  ||| || |||||||||||||||||||||| ||||    
T  38309032 tgtgcaattcggattttgtaatccgaattcagtttttcctttgttatagggtg 38308980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 3522 - 3461
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||||| |||||||||||||||||||| | ||||| ||||||||||||||||||| ||||    
T  3522 tacatgatgtttccggattacataatccggaaaccccataaacaccctttttcaaggtaaaa 3461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 142090 - 142029
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  ||||||||||||||||||||||| ||||    
T  142090 tacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 142029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 44106255 - 44106316
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  ||||||||||||||||||||||| ||||    
T  44106255 tacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 44106316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 336
Target Start/End: Original strand, 1076595 - 1076650
Alignment:
Q  281 tttttccggattacataatccgaacacccctaaacaccctttttcaagggaaaaac 336  Q
    ||||||| ||||| |||||||||||||||||||||||   ||||||||||||||||    
T  1076595 tttttccagattatataatccgaacacccctaaacacttattttcaagggaaaaac 1076650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 328
Target Start/End: Original strand, 36980623 - 36980673
Alignment:
Q  278 tgatttttccggattacataatccgaacacccctaaacaccctttttcaag 328  Q
    |||||||| ||||||| |  |||||||||||||||||||||||||||||||    
T  36980623 tgattttttcggattatagcatccgaacacccctaaacaccctttttcaag 36980673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 3094713 - 3094774
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||| |||||||||| ||||    
T  3094713 tacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaa 3094774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 8885580 - 8885519
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  ||||||||||||| ||||||||| ||||    
T  8885580 tacatgatgtttccggattacataatccggaaaccccctaaacacccattttcaaggtaaaa 8885519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 31520019 - 31519958
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||||||||| |||| ||||    
T  31520019 tacatgatgtttccggattacataatccggaaaccccctaaacacccttttttaaggtaaaa 31519958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 310
Target Start/End: Complemental strand, 35676662 - 35676629
Alignment:
Q  277 atgatttttccggattacataatccgaacacccc 310  Q
    ||||||||||||||||||||||||||||||||||    
T  35676662 atgatttttccggattacataatccgaacacccc 35676629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 40994824 - 40994885
Alignment:
Q  274 tacatgatttttccggattacataatccgaaca-cccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| |||||||||||||||||| ||| | |||||||||||||||| |||||| ||||    
T  40994824 tacatgatgtttccggattacataatctgaaaaccccctaaacaccctttatcaaggtaaaa 40994885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 17120134 - 17120082
Alignment:
Q  148 tgtgcaatttggattttaaaattcggattcagtttttcctttgttatatggtg 200  Q
    |||||||| ||||||||| ||| || |||||||||||||||||||||| ||||    
T  17120134 tgtgcaatgtggattttataatccgaattcagtttttcctttgttatagggtg 17120082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 139
Target Start/End: Original strand, 17119312 - 17119343
Alignment:
Q  108 gagtattacttttcccaccctatgcatgacta 139  Q
    ||||||||||||||||||||||||||||||||    
T  17119312 gagtattacttttcccaccctatgcatgacta 17119343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 334
Target Start/End: Complemental strand, 42281016 - 42280957
Alignment:
Q  276 catgatttttccggattacataatccgaacacccc-taaacaccctttttcaagggaaaa 334  Q
    |||||| ||||| |||||||||||||| | ||||| ||||||||||||||||||| ||||    
T  42281016 catgatgtttccagattacataatccggaaaccccctaaacaccctttttcaaggtaaaa 42280957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 9073536 - 9073590
Alignment:
Q  274 tacatgatttttccggattacataatcc-gaacacccctaaacaccctttttcaa 327  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||| ||||||||    
T  9073536 tacatgatgtttccggattacataatccagaaaccccctaaacaccttttttcaa 9073590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 16310634 - 16310692
Alignment:
Q  277 atgatttttccggattacataatccgaacac-ccctaaacaccctttttcaagggaaaa 334  Q
    ||||||||||||||||||| |||||  | || |||||||||||||||||||||| ||||    
T  16310634 atgatttttccggattacacaatccagaaactccctaaacaccctttttcaaggtaaaa 16310692  T

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Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 36404281 - 36404232
Alignment:
Q  274 tacatgatttttccggattacataatccgaacacccctaaacacccttttt 324  Q
    ||||||||||||| |||||| |||||||||| || ||||||||||||||||    
T  36404281 tacatgatttttc-ggattatataatccgaaaactcctaaacacccttttt 36404232  T

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Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 37248593 - 37248651
Alignment:
Q  277 atgatttttccggattacataatcc-gaacacccctaaacaccctttttcaagggaaaa 334  Q
    ||||| ||||||||||||||||||| |||  |||||||||||| |||||||||| ||||    
T  37248593 atgatgtttccggattacataatccagaaaccccctaaacaccatttttcaaggtaaaa 37248651  T

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Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 27928068 - 27928007
Alignment:
Q  274 tacatgatttttccggattacataatc-cgaacacccctaaacaccctttttcaagggaaaa 334  Q
    |||||||| ||||||||||||||||||  |||  |||||||||||| |||||||||| ||||    
T  27928068 tacatgatgtttccggattacataatcaggaaaccccctaaacaccatttttcaaggtaaaa 27928007  T

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Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 334
Target Start/End: Original strand, 21004430 - 21004482
Alignment:
Q  283 tttccggattacataatccgaacac-ccctaaacaccctttttcaagggaaaa 334  Q
    |||||||||||||||||||||| || ||||||||||| ||||| |||| ||||    
T  21004430 tttccggattacataatccgaaaactccctaaacaccattttttaaggtaaaa 21004482  T

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Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 35676853 - 35676813
Alignment:
Q  108 gagtattacttttcccaccctatgcatgactagcgcgccct 148  Q
    ||||||||||||||||||||||| |||  ||||||||||||    
T  35676853 gagtattacttttcccaccctatacatttctagcgcgccct 35676813  T

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Target: scaffold0137 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 9624 - 9570
Alignment:
Q  274 tacatgatttttccggattacataatccgaaca-cccctaaacaccctttttcaa 327  Q
    |||||||| |||||||||||||||||||||| | ||||| |||||||||||||||    
T  9624 tacatgatgtttccggattacataatccgaaaaccccctgaacaccctttttcaa 9570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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