View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1725-Insertion-3 (Length: 916)

Name: NF1725-Insertion-3
Description: NF1725
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1725-Insertion-3
NF1725-Insertion-3
[»] chr1 (32 HSPs)
chr1 (26-382)||(43858594-43858947)
chr1 (584-836)||(43855868-43856118)
chr1 (437-600)||(43856134-43856297)
chr1 (835-916)||(15660567-15660647)
chr1 (835-916)||(9361953-9362033)
chr1 (835-916)||(35531472-35531552)
chr1 (844-916)||(45226754-45226825)
chr1 (841-916)||(7782937-7783011)
chr1 (845-916)||(30686401-30686471)
chr1 (844-915)||(35483957-35484027)
chr1 (845-915)||(13507760-13507829)
chr1 (845-915)||(13514948-13515017)
chr1 (880-916)||(8464626-8464662)
chr1 (880-916)||(10675926-10675962)
chr1 (835-916)||(31588916-31588996)
chr1 (880-916)||(37437230-37437266)
chr1 (880-916)||(51613435-51613471)
chr1 (844-916)||(19093257-19093328)
chr1 (882-916)||(38597617-38597651)
chr1 (844-915)||(43952777-43952847)
chr1 (834-916)||(21927873-21927954)
chr1 (834-916)||(37735316-37735397)
chr1 (880-916)||(1038107-1038143)
chr1 (880-916)||(1045013-1045049)
chr1 (880-916)||(19929643-19929679)
chr1 (880-916)||(32994646-32994682)
chr1 (880-916)||(35255510-35255546)
chr1 (880-916)||(38648481-38648517)
chr1 (880-916)||(40926920-40926956)
chr1 (880-916)||(52749041-52749077)
chr1 (880-915)||(4101087-4101122)
chr1 (883-914)||(18034005-18034036)
[»] chr4 (41 HSPs)
chr4 (835-916)||(53599967-53600047)
chr4 (834-916)||(56576284-56576365)
chr4 (835-916)||(3436248-3436328)
chr4 (835-916)||(12252083-12252163)
chr4 (835-916)||(44014094-44014174)
chr4 (834-916)||(19527389-19527470)
chr4 (834-916)||(38617488-38617569)
chr4 (834-916)||(52677326-52677407)
chr4 (880-916)||(13629374-13629410)
chr4 (880-916)||(21044928-21044964)
chr4 (880-916)||(26620532-26620568)
chr4 (880-916)||(27492386-27492422)
chr4 (880-916)||(31862167-31862203)
chr4 (835-916)||(37394340-37394420)
chr4 (880-916)||(46871948-46871984)
chr4 (880-916)||(48782227-48782263)
chr4 (834-914)||(4201501-4201580)
chr4 (844-916)||(16464963-16465034)
chr4 (844-916)||(55935099-55935170)
chr4 (845-916)||(9834257-9834327)
chr4 (849-916)||(34464274-34464340)
chr4 (846-916)||(29295348-29295417)
chr4 (846-916)||(47093806-47093875)
chr4 (880-916)||(353993-354029)
chr4 (880-916)||(6195051-6195087)
chr4 (880-916)||(22828582-22828618)
chr4 (880-916)||(23623676-23623712)
chr4 (880-916)||(30939182-30939218)
chr4 (880-916)||(34361083-34361119)
chr4 (880-916)||(36659608-36659644)
chr4 (845-914)||(36750170-36750238)
chr4 (880-916)||(39671352-39671388)
chr4 (880-916)||(42133064-42133100)
chr4 (880-916)||(44069058-44069094)
chr4 (880-916)||(47428556-47428592)
chr4 (880-915)||(9220223-9220258)
chr4 (880-915)||(40411970-40412005)
chr4 (886-916)||(42645340-42645370)
chr4 (880-914)||(43888010-43888044)
chr4 (886-916)||(52257972-52258002)
chr4 (880-914)||(53691837-53691871)
[»] chr8 (37 HSPs)
chr8 (844-916)||(2335422-2335493)
chr8 (835-916)||(8731007-8731087)
chr8 (835-916)||(23429889-23429969)
chr8 (835-916)||(26062688-26062768)
chr8 (835-916)||(39303696-39303776)
chr8 (844-916)||(7483733-7483804)
chr8 (834-914)||(27518889-27518968)
chr8 (845-916)||(6750605-6750675)
chr8 (845-916)||(6757396-6757466)
chr8 (835-914)||(14228503-14228582)
chr8 (880-916)||(3720704-3720740)
chr8 (880-916)||(4057312-4057348)
chr8 (835-916)||(14263524-14263604)
chr8 (880-916)||(17718527-17718563)
chr8 (880-916)||(35296068-35296104)
chr8 (880-916)||(38482972-38483008)
chr8 (844-916)||(9954638-9954709)
chr8 (844-916)||(13327768-13327839)
chr8 (880-915)||(40228319-40228354)
chr8 (834-916)||(14061329-14061410)
chr8 (844-914)||(16701075-16701144)
chr8 (834-916)||(21651926-21652007)
chr8 (883-916)||(40521424-40521457)
chr8 (883-916)||(43642169-43642202)
chr8 (883-916)||(45281557-45281590)
chr8 (880-916)||(11707665-11707701)
chr8 (880-916)||(13173953-13173989)
chr8 (834-915)||(15596323-15596403)
chr8 (880-916)||(18291488-18291524)
chr8 (880-916)||(33935240-33935276)
chr8 (880-916)||(34046875-34046911)
chr8 (880-916)||(34981853-34981889)
chr8 (880-916)||(35052077-35052113)
chr8 (880-916)||(40604031-40604067)
chr8 (885-916)||(2456290-2456321)
chr8 (886-916)||(8672332-8672362)
chr8 (883-916)||(15647579-15647612)
[»] chr6 (19 HSPs)
chr6 (832-916)||(8176413-8176496)
chr6 (835-916)||(3849045-3849125)
chr6 (834-914)||(23923896-23923975)
chr6 (844-916)||(34378848-34378919)
chr6 (834-916)||(9838303-9838384)
chr6 (835-916)||(373703-373783)
chr6 (835-916)||(17193138-17193218)
chr6 (880-916)||(24356235-24356271)
chr6 (880-916)||(33260724-33260760)
chr6 (835-915)||(30388701-30388780)
chr6 (883-916)||(24663406-24663439)
chr6 (834-916)||(26470904-26470985)
chr6 (880-916)||(17251437-17251473)
chr6 (880-916)||(22050073-22050109)
chr6 (880-916)||(22784849-22784885)
chr6 (880-915)||(12732200-12732235)
chr6 (886-916)||(32359616-32359646)
chr6 (887-916)||(17124164-17124193)
chr6 (887-916)||(31244930-31244959)
[»] chr2 (35 HSPs)
chr2 (844-916)||(2012850-2012921)
chr2 (835-916)||(10812179-10812259)
chr2 (834-914)||(14295942-14296021)
chr2 (844-916)||(36375560-36375631)
chr2 (830-914)||(37093426-37093508)
chr2 (850-916)||(15677474-15677539)
chr2 (834-916)||(31025123-31025204)
chr2 (880-916)||(479156-479192)
chr2 (880-916)||(6013499-6013535)
chr2 (835-916)||(15893763-15893843)
chr2 (880-916)||(25187310-25187346)
chr2 (835-916)||(26342560-26342640)
chr2 (880-916)||(32854963-32854999)
chr2 (835-916)||(34357158-34357238)
chr2 (880-916)||(41885649-41885685)
chr2 (880-916)||(43077316-43077352)
chr2 (844-916)||(28145755-28145826)
chr2 (882-916)||(1395591-1395625)
chr2 (835-914)||(13753935-13754013)
chr2 (880-916)||(3363608-3363644)
chr2 (880-916)||(4883627-4883663)
chr2 (880-916)||(8443715-8443751)
chr2 (880-916)||(9369998-9370034)
chr2 (880-916)||(10263780-10263816)
chr2 (880-916)||(11222499-11222535)
chr2 (880-916)||(11560230-11560266)
chr2 (880-916)||(13001094-13001130)
chr2 (880-916)||(13849898-13849934)
chr2 (880-916)||(36405025-36405061)
chr2 (880-916)||(44360458-44360494)
chr2 (880-915)||(13215417-13215452)
chr2 (834-914)||(14288410-14288489)
chr2 (886-916)||(37116776-37116806)
chr2 (694-735)||(9431029-9431070)
chr2 (883-916)||(34309233-34309266)
[»] chr7 (27 HSPs)
chr7 (835-916)||(17896706-17896786)
chr7 (843-916)||(41891257-41891330)
chr7 (844-916)||(30866919-30866990)
chr7 (834-916)||(18470286-18470367)
chr7 (880-916)||(8264971-8265007)
chr7 (880-916)||(31430583-31430619)
chr7 (880-916)||(33100016-33100052)
chr7 (880-916)||(33173831-33173867)
chr7 (880-916)||(42842049-42842085)
chr7 (880-915)||(32528512-32528547)
chr7 (881-916)||(33921957-33921992)
chr7 (845-916)||(2408844-2408914)
chr7 (883-916)||(29497717-29497750)
chr7 (880-916)||(1553539-1553575)
chr7 (880-916)||(7477381-7477417)
chr7 (880-916)||(10227280-10227316)
chr7 (880-916)||(13431314-13431350)
chr7 (880-916)||(20035072-20035108)
chr7 (880-916)||(20045483-20045519)
chr7 (880-916)||(24283606-24283642)
chr7 (884-916)||(26632363-26632395)
chr7 (880-916)||(34368842-34368878)
chr7 (880-916)||(46286028-46286064)
chr7 (881-916)||(17354209-17354244)
chr7 (349-399)||(21311692-21311742)
chr7 (886-916)||(36648188-36648218)
chr7 (887-916)||(37354042-37354071)
[»] chr5 (36 HSPs)
chr5 (835-916)||(4175657-4175737)
chr5 (835-916)||(42394305-42394385)
chr5 (834-916)||(12784619-12784700)
chr5 (834-916)||(38702102-38702183)
chr5 (835-916)||(1297915-1297995)
chr5 (835-916)||(5144175-5144255)
chr5 (880-916)||(9076077-9076113)
chr5 (880-916)||(12664864-12664900)
chr5 (880-916)||(21606435-21606471)
chr5 (834-915)||(28024437-28024517)
chr5 (880-916)||(32440089-32440125)
chr5 (880-916)||(38017454-38017490)
chr5 (835-916)||(38297793-38297874)
chr5 (880-916)||(38363197-38363233)
chr5 (835-916)||(39073006-39073086)
chr5 (844-916)||(6007854-6007925)
chr5 (844-916)||(18465672-18465743)
chr5 (880-914)||(6754358-6754392)
chr5 (880-914)||(12870078-12870112)
chr5 (845-916)||(26854271-26854341)
chr5 (846-916)||(18794756-18794825)
chr5 (834-916)||(28463562-28463643)
chr5 (880-916)||(1088110-1088146)
chr5 (880-916)||(4694770-4694806)
chr5 (883-915)||(4962364-4962396)
chr5 (880-916)||(4985352-4985388)
chr5 (880-916)||(26906497-26906533)
chr5 (880-916)||(34261318-34261354)
chr5 (880-916)||(36239464-36239500)
chr5 (880-916)||(38160298-38160334)
chr5 (880-916)||(39893986-39894022)
chr5 (880-916)||(40209145-40209181)
chr5 (880-916)||(42911556-42911592)
chr5 (880-914)||(40198794-40198828)
chr5 (887-916)||(24075015-24075044)
chr5 (887-916)||(32388999-32389028)
[»] chr3 (34 HSPs)
chr3 (835-916)||(53745467-53745547)
chr3 (844-916)||(43554379-43554450)
chr3 (846-916)||(54106254-54106323)
chr3 (880-916)||(2154225-2154261)
chr3 (880-916)||(3643381-3643417)
chr3 (880-916)||(19550270-19550306)
chr3 (880-916)||(20848905-20848941)
chr3 (880-916)||(27039792-27039828)
chr3 (880-916)||(33874732-33874768)
chr3 (880-916)||(47104341-47104377)
chr3 (880-916)||(51219270-51219306)
chr3 (880-916)||(52175744-52175780)
chr3 (844-916)||(20105181-20105252)
chr3 (880-915)||(32854135-32854170)
chr3 (844-916)||(50091934-50092005)
chr3 (880-914)||(17102778-17102812)
chr3 (845-916)||(54898272-54898342)
chr3 (835-916)||(790530-790610)
chr3 (880-916)||(5244121-5244157)
chr3 (880-916)||(7328479-7328515)
chr3 (880-916)||(27028201-27028237)
chr3 (880-916)||(27483972-27484008)
chr3 (880-916)||(33491325-33491361)
chr3 (880-916)||(36234391-36234427)
chr3 (880-916)||(42515358-42515394)
chr3 (880-916)||(47070043-47070079)
chr3 (880-916)||(51244648-51244684)
chr3 (880-916)||(52173771-52173807)
chr3 (880-916)||(54334369-54334405)
chr3 (880-915)||(51697751-51697786)
chr3 (880-914)||(45513803-45513837)
chr3 (880-914)||(46973447-46973481)
chr3 (883-916)||(39867035-39867068)
chr3 (887-916)||(45145160-45145189)
[»] scaffold0024 (2 HSPs)
scaffold0024 (845-916)||(49137-49207)
scaffold0024 (349-401)||(34328-34380)
[»] scaffold0343 (1 HSPs)
scaffold0343 (880-916)||(7448-7484)
[»] scaffold1213 (1 HSPs)
scaffold1213 (880-916)||(148-184)
[»] scaffold0192 (1 HSPs)
scaffold0192 (880-916)||(14902-14938)
[»] scaffold0040 (1 HSPs)
scaffold0040 (880-916)||(69124-69160)
[»] scaffold0018 (1 HSPs)
scaffold0018 (835-916)||(184308-184388)
[»] scaffold0009 (1 HSPs)
scaffold0009 (880-916)||(147309-147345)
[»] scaffold0007 (1 HSPs)
scaffold0007 (880-916)||(77112-77148)
[»] scaffold0135 (1 HSPs)
scaffold0135 (880-915)||(30874-30909)
[»] scaffold0886 (1 HSPs)
scaffold0886 (841-916)||(4502-4576)
[»] scaffold0831 (1 HSPs)
scaffold0831 (886-916)||(2837-2867)


Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-131; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 26 - 382
Target Start/End: Complemental strand, 43858947 - 43858594
Alignment:
Q  26 ctttataatttacacgcattactacaataaaaaatggacaaacgtagtagtatttataatatgtt---tctgagtatattatttatataaaaaatgatca 122  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||   ||||||||||||||||||||||||| |||||     
T  43858947 ctttataatttgcacgcattactacaataaaaaatgaacaaacggagtagtatttataatatgttacttctgagtatattatttatataaaaattgatct 43858848  T
Q  123 acagatgtagcaaattaattcaaaagnnnnnnntgttgcttgttgctaaaagagataagcattcaaatgatgataaagttttgttggttcaggttcagta 222  Q
    | |||||||||||||||||| |||||       ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||      ||    
T  43858847 atagatgtagcaaattaattaaaaagaaaaaaatgttgtttgttgcaaaaagagataagcattcaaatgatgataaagttttgttggttcag------ta 43858754  T
Q  223 gaataaaaagtatttcttaaaattgattatttatttgtttgggactcgccaaataaccatgttggacacctacaaggaccaaaaacatctttgtccaaaa 322  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43858753 gaataaaaagtatttcttaaaattgattatttatctgtttgggactcgccaaataaccatgttggacacctacaaggaccaaaaacatctttgtccaaaa 43858654  T
Q  323 agcctctatcaagcctaggttcaattgaaaattgattttctaattttcaaaagttcctaa 382  Q
    | |||||||||||| |||||||||||||||||||||||||| |||| ||||  |||||||    
T  43858653 accctctatcaagcataggttcaattgaaaattgattttctgatttccaaatattcctaa 43858594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 584 - 836
Target Start/End: Complemental strand, 43856118 - 43855868
Alignment:
Q  584 atcaaattcctttattcgcaatagccttccattggctacatgaaattttactttaatgatcgtataaaaagatcattgggccgtaattcaaagtagacaa 683  Q
    |||||||||||||||||| |||||||||||||||||||||| || | |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  43856118 atcaaattcctttattcgtaatagccttccattggctacatcaattgttactttaatgatcgtataaaaagatcattggaccataattcaaagtagacaa 43856019  T
Q  684 ctcctatcatttcaatacttttcacttttgctctcttattgagttgaccgttacagtgtttacaagtattctcaactcgcatcttgacgattaatgttgg 783  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| |||||||||||| || |    
T  43856018 cttctatcatttcaatacttttcacttttgctctcttattgagttgaccgttacggtgtttacaagtactctcaattcgcattttgacgattaatattcg 43855919  T
Q  784 acaaacattatcattattatgatgactctacatatcattatttaagttagtta 836  Q
    ||||||| |||||||||||||||| ||||||  ||||||||||||||||||||    
T  43855918 acaaacaatatcattattatgatggctctac--atcattatttaagttagtta 43855868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 437 - 600
Target Start/End: Complemental strand, 43856297 - 43856134
Alignment:
Q  437 atcagttcaattatacaaaggctcaaatttaacgtacatcacacctccaacaagggttacccccaattatgaaagcgattaaaagcttaagattttctag 536  Q
    ||||| ||||||| |||||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||| |  | ||||||||||||||||||||    
T  43856297 atcagctcaattacacaaaggctcaaatctagcgtacatcacatctccaacaagggttacccccgattatgaaaacagtcaaaagcttaagattttctag 43856198  T
Q  537 gatatgtaatgcttccgaccatcaaagctcaccaacgtttgatagttatcaaattcctttattc 600  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43856197 gatatgtaatgcttccgaccatcaaagctcaccaacgtttgatagttatcaaattcctttattc 43856134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 835 - 916
Target Start/End: Original strand, 15660567 - 15660647
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||| ||||||||||||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||    
T  15660567 tactctctccgttcctttttaagtgtcatttttgga-gaaatattttgttcctatttaactgtcactttcaaagttcaatgc 15660647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 835 - 916
Target Start/End: Original strand, 9361953 - 9362033
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||    
T  9361953 tactccctccgttcctttttaagtgtcatttttg-aagaaattttttgttcctatttaactgtcactttcaaagttcaatgc 9362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 35531552 - 35531472
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||||    
T  35531552 tactccctccgttcctttttaagtgtcacttttgga-gaaaaattttgttcctatttaactgtcactttcaaagttcaatgc 35531472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 844 - 916
Target Start/End: Complemental strand, 45226825 - 45226754
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||||    
T  45226825 cgttcctttttaagtgtcacttttgga-gaaattttttgttcctatttaactgtcactttcaaagttcaatgc 45226754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 841 - 916
Target Start/End: Original strand, 7782937 - 7783011
Alignment:
Q  841 cttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||| ||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||||    
T  7782937 cttcattcctttttaagtgtcacttttgga-gaaaatttttgttcctatttaactgtcactttcaaagttcaatgc 7783011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 845 - 916
Target Start/End: Original strand, 30686401 - 30686471
Alignment:
Q  845 gttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||||    
T  30686401 gttcctttttaagtgtcacttttgga-gaaattttttgttcctatttaactgtcactttcaaagttcaatgc 30686471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 844 - 915
Target Start/End: Complemental strand, 35484027 - 35483957
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    ||||| ||||||||||||||||||||| |       ||||||||||||||||||||||||||||||||||||    
T  35484027 cgttcatttttaagtgtcatttttgga-gaaaatttttgttcctatttaactgtcactttcaaagttcaatg 35483957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 845 - 915
Target Start/End: Original strand, 13507760 - 13507829
Alignment:
Q  845 gttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    |||||||||||||||||| ||||||| |       ||||||||||||||||||||||||||||||||||||    
T  13507760 gttcctttttaagtgtcacttttgga-gaaattttttgttcctatttaactgtcactttcaaagttcaatg 13507829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 845 - 915
Target Start/End: Original strand, 13514948 - 13515017
Alignment:
Q  845 gttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    |||||||||||||||||| ||||||| |       ||||||||||||||||||||||||||||||||||||    
T  13514948 gttcctttttaagtgtcacttttgga-gaaattttttgttcctatttaactgtcactttcaaagttcaatg 13515017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 8464662 - 8464626
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  8464662 ttgttcctatttaactgtcactttcaaagttcaatgc 8464626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 10675926 - 10675962
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  10675926 ttgttcctatttaactgtcactttcaaagttcaatgc 10675962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 31588996 - 31588916
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || |||||||||||||||||||||||| || |       ||||| |||||||||||||||||||||||||||||||    
T  31588996 tactccctccgttcctttttaagtgtcatttttaga-gaaaatttttgtttctatttaactgtcactttcaaagttcaatgc 31588916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 37437266 - 37437230
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  37437266 ttgttcctatttaactgtcactttcaaagttcaatgc 37437230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 51613435 - 51613471
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  51613435 ttgttcctatttaactgtcactttcaaagttcaatgc 51613471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 844 - 916
Target Start/End: Original strand, 19093257 - 19093328
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||| ||||||| |       ||||||||||||| |||||||||||||||||||||||    
T  19093257 cgttcctttttaagtgtcacttttgga-gaaaaattttgttcctatttacctgtcactttcaaagttcaatgc 19093328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 882 - 916
Target Start/End: Original strand, 38597617 - 38597651
Alignment:
Q  882 gttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||    
T  38597617 gttcctatttaactgtcactttcaaagttcaatgc 38597651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 844 - 915
Target Start/End: Original strand, 43952777 - 43952847
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    |||| |||||||||||||||||||||| |       |||||| |||||||||||||||||||||||||||||    
T  43952777 cgtttctttttaagtgtcatttttgga-gaaattttttgttcttatttaactgtcactttcaaagttcaatg 43952847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 834 - 916
Target Start/End: Complemental strand, 21927954 - 21927873
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| || ||||||||||||||||||| ||||| | |       |||||| ||||||||||||||||||||||||||||||    
T  21927954 ttactccctccgttcctttttaagtgtcacttttgca-gaaattttttgttcttatttaactgtcactttcaaagttcaatgc 21927873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 834 - 916
Target Start/End: Complemental strand, 37735397 - 37735316
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||| ||||||||||||| ||||| ||||  |||       |||||||||||||||||||||| ||||||||||||||    
T  37735397 ttactctctccgttcctttttaactgtcactttta-aagaaaaaatttgttcctatttaactgtcactgtcaaagttcaatgc 37735316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 1038107 - 1038143
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||||| |||||    
T  1038107 ttgttcctatttaactgtcactttcaaagtttaatgc 1038143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 1045013 - 1045049
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||||| |||||    
T  1045013 ttgttcctatttaactgtcactttcaaagtttaatgc 1045049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 19929679 - 19929643
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||| |||||||||||||||||||||    
T  19929679 ttgttcctatttaaccgtcactttcaaagttcaatgc 19929643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 32994682 - 32994646
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| ||||||||||||||||||||||||||||||    
T  32994682 ttgttcttatttaactgtcactttcaaagttcaatgc 32994646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 35255510 - 35255546
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||| ||||||||||||||||||||||    
T  35255510 ttgttcctatttaattgtcactttcaaagttcaatgc 35255546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 38648481 - 38648517
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||| ||||||||    
T  38648481 ttgttcctatttaactgtcactttcaaacttcaatgc 38648517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 40926956 - 40926920
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  40926956 ttgtttctatttaactgtcactttcaaagttcaatgc 40926920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 52749041 - 52749077
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||| ||||||||||||||||||||||||    
T  52749041 ttgttcctatttgactgtcactttcaaagttcaatgc 52749077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 880 - 915
Target Start/End: Complemental strand, 4101122 - 4101087
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    |||||||||||||||||||||||| |||||||||||    
T  4101122 ttgttcctatttaactgtcacttttaaagttcaatg 4101087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 883 - 914
Target Start/End: Complemental strand, 18034036 - 18034005
Alignment:
Q  883 ttcctatttaactgtcactttcaaagttcaat 914  Q
    ||||||||||||||||||||||||||||||||    
T  18034036 ttcctatttaactgtcactttcaaagttcaat 18034005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 4e-16; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 53600047 - 53599967
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||    
T  53600047 tactccctccgttcctttttaagtgtcatttttgga-gaaaaattttgttcctatttaactgtcactttcaaagttcaatgc 53599967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 834 - 916
Target Start/End: Complemental strand, 56576365 - 56576284
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| || ||||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||||    
T  56576365 ttactccctccgttcctttttaagtgtcacttttgga-gaaaaattttgttcctatttaactgtcactttcaaagttcaatgc 56576284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 3436328 - 3436248
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||||    
T  3436328 tactccctccgttcctttttaagtgtcacttttgga-gaaaaattttgttcctatttaactgtcactttcaaagttcaatgc 3436248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 835 - 916
Target Start/End: Original strand, 12252083 - 12252163
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||| |||       |||||||||||||||||||||||||||||||||||||    
T  12252083 tactccctccgttcctttttaagtgtcacttttg-aagaaaatttttgttcctatttaactgtcactttcaaagttcaatgc 12252163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 44014174 - 44014094
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || |||||||||||| |||||||||||||| |       |||||||||||||||||||||||||||||||||||||    
T  44014174 tactccctccgttcctttttatgtgtcatttttgga-gaaaaaatttgttcctatttaactgtcactttcaaagttcaatgc 44014094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 834 - 916
Target Start/End: Complemental strand, 19527470 - 19527389
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| || |||| |||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||||    
T  19527470 ttactccctccgtttctttttaagtgtcacttttgga-gaaaatttttgttcctatttaactgtcactttcaaagttcaatgc 19527389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 834 - 916
Target Start/End: Complemental strand, 38617569 - 38617488
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| || ||||||||||||||||||| ||||||| |       |||||||||||||||||||| ||||||||||||||||    
T  38617569 ttactccctccgttcctttttaagtgtcacttttgga-gaaatattttgttcctatttaactgtcattttcaaagttcaatgc 38617488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 834 - 916
Target Start/End: Complemental strand, 52677407 - 52677326
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| || ||||||||||||||||||| |||| || |       |||||||||||||||||||||||||||||||||||||    
T  52677407 ttactccctccgttcctttttaagtgtcacttttaga-gaaattttttgttcctatttaactgtcactttcaaagttcaatgc 52677326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 13629410 - 13629374
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  13629410 ttgttcctatttaactgtcactttcaaagttcaatgc 13629374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 21044964 - 21044928
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  21044964 ttgttcctatttaactgtcactttcaaagttcaatgc 21044928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 26620568 - 26620532
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  26620568 ttgttcctatttaactgtcactttcaaagttcaatgc 26620532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 27492386 - 27492422
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  27492386 ttgttcctatttaactgtcactttcaaagttcaatgc 27492422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 31862203 - 31862167
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  31862203 ttgttcctatttaactgtcactttcaaagttcaatgc 31862167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 37394420 - 37394340
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||| ||||||||| ||| ||||||||||||| |       ||||| |||||||||||||||||||||||||||||||    
T  37394420 tactctctccgttcctttctaaatgtcatttttgga-gaaattttttgtttctatttaactgtcactttcaaagttcaatgc 37394340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 46871948 - 46871984
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  46871948 ttgttcctatttaactgtcactttcaaagttcaatgc 46871984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 48782227 - 48782263
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  48782227 ttgttcctatttaactgtcactttcaaagttcaatgc 48782263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 834 - 914
Target Start/End: Complemental strand, 4201580 - 4201501
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaat 914  Q
    |||||| || ||||||||||||||||||  ||||| |||       |||||||||||||||||||||||||||||||||||    
T  4201580 ttactccctccgttcctttttaagtgtctcttttg-aagaaattttttgttcctatttaactgtcactttcaaagttcaat 4201501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 844 - 916
Target Start/End: Complemental strand, 16465034 - 16464963
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||| ||||| |||       ||||| |||||||||||||||||||||||||||||||    
T  16465034 cgttcctttttaagtgtcacttttg-aagaaattttttgttactatttaactgtcactttcaaagttcaatgc 16464963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 844 - 916
Target Start/End: Original strand, 55935099 - 55935170
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||| ||||||||| |       ||||| |||||||||||||||||||||||||||||||    
T  55935099 cgttcctttttaagtgttatttttgga-gaaattttttgtttctatttaactgtcactttcaaagttcaatgc 55935170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 845 - 916
Target Start/End: Original strand, 9834257 - 9834327
Alignment:
Q  845 gttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||| ||||||| |       |||||||||||||||||||||||| ||||||||||||    
T  9834257 gttcctttttaagtgtcacttttgga-gaaattttttgttcctatttaactgtcacttttaaagttcaatgc 9834327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 849 - 916
Target Start/End: Original strand, 34464274 - 34464340
Alignment:
Q  849 ctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||| |||       |||||||||||||||||||||||||| ||||||||||    
T  34464274 ctttttaagtgtcatttttg-aagaaaaaatttgttcctatttaactgtcactttcatagttcaatgc 34464340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 846 - 916
Target Start/End: Original strand, 29295348 - 29295417
Alignment:
Q  846 ttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||| ||||||| |       |||||||||||||||||| ||||||||||||||||||    
T  29295348 ttcctttttaagtgtcacttttgga-gaaaaattttgttcctatttaactgtgactttcaaagttcaatgc 29295417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 846 - 916
Target Start/End: Original strand, 47093806 - 47093875
Alignment:
Q  846 ttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||| ||||| |||       ||||||||||||||| |||||||||||||||||||||    
T  47093806 ttcctttttaagtgtcacttttg-aagaaattttttgttcctatttaaccgtcactttcaaagttcaatgc 47093875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 353993 - 354029
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||| ||||||||||||||||||||||    
T  353993 ttgttcctatttaattgtcactttcaaagttcaatgc 354029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 6195051 - 6195087
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||| |||||||||||||||    
T  6195051 ttgttcctatttaactgtcacattcaaagttcaatgc 6195087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 22828618 - 22828582
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  22828618 ttgtttctatttaactgtcactttcaaagttcaatgc 22828582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 23623712 - 23623676
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  23623712 ttgttactatttaactgtcactttcaaagttcaatgc 23623676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 30939182 - 30939218
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  30939182 ttgtttctatttaactgtcactttcaaagttcaatgc 30939218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 34361083 - 34361119
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||| ||||||||    
T  34361083 ttgttcctatttaactgtcactttcaaaattcaatgc 34361119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 36659644 - 36659608
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||| ||||||||||||||||||    
T  36659644 ttgttcctatttaactgttactttcaaagttcaatgc 36659608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 845 - 914
Target Start/End: Original strand, 36750170 - 36750238
Alignment:
Q  845 gttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaat 914  Q
    |||||||||||||||||| ||||| |||       ||||||||||||||||||||||||| |||||||||    
T  36750170 gttcctttttaagtgtcacttttg-aagaaattttttgttcctatttaactgtcactttcgaagttcaat 36750238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 39671352 - 39671388
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| ||||||||||||||||||||||||||||||    
T  39671352 ttgttcttatttaactgtcactttcaaagttcaatgc 39671388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 42133064 - 42133100
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||| |||||||||||||||||    
T  42133064 ttgttcctatttaactgtcgctttcaaagttcaatgc 42133100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 44069058 - 44069094
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||| ||||||||||||||||||||||    
T  44069058 ttgttcctatttaagtgtcactttcaaagttcaatgc 44069094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 47428556 - 47428592
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||| |||||||||||||||||    
T  47428556 ttgttcctatttaactgtcgctttcaaagttcaatgc 47428592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 880 - 915
Target Start/End: Complemental strand, 9220258 - 9220223
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    ||||||||| ||||||||||||||||||||||||||    
T  9220258 ttgttcctaattaactgtcactttcaaagttcaatg 9220223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 880 - 915
Target Start/End: Original strand, 40411970 - 40412005
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    |||||||||||||||||||| |||||||||||||||    
T  40411970 ttgttcctatttaactgtcattttcaaagttcaatg 40412005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 886 - 916
Target Start/End: Original strand, 42645340 - 42645370
Alignment:
Q  886 ctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||    
T  42645340 ctatttaactgtcactttcaaagttcaatgc 42645370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 43888010 - 43888044
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaat 914  Q
    |||||||||||||| ||||||||||||||||||||    
T  43888010 ttgttcctatttaattgtcactttcaaagttcaat 43888044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 886 - 916
Target Start/End: Complemental strand, 52258002 - 52257972
Alignment:
Q  886 ctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||    
T  52258002 ctatttaactgtcactttcaaagttcaatgc 52257972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 53691871 - 53691837
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaat 914  Q
    ||||||| |||||||||||||||||||||||||||    
T  53691871 ttgttccaatttaactgtcactttcaaagttcaat 53691837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 844 - 916
Target Start/End: Original strand, 2335422 - 2335493
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||    
T  2335422 cgttcctttttaagtgtcatttttgga-gaaattttttgttcctatttaactgtcactttcaaagttcaatgc 2335493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 8731087 - 8731007
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||| ||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||    
T  8731087 tactccctccgttcctttctaagtgtcatttttgga-gaaattttttgttcctatttaactgtcactttcaaagttcaatgc 8731007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 835 - 916
Target Start/End: Original strand, 23429889 - 23429969
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||||    
T  23429889 tactccctccgttcctttttaagtgtcacttttgga-gaaaatttttgttcctatttaactgtcactttcaaagttcaatgc 23429969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 835 - 916
Target Start/End: Original strand, 26062688 - 26062768
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||| |||||||||||||||||||||||| |||        ||||||||||||||||||||||||| |||||||||||    
T  26062688 tactctctccgttcctttttaagtgtcatttttagaa-aatttttttgttcctatttaactgtcactttcgaagttcaatgc 26062768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 39303776 - 39303696
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||||||||||| |       ||||||||||||||||||||||||| |||||||||||    
T  39303776 tactccctccgttcctttttaagtgtcatttttgga-gaaattttttgttcctatttaactgtcactttcgaagttcaatgc 39303696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 844 - 916
Target Start/End: Original strand, 7483733 - 7483804
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||| |       |||||||||||| ||||||||||||||||||||||||    
T  7483733 cgttcctttttaagtgtcatttttgga-gaaattttttgttcctatttcactgtcactttcaaagttcaatgc 7483804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 834 - 914
Target Start/End: Complemental strand, 27518968 - 27518889
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaat 914  Q
    ||||||||| ||||||||||||||||||  ||||| |||       |||||||||||||||||||||||||||||||||||    
T  27518968 ttactctctccgttcctttttaagtgtctcttttg-aagaaattttttgttcctatttaactgtcactttcaaagttcaat 27518889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 845 - 916
Target Start/End: Original strand, 6750605 - 6750675
Alignment:
Q  845 gttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||| ||||||||||||| |       |||||||||||||||||||||||||||||||||||||    
T  6750605 gttcctttttaattgtcatttttgga-gaaattttttgttcctatttaactgtcactttcaaagttcaatgc 6750675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 845 - 916
Target Start/End: Original strand, 6757396 - 6757466
Alignment:
Q  845 gttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||| ||||||||||||| |       |||||||||||||||||||||||||||||||||||||    
T  6757396 gttcctttttaattgtcatttttgga-gaaattttttgttcctatttaactgtcactttcaaagttcaatgc 6757466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 835 - 914
Target Start/End: Complemental strand, 14228582 - 14228503
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaat 914  Q
    |||||||| ||||||||||||||||||| |||||||         || ||||||||||||||||||||||||||||||||    
T  14228582 tactctctacgttcctttttaagtgtcacttttggagatttttttttcttcctatttaactgtcactttcaaagttcaat 14228503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 3720704 - 3720740
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  3720704 ttgttcctatttaactgtcactttcaaagttcaatgc 3720740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 4057312 - 4057348
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  4057312 ttgttcctatttaactgtcactttcaaagttcaatgc 4057348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 835 - 916
Target Start/End: Original strand, 14263524 - 14263604
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||||| |       |||||||||||||||||||||||| ||||||||||||    
T  14263524 tactccctccgttcctttttaagtgtcacttttgga-gaaaatttttgttcctatttaactgtcactttaaaagttcaatgc 14263604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 17718527 - 17718563
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  17718527 ttgttcctatttaactgtcactttcaaagttcaatgc 17718563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 35296068 - 35296104
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  35296068 ttgttcctatttaactgtcactttcaaagttcaatgc 35296104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 38483008 - 38482972
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  38483008 ttgttcctatttaactgtcactttcaaagttcaatgc 38482972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 844 - 916
Target Start/End: Original strand, 9954638 - 9954709
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||| ||||||| |       | |||||||||||||||||||||||||||||||||||    
T  9954638 cgttcctttttaagtgtcacttttgga-gaaaaatttagttcctatttaactgtcactttcaaagttcaatgc 9954709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 844 - 916
Target Start/End: Original strand, 13327768 - 13327839
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||| ||||||| |       ||||| |||||||||||||||||||||||||||||||    
T  13327768 cgttcctttttaagtgtcacttttgga-gaaaaattttgtttctatttaactgtcactttcaaagttcaatgc 13327839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 880 - 915
Target Start/End: Original strand, 40228319 - 40228354
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    ||||||||||||||||||||||||||||||||||||    
T  40228319 ttgttcctatttaactgtcactttcaaagttcaatg 40228354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 834 - 916
Target Start/End: Complemental strand, 14061410 - 14061329
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||| |||||||||||||||||||||||| |||        ||||| || |||||||||||||||||||| |||||||    
T  14061410 ttactctctccgttcctttttaagtgtcattttttgaa-aaaaattttgtttctgtttaactgtcactttcaaaggtcaatgc 14061329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 844 - 914
Target Start/End: Complemental strand, 16701144 - 16701075
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaat 914  Q
    ||||||||||||||||||| ||||||| |       |||||||||||||||||||||||| ||||||||||    
T  16701144 cgttcctttttaagtgtcacttttgga-gaaaaattttgttcctatttaactgtcacttttaaagttcaat 16701075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 834 - 916
Target Start/End: Complemental strand, 21652007 - 21651926
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||| |||||||||||||||||| |||||| |||       ||||||||||||||| | |||||| ||||||||||||    
T  21652007 ttactctctccgttcctttttaagtgtcttttttg-aagaaattttttgttcctatttaaccgccacttttaaagttcaatgc 21651926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 883 - 916
Target Start/End: Complemental strand, 40521457 - 40521424
Alignment:
Q  883 ttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||||||||    
T  40521457 ttcctatttaactgtcactttcaaagttcaatgc 40521424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 883 - 916
Target Start/End: Complemental strand, 43642202 - 43642169
Alignment:
Q  883 ttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||||||||    
T  43642202 ttcctatttaactgtcactttcaaagttcaatgc 43642169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 883 - 916
Target Start/End: Complemental strand, 45281590 - 45281557
Alignment:
Q  883 ttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||||||||    
T  45281590 ttcctatttaactgtcactttcaaagttcaatgc 45281557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 11707701 - 11707665
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  11707701 ttgtttctatttaactgtcactttcaaagttcaatgc 11707665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 13173953 - 13173989
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||| ||||||||||||    
T  13173953 ttgttcctatttaactgtcacttttaaagttcaatgc 13173989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 834 - 915
Target Start/End: Original strand, 15596323 - 15596403
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    |||||| || ||||||||||||||||||  ||||||| |       ||||| ||||||||||||||||||||||||||||||    
T  15596323 ttactccctccgttcctttttaagtgtctcttttgga-gaatttttttgtttctatttaactgtcactttcaaagttcaatg 15596403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 18291488 - 18291524
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  18291488 ttgttgctatttaactgtcactttcaaagttcaatgc 18291524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 33935276 - 33935240
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||||| |||||    
T  33935276 ttgttcctatttaactgtcactttcaaagtttaatgc 33935240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 34046875 - 34046911
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  34046875 ttgtttctatttaactgtcactttcaaagttcaatgc 34046911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 34981853 - 34981889
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||| |||||||||||||||||||||||||||    
T  34981853 ttgttcctacttaactgtcactttcaaagttcaatgc 34981889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 35052077 - 35052113
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| ||||||||||||||||||||||||||||||    
T  35052077 ttgttcatatttaactgtcactttcaaagttcaatgc 35052113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 40604067 - 40604031
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||| ||||||||||||||||    
T  40604067 ttgttcctatttaactgtcattttcaaagttcaatgc 40604031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 885 - 916
Target Start/End: Complemental strand, 2456321 - 2456290
Alignment:
Q  885 cctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||||||    
T  2456321 cctatttaactgtcactttcaaagttcaatgc 2456290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 886 - 916
Target Start/End: Original strand, 8672332 - 8672362
Alignment:
Q  886 ctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||    
T  8672332 ctatttaactgtcactttcaaagttcaatgc 8672362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 883 - 916
Target Start/End: Complemental strand, 15647612 - 15647579
Alignment:
Q  883 ttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| ||||||||||||||||||||||||||||    
T  15647612 ttcctttttaactgtcactttcaaagttcaatgc 15647579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 832 - 916
Target Start/End: Original strand, 8176413 - 8176496
Alignment:
Q  832 agttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||| |||||||||||||||||||||  ||||| |||       |||||||||||||||||||||||||||||||||||||    
T  8176413 agttactcccttcgttcctttttaagtgtctcttttg-aagaaattttttgttcctatttaactgtcactttcaaagttcaatgc 8176496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 835 - 916
Target Start/End: Original strand, 3849045 - 3849125
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||||    
T  3849045 tactccctccgttcctttttaagtgtcacttttgga-gaaaaattttgttcctatttaactgtcactttcaaagttcaatgc 3849125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 834 - 914
Target Start/End: Complemental strand, 23923975 - 23923896
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaat 914  Q
    |||||| || ||||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||    
T  23923975 ttactccctccgttcctttttaagtgtcacttttgga-gagattttttgttcctatttaactgtcactttcaaagttcaat 23923896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 844 - 916
Target Start/End: Original strand, 34378848 - 34378919
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||||||||||    
T  34378848 cgttcctttttaagtgtcatttttggaa-aaaaaatttgtttctatttaactgtcactttcaaagttcaatgc 34378919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 834 - 916
Target Start/End: Complemental strand, 9838384 - 9838303
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| || ||||||||||||||||||| ||||||| |       ||||||| |||||||||||||||||||||||||||||    
T  9838384 ttactccctccgttcctttttaagtgtcacttttgga-gaaattttttgttccaatttaactgtcactttcaaagttcaatgc 9838303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 835 - 916
Target Start/End: Original strand, 373703 - 373783
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||| ||||| ||||||||||||| ||||||| |       |||||| ||||||||||||||||||||||||||||||    
T  373703 tactctctccgttcatttttaagtgtcacttttgga-gaaattttttgttcatatttaactgtcactttcaaagttcaatgc 373783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 835 - 916
Target Start/End: Original strand, 17193138 - 17193218
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||||| |       |||||||||||||| ||||||||||||||||||||||    
T  17193138 tactccctccgttcctttttaagtgtcacttttgga-gaaattttttgttcctatttaaatgtcactttcaaagttcaatgc 17193218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 24356271 - 24356235
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  24356271 ttgttcctatttaactgtcactttcaaagttcaatgc 24356235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 33260724 - 33260760
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  33260724 ttgttcctatttaactgtcactttcaaagttcaatgc 33260760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 835 - 915
Target Start/End: Original strand, 30388701 - 30388780
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    ||||| || ||||||||||||||||||| ||||| |||       ||||||||| ||||||||||||||||||||||||||    
T  30388701 tactccctccgttcctttttaagtgtcacttttg-aagaaaatttttgttcctaattaactgtcactttcaaagttcaatg 30388780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 883 - 916
Target Start/End: Original strand, 24663406 - 24663439
Alignment:
Q  883 ttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||||||||    
T  24663406 ttcctatttaactgtcactttcaaagttcaatgc 24663439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 834 - 916
Target Start/End: Complemental strand, 26470985 - 26470904
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| || ||||||||||||||||||  ||||| |||       |||||||||||||| ||||||||||||||||||||||    
T  26470985 ttactccctccgttcctttttaagtgtctcttttg-aagaaattttttgttcctatttaattgtcactttcaaagttcaatgc 26470904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 17251473 - 17251437
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||| |||||||||||||||||||||    
T  17251473 ttgttcctatttaaccgtcactttcaaagttcaatgc 17251437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 22050073 - 22050109
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  22050073 ttgtttctatttaactgtcactttcaaagttcaatgc 22050109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 22784885 - 22784849
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  22784885 ttgtttctatttaactgtcactttcaaagttcaatgc 22784849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 880 - 915
Target Start/End: Original strand, 12732200 - 12732235
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    ||||||||||||||||||||||||||||||| ||||    
T  12732200 ttgttcctatttaactgtcactttcaaagtttaatg 12732235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 886 - 916
Target Start/End: Complemental strand, 32359646 - 32359616
Alignment:
Q  886 ctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||    
T  32359646 ctatttaactgtcactttcaaagttcaatgc 32359616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 887 - 916
Target Start/End: Complemental strand, 17124193 - 17124164
Alignment:
Q  887 tatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||||    
T  17124193 tatttaactgtcactttcaaagttcaatgc 17124164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 887 - 916
Target Start/End: Complemental strand, 31244959 - 31244930
Alignment:
Q  887 tatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||||    
T  31244959 tatttaactgtcactttcaaagttcaatgc 31244930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 844 - 916
Target Start/End: Original strand, 2012850 - 2012921
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||    
T  2012850 cgttcctttttaagtgtcatttttgga-gaaattttttgttcctatttaactgtcactttcaaagttcaatgc 2012921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 835 - 916
Target Start/End: Original strand, 10812179 - 10812259
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||||    
T  10812179 tactccctccgttcctttttaagtgtcacttttgga-gaaaaattttgttcctatttaactgtcactttcaaagttcaatgc 10812259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 834 - 914
Target Start/End: Complemental strand, 14296021 - 14295942
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaat 914  Q
    |||||| || ||||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||    
T  14296021 ttactccctccgttcctttttaagtgtcacttttgga-gaaaatttttgttcctatttaactgtcactttcaaagttcaat 14295942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 844 - 916
Target Start/End: Original strand, 36375560 - 36375631
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||| |       |||||||||||| ||||||||||||||||||||||||    
T  36375560 cgttcctttttaagtgtcatttttgga-gaaaaattttgttcctatttgactgtcactttcaaagttcaatgc 36375631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 830 - 914
Target Start/End: Original strand, 37093426 - 37093508
Alignment:
Q  830 ttagttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaat 914  Q
    |||||||||| || ||||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||    
T  37093426 ttagttactc-ctccgttcctttttaagtgtcacttttgga-gaaattttttgttcctatttaactgtcactttcaaagttcaat 37093508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 850 - 916
Target Start/End: Complemental strand, 15677539 - 15677474
Alignment:
Q  850 tttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||    
T  15677539 tttttaagtgtcatttttgga-gaaaaattttgttcctatttaactgtcactttcaaagttcaatgc 15677474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 834 - 916
Target Start/End: Complemental strand, 31025204 - 31025123
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| || ||||||||||||||||||||||| ||| |       ||||| |||||||||||||||||||||||||||||||    
T  31025204 ttactccctccgttcctttttaagtgtcattttggga-gaaattttttgtttctatttaactgtcactttcaaagttcaatgc 31025123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 479192 - 479156
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  479192 ttgttcctatttaactgtcactttcaaagttcaatgc 479156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 6013499 - 6013535
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  6013499 ttgttcctatttaactgtcactttcaaagttcaatgc 6013535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 15893843 - 15893763
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||||||        |||||||||||||||||||| ||||||||||||||||    
T  15893843 tactccctccgttcctttttaagtgtcaattttggaa-aataaatttgttcctatttaactgtcattttcaaagttcaatgc 15893763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 25187346 - 25187310
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  25187346 ttgttcctatttaactgtcactttcaaagttcaatgc 25187310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 835 - 916
Target Start/End: Original strand, 26342560 - 26342640
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||||| |       | |||||||||||||||||||||||||||||||||||    
T  26342560 tactccctccgttcctttttaagtgtcacttttgga-gaaatttttggttcctatttaactgtcactttcaaagttcaatgc 26342640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 32854999 - 32854963
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  32854999 ttgttcctatttaactgtcactttcaaagttcaatgc 32854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 835 - 916
Target Start/End: Original strand, 34357158 - 34357238
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||||| |       |||||||||||||| ||||||||||||||||||||||    
T  34357158 tactccctccgttcctttttaagtgtcacttttgga-gaaaaaatttgttcctatttaattgtcactttcaaagttcaatgc 34357238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 41885649 - 41885685
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  41885649 ttgttcctatttaactgtcactttcaaagttcaatgc 41885685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 43077316 - 43077352
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  43077316 ttgttcctatttaactgtcactttcaaagttcaatgc 43077352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 844 - 916
Target Start/End: Complemental strand, 28145826 - 28145755
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||| ||||||| |       || ||||||||||||||||||||||||||||||||||    
T  28145826 cgttcctttttaagtgtcacttttgga-gaaaatttttcttcctatttaactgtcactttcaaagttcaatgc 28145755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 882 - 916
Target Start/End: Original strand, 1395591 - 1395625
Alignment:
Q  882 gttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||    
T  1395591 gttcctatttaactgtcactttcaaagttcaatgc 1395625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 835 - 914
Target Start/End: Original strand, 13753935 - 13754013
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaat 914  Q
    ||||| |||||||||||||||||||||  ||||||| |       ||||||| |||||||||||||||||||||||||||    
T  13753935 tactcccttcgttcctttttaagtgtctcttttgga-gaacatttttgttccaatttaactgtcactttcaaagttcaat 13754013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 3363608 - 3363644
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| ||||||||||||||||||||||||||||||    
T  3363608 ttgttcttatttaactgtcactttcaaagttcaatgc 3363644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 4883627 - 4883663
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||| ||||||||||||||||    
T  4883627 ttgttcctatttaactgtcattttcaaagttcaatgc 4883663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 8443715 - 8443751
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||| ||||||||||||||||||||||||||||||||    
T  8443715 ttgtccctatttaactgtcactttcaaagttcaatgc 8443751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 9369998 - 9370034
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  9369998 ttgtttctatttaactgtcactttcaaagttcaatgc 9370034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 10263780 - 10263816
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||| ||||||||    
T  10263780 ttgttcctatttaactgtcactttcaaatttcaatgc 10263816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 11222535 - 11222499
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  11222535 ttgtttctatttaactgtcactttcaaagttcaatgc 11222499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 11560266 - 11560230
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  11560266 ttgtttctatttaactgtcactttcaaagttcaatgc 11560230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 13001130 - 13001094
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||| |||||||||||||||||||||||||||||    
T  13001130 ttgttccaatttaactgtcactttcaaagttcaatgc 13001094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 13849934 - 13849898
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| ||||||||||||||||||||||||||||||    
T  13849934 ttgttcttatttaactgtcactttcaaagttcaatgc 13849898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 36405061 - 36405025
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  36405061 ttgtttctatttaactgtcactttcaaagttcaatgc 36405025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 44360458 - 44360494
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  44360458 ttgtttctatttaactgtcactttcaaagttcaatgc 44360494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 880 - 915
Target Start/End: Original strand, 13215417 - 13215452
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    ||||||||||||||||||||||||| ||||||||||    
T  13215417 ttgttcctatttaactgtcactttcgaagttcaatg 13215452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 834 - 914
Target Start/End: Original strand, 14288410 - 14288489
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaat 914  Q
    |||||| || |||| |||||||||||||| ||||||| |       |||||||||||||||||||| ||||||||||||||    
T  14288410 ttactccctccgtttctttttaagtgtcacttttgga-gaaaatttttgttcctatttaactgtcattttcaaagttcaat 14288489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 886 - 916
Target Start/End: Complemental strand, 37116806 - 37116776
Alignment:
Q  886 ctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||    
T  37116806 ctatttaactgtcactttcaaagttcaatgc 37116776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 694 - 735
Target Start/End: Complemental strand, 9431070 - 9431029
Alignment:
Q  694 ttcaatacttttcacttttgctctcttattgagttgaccgtt 735  Q
    |||||||||||| ||||||||||||||||||| |||| ||||    
T  9431070 ttcaatactttttacttttgctctcttattgatttgaacgtt 9431029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 883 - 916
Target Start/End: Complemental strand, 34309266 - 34309233
Alignment:
Q  883 ttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||| |||||||||||    
T  34309266 ttcctatttaactgtcactttcgaagttcaatgc 34309233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 17896786 - 17896706
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||||    
T  17896786 tactccctccgttcctttttaagtgtcacttttgga-gaaaaattttgttcctatttaactgtcactttcaaagttcaatgc 17896706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 843 - 916
Target Start/End: Original strand, 41891257 - 41891330
Alignment:
Q  843 tcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||| |||||||         |||||||||||||||||||||||||||||||||||||    
T  41891257 tcgttcctttttaagtgtcacttttggagaaaaaaatttgttcctatttaactgtcactttcaaagttcaatgc 41891330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 844 - 916
Target Start/End: Complemental strand, 30866990 - 30866919
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| ||||||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||    
T  30866990 cgttcttttttaagtgtcatttttgga-gaaattttttgttcctatttaactgtcactttcaaagttcaatgc 30866919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 834 - 916
Target Start/End: Original strand, 18470286 - 18470367
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| || ||||||||||||||||||| ||||||| |       |||||| ||||||||||||||||||||||||||||||    
T  18470286 ttactccctccgttcctttttaagtgtcacttttgga-gaaattttttgttcttatttaactgtcactttcaaagttcaatgc 18470367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 8264971 - 8265007
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  8264971 ttgttcctatttaactgtcactttcaaagttcaatgc 8265007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 31430583 - 31430619
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  31430583 ttgttcctatttaactgtcactttcaaagttcaatgc 31430619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 33100052 - 33100016
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  33100052 ttgttcctatttaactgtcactttcaaagttcaatgc 33100016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 33173831 - 33173867
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  33173831 ttgttcctatttaactgtcactttcaaagttcaatgc 33173867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 42842085 - 42842049
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  42842085 ttgttcctatttaactgtcactttcaaagttcaatgc 42842049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 880 - 915
Target Start/End: Complemental strand, 32528547 - 32528512
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    ||||||||||||||||||||||||||||||||||||    
T  32528547 ttgttcctatttaactgtcactttcaaagttcaatg 32528512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 881 - 916
Target Start/End: Complemental strand, 33921992 - 33921957
Alignment:
Q  881 tgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||||||||||    
T  33921992 tgttcctatttaactgtcactttcaaagttcaatgc 33921957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 845 - 916
Target Start/End: Complemental strand, 2408914 - 2408844
Alignment:
Q  845 gttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||| ||||||| |       |||||| ||||||||||||||||||||||||||||||    
T  2408914 gttcctttttaagtgtcacttttgga-gaaaaaatttgttcttatttaactgtcactttcaaagttcaatgc 2408844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 883 - 916
Target Start/End: Complemental strand, 29497750 - 29497717
Alignment:
Q  883 ttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||||||||    
T  29497750 ttcctatttaactgtcactttcaaagttcaatgc 29497717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 1553539 - 1553575
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||| |||||||||||    
T  1553539 ttgttcctatttaactgtcactttcgaagttcaatgc 1553575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 7477417 - 7477381
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||| ||||||||||||||||||    
T  7477417 ttgttcctatttaactgttactttcaaagttcaatgc 7477381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 10227280 - 10227316
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||| ||||||||    
T  10227280 ttgttcctatttaactgtcactttcaaaattcaatgc 10227316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 13431350 - 13431314
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||| ||||||||    
T  13431350 ttgttcctatttaactgtcactttcaaaattcaatgc 13431314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 20035072 - 20035108
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||| |||||||||||||||||||    
T  20035072 ttgttcctatttaactggcactttcaaagttcaatgc 20035108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 20045483 - 20045519
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||| |||||||||||||||||||    
T  20045483 ttgttcctatttaactggcactttcaaagttcaatgc 20045519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 24283606 - 24283642
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24283606 ttgttcctatttacctgtcactttcaaagttcaatgc 24283642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 884 - 916
Target Start/End: Complemental strand, 26632395 - 26632363
Alignment:
Q  884 tcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||    
T  26632395 tcctatttaactgtcactttcaaagttcaatgc 26632363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 34368878 - 34368842
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| ||||||||||||||||||||||||||||||    
T  34368878 ttgttcatatttaactgtcactttcaaagttcaatgc 34368842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 46286064 - 46286028
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| ||||||||||||||||||||||||||||||    
T  46286064 ttgttcttatttaactgtcactttcaaagttcaatgc 46286028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 881 - 916
Target Start/End: Complemental strand, 17354244 - 17354209
Alignment:
Q  881 tgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| ||||||||||||||||||||||||||||||    
T  17354244 tgttcatatttaactgtcactttcaaagttcaatgc 17354209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 349 - 399
Target Start/End: Original strand, 21311692 - 21311742
Alignment:
Q  349 gaaaattgattttctaattttcaaaagttcctaataacacataaaaatgtc 399  Q
    |||||||| |||||| ||||||  |||||||||||||||||| ||||||||    
T  21311692 gaaaattgtttttctgattttcggaagttcctaataacacatgaaaatgtc 21311742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 886 - 916
Target Start/End: Complemental strand, 36648218 - 36648188
Alignment:
Q  886 ctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||    
T  36648218 ctatttaactgtcactttcaaagttcaatgc 36648188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 887 - 916
Target Start/End: Complemental strand, 37354071 - 37354042
Alignment:
Q  887 tatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||||    
T  37354071 tatttaactgtcactttcaaagttcaatgc 37354042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 4175737 - 4175657
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||||    
T  4175737 tactccctccgttcctttttaagtgtcacttttgga-gaaaatttttgttcctatttaactgtcactttcaaagttcaatgc 4175657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 42394385 - 42394305
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||| |||       |||||||||||||||||||||||||||||||||||||    
T  42394385 tactccctccgttcctttttaagtgtcacttttg-aagaaattttttgttcctatttaactgtcactttcaaagttcaatgc 42394305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 834 - 916
Target Start/End: Complemental strand, 12784700 - 12784619
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| || |||| |||||||| ||||||||||||| |       |||||||||||||||||||||||||||||||||||||    
T  12784700 ttactccctccgtttctttttaactgtcatttttgga-gaaaaattttgttcctatttaactgtcactttcaaagttcaatgc 12784619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 834 - 916
Target Start/End: Original strand, 38702102 - 38702183
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| || ||||||||||||||||||| ||||||| |       ||||||||||||||||||||||||| |||||||||||    
T  38702102 ttactccctccgttcctttttaagtgtcaattttgga-gaaattttttgttcctatttaactgtcactttcgaagttcaatgc 38702183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 1297995 - 1297915
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||| ||||| ||||||||||||| ||||||| |       |||||||||||||||||||||||||||| ||||||||    
T  1297995 tactctctccgttcttttttaagtgtcacttttgga-gaaaatttttgttcctatttaactgtcactttcaaaattcaatgc 1297915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 5144255 - 5144175
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||| ||||||||||||| |       |||||||||||||| ||||||||||||||||||||||    
T  5144255 tactccctccgttcctttttaattgtcatttttgga-gaaattttttgttcctatttaagtgtcactttcaaagttcaatgc 5144175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 9076077 - 9076113
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  9076077 ttgttcctatttaactgtcactttcaaagttcaatgc 9076113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 12664864 - 12664900
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  12664864 ttgttcctatttaactgtcactttcaaagttcaatgc 12664900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 21606471 - 21606435
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  21606471 ttgttcctatttaactgtcactttcaaagttcaatgc 21606435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 834 - 915
Target Start/End: Complemental strand, 28024517 - 28024437
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    |||||||||  |||||||||||||||||  ||||||| |       ||||||||||||||||||||||||||||||||||||    
T  28024517 ttactctctctgttcctttttaagtgtctcttttgga-gaaaaattttgttcctatttaactgtcactttcaaagttcaatg 28024437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 32440125 - 32440089
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  32440125 ttgttcctatttaactgtcactttcaaagttcaatgc 32440089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 38017490 - 38017454
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  38017490 ttgttcctatttaactgtcactttcaaagttcaatgc 38017454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 38297874 - 38297793
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| |||||||         |||||| ||||||||||||||||||||||||||||||    
T  38297874 tactccctccgttcctttttaagtgtcacttttggagaaatttttttgttcatatttaactgtcactttcaaagttcaatgc 38297793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 38363197 - 38363233
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  38363197 ttgttcctatttaactgtcactttcaaagttcaatgc 38363233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 835 - 916
Target Start/End: Original strand, 39073006 - 39073086
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||||||        |||||||||||||||||||| ||||||||||||||||    
T  39073006 tactccctccgttcctttttaagtgtcaattttggaa-aaaaaatttgttcctatttaactgtcattttcaaagttcaatgc 39073086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 844 - 916
Target Start/End: Original strand, 6007854 - 6007925
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||| ||||||| |       ||||| |||||||||||||||||||||||||||||||    
T  6007854 cgttcctttttaagtgtcacttttgga-gaaattttttgtttctatttaactgtcactttcaaagttcaatgc 6007925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 844 - 916
Target Start/End: Original strand, 18465672 - 18465743
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||| ||||||| |       ||||||||||||||||| |||||||||||||||||||    
T  18465672 cgttcctttttaagtgtcacttttgga-gaaaatttttgttcctatttaactgccactttcaaagttcaatgc 18465743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 6754392 - 6754358
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaat 914  Q
    |||||||||||||||||||||||||||||||||||    
T  6754392 ttgttcctatttaactgtcactttcaaagttcaat 6754358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 12870112 - 12870078
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaat 914  Q
    |||||||||||||||||||||||||||||||||||    
T  12870112 ttgttcctatttaactgtcactttcaaagttcaat 12870078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 845 - 916
Target Start/End: Complemental strand, 26854341 - 26854271
Alignment:
Q  845 gttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||| ||||||| |       ||||||||||||||||||||||| |||||||||||||    
T  26854341 gttcctttttaagtgtcacttttgga-gaaattttttgttcctatttaactgtcacttccaaagttcaatgc 26854271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 846 - 916
Target Start/End: Original strand, 18794756 - 18794825
Alignment:
Q  846 ttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||| ||||||| |       ||||| |||||||||||||||||||||||||||||||    
T  18794756 ttcctttttaagtgtcacttttgga-gaaattttttgtttctatttaactgtcactttcaaagttcaatgc 18794825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 834 - 916
Target Start/End: Complemental strand, 28463643 - 28463562
Alignment:
Q  834 ttactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| || ||||||||||||||||||| ||||||| |       |||||  ||||||||||||||||||||||||||||||    
T  28463643 ttactccctccgttcctttttaagtgtcacttttgga-gaaattttttgtttttatttaactgtcactttcaaagttcaatgc 28463562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 1088146 - 1088110
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| ||||||||||||||||||||||||||||||    
T  1088146 ttgttcttatttaactgtcactttcaaagttcaatgc 1088110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 4694770 - 4694806
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| ||||||||||||||||||||||||||||||    
T  4694770 ttgttcatatttaactgtcactttcaaagttcaatgc 4694806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 883 - 915
Target Start/End: Complemental strand, 4962396 - 4962364
Alignment:
Q  883 ttcctatttaactgtcactttcaaagttcaatg 915  Q
    |||||||||||||||||||||||||||||||||    
T  4962396 ttcctatttaactgtcactttcaaagttcaatg 4962364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 4985388 - 4985352
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  4985388 ttgtttctatttaactgtcactttcaaagttcaatgc 4985352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 26906497 - 26906533
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  26906497 ttgtttctatttaactgtcactttcaaagttcaatgc 26906533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 34261318 - 34261354
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  34261318 ttgtttctatttaactgtcactttcaaagttcaatgc 34261354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 36239464 - 36239500
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  36239464 ttgtttctatttaactgtcactttcaaagttcaatgc 36239500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 38160298 - 38160334
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||| |||||||||||||||||    
T  38160298 ttgttcctatttaactgtcgctttcaaagttcaatgc 38160334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 39894022 - 39893986
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||| ||||||||||||    
T  39894022 ttgttcctatttaactgtcacttttaaagttcaatgc 39893986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 40209181 - 40209145
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||| ||||||||    
T  40209181 ttgttcctatttaactgtcactttcaaaattcaatgc 40209145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 42911556 - 42911592
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  42911556 ttgttactatttaactgtcactttcaaagttcaatgc 42911592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 40198794 - 40198828
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaat 914  Q
    ||||| |||||||||||||||||||||||||||||    
T  40198794 ttgttactatttaactgtcactttcaaagttcaat 40198828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 887 - 916
Target Start/End: Complemental strand, 24075044 - 24075015
Alignment:
Q  887 tatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||||    
T  24075044 tatttaactgtcactttcaaagttcaatgc 24075015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 887 - 916
Target Start/End: Original strand, 32388999 - 32389028
Alignment:
Q  887 tatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||||    
T  32388999 tatttaactgtcactttcaaagttcaatgc 32389028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 53745547 - 53745467
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||||    
T  53745547 tactccctccgttcctttttaagtgtcacttttgga-gaaattttttgttcctatttaactgtcactttcaaagttcaatgc 53745467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 844 - 916
Target Start/End: Original strand, 43554379 - 43554450
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||||    
T  43554379 cgttcctttttaagtgtcacttttgga-gaaaatttttgttcctatttaactgtcactttcaaagttcaatgc 43554450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 846 - 916
Target Start/End: Original strand, 54106254 - 54106323
Alignment:
Q  846 ttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||| ||||| |||       |||||||||||||||||||||||||||||||||||||    
T  54106254 ttcctttttaagtgtcacttttg-aagaaaaattttgttcctatttaactgtcactttcaaagttcaatgc 54106323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 2154261 - 2154225
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  2154261 ttgttcctatttaactgtcactttcaaagttcaatgc 2154225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 3643417 - 3643381
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  3643417 ttgttcctatttaactgtcactttcaaagttcaatgc 3643381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 19550270 - 19550306
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  19550270 ttgttcctatttaactgtcactttcaaagttcaatgc 19550306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 20848941 - 20848905
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  20848941 ttgttcctatttaactgtcactttcaaagttcaatgc 20848905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 27039828 - 27039792
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  27039828 ttgttcctatttaactgtcactttcaaagttcaatgc 27039792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 33874768 - 33874732
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  33874768 ttgttcctatttaactgtcactttcaaagttcaatgc 33874732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 47104377 - 47104341
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  47104377 ttgttcctatttaactgtcactttcaaagttcaatgc 47104341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 51219306 - 51219270
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  51219306 ttgttcctatttaactgtcactttcaaagttcaatgc 51219270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 52175744 - 52175780
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  52175744 ttgttcctatttaactgtcactttcaaagttcaatgc 52175780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 844 - 916
Target Start/End: Original strand, 20105181 - 20105252
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||| ||||||| |       |||||||| ||||||||||||||||||||||||||||    
T  20105181 cgttcctttttaagtgtcacttttgga-gaaaatttttgttcctctttaactgtcactttcaaagttcaatgc 20105252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 880 - 915
Target Start/End: Complemental strand, 32854170 - 32854135
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    ||||||||||||||||||||||||||||||||||||    
T  32854170 ttgttcctatttaactgtcactttcaaagttcaatg 32854135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 844 - 916
Target Start/End: Original strand, 50091934 - 50092005
Alignment:
Q  844 cgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||| ||||||||| |       ||||||||| |||||||||||||||||||||||||||    
T  50091934 cgttcctttttaagtgttatttttgga-gaaactttttgttcctacttaactgtcactttcaaagttcaatgc 50092005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 17102778 - 17102812
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaat 914  Q
    |||||||||||||||||||||||||||||||||||    
T  17102778 ttgttcctatttaactgtcactttcaaagttcaat 17102812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 845 - 916
Target Start/End: Complemental strand, 54898342 - 54898272
Alignment:
Q  845 gttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||| ||||||| |       |||||||||||||||| ||||||||||||||||||||    
T  54898342 gttcctttttaagtgtcacttttgga-gaaaaattttgttcctatttaactatcactttcaaagttcaatgc 54898272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 835 - 916
Target Start/End: Original strand, 790530 - 790610
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||||| |        |||| |||||||||||||||||||||||||||||||    
T  790530 tactccctccgttcctttttaagtgtcacttttgga-gaaaatttatgtttctatttaactgtcactttcaaagttcaatgc 790610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 5244157 - 5244121
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||| ||||||||||||||||||||    
T  5244157 ttgttcctatttaactatcactttcaaagttcaatgc 5244121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 7328479 - 7328515
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||| ||||||||||||||||||||    
T  7328479 ttgttcctatttaactatcactttcaaagttcaatgc 7328515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 27028237 - 27028201
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  27028237 ttgtttctatttaactgtcactttcaaagttcaatgc 27028201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 27484008 - 27483972
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||| ||||||||||||    
T  27484008 ttgttcctatttaactgtcacttttaaagttcaatgc 27483972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 33491361 - 33491325
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||| ||||||||||||||||||    
T  33491361 ttgttcctatttaactgttactttcaaagttcaatgc 33491325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 36234391 - 36234427
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  36234391 ttgtttctatttaactgtcactttcaaagttcaatgc 36234427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 42515394 - 42515358
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  42515394 ttgtttctatttaactgtcactttcaaagttcaatgc 42515358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 47070079 - 47070043
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||| |||||||||||||||||||||    
T  47070079 ttgttcctatttaaccgtcactttcaaagttcaatgc 47070043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 51244648 - 51244684
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| ||||||||||||||||||||||||||||||    
T  51244648 ttgttcttatttaactgtcactttcaaagttcaatgc 51244684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 52173771 - 52173807
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| ||||||||||||||||||||||||||||||    
T  52173771 ttgttcatatttaactgtcactttcaaagttcaatgc 52173807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 54334405 - 54334369
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| |||||||||||||||||||||||||||||||    
T  54334405 ttgtttctatttaactgtcactttcaaagttcaatgc 54334369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 880 - 915
Target Start/End: Complemental strand, 51697786 - 51697751
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    ||||| ||||||||||||||||||||||||||||||    
T  51697786 ttgtttctatttaactgtcactttcaaagttcaatg 51697751  T

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Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Complemental strand, 45513837 - 45513803
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaat 914  Q
    |||||||||||||||||||||||| ||||||||||    
T  45513837 ttgttcctatttaactgtcacttttaaagttcaat 45513803  T

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Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 880 - 914
Target Start/End: Original strand, 46973447 - 46973481
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaat 914  Q
    |||||| ||||||||||||||||||||||||||||    
T  46973447 ttgttcttatttaactgtcactttcaaagttcaat 46973481  T

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Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 883 - 916
Target Start/End: Complemental strand, 39867068 - 39867035
Alignment:
Q  883 ttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||| ||||||||||||    
T  39867068 ttcctatttaactgtcacttttaaagttcaatgc 39867035  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 887 - 916
Target Start/End: Original strand, 45145160 - 45145189
Alignment:
Q  887 tatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||||||||||||||||    
T  45145160 tatttaactgtcactttcaaagttcaatgc 45145189  T

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Target: scaffold0024 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 845 - 916
Target Start/End: Original strand, 49137 - 49207
Alignment:
Q  845 gttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||| ||||||| |       |||||||||||||||||||||||||||||||||||||    
T  49137 gttcctttttaagtgtcacttttgga-gaaattttttgttcctatttaactgtcactttcaaagttcaatgc 49207  T

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Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 34328 - 34380
Alignment:
Q  349 gaaaattgattttctaattttcaaaagttcctaataacacataaaaatgtcta 401  Q
    ||||||||||||||| | || |||||||| ||||||||||||| |||||||||    
T  34328 gaaaattgattttctgacttccaaaagtttctaataacacatagaaatgtcta 34380  T

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Target: scaffold0343 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 7448 - 7484
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||||||||    
T  7448 ttgttcctatttaactgtcactttcaaagttcaatgc 7484  T

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Target: scaffold1213 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 184 - 148
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| ||||||||||||||||||||||||||||||    
T  184 ttgttcttatttaactgtcactttcaaagttcaatgc 148  T

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Target: scaffold0192 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 14938 - 14902
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||| |||||||||||||||||||||||||||||    
T  14938 ttgttccaatttaactgtcactttcaaagttcaatgc 14902  T

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Target: scaffold0040 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 69124 - 69160
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||| ||||||||||||||||||||||    
T  69124 ttgttcctatttaattgtcactttcaaagttcaatgc 69160  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 835 - 916
Target Start/End: Complemental strand, 184388 - 184308
Alignment:
Q  835 tactctcttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||| || ||||||||||||||||||| ||||||| |       || |||||||||||||||| |||||||||||||||||    
T  184388 tactccctccgttcctttttaagtgtcacttttgga-gaaattttttattcctatttaactgtcgctttcaaagttcaatgc 184308  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Complemental strand, 147345 - 147309
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||| ||||||||||||||||||||||||||||||    
T  147345 ttgttcatatttaactgtcactttcaaagttcaatgc 147309  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 880 - 916
Target Start/End: Original strand, 77112 - 77148
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||| ||||||    
T  77112 ttgttcctatttaactgtcactttcaaagtccaatgc 77148  T

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Target: scaffold0135 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 880 - 915
Target Start/End: Complemental strand, 30909 - 30874
Alignment:
Q  880 ttgttcctatttaactgtcactttcaaagttcaatg 915  Q
    ||||||||| ||||||||||||||||||||||||||    
T  30909 ttgttcctaattaactgtcactttcaaagttcaatg 30874  T

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Target: scaffold0886 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 841 - 916
Target Start/End: Original strand, 4502 - 4576
Alignment:
Q  841 cttcgttcctttttaagtgtcatttttggaagnnnnnnnttgttcctatttaactgtcactttcaaagttcaatgc 916  Q
    ||||||||||||||||| ||| |||||| |||       |||||  ||||||||||||||||||||||||||||||    
T  4502 cttcgttcctttttaagcgtcttttttg-aagaatttttttgtttttatttaactgtcactttcaaagttcaatgc 4576  T

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Target: scaffold0831 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 886 - 916
Target Start/End: Original strand, 2837 - 2867
Alignment:
Q  886 ctatttaactgtcactttcaaagttcaatgc 916  Q
    |||||||||||||||||||||||||||||||    
T  2837 ctatttaactgtcactttcaaagttcaatgc 2867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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