View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17248_low_32 (Length: 265)
Name: NF17248_low_32
Description: NF17248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17248_low_32 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 48017265 - 48017505
Alignment:
| Q |
10 |
aaatgaacagttaaaaaatatttgggcgaaaacaatttgtagttaatttttattttgaaaagtgtactttaaagtcttcactacttatactagnnnnnnn |
109 |
Q |
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| T |
48017265 |
aaatgaacagttaaaaaatatttgggcgaaaacaatttgtagttaatttttattttgaaaagtgtactttaaagtcttcactacttatactagaaaaaag |
48017364 |
T |
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| Q |
110 |
ngtaggggaaaacaacatattgacaatataaaaattgggggaaaattgagcttggcatttgatatattaaagtcattcaaatgttaccatttccagtcat |
209 |
Q |
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| T |
48017365 |
gtagggggaaaacaacatattgacaaaataaaaattgggggaaaattgagcttggcatttgatatattaaagtcattcaaatgttaccatttccagtcat |
48017464 |
T |
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| Q |
210 |
gttttatgcactcaatcgacaaacaagaaggacgtaagtgg |
250 |
Q |
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| T |
48017465 |
gttttatgcactcaatcaacaaacaagaaggacgtaagtgg |
48017505 |
T |
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