View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17248_low_37 (Length: 249)
Name: NF17248_low_37
Description: NF17248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17248_low_37 |
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Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 54 - 242
Target Start/End: Original strand, 5062686 - 5062874
Alignment:
| Q |
54 |
gttaaatatgtgtgctaaaataaataatgtatgatcaaatagttgtgaccatacaagcttcacataagatgggaaggaaaaaatttagaaaaggtgttaa |
153 |
Q |
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| T |
5062686 |
gttaaatatgtgtgctaaaataaataatgtatgatcaaatagttgtgaccatacaagcttcacataagatgggaaggaaaaaatttagaaaaggtgttaa |
5062785 |
T |
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| Q |
154 |
tgctaccaattcatacttattttaaaatggtctttcaaccattcatagttattataattgtatttatttatcagctcctgtttcttctc |
242 |
Q |
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| T |
5062786 |
tgctaccaattcatacttattttaaaatggtctttcaaccattcatagttattataattgtatttatttatcagctcctgtttcttctc |
5062874 |
T |
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