View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17251_low_13 (Length: 317)

Name: NF17251_low_13
Description: NF17251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17251_low_13
NF17251_low_13
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-269)||(9165-9432)
[»] chr6 (27 HSPs)
chr6 (1-269)||(4667978-4668245)
chr6 (1-315)||(4185542-4185855)
chr6 (1-263)||(4674831-4675092)
chr6 (1-269)||(31155163-31155431)
chr6 (80-316)||(27333002-27333238)
chr6 (80-316)||(27393742-27393978)
chr6 (41-269)||(23019535-23019763)
chr6 (160-263)||(4189203-4189306)
chr6 (123-316)||(19652404-19652598)
chr6 (1-168)||(4186454-4186611)
chr6 (157-268)||(19668617-19668728)
chr6 (104-316)||(28496191-28496403)
chr6 (104-316)||(29808601-29808814)
chr6 (200-317)||(29060827-29060944)
chr6 (200-316)||(25629073-25629189)
chr6 (161-263)||(21939631-21939734)
chr6 (55-269)||(22080502-22080718)
chr6 (154-268)||(9098290-9098404)
chr6 (123-218)||(1561512-1561608)
chr6 (104-268)||(20109333-20109496)
chr6 (201-276)||(18821578-18821653)
chr6 (228-317)||(20594088-20594177)
chr6 (159-263)||(35008397-35008500)
chr6 (225-276)||(25611482-25611533)
chr6 (198-276)||(20360719-20360797)
chr6 (159-209)||(23527930-23527980)
chr6 (203-272)||(18457006-18457074)
[»] chr5 (22 HSPs)
chr5 (161-317)||(21871288-21871444)
chr5 (161-317)||(21875568-21875724)
chr5 (1-263)||(21329266-21329531)
chr5 (1-316)||(21565629-21565947)
chr5 (41-269)||(26011799-26012027)
chr5 (1-269)||(21501919-21502190)
chr5 (154-269)||(22959298-22959414)
chr5 (104-269)||(19669089-19669255)
chr5 (96-269)||(21741308-21741482)
chr5 (161-269)||(5888940-5889049)
chr5 (1-217)||(20026756-20026973)
chr5 (161-263)||(22119963-22120066)
chr5 (161-263)||(24767107-24767210)
chr5 (161-317)||(23390213-23390368)
chr5 (201-317)||(1096755-1096871)
chr5 (159-263)||(25743967-25744071)
chr5 (104-263)||(19660608-19660767)
chr5 (228-315)||(36154547-36154634)
chr5 (228-316)||(11580963-11581051)
chr5 (200-275)||(9078239-9078314)
chr5 (228-317)||(24529535-24529625)
chr5 (228-276)||(22107132-22107180)
[»] chr7 (31 HSPs)
chr7 (1-263)||(67832-68096)
chr7 (1-263)||(47831894-47832159)
chr7 (41-269)||(16056456-16056684)
chr7 (1-263)||(16219487-16219751)
chr7 (55-269)||(22073058-22073272)
chr7 (38-263)||(9389466-9389692)
chr7 (82-263)||(16324175-16324356)
chr7 (1-316)||(44014265-44014577)
chr7 (1-313)||(810850-811165)
chr7 (228-316)||(15143755-15143843)
chr7 (154-217)||(15116722-15116785)
chr7 (1-269)||(18005733-18006003)
chr7 (154-217)||(15113185-15113248)
chr7 (161-317)||(2832023-2832178)
chr7 (1-263)||(12901412-12901679)
chr7 (124-263)||(28505071-28505210)
chr7 (161-263)||(39267416-39267519)
chr7 (201-317)||(9509476-9509593)
chr7 (123-218)||(15754703-15754799)
chr7 (198-316)||(38227765-38227883)
chr7 (154-218)||(11995845-11995909)
chr7 (123-218)||(34200994-34201089)
chr7 (161-218)||(2529868-2529926)
chr7 (161-218)||(9751365-9751423)
chr7 (159-217)||(20220005-20220063)
chr7 (200-317)||(3564081-3564198)
chr7 (228-316)||(17061678-17061766)
chr7 (228-316)||(44116820-44116907)
chr7 (228-274)||(26212310-26212356)
chr7 (228-272)||(12756478-12756522)
chr7 (228-276)||(40443703-40443751)
[»] scaffold0138 (2 HSPs)
scaffold0138 (1-269)||(13026-13296)
scaffold0138 (159-217)||(18053-18111)
[»] chr1 (28 HSPs)
chr1 (1-138)||(21161802-21161939)
chr1 (38-262)||(49261465-49261690)
chr1 (1-263)||(22921638-22921903)
chr1 (38-269)||(35981451-35981683)
chr1 (136-316)||(52927699-52927879)
chr1 (41-269)||(20636977-20637206)
chr1 (104-316)||(33681199-33681412)
chr1 (84-269)||(21161937-21162121)
chr1 (136-316)||(22237852-22238032)
chr1 (122-213)||(21896078-21896169)
chr1 (136-218)||(21754259-21754341)
chr1 (154-269)||(20248517-20248633)
chr1 (154-217)||(12271789-12271852)
chr1 (154-217)||(21861385-21861448)
chr1 (161-269)||(28194213-28194322)
chr1 (228-316)||(433322-433410)
chr1 (159-209)||(16368110-16368160)
chr1 (109-263)||(20918798-20918952)
chr1 (228-317)||(34510095-34510184)
chr1 (200-316)||(50209931-50210047)
chr1 (198-317)||(22354289-22354409)
chr1 (159-262)||(50686860-50686963)
chr1 (159-217)||(41049851-41049909)
chr1 (159-209)||(50613940-50613990)
chr1 (159-209)||(50621768-50621818)
chr1 (200-317)||(22532556-22532673)
chr1 (228-276)||(38801150-38801198)
chr1 (228-276)||(27250488-27250536)
[»] chr8 (24 HSPs)
chr8 (1-270)||(6520455-6520725)
chr8 (1-269)||(38855015-38855285)
chr8 (104-315)||(26355417-26355629)
chr8 (55-269)||(21285740-21285954)
chr8 (38-269)||(23760605-23760840)
chr8 (1-316)||(21673791-21674108)
chr8 (161-317)||(23406630-23406785)
chr8 (201-317)||(18878954-18879071)
chr8 (161-269)||(39834079-39834188)
chr8 (104-263)||(5866047-5866206)
chr8 (136-263)||(21255443-21255570)
chr8 (157-263)||(20498808-20498914)
chr8 (228-317)||(20536522-20536612)
chr8 (228-316)||(41598499-41598587)
chr8 (136-263)||(21249605-21249732)
chr8 (159-209)||(22364909-22364959)
chr8 (228-310)||(22875380-22875462)
chr8 (159-217)||(24353271-24353329)
chr8 (104-263)||(17141105-17141264)
chr8 (159-209)||(17266816-17266866)
chr8 (161-317)||(18818127-18818281)
chr8 (104-218)||(21491184-21491298)
chr8 (228-276)||(21918759-21918807)
chr8 (232-276)||(25362899-25362943)
[»] chr4 (31 HSPs)
chr4 (1-269)||(39706052-39706322)
chr4 (38-267)||(15190441-15190671)
chr4 (38-269)||(15099474-15099706)
chr4 (3-316)||(8846461-8846778)
chr4 (104-218)||(12774189-12774304)
chr4 (104-218)||(16596837-16596951)
chr4 (1-268)||(12287974-12288242)
chr4 (161-263)||(13812579-13812682)
chr4 (161-263)||(24028989-24029092)
chr4 (159-217)||(46640272-46640330)
chr4 (201-317)||(44053116-44053233)
chr4 (201-276)||(12903044-12903119)
chr4 (228-316)||(44928641-44928729)
chr4 (157-209)||(53081974-53082026)
chr4 (161-263)||(3332133-3332236)
chr4 (161-263)||(20157060-20157163)
chr4 (161-263)||(22633983-22634086)
chr4 (200-316)||(15091183-15091300)
chr4 (228-317)||(16377239-16377328)
chr4 (203-272)||(21815393-21815461)
chr4 (228-317)||(44102525-44102614)
chr4 (228-276)||(7089191-7089239)
chr4 (228-276)||(17047831-17047879)
chr4 (226-269)||(13844852-13844895)
chr4 (104-186)||(13697-13779)
chr4 (136-218)||(15552037-15552119)
chr4 (162-208)||(43198380-43198426)
chr4 (200-316)||(14038935-14039052)
chr4 (203-272)||(21815064-21815132)
chr4 (203-272)||(21818486-21818554)
chr4 (228-276)||(3096957-3097005)
[»] chr3 (34 HSPs)
chr3 (1-269)||(14234574-14234847)
chr3 (1-316)||(16097415-16097733)
chr3 (38-269)||(1465174-1465406)
chr3 (1-269)||(15471011-15471281)
chr3 (1-263)||(13210098-13210361)
chr3 (154-269)||(12171869-12171985)
chr3 (157-268)||(37250932-37251043)
chr3 (104-204)||(49389459-49389559)
chr3 (159-269)||(324481-324591)
chr3 (123-200)||(1644517-1644594)
chr3 (200-317)||(40213438-40213555)
chr3 (161-263)||(12340000-12340103)
chr3 (136-218)||(32307891-32307974)
chr3 (136-316)||(12934028-12934209)
chr3 (136-316)||(49667801-49667982)
chr3 (159-268)||(22110116-22110225)
chr3 (200-316)||(25476103-25476219)
chr3 (159-264)||(43927380-43927485)
chr3 (228-316)||(17248004-17248092)
chr3 (198-317)||(26687171-26687291)
chr3 (161-263)||(14665853-14665956)
chr3 (161-263)||(14735366-14735469)
chr3 (109-218)||(16103976-16104086)
chr3 (201-317)||(13442561-13442678)
chr3 (161-263)||(14669008-14669111)
chr3 (161-218)||(4588603-4588661)
chr3 (228-273)||(14572903-14572948)
chr3 (203-272)||(53070460-53070528)
chr3 (161-273)||(11424524-11424635)
chr3 (159-217)||(17672869-17672927)
chr3 (163-263)||(12852134-12852235)
chr3 (227-276)||(19725672-19725721)
chr3 (200-284)||(14973141-14973225)
chr3 (228-276)||(20698195-20698243)
[»] scaffold0034 (1 HSPs)
scaffold0034 (41-269)||(32664-32892)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-269)||(10614-10884)
[»] scaffold0556 (2 HSPs)
scaffold0556 (1-316)||(6899-7214)
scaffold0556 (41-269)||(8144-8372)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-269)||(6698-6969)
scaffold0333 (1-269)||(14078-14349)
[»] scaffold0020 (1 HSPs)
scaffold0020 (102-263)||(15601-15763)
[»] scaffold0023 (3 HSPs)
scaffold0023 (1-269)||(39937-40208)
scaffold0023 (41-218)||(100502-100681)
scaffold0023 (136-204)||(101617-101685)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-218)||(12853-13073)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-316)||(19351-19669)
[»] scaffold0125 (1 HSPs)
scaffold0125 (136-269)||(45555-45689)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-263)||(129992-130257)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-269)||(798-1068)
[»] scaffold0555 (1 HSPs)
scaffold0555 (1-269)||(10305-10575)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-282)||(5873-6157)
[»] scaffold0001 (2 HSPs)
scaffold0001 (122-261)||(160893-161033)
scaffold0001 (159-217)||(85440-85498)
[»] scaffold1257 (1 HSPs)
scaffold1257 (38-218)||(2032-2214)
[»] scaffold0218 (2 HSPs)
scaffold0218 (1-268)||(7841-8106)
scaffold0218 (104-218)||(29095-29209)
[»] chr2 (19 HSPs)
chr2 (1-218)||(28406064-28406284)
chr2 (157-268)||(23207523-23207634)
chr2 (55-263)||(7502-7710)
chr2 (161-317)||(23076691-23076844)
chr2 (102-263)||(23791465-23791626)
chr2 (1-270)||(25175937-25176199)
chr2 (136-218)||(22134031-22134114)
chr2 (154-217)||(22459377-22459440)
chr2 (228-317)||(298532-298621)
chr2 (201-317)||(27753862-27753979)
chr2 (1-252)||(18786683-18786935)
chr2 (198-316)||(23660307-23660425)
chr2 (159-209)||(25109136-25109186)
chr2 (228-317)||(32451646-32451736)
chr2 (161-317)||(22337364-22337519)
chr2 (198-317)||(22730950-22731070)
chr2 (198-317)||(22737897-22738017)
chr2 (225-263)||(31756229-31756267)
chr2 (154-263)||(23071733-23071842)
[»] scaffold0021 (3 HSPs)
scaffold0021 (1-268)||(136132-136401)
scaffold0021 (1-268)||(144840-145109)
scaffold0021 (228-308)||(124899-124980)
[»] scaffold1984 (1 HSPs)
scaffold1984 (154-316)||(370-533)
[»] scaffold0628 (1 HSPs)
scaffold0628 (104-269)||(2567-2733)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-218)||(5730-5949)
[»] scaffold0621 (2 HSPs)
scaffold0621 (1-269)||(6622-6892)
scaffold0621 (154-217)||(8711-8774)
[»] scaffold0207 (1 HSPs)
scaffold0207 (38-269)||(2408-2641)
[»] scaffold0737 (1 HSPs)
scaffold0737 (157-268)||(1562-1673)
[»] scaffold0028 (2 HSPs)
scaffold0028 (38-196)||(62320-62479)
scaffold0028 (136-316)||(132875-133056)
[»] scaffold1765 (1 HSPs)
scaffold1765 (104-218)||(1274-1388)
[»] scaffold0413 (2 HSPs)
scaffold0413 (154-268)||(12810-12924)
scaffold0413 (228-316)||(15333-15421)
[»] scaffold0507 (1 HSPs)
scaffold0507 (154-269)||(7822-7937)
[»] scaffold0211 (1 HSPs)
scaffold0211 (136-218)||(28625-28708)
[»] scaffold0040 (1 HSPs)
scaffold0040 (157-268)||(103403-103514)
[»] scaffold0305 (1 HSPs)
scaffold0305 (201-317)||(20690-20807)
[»] scaffold1403 (1 HSPs)
scaffold1403 (159-266)||(796-903)
[»] scaffold1137 (1 HSPs)
scaffold1137 (136-218)||(2117-2200)
[»] scaffold0166 (1 HSPs)
scaffold0166 (161-263)||(9604-9707)
[»] scaffold0003 (1 HSPs)
scaffold0003 (198-317)||(339668-339787)
[»] scaffold0016 (2 HSPs)
scaffold0016 (161-317)||(2100-2255)
scaffold0016 (161-263)||(207289-207392)
[»] scaffold0008 (1 HSPs)
scaffold0008 (38-218)||(14511-14693)
[»] scaffold0261 (1 HSPs)
scaffold0261 (123-263)||(15869-16009)
[»] scaffold0070 (1 HSPs)
scaffold0070 (200-316)||(4810-4926)
[»] scaffold0347 (1 HSPs)
scaffold0347 (161-263)||(276-379)
[»] scaffold0116 (2 HSPs)
scaffold0116 (226-269)||(43549-43592)
scaffold0116 (226-269)||(47469-47512)
[»] scaffold0080 (2 HSPs)
scaffold0080 (157-268)||(19649-19760)
scaffold0080 (199-317)||(40198-40315)
[»] scaffold0037 (2 HSPs)
scaffold0037 (161-263)||(80102-80205)
scaffold0037 (136-198)||(22509-22571)
[»] scaffold1351 (1 HSPs)
scaffold1351 (159-217)||(253-311)
[»] scaffold0123 (1 HSPs)
scaffold0123 (159-209)||(25353-25403)
[»] scaffold0011 (2 HSPs)
scaffold0011 (228-317)||(52226-52316)
scaffold0011 (228-276)||(167738-167786)
[»] scaffold0122 (1 HSPs)
scaffold0122 (200-317)||(25782-25899)
[»] scaffold0420 (1 HSPs)
scaffold0420 (159-215)||(6100-6156)
[»] scaffold0192 (1 HSPs)
scaffold0192 (161-263)||(10158-10261)
[»] scaffold0639 (1 HSPs)
scaffold0639 (161-317)||(8724-8879)
[»] scaffold0221 (1 HSPs)
scaffold0221 (161-263)||(12579-12681)
[»] scaffold0217 (1 HSPs)
scaffold0217 (203-316)||(16317-16431)
[»] scaffold0022 (1 HSPs)
scaffold0022 (159-209)||(78569-78619)
[»] scaffold0810 (1 HSPs)
scaffold0810 (177-269)||(3195-3288)
[»] scaffold0292 (1 HSPs)
scaffold0292 (198-317)||(3754-3874)
[»] scaffold0139 (1 HSPs)
scaffold0139 (159-263)||(38565-38669)
[»] scaffold0121 (1 HSPs)
scaffold0121 (198-317)||(8249-8369)
[»] scaffold0098 (1 HSPs)
scaffold0098 (161-216)||(26836-26892)
[»] scaffold0075 (2 HSPs)
scaffold0075 (172-263)||(8064-8156)
scaffold0075 (104-186)||(53395-53477)
[»] scaffold0175 (1 HSPs)
scaffold0175 (228-317)||(13406-13496)
[»] scaffold0142 (1 HSPs)
scaffold0142 (161-218)||(7586-7644)
[»] scaffold0104 (2 HSPs)
scaffold0104 (227-273)||(2136-2182)
scaffold0104 (227-273)||(9818-9864)
[»] scaffold0358 (2 HSPs)
scaffold0358 (231-276)||(253-298)
scaffold0358 (231-276)||(5029-5074)
[»] scaffold0161 (1 HSPs)
scaffold0161 (154-263)||(2215-2324)
[»] scaffold0145 (1 HSPs)
scaffold0145 (228-316)||(39075-39162)
[»] scaffold0031 (1 HSPs)
scaffold0031 (231-272)||(20187-20228)
[»] scaffold0006 (2 HSPs)
scaffold0006 (159-208)||(97253-97302)
scaffold0006 (159-208)||(106531-106580)
[»] scaffold0005 (1 HSPs)
scaffold0005 (172-209)||(267911-267948)
[»] scaffold1842 (1 HSPs)
scaffold1842 (228-276)||(808-856)
[»] scaffold0503 (1 HSPs)
scaffold0503 (228-272)||(12244-12288)
[»] scaffold0165 (2 HSPs)
scaffold0165 (228-276)||(3795-3843)
scaffold0165 (228-276)||(7859-7907)


Alignment Details
Target: scaffold0475 (Bit Score: 161; Significance: 7e-86; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 9165 - 9432
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || | |||||||| |||||||||||||||| ||    
T  9165 tataacaatatcgaatgcaattcatcaacttcatatcatcaacataaatcatgcaatgtttatacatttgtttaacatcatcaacatcattggattaaac 9264  T
Q  101 gattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaac 200  Q
     ||| || || ||| |||| |||||| || ||||| ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9265 aatt-agactcactggaacatcaacagcatgctaggcaacttagttcttaacatctaagatcaactcacaacaactcgtgcgacaaggatcgcatttaac 9363  T
Q  201 ctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||| ||||||||||||||  ||| |||||||||||||| ||||||||||||| |||||||||| |||||    
T  9364 ctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggt 9432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 161; Significance: 7e-86; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 4668245 - 4667978
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || | |||||||| |||||||||||||||| ||    
T  4668245 tataacaatatcgaatgcaattcatcaacttcatatcatcaacataaatcatgcaatgtttatacatttgtttaacatcatcaacatcattggattaaac 4668146  T
Q  101 gattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaac 200  Q
     ||| || || ||| |||| |||||| || ||||| ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4668145 aatt-agactcactggaacatcaacagcatgctaggcaacttagttcttaacatctaagatcaactcacaacaactcgtgcgacaaggatcgcatttaac 4668047  T
Q  201 ctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||| ||||||||||||||  ||| |||||||||||||| ||||||||||||| |||||||||| |||||    
T  4668046 ctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggt 4667978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 4185855 - 4185542
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || | |||||||| |||||||||||||||| ||    
T  4185855 tataacaatatcgaatgcaattcatcaacttcatatcatcaacataaatcatgcaatgtttatacatttgtttaacatcatcaacatcattggattaaac 4185756  T
Q  101 gattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaac 200  Q
     ||| || || ||| |||| ||||||||| ||||| ||||||||| | ||| |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  4185755 aatt-agactcactggaacatcaacaacatgctaggcaacttagttcttaacatctaagatcaactcacaacaactcgtgcggcaaggatcgcatttaac 4185657  T
Q  201 ctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacagg-tcagaatcacaaaagtccatcccataatctt 299  Q
    ||| ||||||||||| ||  ||| |||||||||||||| ||||||||||||| |||||||||| |||| ||||  |||||||| | ||| | | | ||||    
T  4185656 ctagcaaggcattctataaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcag-ttcacaaaaattcattctaaactctt 4185558  T
Q  300 tccaggttcaatctca 315  Q
    ||||||||||||||||    
T  4185557 tccaggttcaatctca 4185542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 4675092 - 4674831
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || | |||||||| |||||||||||||||| ||    
T  4675092 tataacaatatcgaatgcaattcatcaacttcatatcatcaacataaatcatgcaatgtttatacatttgtttaacatcatcaacatcattggattaaac 4674993  T
Q  101 gattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaac 200  Q
     ||| || || ||| |||| |||||| || ||||| ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4674992 aatt-agactcactggaacatcaacagcatgctaggcaacttagttcttaacatctaagatcaactcacaacaactcgtgcgacaaggatcgcatttaac 4674894  T
Q  201 ctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    ||| ||||||||||||||  ||| |||||||||||||| ||||||||||||| |||| |||||    
T  4674893 ctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgacgagt 4674831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 31155431 - 31155163
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| |     
T  31155431 tataacaatatcgaatgcaattcatcaacttcatatcatcaacataaatcatgcaatgtttatacatttatataacatcaacaacatcatcggattaaaa 31155332  T
Q  101 gattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaac 200  Q
     ||| || || ||| |||| |||||| |||||||| ||||||||| | ||| |||||| |||| ||||||||||||||||||||||||| | ||||||||    
T  31155331 aatttagactcactggaacatcaacagcaagctaggcaacttagttcttaacatctaaaatcatctcacaacaactcgtgcgacaaggaccgcatttaac 31155232  T
Q  201 ctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||||||||||||  ||||   || |||||||||||||| |||||||| |||| ||||| ||||||||||    
T  31155231 ctaacaaggcatgttgtaaaggggtagctcgcgaggcgagagcctctgctcgccatggagagtacaggt 31155163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 80 - 316
Target Start/End: Complemental strand, 27333238 - 27333002
Alignment:
Q  80 aacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgt 179  Q
    ||||||| ||||||||||||| |||||||||||||  |||  ||||| |||| || |||| |||||  ||||  ||||||||||||||||| ||||||||    
T  27333238 aacaacaacattggattatacaattcaggcttactgaaacagcaacatcaagataaacaatttagtttctaacctctaagatcaactcacatcaactcgt 27333139  T
Q  180 gcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcaca 279  Q
    |||||||||||||||||||||||||||| |||||||||| ||||  || |||||||||| ||||||||||||| |||||||||| |||||   | |||||    
T  27333138 gcgacaaggatcacatttaacctaacaaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcaca 27333039  T
Q  280 aaagtccatcccataatctttccaggttcaatctcat 316  Q
    ||| | ||| | | ||||||||||||||||| |||||    
T  27333038 aaacttcattctaaaatctttccaggttcaacctcat 27333002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 80 - 316
Target Start/End: Complemental strand, 27393978 - 27393742
Alignment:
Q  80 aacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgt 179  Q
    ||||||| ||||||||||||| |||||||||||||  |||  ||||| |||| || |||| |||||  ||||  ||||||||||||||||| ||||||||    
T  27393978 aacaacaacattggattatacaattcaggcttactgaaacagcaacatcaagataaacaatttagtttctaacctctaagatcaactcacatcaactcgt 27393879  T
Q  180 gcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcaca 279  Q
    |||||||||||||||||||||||||||| |||||||||| ||||  || |||||||||| ||||||||||||| |||||||||| |||||   | |||||    
T  27393878 gcgacaaggatcacatttaacctaacaaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcaca 27393779  T
Q  280 aaagtccatcccataatctttccaggttcaatctcat 316  Q
    ||| | ||| | | ||||||||||||||||| |||||    
T  27393778 aaacttcattctaaaatctttccaggttcaacctcat 27393742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 41 - 269
Target Start/End: Original strand, 23019535 - 23019763
Alignment:
Q  41 aacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagacaac 140  Q
    ||||||| ||||  ||||| |||||| ||||||||||| ||||||  |||| |||||||   ||||||||||||  |||  ||||| |||| || |||||    
T  23019535 aacataattcatgtaatgtatatacaattatataacattaacaacgacattagattatatagttcaggcttactgaaacaacaacagcaagataaacaac 23019634  T
Q  141 ttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcggg 240  Q
    |||||  ||||  || |||||||||||||| |||||||| |||||| |||| ||||||||||||| | ||||| |||| ||||  | ||||||||||  |    
T  23019635 ttagtttctaacctccaagatcaactcacatcaactcgttcgacaaagatcgcatttaacctaaccaagcattttgtaattggacaactcgcgaggcaag 23019734  T
Q  241 agcctctactcgtcatggcgagtacaggt 269  Q
     ||||||||||| |||||||||| |||||    
T  23019735 ggcctctactcgccatggcgagttcaggt 23019763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 160 - 263
Target Start/End: Original strand, 4189203 - 4189306
Alignment:
Q  160 atcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||  ||| |||||||||||||| ||||||||||||| |||| |    
T  4189203 atcaactcacaacaactcgtgcgacaacgatcgcatttaacctagcaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgac 4189302  T
Q  260 gagt 263  Q
    ||||    
T  4189303 gagt 4189306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 123 - 316
Target Start/End: Original strand, 19652404 - 19652598
Alignment:
Q  123 aacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtattt 221  Q
    |||| |||| || ||||||||||  ||||  ||||||||||||||||| ||||||||||||||| |||| |||||| ||| ||||||| ||| ||||  |    
T  19652404 aacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttatcctaaacaaggtattttgtaact 19652503  T
Q  222 ggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcat 316  Q
     |||||| ||||||||| ||||||||||||| |||||||||| |||||   | |||||||| | ||| | | | |||||||||||||||||||||    
T  19652504 agttagcccgcgaggcgagagcctctactcgccatggcgagttcaggtacaattcacaaaaattcattctaaagtctttccaggttcaatctcat 19652598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 4186454 - 4186611
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |          |||||||||||||||| ||    
T  4186454 tataacaatatcgaatgcaattcatcaacttcatatcatcaacataaatcatgcaatgtttatacatttgt---------tcaacatcattggattaaac 4186544  T
Q  101 gattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactca 168  Q
     | | || || ||| |||| ||||||||| ||||| ||||||||| | ||| ||||||||||||||||    
T  4186545 -agttagactcactggaacatcaacaacatgctaggcaacttagttcttaacatctaagatcaactca 4186611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 157 - 268
Target Start/End: Original strand, 19668617 - 19668728
Alignment:
Q  157 aagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcat 256  Q
    |||||||||||||| ||||||||||||||| | ||||||||||||||||||||  ||||||| ||||  ||||||||||||| |||||||||||||  ||    
T  19668617 aagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgtaattggacagctcgcgaggcgagagcctctactcgctat 19668716  T
Q  257 ggcgagtacagg 268  Q
    ||||||| ||||    
T  19668717 ggcgagttcagg 19668728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 316
Target Start/End: Complemental strand, 28496403 - 28496191
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaaccta 203  Q
    |||| |||||| |||| | |||| |||| || ||||||||||  ||||| ||||||||||||||||| ||||||||||||||| |||| |||| ||||||    
T  28496403 tcagtcttactggaacattaacagcaaggtaaacaacttagtttctaaactctaagatcaactcacatcaactcgtgcgacaaagatcgcatt-aaccta 28496305  T
Q  204 a-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatctttc 301  Q
    | ||||||||||||||         ||||||||||| |||||||| |||| |||||||||| ||||||||| || |||||| | ||| | | | ||||||    
T  28496304 aacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaaagtttcattcta-agtctttc 28496206  T
Q  302 caggttcaatctcat 316  Q
    |||||||||||||||    
T  28496205 caggttcaatctcat 28496191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 316
Target Start/End: Complemental strand, 29808814 - 29808601
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaaccta 203  Q
    |||| |||||| |||| | |||| |||| || ||||||||||  ||||| ||||||||||||||||| ||||||||||||||| |||| |||| ||||||    
T  29808814 tcagtcttactggaacattaacagcaaggtaaacaacttagtttctaaactctaagatcaactcacatcaactcgtgcgacaaagatcgcatt-aaccta 29808716  T
Q  204 a-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtcca-tcccataatctttc 301  Q
    | ||||||||||||||         ||||||||||| |||||||| |||| |||||||||| ||||||||| || ||||  | || ||  | ||||||||    
T  29808715 aacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttc 29808616  T
Q  302 caggttcaatctcat 316  Q
    |||||||||||||||    
T  29808615 caggttcaatctcat 29808601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 317
Target Start/End: Original strand, 29060827 - 29060944
Alignment:
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctt 299  Q
    |||||||||||| ||||| | ||| |  ||||||||||| ||||||||||||||| |||||||| ||||||||| |  ||||||| ||| | | ||||||    
T  29060827 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagatttccaaaagttcattctacaatctt 29060926  T
Q  300 tccaggttcaatctcatc 317  Q
    ||||||||||||||||||    
T  29060927 tccaggttcaatctcatc 29060944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 25629189 - 25629073
Alignment:
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctt 299  Q
    |||||||||||| ||||| | ||| |  ||||||||||| |||||||| |||| || ||||||||||||||| ||||||||||||  || | | ||| ||    
T  25629189 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccacggcgagtacaggtcataatcacaaaagtttattctaaaatatt 25629090  T
Q  300 tccaggttcaatctcat 316  Q
    |||||||||||||||||    
T  25629089 tccaggttcaatctcat 25629073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 21939631 - 21939734
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||| |      |||||||||||| |||||||| |||| ||||||    
T  21939631 tcaactcataacaactcgtgcgacaaggatcacatttaacctaaacaagacattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggc 21939730  T
Q  260 gagt 263  Q
    ||||    
T  21939731 gagt 21939734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 269
Target Start/End: Complemental strand, 22080718 - 22080502
Alignment:
Q  55 aatgtttatacacttatataacatcaacaacatcattggattata-cgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaa 153  Q
    ||||| |||||| ||||||||||| |||||||||||| | | ||| | ||| |||||||||  |||  ||| | |||| ||  |||||||||  ||||      
T  22080718 aatgtatatacatttatataacattaacaacatcattaggtcatatcaatttaggcttactgaaacaacaagagcaagataagcaacttagtttctaacc 22080619  T
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcg 252  Q
    ||||||||||||||||| |||||||||||||||||||| ||||   ||| |||||||  ||||||        ||||||||||||| |||||||||||||    
T  22080618 tctaagatcaactcacatcaactcgtgcgacaaggatcgcattattcctaaacaaggtgttctgtcagacacaagctcgcgaggcgagagcctctactcg 22080519  T
Q  253 tcatggcgagtacaggt 269  Q
     |||||||||| |||||    
T  22080518 ccatggcgagttcaggt 22080502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 268
Target Start/End: Complemental strand, 9098404 - 9098290
Alignment:
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgt 253  Q
    ||||||||||||||||| ||||||||||||||| | | ||| | ||||||||||||  |||||| | |  | |||||| |||||| |||||||||||||     
T  9098404 tctaagatcaactcacatcaactcgtgcgacaaaggtgacaataaacctaacaaggtgttctgtctctcatgagctcgtgaggcgagagcctctactcgc 9098305  T
Q  254 catggcgagtacagg 268  Q
     ||||||||| ||||    
T  9098304 tatggcgagttcagg 9098290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 1561512 - 1561608
Alignment:
Q  123 aacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgta 218  Q
    |||| |||| || ||||||||||  ||||  |||| |||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||| ||||    
T  1561512 aacagcaagataaacaacttagtttctaacctctaggatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattatgta 1561608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 268
Target Start/End: Original strand, 20109333 - 20109496
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaaccta 203  Q
    |||| |||||||||| | || || |||| || ||||||||||  || |  ||||||||||||||||| ||||||||||||||| | ||||| | ||| ||    
T  20109333 tcagtcttactagaaagacatcagcaagataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaaggtcacaataaactta 20109432  T
Q  204 acaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacagg 268  Q
    ||||||  |||||| | |  | |||||| |||||| |||||||||||||  ||||||||| ||||    
T  20109433 acaagg-gttctgtctctcatgagctcgtgaggcgagagcctctactcgctatggcgagttcagg 20109496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 276
Target Start/End: Complemental strand, 18821653 - 18821578
Alignment:
Q  201 ctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    |||||||| || ||||| | ||| | |||||||||||| |||||||| |||| |||||||||| ||||||||||||    
T  18821653 ctaacaagtcactctgtttctgggtcgctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatc 18821578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 317
Target Start/End: Original strand, 20594088 - 20594177
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcatc 317  Q
    ||||||||||| |||||||| |||| | | |||||| ||||||||| |  |||||||  || | | ||||||||||||||||||||||||    
T  20594088 ctcgcgaggcgagagcctctgctcgccgtagcgagttcaggtcagatttccaaaagtttattctacaatctttccaggttcaatctcatc 20594177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 35008397 - 35008500
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatgg 258  Q
    |||||||||||| |||||||||| |||| | ||||||||| |||||||| ||| ||||| |      ||||||||||||| |||||||||||||  ||||    
T  35008397 gatcaactcacatcaactcgtgcaacaaaggtcacatttatcctaacaa-gcagtctgtctcacaacagctcgcgaggcgagagcctctactcgctatgg 35008495  T
Q  259 cgagt 263  Q
    |||||    
T  35008496 cgagt 35008500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 25611533 - 25611482
Alignment:
Q  225 tagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    |||||||||||||| |||||||| |||  |||||||||| ||||||||||||    
T  25611533 tagctcgcgaggcgagagcctctgctctccatggcgagttcaggtcagaatc 25611482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 276
Target Start/End: Complemental strand, 20360797 - 20360719
Alignment:
Q  198 aacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    ||||||||||| || ||||| | ||| |  ||||||||||| |||||||  |||| |||||||||| ||||||||||||    
T  20360797 aacctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctcagctcgccatggcgagttcaggtcagaatc 20360719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 23527980 - 23527930
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaagg 209  Q
    ||||||||||| |||||||||||||||| ||||||||  ||||| ||||||    
T  23527980 gatcaactcaccacaactcgtgcgacaaagatcacatgaaacctgacaagg 23527930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 18457006 - 18457074
Alignment:
Q  203 aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcag 272  Q
    |||||||| ||||||| ||||  | ||||||||||| ||||||||||||| |||||| ||| ||||||||    
T  18457006 aacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggctagttcaggtcag 18457074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 2e-64; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 161 - 317
Target Start/End: Complemental strand, 21871444 - 21871288
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcg 260  Q
    |||||||| |||||||| ||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  21871444 tcaactcataacaactcatgcgacaaggatcgcgtttaacctagcaaggcattctgtatttggttagctcgcgagccgggagcctctactcgccatggcg 21871345  T
Q  261 agtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcatc 317  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21871344 agtacaggtcagaatcacaaaagtccattccataatctttccaggttcaatctcatc 21871288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 161 - 317
Target Start/End: Complemental strand, 21875724 - 21875568
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcg 260  Q
    |||||||| |||||||| ||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  21875724 tcaactcataacaactcatgcgacaaggatcgcgtttaacctagcaaggcattctgtatttggttagctcgcgagccgggagcctctactcgccatggcg 21875625  T
Q  261 agtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcatc 317  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21875624 agtacaggtcagaatcacaaaagtccattccataatctttccaggttcaatctcatc 21875568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 21329531 - 21329266
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatat-catcaa-cataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||| ||| |||||||| |||||  |||||| ||||| ||||  ||||| |||||| ||||||||||| | ||||| |||| ||||||    
T  21329531 tataacaatatcgaattcaagtcatcaacatcataaacatcaaacataattcatgtaatgtatatacaattatataacattagcaacaacattagattat 21329432  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    || |||||||||||||  |||  |||||||||| || ||||||||||  || |  ||||||||||||||||| ||||||||||||||| |||| ||||||    
T  21329431 acaattcaggcttactgaaacaacaacaacaagataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaagatcgcattta 21329332  T
Q  199 acct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    |||| ||||||||||||||||  | | ||  |||||||||| |||||||||||||  |||||||||    
T  21329331 acctaaacaaggcattctgtaactaggtaattcgcgaggcgagagcctctactcgctatggcgagt 21329266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 21565629 - 21565947
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaac--ttcatatcatcaa-cataaatcatacaatgtttatacacttatataacatcaacaacatcattggatta 97  Q
    |||||||||||||||||||| ||||||||  |||| || ||||| ||||| ||||  ||||| |||||| ||||||||||| |  |||| |||    | |    
T  21565629 tataacaatatcgaatgcaagtcatcaacatttcaaat-atcaaacataattcatgtaatgtatatacaattatataacattataaacaacatcaattca 21565727  T
Q  98 tacgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattt 197  Q
    || |  |||| |||||||||||  |||||||||| || ||||||||||  ||||  ||||||||||||||||| ||||||||||||||| |||| |||||    
T  21565728 tatgcatcagtcttactagaacaacaacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcattt 21565827  T
Q  198 aacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataat 296  Q
     || | |||||| |||||||||  | |||||||| ||||||| |||||||| |||| |||||||||| |||||   | |||| ||| | ||| | | |||    
T  21565828 tacataaacaagtcattctgtaactagttagctcacgaggcgagagcctctgctcgccatggcgagttcaggtacaattcacgaaaattcattctaaaat 21565927  T
Q  297 ctttccaggttcaatctcat 316  Q
    ||||||||||||||||||||    
T  21565928 ctttccaggttcaatctcat 21565947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 41 - 269
Target Start/End: Complemental strand, 26012027 - 26011799
Alignment:
Q  41 aacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagacaac 140  Q
    ||||||| ||||  ||||| |||||| ||||||||||||||||||| |||  |||||||   ||||||||||||  |||  ||| |||||| || |||||    
T  26012027 aacataattcatgtaatgtatatacaattatataacatcaacaacaacatcagattatatagttcaggcttactgaaacaacaataacaagataaacaac 26011928  T
Q  141 ttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcggg 240  Q
    |||||  ||||  || |||||||||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||||  | |  | |||||||||||      
T  26011927 ttagtttctaacctccaagatcaactcacatcaactcgtgtgacaaagatcacatttaacctaacaaagcattctgtaactagacaactcgcgaggcgaa 26011828  T
Q  241 agcctctactcgtcatggcgagtacaggt 269  Q
     ||||||||||| |||||||||| |||||    
T  26011827 ggcctctactcgccatggcgagttcaggt 26011799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 21502190 - 21501919
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatat-catcaa-cataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| |||||| | || ||  |||||| ||||| ||||  ||||| |||||| ||||||||||| ||||||| |||| ||| ||    
T  21502190 tataacaatatcgaatgcaagtcatcatcatcttaaacatcaaacataattcatgtaatgtatatacaattatataacattaacaacaacattagatcat 21502091  T
Q  99 acga-ttcaggcttactagaacgtcaacaacaagctagacaacttagtcc-ctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatt 196  Q
    |  | ||||||||||||  |||  ||||| |||| || ||||||||||   ||||  || |||||||||| ||| |||||||||||||||  ||| ||||    
T  21502090 attaattcaggcttactgaaacaacaacagcaagataaacaacttagttttctaacttccaagatcaactaacatcaactcgtgcgacaaatatcgcatt 21501991  T
Q  197 taacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||||| |||||||||||||| |  ||| || ||||||||||| |||||||||||||  ||||||||| |||||    
T  21501990 taacccaacaaggcattctg-aactgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggt 21501919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 269
Target Start/End: Complemental strand, 22959414 - 22959298
Alignment:
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcg 252  Q
    ||||||||||||||||| ||||| |||| ||||| ||| |||||||||||| ||||||||||||||  | |||||||||||||||| |||||||||||||    
T  22959414 tctaagatcaactcacatcaacttgtgcaacaagaatcgcatttaacctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctctactcg 22959315  T
Q  253 tcatggcgagtacaggt 269  Q
     |||||||||| |||||    
T  22959314 ccatggcgagttcaggt 22959298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 269
Target Start/End: Original strand, 19669089 - 19669255
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct- 202  Q
    |||| |||||| ||||  |||||||||| || || |||||||  ||||  ||||||||||||||||| ||||| |||||||||| |||||||||| |||     
T  19669089 tcagtcttactggaacaacaacaacaagataaacgacttagtttctaacctctaagatcaactcacatcaacttgtgcgacaagaatcacatttatccta 19669188  T
Q  203 aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||||||||||||||||  | ||||||| | |||||| |||||||||| || |||||||||| |||||    
T  19669189 aacaaggcattctgtaactagttagctggtgaggcgagagcctctacacgccatggcgagttcaggt 19669255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 96 - 269
Target Start/End: Complemental strand, 21741482 - 21741308
Alignment:
Q  96 tatacgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacat 195  Q
    ||||| || |||||||||| ||| | ||||| |||| ||   ||||||||  ||||  || |||||||||||||| ||||||||||||||| |||| | |    
T  21741482 tatacaatccaggcttactggaatgacaacatcaaggtaattaacttagtttctaacctccaagatcaactcacatcaactcgtgcgacaaagatcgctt 21741383  T
Q  196 ttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||||||||| |||| |||| ||||  |||||||||| ||||||| ||||||||||||| |||||||||| |||||    
T  21741382 ttaacctaaacaagacattatgtaactggttagctcacgaggcgagagcctctactcgccatggcgagttcaggt 21741308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 161 - 269
Target Start/End: Complemental strand, 5889049 - 5888940
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| |||| | |||||||||| |||| |||||||||||| ||||||||||||||  ||| |||||||||||||| ||||||||||||| ||||||    
T  5889049 tcaactcataacatcacgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggc 5888950  T
Q  260 gagtacaggt 269  Q
    |||| |||||    
T  5888949 gagttcaggt 5888940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 20026973 - 20026756
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatatcatcaa-cataaatcatacaatgtttatacacttatataacatcaacaacatcattggattata 99  Q
    ||||| |||||| ||||||||||| |||| ||| | |||||| ||||| ||||  ||||| ||||||  |||||| ||| | ||||| ||||  |  |||    
T  20026973 tataataatatcaaatgcaattcaacaacatcacaacatcaaacataattcatgtaatgtatatacaactatatagcattatcaacaacattaaaacata 20026874  T
Q  100 cgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaa 199  Q
      |||||||||||||  |||  | |||||||| || ||||||||||  || |  ||||||||||||||||| | ||||||||||||| | ||||||||||    
T  20026873 taattcaggcttactgaaacaactacaacaagataaacaacttagtttcttacctctaagatcaactcacatcgactcgtgcgacaacggtcacatttaa 20026774  T
Q  200 cctaacaaggcattctgt 217  Q
     |||||||||||||||||    
T  20026773 gctaacaaggcattctgt 20026756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 22120066 - 22119963
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||||| |      |||||||||||| |||||||| |||| ||||||    
T  22120066 tcaactcataacaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggc 22119967  T
Q  260 gagt 263  Q
    ||||    
T  22119966 gagt 22119963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 24767210 - 24767107
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||| |      |||||||||||| |||||||| |||| |||| |    
T  24767210 tcaactcataacaactcgtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatgac 24767111  T
Q  260 gagt 263  Q
    ||||    
T  24767110 gagt 24767107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 317
Target Start/End: Complemental strand, 23390368 - 23390213
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcg 260  Q
    ||||||| | ||||||||||| |||| | |||||   || ||||||||||| ||||| || || |  |||| ||||||  |||||||||||| |||||||    
T  23390368 tcaactctcgacaactcgtgcaacaaaggtcacaa--aatctaacaaggcactctgttttagggtcactcgtgaggcgatagcctctactcgccatggcg 23390271  T
Q  261 agtacaggtcagaatcacaaaag-tccatcccataatctttccaggttcaatctcatc 317  Q
    ||| |||||||||||| || ||| | ||| | | ||||||||||||||||||||||||    
T  23390270 agttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatc 23390213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 317
Target Start/End: Original strand, 1096755 - 1096871
Alignment:
Q  201 ctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatcttt 300  Q
    |||| |||||||||||| | ||| |  ||||||||||| ||||||||||||| | |||||||| ||||||||| |  ||||||| ||| |   |||||||    
T  1096755 ctaaaaaggcattctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagatttccaaaagttcattctgcaatcttt 1096854  T
Q  301 ccaggttcaatctcatc 317  Q
    |||| ||||||||||||    
T  1096855 ccagattcaatctcatc 1096871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 25743967 - 25744071
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatgg 258  Q
    |||||||||||| ||||||||||||||| | ||||||  | |||||||||||| |||||   |     |||||||||||| ||||||||||||| |||||    
T  25743967 gatcaactcacatcaactcgtgcgacaaaggtcacataaaccctaacaaggcagtctgtcactcaagggctcgcgaggcgagagcctctactcgccatgg 25744066  T
Q  259 cgagt 263  Q
    |||||    
T  25744067 cgagt 25744071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 263
Target Start/End: Complemental strand, 19660767 - 19660608
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaaccta 203  Q
    |||| |||||| |||| | |||| |||| || ||||||||||  ||||  ||||||||||||||||| |||||||  |||||| |||  |||| ||||||    
T  19660767 tcagtcttactggaacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagattgcattcaaccta 19660668  T
Q  204 acaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    | ||||| |||||||        |||||||||||| |||||||| |||| ||||||||||    
T  19660667 aaaaggcgttctgtaacacaaacgctcgcgaggcgagagcctctgctcgccatggcgagt 19660608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 315
Target Start/End: Complemental strand, 36154634 - 36154547
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctca 315  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||||| || ||||  |  || | | ||||| ||||||||||||||||    
T  36154634 ctcgcgaggcgagagcctctactcgccatggcgagttcaggtcagattctcaaagttttattctaaaatctatccaggttcaatctca 36154547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 316
Target Start/End: Complemental strand, 11581051 - 11580963
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcat 316  Q
    ||||||||||| |||||||| |||| |||||||||| ||||||||| || ||||  |  || | | ||||| |||||||||||||||||    
T  11581051 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaagttttattctaaaatctatccaggttcaatctcat 11580963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 275
Target Start/End: Original strand, 9078239 - 9078314
Alignment:
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaat 275  Q
    |||||||||||| ||||| | ||| |  ||||||||||| |||||||| |||| | |||||||| |||||||||||    
T  9078239 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaat 9078314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 317
Target Start/End: Original strand, 24529535 - 24529625
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatctttccaggttcaatctcatc 317  Q
    ||||||||||| |||||||| |||| | |||||||| ||| |||||||  |||||| | ||| | | || |||||||||||||||||||||    
T  24529535 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagatcagaattccaaaagtttcattctacaacctttccaggttcaatctcatc 24529625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 22107180 - 22107132
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    ||||||||||| |||||||| |||| ||||| |||| ||||||||||||    
T  22107180 ctcgcgaggcgagagcctctgctcgccatggtgagttcaggtcagaatc 22107132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 67832 - 68096
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatac 100  Q
    |||||||||||||||||||| ||| |||| ||  |  |||||||||| ||||| ||||| |||||| ||||||||||| ||||||| |||| ||| |||     
T  67832 tataacaatatcgaatgcaaatcaacaacatctcaatatcaacataattcatataatgtatatacaattatataacattaacaacaacattagatcatat 67931  T
Q  101 ga-ttcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaa 199  Q
     | |||||||| |||  |||  ||||| |||| || ||||||||||  ||||  ||||||||||||||||| ||||| |||||||||||||| |||||||    
T  67932 taattcaggctcactgaaacaacaacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaacttgtgcgacaaggatcgcatttaa 68031  T
Q  200 cctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    ||||| ||||||||||||||  |||||||||||||||||| ||||||||||||| ||||||||||    
T  68032 cctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagt 68096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 47831894 - 47832159
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatat-catcaa-cataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| |||||||| |||||  |||||| ||||| ||||| ||||| |||||| ||||||||||| | | ||| |||| ||||||    
T  47831894 tataacaatatcgaatgcaagtcatcaacatcataaacatcaaacataattcatataatgtatatacaattatataacattagcgacaacattagattat 47831993  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    || |||||||||||||  |||  |||||||||| || | ||||||||  ||||  || |||||||||||||| |||||||| |||||| |||||||||||    
T  47831994 acaattcaggcttactgaaacaacaacaacaagataaataacttagtttctaacctccaagatcaactcacatcaactcgtccgacaaagatcacattta 47832093  T
Q  199 acct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    |||| ||||| ||||||||||  |||  || |||||||||| | ||||||||||| ||||||||||    
T  47832094 acctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagt 47832159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 41 - 269
Target Start/End: Original strand, 16056456 - 16056684
Alignment:
Q  41 aacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagacaac 140  Q
    ||||||| ||||  ||||| |||||| ||||||||||| ||||||| |||| |||||||  ||||||||||||   |||  ||||| |||| || |||||    
T  16056456 aacataattcatgtaatgtatatacaattatataacattaacaacaacattagattatatcattcaggcttaccgaaacaacaacatcaagataaacaac 16056555  T
Q  141 ttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcggg 240  Q
    |||||  || |  ||||||||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||  ||| || ||||||||||| |    
T  16056556 ttagtttcttacctctaagatcaactcacatcaactcgtgctacaaagatcgcatttaacctaacaaggcattctgtaactgggtaactcgcgaggcgag 16056655  T
Q  241 agcctctactcgtcatggcgagtacaggt 269  Q
    ||||||||||||  ||||||||| |||||    
T  16056656 agcctctactcgctatggcgagttcaggt 16056684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 16219751 - 16219487
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatat-catcaa-cataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| |||||||| || ||  |||||| ||||| ||||  ||||| |||||| ||||||||||| ||||||| |||| ||||||    
T  16219751 tataacaatatcgaatgcaagtcatcaacatcttaaacatcaaacataattcatgtaatgtatatacaattatataacattaacaacaacattagattat 16219652  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    |  |||||||||||||  |||  ||||| |||| || ||||||||||  ||||  || |||||||||| ||| ||||| ||||||||| |||| ||||||    
T  16219651 ataattcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacctccaagatcaactaacatcaacttgtgcgacaaagatcgcattta 16219552  T
Q  199 acctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    ||||||||||||||||||||  | |  | ||||||||||| | ||||||||||| ||||||||||    
T  16219551 acctaacaaggcattctgtaactagacaactcgcgaggcgagggcctctactcgccatggcgagt 16219487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 55 - 269
Target Start/End: Original strand, 22073058 - 22073272
Alignment:
Q  55 aatgtttatacacttatataacatcaacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaat 154  Q
    ||||| ||| || ||||||||||| ||||||| |||| |||||||  |||||||||||||  |||  ||||| ||||  | |||||||||| ||| |  |    
T  22073058 aatgtatatgcaattatataacattaacaacaacattagattatataattcaggcttactgaaacaacaacatcaagacaaacaacttagttccttacct 22073157  T
Q  155 ctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtc 254  Q
     ||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||  ||| || ||||||||||| | ||||||||||| |    
T  22073158 gtaagatcaactcacatcaactcgtgcgacaaggatcgcatttaacctaacaaagcattctgtaactgggtaactcgcgaggcgagggcctctactcgcc 22073257  T
Q  255 atggcgagtacaggt 269  Q
    ||||||||| |||||    
T  22073258 atggcgagttcaggt 22073272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 38 - 263
Target Start/End: Complemental strand, 9389692 - 9389466
Alignment:
Q  38 atcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagac 137  Q
    |||||||||| ||||||||||| |||||| ||||||||||| | || ||  ||| || ||||| || |||||||||| ||| | ||||| |||| | ||     
T  9389692 atcaacataattcatacaatgtatatacaattatataacattatcatcaatattagaatatacaatccaggcttactggaatgacaacatcaaggtcgat 9389593  T
Q  138 aacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgagg 236  Q
    ||||||||  ||||  || |||||||||||||| ||||||||| ||||| |||| | |||||||| ||||||||||||||||  || |||||||||||||    
T  9389592 aacttagtttctaacctccaagatcaactcacatcaactcgtgtgacaaagatcgcttttaacctaaacaaggcattctgtaactgcttagctcgcgagg 9389493  T
Q  237 cgggagcctctactcgtcatggcgagt 263  Q
    || ||||||||||||| ||||||||||    
T  9389492 cgagagcctctactcgccatggcgagt 9389466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 82 - 263
Target Start/End: Original strand, 16324175 - 16324356
Alignment:
Q  82 caacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgc 181  Q
    ||||| |||| |||||||| |||||||||||||  |||  ||||| |||| |  ||||||||||  ||||  ||||||||||||||||| |||||| |||    
T  16324175 caacaacattagattatacaattcaggcttactgaaacaacaacagcaagatcaacaacttagtttctaacctctaagatcaactcacatcaactcatgc 16324274  T
Q  182 gacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    |||||||||||||||||||||||||||||||||||||  |||  || |||| ||||| | ||||||||||| ||||||||||    
T  16324275 gacaaggatcacatttaacctaacaaggcattctgtaactgggcagttcgcaaggcgagggcctctactcgccatggcgagt 16324356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 44014265 - 44014577
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatac 100  Q
    |||||||||||||||||||| ||| || || || || |||||||||| ||||| ||||| |||||| ||||||| ||| || |||| |||| ||| |||     
T  44014265 tataacaatatcgaatgcaaatcaacatct-caaat-atcaacataattcatataatgtatatacagttatataccattaaaaacaacattagatcatat 44014362  T
Q  101 ga-ttcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaa 199  Q
     | ||||||||||||  |||  ||||| |||| || ||||||||||   |||  |||  |||||||||||| ||| ||||||||||| |||| |||||||    
T  44014363 taattcaggcttactgaaacaacaacagcaagata-acaacttagtttttaacctct--gatcaactcacatcaattcgtgcgacaatgatcgcatttaa 44014459  T
Q  200 cctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatct 298  Q
    ||||| ||||||||||||||   ||||||||||||||||| ||||||||||||  |||||||||| |||||   | | |||||| | ||| | | |||||    
T  44014460 cctaaacaaggcattctgtaaccggttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtgcaactaacaaaaattcattctaaaatct 44014559  T
Q  299 ttccaggttcaatctcat 316  Q
    ||||||||||||||||||    
T  44014560 ttccaggttcaatctcat 44014577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 313
Target Start/End: Complemental strand, 811165 - 810850
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatat-catcaa-cataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| |||| ||| |||||  |||||| ||||| ||||  ||||| |||||| ||||||||||| | ||||| |||| ||||||    
T  811165 tataacaatatcgaatgcaagtcattaacatcataaacatcaaacataattcatgtaatgtatatacaattatataacattagcaacaacattagattat 811066  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    || |||||||||||||  |||  ||||| |||| || | ||||||||  ||||  || ||| |||||||||| ||||| | ||||||| |||| ||||||    
T  811065 acaattcaggcttactgaaactacaacagcaagataaataacttagtttctaacttccaaggtcaactcacatcaacttgcgcgacaaagatcgcattta 810966  T
Q  199 acct-aacaaggcattctgt-atttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt-cagaatcacaaaagtccatcccataa 295  Q
    || | ||||||||||| ||| |  |   || ||||||||||| ||||||||||||| |||||||||| ||||| |||  |||||||| | ||| | | |     
T  810965 acttaaacaaggcattttgtaacataagta-ctcgcgaggcgagagcctctactcgccatggcgagttcaggtacag-ttcacaaaaattcattctaaat 810868  T
Q  296 tctttccaggttcaatct 313  Q
    ||||||||||||||||||    
T  810867 tctttccaggttcaatct 810850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 228 - 316
Target Start/End: Complemental strand, 15143843 - 15143755
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcat 316  Q
    ||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| | | |||||||||||||||||||||||    
T  15143843 ctcgcgaggcgagagcctctgctcgccatggcgagtacaggtcagaatcacaaaagttcattctaaaatctttccaggttcaatctcat 15143755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 15116722 - 15116785
Alignment:
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgt 217  Q
    ||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||    
T  15116722 tctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcattctgt 15116785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 18005733 - 18006003
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttc--atatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| ||| |||| ||  | || |||||||||| ||||| ||||| |||||| ||||||| ||| ||||||| |||| ||| ||    
T  18005733 tataacaatatcgaatgcaaatcaacaacatctcaaat-atcaacataattcatataatgtatatacaattatataccattaacaacaacattagatcat 18005831  T
Q  99 acgat-tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattt 197  Q
    |  |  |||||||||||  |||  ||||| |||| || ||||||||||  ||||  ||||||||||||||| | ||||| ||||||||| |||| || ||    
T  18005832 attaaatcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacctctaagatcaactcatatcaacttgtgcgacaaagatcgca-tt 18005930  T
Q  198 aacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    | ||| ||||||||||| ||||  | || |  |||||||||| | ||||||| ||| |||||||||| |||||    
T  18005931 atcctaaacaaggcattttgtaactagtcaattcgcgaggcgagggcctctagtcgccatggcgagttcaggt 18006003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 15113185 - 15113248
Alignment:
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgt 217  Q
    ||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||| ||||    
T  15113185 tctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcatcctgt 15113248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 317
Target Start/End: Complemental strand, 2832178 - 2832023
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||| |      |||||||||||| |||||||| |||| |||||     
T  2832178 tcaactcataacaactcgtgcgacaaggatcacatttaacctaaacaagacattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggt 2832079  T
Q  260 gagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcatc 317  Q
    |||| || |||||| || | ||||| ||| | | | |||||| |||||||||||||||    
T  2832078 gagttca-gtcagattctccaaagttcattcta-agtctttctaggttcaatctcatc 2832023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 12901412 - 12901679
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatatcatca-acataaatcatacaatgtttatacacttatataacatcaacaacatcattggattata 99  Q
    |||||||||||| |||||||  || |||| ||| | ||||| |||||| ||||  ||||| ||||||  |||||||||| ||||||| ||||  || |||    
T  12901412 tataacaatatcaaatgcaaaacagcaacatcacaacatcatacataattcatgtaatgtatatacaactatataacattaacaacaacattaaatcata 12901511  T
Q  100 cgattcaggcttactagaacgtcaacaacaagctagacaacttagtc-ccta---aaatctaagatcaactcacaacaactcgtgcgacaaggatcacat 195  Q
      ||||| |||||||  |||  |||||||||| || ||||||||||  ||||   |  || |||||||||||||| |||||||| ||||||   ||||||    
T  12901512 taattcaagcttactgaaacaacaacaacaagataaacaacttagtttcctacgtacctccaagatcaactcacatcaactcgtacgacaaatgtcacat 12901611  T
Q  196 ttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    ||||||||||||||  || ||||  |||  | |||| |||||| |||||||||||||  |||||||||    
T  12901612 ttaacctaacaaggtgttttgtaaatggacaactcgtgaggcgagagcctctactcgctatggcgagt 12901679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 124 - 263
Target Start/End: Complemental strand, 28505210 - 28505071
Alignment:
Q  124 acaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttgg 223  Q
    |||||||| || ||||||||||  ||||  ||||||||||||||||| |||||||  |||||| |||| |||| ||||||| |||||||||||||         
T  28505210 acaacaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattcaacctaaaaaggcattctgtaacaca 28505111  T
Q  224 ttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
       |||||||||||| |||||||| |||| ||||||||||    
T  28505110 aacgctcgcgaggcgagagcctctgctcgccatggcgagt 28505071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 39267519 - 39267416
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||| |      |||| ||||||| |||||||| |||| ||||||    
T  39267519 tcaactcataacaactcgtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagtgctcccgaggcgagagcctctgctcgccatggc 39267420  T
Q  260 gagt 263  Q
    ||||    
T  39267419 gagt 39267416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 317
Target Start/End: Original strand, 9509476 - 9509593
Alignment:
Q  201 ctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatctt 299  Q
    ||||||||||| ||||| | ||| |  ||||||||||| |||||||| |||| | |||||||| |||||||||||| || ||| | ||| | | ||||||    
T  9509476 ctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctcctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctt 9509575  T
Q  300 tccaggttcaatctcatc 317  Q
    ||||||||||||||||||    
T  9509576 tccaggttcaatctcatc 9509593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 15754799 - 15754703
Alignment:
Q  123 aacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgta 218  Q
    |||| |||| || ||||||||||  ||||  |||| |||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||| ||||    
T  15754799 aacagcaagataaacaacttagtttctaacctctaggatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattatgta 15754703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 316
Target Start/End: Original strand, 38227765 - 38227883
Alignment:
Q  198 aacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataat 296  Q
    |||||||||||||| ||||| | ||| |  ||||||||||| |||||||| |||| | |||||||| ||||||||||||  ||||| | ||| | | |||    
T  38227765 aacctaacaaggcactctgtttatgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccaaaaagtttcattcta-aat 38227863  T
Q  297 ctttccaggttcaatctcat 316  Q
    ||||||||||||||||||||    
T  38227864 ctttccaggttcaatctcat 38227883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 11995909 - 11995845
Alignment:
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgta 218  Q
    |||||||| |||||||| |||||||  |||||| |||| |||||||||||| |||||||||||||    
T  11995909 tctaagataaactcacatcaactcgaacgacaaagatcgcatttaacctaaaaaggcattctgta 11995845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 34200994 - 34201089
Alignment:
Q  123 aacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgta 218  Q
    |||| |||| || ||||||||||  ||||  ||||||||||||||||| |||||||   |||| ||||| |||||||||||| |||||||| ||||    
T  34200994 aacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaatgacagggatcgcatttaacctaaaaaggcattatgta 34201089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 2529926 - 2529868
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacctaa-caaggcattctgta 218  Q
    |||||||| ||||||||||||||||| |||| ||||||||||||  |||||||||||||    
T  2529926 tcaactcataacaactcgtgcgacaaagatcgcatttaacctaattaaggcattctgta 2529868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 9751423 - 9751365
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgta 218  Q
    |||||||| ||||||||||||||||| |||| ||||||| || ||||||||||||||||    
T  9751423 tcaactcataacaactcgtgcgacaaagatcgcatttaaactaaacaaggcattctgta 9751365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 20220063 - 20220005
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgt 217  Q
    ||||| |||||| ||||||||||||||| | ||||||||| |||||||||| |||||||    
T  20220063 gatcacctcacatcaactcgtgcgacaaaggtcacatttatcctaacaaggtattctgt 20220005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 317
Target Start/End: Complemental strand, 3564198 - 3564081
Alignment:
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctt 299  Q
    |||||||||||| ||||| | ||| |  ||||||||||| |||| | | ||||   |||||||| ||||||||| |  ||||||| ||| | | ||||||    
T  3564198 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcatttgctcgctgtggcgagttcaggtcagatttccaaaagttcattctacaatctt 3564099  T
Q  300 tccaggttcaatctcatc 317  Q
    ||||||||||||||||||    
T  3564098 tccaggttcaatctcatc 3564081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 316
Target Start/End: Complemental strand, 17061766 - 17061678
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcat 316  Q
    ||||||||||| ||||||||||||| ||| |||||| ||||||||| || ||||  |  || | | ||||| |||||||||||||||||    
T  17061766 ctcgcgaggcgagagcctctactcgccatcgcgagttcaggtcagattctcaaagttttattctaaaatctatccaggttcaatctcat 17061678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 316
Target Start/End: Original strand, 44116820 - 44116907
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcat 316  Q
    ||||||||||| |||||||| |||| |||||||||| ||||||||| || ||||  | ||| | | ||||||||| |||||||||||||    
T  44116820 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattcta-aatctttccgggttcaatctcat 44116907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 26212310 - 26212356
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaa 274  Q
    ||||||||||| ||||||||||||| | |||||||| ||||||||||    
T  26212310 ctcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaa 26212356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 12756522 - 12756478
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcag 272  Q
    ||||||||||| ||||||||||||| ||||| |||| ||||||||    
T  12756522 ctcgcgaggcgagagcctctactcgccatggtgagttcaggtcag 12756478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 40443703 - 40443751
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    ||||||||||| |||||||| |||| | |||||||| ||||||||||||    
T  40443703 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatc 40443751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 13026 - 13296
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatat-catcaa-cataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| |||||||| |||||  |||||| ||||| || |  ||||| |||||| ||||||||||| | ||||| |||| ||||||    
T  13026 tataacaatatcgaatgcaagtcatcaacatcataaacatcaaacataattcgtgtaatgtatatacaattatataacattagcaacaacattagattat 13125  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
     | |||||||||||||  |||  ||||| |||| || | ||||||||  ||||  || | |||||||||||| ||||||||| ||||| |||||||||||    
T  13126 ccaattcaggcttactgaaacaacaacagcaagataaataacttagtttctaatctccatgatcaactcacatcaactcgtgtgacaaagatcacattta 13225  T
Q  199 acctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||||||||||||||||||||  |||||||||||||||||| | ||||||||||| |||||||||| |||||    
T  13226 acctaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagttcaggt 13296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 18111 - 18053
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgt 217  Q
    ||||| |||||| ||||||||||||||| | |||||||||||||||||||| |||||||    
T  18111 gatcatctcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtattctgt 18053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 3e-48; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 21161802 - 21161939
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  21161802 tataacaatatcgaatgcaattcatcaacttcatatcatcaacataaatcatacaatgtttatacacttatataacatcaacgacatcattggattaaac 21161901  T
Q  101 gattcaggcttactagaacgtcaacaacaagctagaca 138  Q
     | | ||||| ||| |||| |||||| ||||| |||||    
T  21161902 aaattaggctcactggaacatcaacagcaagccagaca 21161939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 38 - 262
Target Start/End: Original strand, 49261465 - 49261690
Alignment:
Q  38 atcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagac 137  Q
    |||||||||| | ||| ||||| |||||| ||||||||||| | || || |||| || ||||| |||| |||||||| ||| | ||||| |||| || |     
T  49261465 atcaacataatttatataatgtatatacaattatataacattatcatcaacattagaatatacaattccggcttactggaaggacaacatcaaggtaaat 49261564  T
Q  138 aacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgagg 236  Q
    ||||||||  ||||  || |||||||||||||| ||||||||||||||| |||| | |||||||| ||||||||||||||||  ||||||||||||||||    
T  49261565 aacttagtttctaacctccaagatcaactcacatcaactcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgagg 49261664  T
Q  237 cgggagcctctactcgtcatggcgag 262  Q
    || ||||||||| ||| |||||||||    
T  49261665 cgagagcctctattcgccatggcgag 49261690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 22921903 - 22921638
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttc--atatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| ||| |||| ||  | || ||||||| || ||||| ||||| |||||| ||||||||||| ||||||| |||| ||| ||    
T  22921903 tataacaatatcgaatgcaaatcaacaacatctcaaat-atcaacaaaattcatataatgtatatacaattatataacattaacaacaacattagatcat 22921805  T
Q  99 acga-ttcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattt 197  Q
    |  | ||||||||||||  |||  ||||| |||| || ||||||||||  ||||  ||||||||||||||||| ||||||||||||||| |||| |||||    
T  22921804 attaattcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcattt 22921705  T
Q  198 aa-cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    || || ||||||||||||||||  | |  || |||||||||| ||||||||||||| ||||||||||    
T  22921704 aacccaaacaaggcattctgtaactaggcagttcgcgaggcgagagcctctactcgccatggcgagt 22921638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 38 - 269
Target Start/End: Complemental strand, 35981683 - 35981451
Alignment:
Q  38 atcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagac 137  Q
    |||||||||| ||||| ||||| ||| || ||||||||||| | || || |||| || ||||| || |||||||||| ||| | ||||| |||| || |     
T  35981683 atcaacataattcatataatgtatatgcaattatataacattatcatcaacattagaatatacaatccaggcttactggaatgacaacatcaagataaat 35981584  T
Q  138 aacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgagg 236  Q
    ||||||||  ||||  || |||||||||||||| ||| ||||||||||| |||| | |||||||| ||||||||||||||||  | ||||||||||||||    
T  35981583 aacttagtttctaacctccaagatcaactcacatcaattcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactagttagctcgcgagg 35981484  T
Q  237 cgggagcctctactcgtcatggcgagtacaggt 269  Q
    || ||||||||||||  |||||||||| |||||    
T  35981483 cgagagcctctactcaccatggcgagttcaggt 35981451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 136 - 316
Target Start/End: Complemental strand, 52927879 - 52927699
Alignment:
Q  136 acaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgag 235  Q
    ||||||||||  ||||  ||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||  |||| |  |||||||    
T  52927879 acaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaacaaggcattctgtaactggtcaattcgcgag 52927780  T
Q  236 gcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcat 316  Q
    ||| | ||||||||||| |||||||||| ||||||  | |   |||| | ||| ||| |||||||||||||||||||||||    
T  52927779 gcgagggcctctactcgccatggcgagttcaggtctaactttaaaaaattcattccaaaatctttccaggttcaatctcat 52927699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 41 - 269
Target Start/End: Original strand, 20636977 - 20637206
Alignment:
Q  41 aacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagacaac 140  Q
    ||||||| ||||| ||||| |||||| ||||||||||| | || || ||||  |  |||| ||||||||||||| ||| | ||||| |||| || | |||    
T  20636977 aacataattcatataatgtatatacaattatataacattatcatcaacattaaaaaatacaattcaggcttactggaatgacaacatcaaggtaaataac 20637076  T
Q  141 ttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgg 239  Q
    |||||  ||||  || |||||||||||||| |||||| |||||||| |||| | |||||||||| |||| |||||||||  || |||||||||||||||     
T  20637077 ttagtttctaacctccaagatcaactcacatcaactcatgcgacaaagatcgcttttaacctaaacaagacattctgtaactgattagctcgcgaggcga 20637176  T
Q  240 gagcctctactcgtcatggcgagtacaggt 269  Q
    ||||||||||||| |||||||||| |||||    
T  20637177 gagcctctactcgccatggcgagttcaggt 20637206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 104 - 316
Target Start/End: Original strand, 33681199 - 33681412
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaaccta 203  Q
    |||| |||||||||||  |||||||||| || ||||||||||  ||||  ||||||||||||||||| ||||||||| ||||| |||| |||||||| ||    
T  33681199 tcagtcttactagaacaacaacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgtgacaaagatcgcatttaacata 33681298  T
Q  204 a-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttcc 302  Q
    | ||||||| ||||||  ||| ||  |||||||||| |||||||| |||| |||||||||| |||||   | |||||||| | ||| | | |||||||||    
T  33681299 agcaaggcactctgtaactgggtaattcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaactcacaaaaattcattctaaaatctttcc 33681398  T
Q  303 aggttcaatctcat 316  Q
    ||||||||||||||    
T  33681399 aggttcaatctcat 33681412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 269
Target Start/End: Original strand, 21161937 - 21162121
Alignment:
Q  84 acatcattggattatacgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcga 183  Q
    |||||||||||||| || | | ||||| ||| |||| |||||| ||||| || ||||| ||| | |   ||||||||||| ||||||||||||| |||||    
T  21161937 acatcattggattaaacaaattaggctcactggaacatcaacagcaagccaggcaactgagttcttgtcatctaagatcatctcacaacaactcatgcga 21162036  T
Q  184 caaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    |||||||||||  |||||  |||||||||||||  |  || | |||||||||||| |||||||| |||| ||||||||||||||||    
T  21162037 caaggatcaca-ctaaccctacaaggcattctggttcagggttgctcgcgaggcgagagcctctgctcgccatggcgagtacaggt 21162121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 316
Target Start/End: Original strand, 22237852 - 22238032
Alignment:
Q  136 acaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcga 234  Q
    ||||||||||  ||||  ||||||||||||||||| |||||||||||| || |||| |||||||||| ||||||||||||||||  | || |  ||||||    
T  22237852 acaacttagtttctaacctctaagatcaactcacatcaactcgtgcgaaaaagatcgcatttaacctaaacaaggcattctgtaactagtcaattcgcga 22237951  T
Q  235 ggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcat 316  Q
    |||| | ||||||||||| |||||||||| || ||   | |||||||| | ||| ||| |||||||||||||| ||||||||    
T  22237952 ggcgagggcctctactcgccatggcgagttcaagtgcaactcacaaaa-ttcattccaaaatctttccaggtttaatctcat 22238032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 21896169 - 21896078
Alignment:
Q  122 caacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcatt 213  Q
    |||||||||| || ||||||||||  || | |||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||    
T  21896169 caacaacaagataaacaacttagtttcttacatctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcatt 21896078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 21754259 - 21754341
Alignment:
Q  136 acaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgta 218  Q
    ||||||||||  ||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  21754259 acaacttagtttctaacctctgagatcaactcacatcaactcgtgcgacaaggatcacatttaacctaacaaggcagtctgta 21754341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 269
Target Start/End: Original strand, 20248517 - 20248633
Alignment:
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaac-aaggcattctgtatttggttagctcgcgaggcgggagcctctactcg 252  Q
    ||||||||||| | ||| ||||| |||||||||| ||| ||||||||||||  |||||||||||||  | ||||||||||||||||  ||||||||||||    
T  20248517 tctaagatcaatttacatcaacttgtgcgacaagaatcgcatttaacctaaataaggcattctgtaactagttagctcgcgaggcgatagcctctactcg 20248616  T
Q  253 tcatggcgagtacaggt 269  Q
     |||||||||| |||||    
T  20248617 ccatggcgagttcaggt 20248633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 12271789 - 12271852
Alignment:
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgt 217  Q
    ||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||    
T  12271789 tctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcattctgt 12271852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 21861448 - 21861385
Alignment:
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgt 217  Q
    ||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||    
T  21861448 tctaagatcaactcacatcaactcgtgcgacaaatgtcacatttaacctaacaaggcattctgt 21861385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 161 - 269
Target Start/End: Complemental strand, 28194322 - 28194213
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| |||| | |||||||||| |||| ||| |||||||| |||| |||| ||||  ||| |||||||||||||| ||||||||||| | ||||||    
T  28194322 tcaactcataacatcacgtgcgacaaagatcgcatgtaacctaaacaagacattttgtaaatgggtagctcgcgaggcgagagcctctacttgccatggc 28194223  T
Q  260 gagtacaggt 269  Q
    |||| |||||    
T  28194222 gagttcaggt 28194213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 316
Target Start/End: Original strand, 433322 - 433410
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcat 316  Q
    ||||||||||| |||||||| |||| |||||||||| ||||||||| || ||||  | ||| | | |||||||||||||||||||||||    
T  433322 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcat 433410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 16368160 - 16368110
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaagg 209  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||||||||    
T  16368160 gatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 16368110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 263
Target Start/End: Original strand, 20918798 - 20918952
Alignment:
Q  109 cttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaag 208  Q
    |||||| |||| | ||||||||| || || |||||||  ||||  ||||||||||||||||| ||| |||  |||||| |||| |||| ||||||| |||    
T  20918798 cttactggaacattaacaacaaggtaaacgacttagtttctaacctctaagatcaactcacatcaagtcgaacgacaaagatcgcattcaacctaaaaag 20918897  T
Q  209 gcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    ||||||| ||       ||||||||||||| |||||||| |||| ||||||||||    
T  20918898 gcattctttaacacacaagctcgcgaggcgagagcctctgctcgccatggcgagt 20918952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 317
Target Start/End: Original strand, 34510095 - 34510184
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcatc 317  Q
    |||| |||||| |||||||| |||| | |||||||| ||||||||| |  ||||||| ||| | | ||||||||||||||||||||||||    
T  34510095 ctcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatc 34510184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 50210047 - 50209931
Alignment:
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatct 298  Q
    |||||||||||| ||||| | ||| |  ||||||||||| |||||||| |||| | |||||||| |||||||||||  |||||| | ||| | | |||||    
T  50210047 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagtttcattcta-aatct 50209949  T
Q  299 ttccaggttcaatctcat 316  Q
    ||||||||||||||||||    
T  50209948 ttccaggttcaatctcat 50209931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 198 - 317
Target Start/End: Complemental strand, 22354409 - 22354289
Alignment:
Q  198 aacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataat 296  Q
    ||||||||||| || ||||| | ||| |  || |||||||| ||||||||||||| | |||||||| |||||||||||| || ||| | ||| | | |||    
T  22354409 aacctaacaagtcactctgtttctgggtcacttgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaat 22354310  T
Q  297 ctttccaggttcaatctcatc 317  Q
    || ||||||||||||||||||    
T  22354309 ctatccaggttcaatctcatc 22354289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 50686860 - 50686963
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatgg 258  Q
    |||||||||||  ||||||||||||||| | ||||||||| |||||||||| ||||||| |       |||||||||||| |||||||||||||  ||||    
T  50686860 gatcaactcacgtcaactcgtgcgacaaaggtcacatttatcctaacaaggtattctgtctcacaggggctcgcgaggcgagagcctctactcgctatgg 50686959  T
Q  259 cgag 262  Q
    ||||    
T  50686960 cgag 50686963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 41049909 - 41049851
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgt 217  Q
    |||||||||||| |||||| |||||||| | |||||| ||||||||||||| |||||||    
T  41049909 gatcaactcacatcaactcatgcgacaaaggtcacatataacctaacaaggtattctgt 41049851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 50613990 - 50613940
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaagg 209  Q
    |||||| ||||| ||||||||||||||| | ||||||||||||||||||||    
T  50613990 gatcaattcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 50613940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 50621818 - 50621768
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaagg 209  Q
    |||||| ||||| ||||||||||||||| | ||||||||||||||||||||    
T  50621818 gatcaattcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 50621768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 317
Target Start/End: Original strand, 22532556 - 22532673
Alignment:
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctt 299  Q
    ||||||||| || ||||| ||||| |  ||||||||||| |||||||| |||  | |||||||| || |||||| |  ||||||| ||| | | |||| |    
T  22532556 cctaacaagtcactctgtttttgggtcactcgcgaggcgagagcctctgctcaccgtggcgagttcaagtcagatttccaaaagttcattctacaatcct 22532655  T
Q  300 tccaggttcaatctcatc 317  Q
    ||||||||||||||||||    
T  22532656 tccaggttcaatctcatc 22532673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 38801198 - 38801150
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    ||||||||||| ||||||||||||| | |||||||| ||||||||||||    
T  38801198 ctcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatc 38801150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 27250536 - 27250488
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    ||||||||||| |||||||| |||| | |||||||| ||||||||||||    
T  27250536 ctcgcgaggcgagagcctctgctcgacgtggcgagttcaggtcagaatc 27250488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 6520455 - 6520725
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatat-catcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattata 99  Q
    |||||||||||||||||||| |||||||| |||||  ||||||||||| ||||  ||||| |||||| ||||||||||| | ||||| |||| |||||||    
T  6520455 tataacaatatcgaatgcaagtcatcaacatcataaacatcaacataattcatgtaatgtatatacaattatataacattagcaacaacattagattata 6520554  T
Q  100 cgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaa 199  Q
    | |||||||||||||  |||  ||||| |||| || | ||||||||  ||||  || |||||||||||||| |||||| ||| |||| |||| |||||||    
T  6520555 caattcaggcttactgaaacaacaacagcaagataaataacttagtttctaacctccaagatcaactcacatcaactcatgcaacaaagatcgcatttaa 6520654  T
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtc 270  Q
    |||||||| |||||||||| ||||  || | |||||||| | ||||||||||| |||||||| | ||||||    
T  6520655 cctaacaaagcattctgtaattgggcagtttgcgaggcgagggcctctactcgccatggcgaattcaggtc 6520725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 38855285 - 38855015
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttc--atatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| ||| |||| ||  | || |||||||||| ||||| ||||| |||||| ||||||||||| | ||||| |||| ||||||    
T  38855285 tataacaatatcgaatgcaaatcaacaacatctcaaat-atcaacataattcatataatgtatatacaattatataacattagcaacaacattagattat 38855187  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    || |||||||||||||  |||  ||||| |||| || |||||||||| |||||  || |||||||| ||||| ||||||||||||||| ||||   ||||    
T  38855186 acaattcaggcttactgaaacaacaacagcaagataaacaacttagttcctaatgtccaagatcaattcacatcaactcgtgcgacaaagatcgtgttta 38855087  T
Q  199 acctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    |||||| ||||||||||||||  |||  |  |||||||||| | ||||||||||| |||||||||| |||||    
T  38855086 acctaagcaaggcattctgtaactgggcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 38855015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 104 - 315
Target Start/End: Complemental strand, 26355629 - 26355417
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct- 202  Q
    |||| |||||||||||   ||||| ||| || ||||||||||  ||||  ||||||||||||||||| ||||| ||||||||| |||| |||||||| |     
T  26355629 tcagtcttactagaacaataacaaaaagataaacaacttagtttctaacctctaagatcaactcacatcaacttgtgcgacaaagatcgcatttaacata 26355530  T
Q  203 aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttcc 302  Q
    ||||||||||||||||  | ||||||||| |||||| ||||||||||||| |||||| ||| |||||   | |||||||| | ||| | | | |||||||    
T  26355529 aacaaggcattctgtaactagttagctcgtgaggcgagagcctctactcgccatggcaagttcaggtacaattcacaaaaattcattctaaagtctttcc 26355430  T
Q  303 aggttcaatctca 315  Q
    |||||||||||||    
T  26355429 aggttcaatctca 26355417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 269
Target Start/End: Original strand, 21285740 - 21285954
Alignment:
Q  55 aatgtttatacacttatataacatcaacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaat 154  Q
    ||||| |||||| ||||||| ||| |||||||  ||| |||||||  |||||||||||||  |||  |||||||||| || |  |||||||  || |  |    
T  21285740 aatgtatatacaattatatatcattaacaacaatattagattatataattcaggcttactgaaacaacaacaacaagataaagcacttagtttcttacct 21285839  T
Q  155 ctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtc 254  Q
    |||||||||||||||| |||||||||||| || |||| ||||||||||||||| ||||||||||  |||  | || |||||||| | ||||||||||| |    
T  21285840 ctaagatcaactcacatcaactcgtgcgataaagatcgcatttaacctaacaaagcattctgtaactgggcaacttgcgaggcgagggcctctactcgcc 21285939  T
Q  255 atggcgagtacaggt 269  Q
    || |||||| |||||    
T  21285940 atagcgagttcaggt 21285954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 269
Target Start/End: Complemental strand, 23760840 - 23760605
Alignment:
Q  38 atcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacg-attcaggcttact---agaacgtcaacaacaagct 133  Q
    |||||||||| ||||| ||||| |||||| ||||||| ||| ||||||| |||| ||| |||   |||||||||||||   | |||  |||||||||| |    
T  23760840 atcaacataattcatataatgtatatacaattatataccattaacaacaacattagatcatatttattcaggcttactgaaacaacaacaacaacaaggt 23760741  T
Q  134 agacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcg 233  Q
    | ||||||||||   |||  ||||||||||||||||| ||||| ||||||||| |||| |||||| |||||||||||||| ||||  | || |  |||||    
T  23760740 aaacaacttagtttttaacctctaagatcaactcacatcaacttgtgcgacaaagatcgcatttatcctaacaaggcattttgtaactagtcaattcgcg 23760641  T
Q  234 aggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||||| | ||||||||||| | |||| ||| |||||    
T  23760640 aggcgagggcctctactcgccttggcaagttcaggt 23760605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 21673791 - 21674108
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttc--atatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| ||| |||| ||  | || ||||| |||| | ||  ||||| |||||| ||||||| ||| ||||||| |||| ||| ||    
T  21673791 tataacaatatcgaatgcaaatcaacaacatctcaaat-atcaatataatttatttaatgtatatacaattatataccattaacaacaacattagatcat 21673889  T
Q  99 acga-ttcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattt 197  Q
    |  | |||| |||||||  |||  |||||||||| || ||||||||||   |||  ||||| |||||||||||  |||| ||||||||| |||| |||||    
T  21673890 attaattcaagcttactgaaacaacaacaacaagata-acaacttagtttttaacctctaatatcaactcacattaacttgtgcgacaaagatcgcattt 21673988  T
Q  198 aacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataat 296  Q
    | ||| ||||||||||||||||    || |  |||||||||| | ||||||||||| |||||||||| |||||   | |||||||  | ||| | | |||    
T  21673989 atcctaaacaaggcattctgtaacaagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcacaaatattcattctaaaat 21674088  T
Q  297 ctttccaggttcaatctcat 316  Q
    ||||||||||||||||||||    
T  21674089 ctttccaggttcaatctcat 21674108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 161 - 317
Target Start/End: Original strand, 23406630 - 23406785
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcg 260  Q
    ||||||| ||| ||||||||| |||| | |||||   |||||||||||||| ||||| | ||| |  ||||||||||| ||||||||||||| | |||||    
T  23406630 tcaactctcaataactcgtgcaacaaaggtcacaa--aacctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcg 23406727  T
Q  261 agtacaggtcagaatcacaaaag-tccatcccataatctttccaggttcaatctcatc 317  Q
    ||| |||||||||||| || ||| | ||| | | ||||||||||||| ||||||||||    
T  23406728 agttcaggtcagaatcccacaagtttcattctacaatctttccaggtccaatctcatc 23406785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 317
Target Start/End: Complemental strand, 18879071 - 18878954
Alignment:
Q  201 ctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatctt 299  Q
    ||||||||||| ||||| | ||| |  ||||||||||| |||||||| |||||| |||||||| |||||||||||| || ||| | ||| | | ||||||    
T  18879071 ctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgtcttggcgagttcaggtcagaatcccacaagtttcattctacaatctt 18878972  T
Q  300 tccaggttcaatctcatc 317  Q
    ||||||||||||||||||    
T  18878971 tccaggttcaatctcatc 18878954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 39834079 - 39834188
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| |||| | |||| ||||| |||| |||||||| ||| ||||| ||||||||  ||| |||||||||||||| ||||||||||||| ||||||    
T  39834079 tcaactcataacatcacgtgggacaaagatcgcatttaacttaaacaaggtattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggc 39834178  T
Q  260 gagtacaggt 269  Q
    |||| |||||    
T  39834179 gagttcaggt 39834188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 104 - 263
Target Start/End: Complemental strand, 5866206 - 5866047
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaaccta 203  Q
    |||| |||||| |||| | |||| |||| || ||||||||||  ||||  ||||||||||||||||| |||||||  |||||| |||| |||| ||||||    
T  5866206 tcagtcttactggaacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattcaaccta 5866107  T
Q  204 acaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    | |||||||||||||        |||||||||||| |||||||| |||| ||||||||||    
T  5866106 aaaaggcattctgtaacacaaacgctcgcgaggcgagagcctctgctcgccatggcgagt 5866047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 263
Target Start/End: Original strand, 21255443 - 21255570
Alignment:
Q  136 acaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgag 235  Q
    |||||||||| |||||  |||||||| |||||||| |||||||  |||||| |||| |||||||||||| ||||||||||||| |      |||||||||    
T  21255443 acaacttagttcctaacctctaagataaactcacatcaactcgaacgacaaagatcgcatttaacctaaaaaggcattctgtaatacaaatgctcgcgag 21255542  T
Q  236 gcgggagcctctactcgtcatggcgagt 263  Q
    ||| ||||| || |||| ||||||||||    
T  21255543 gcgagagccgctgctcgccatggcgagt 21255570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 263
Target Start/End: Original strand, 20498808 - 20498914
Alignment:
Q  157 aagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcat 256  Q
    |||||||||||||| ||||||||| ||||| | ||||| | ||||||||||||  |||||| | |  | ||||||||||||| |||||||||||||  ||    
T  20498808 aagatcaactcacatcaactcgtgtgacaaaggtcacaataaacctaacaaggtgttctgtctctcatgagctcgcgaggcgagagcctctactcgctat 20498907  T
Q  257 ggcgagt 263  Q
    |||||||    
T  20498908 ggcgagt 20498914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 317
Target Start/End: Original strand, 20536522 - 20536612
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatctttccaggttcaatctcatc 317  Q
    ||||||||||| ||||||||||||| | |||||||| |||||||||||| || ||| | ||| | | ||||||||||||||||||||||||    
T  20536522 ctcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccataagtttcattctacaatctttccaggttcaatctcatc 20536612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 316
Target Start/End: Original strand, 41598499 - 41598587
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcat 316  Q
    ||||||||||| |||||||| |||| |||||||||| ||||||||| || ||||  | ||| | | |||||||||||||||||||||||    
T  41598499 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcat 41598587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 263
Target Start/End: Original strand, 21249605 - 21249732
Alignment:
Q  136 acaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgag 235  Q
    |||||||||| |||||  |||||||| |||||||| ||||| |  |||||| |||| |||||||||||| |||||||||||||        |||||||||    
T  21249605 acaacttagttcctaacctctaagataaactcacatcaacttgaacgacaaagatcgcatttaacctaaaaaggcattctgtaacacaaatgctcgcgag 21249704  T
Q  236 gcgggagcctctactcgtcatggcgagt 263  Q
    ||| |||||||| |||| ||||||||||    
T  21249705 gcgagagcctctgctcgccatggcgagt 21249732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 22364909 - 22364959
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaagg 209  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||||||||    
T  22364909 gatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 22364959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 310
Target Start/End: Original strand, 22875380 - 22875462
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaa 310  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||||| || ||||  | ||| | | |||||||||||||||||    
T  22875380 ctcgcgaggcgagagcctctgctcgtcatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaa 22875462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 24353271 - 24353329
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgt 217  Q
    |||||||||||| ||||||||||||||| | ||||||||| |||||||||| |||||||    
T  24353271 gatcaactcacatcaactcgtgcgacaaaggtcacatttatcctaacaaggtattctgt 24353329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 263
Target Start/End: Original strand, 17141105 - 17141264
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaaccta 203  Q
    |||| |||||| |||| | |||| |||| || ||||||||||  ||||  ||||||||||||||||| |||||||   ||||| |||| |||| ||||||    
T  17141105 tcagtcttactggaacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaatgacaaagatcgcattcaaccta 17141204  T
Q  204 acaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    | ||||| |||||||        |||||||||||| |||||||| |||| ||||||||||    
T  17141205 aaaaggcgttctgtaacacaaacgctcgcgaggcgagagcctctgctcgccatggcgagt 17141264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 17266866 - 17266816
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaagg 209  Q
    |||||||||||| |||||||||||| || | ||||||||||||||||||||    
T  17266866 gatcaactcacatcaactcgtgcgataaaggtcacatttaacctaacaagg 17266816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 317
Target Start/End: Complemental strand, 18818281 - 18818127
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcg 260  Q
    ||||||| ||||||||||||| |||| | || ||   ||||||||||| || ||||| | ||| |  ||||||||||| |||||||| |||| | |||||    
T  18818281 tcaactctcaacaactcgtgcaacaaaggtcgcaa--aacctaacaagacactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcg 18818184  T
Q  261 agtacaggtcagaatcacaaaag-tccatcccataatctttccaggttcaatctcatc 317  Q
    ||| |||||||||| | |||||| | |||   | ||||||||||||||||||||||||    
T  18818183 agttcaggtcagaaac-caaaagtttcattttacaatctttccaggttcaatctcatc 18818127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 21491184 - 21491298
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaaccta 203  Q
    |||| |||||| |||| | |||| |||| || ||||||||||  ||||  |||||||||||||||||  ||||||  | |||| |||| |||| ||||||    
T  21491184 tcagtcttactggaacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacattaactcgaactacaaagatcgcattcaaccta 21491283  T
Q  204 acaaggcattctgta 218  Q
    | |||||||||||||    
T  21491284 aaaaggcattctgta 21491298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 21918807 - 21918759
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    ||||||||||| |||||||| |||| |||||||||| ||||||||||||    
T  21918807 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatc 21918759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 25362943 - 25362899
Alignment:
Q  232 cgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    ||||||| |||||||| |||| |||||||||| ||||||||||||    
T  25362943 cgaggcgagagcctctgctcgccatggcgagttcaggtcagaatc 25362899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 39706322 - 39706052
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatat-catcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattata 99  Q
    |||||||||||||||||||| |||| ||| |||||  ||||||||||| ||||  ||||| |||||| ||||||||||| | ||||| |||| ||| |||    
T  39706322 tataacaatatcgaatgcaagtcatgaacatcataaacatcaacataattcatgtaatgtatatacaattatataacattagcaacaacattagatcata 39706223  T
Q  100 cgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaa 199  Q
      |||||||||||||| |||  ||||| |||| || |||||||| | |||||  || |||||||||||||| ||||||||||||||| |||| |||||||    
T  39706222 taattcaggcttactaaaacaacaacagcaagataaacaacttaattcctaatctccaagatcaactcacatcaactcgtgcgacaaagatcgcatttaa 39706123  T
Q  200 cct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||| ||||| ||||||||||  |||  || |||||||||| | ||||||||||| |||||||||| |||||    
T  39706122 cctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggt 39706052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 38 - 267
Target Start/End: Original strand, 15190441 - 15190671
Alignment:
Q  38 atcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagac 137  Q
    |||||||||| ||||| ||||| |||||| ||||||||||| | || || |||| || ||||| || |||||||||| ||| | ||||| |||| || |     
T  15190441 atcaacataattcatataatgtatatacaattatataacattatcatcaacattagaatatacaatccaggcttactggaatgacaacatcaaggtaaat 15190540  T
Q  138 aacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaa-caaggcattctgtatttggttagctcgcgagg 236  Q
    ||||||||  ||||   | |||||||||||||| ||||||||||||||| |||| | |||||||||| ||||||||||||||  ||||||||||||||||    
T  15190541 aacttagtttctaacccccaagatcaactcacatcaactcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgagg 15190640  T
Q  237 cgggagcctctactcgtcatggcgagtacag 267  Q
    || ||||||||||||| ||||||||||||||    
T  15190641 cgagagcctctactcgccatggcgagtacag 15190671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 38 - 269
Target Start/End: Original strand, 15099474 - 15099706
Alignment:
Q  38 atcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagac 137  Q
    |||||||||| ||||| ||||| |||||| ||||||||||| | || || |||| || ||||| || |||||||||| ||| | ||||| |||| || |     
T  15099474 atcaacataattcatataatgtatatacaattatataacattatcatcaacattagaatatacaatccaggcttactggaatgacaacatcaaggtaaat 15099573  T
Q  138 aacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgagg 236  Q
    ||||||||  ||||  || |||||||||||||| |||||| |||||||| |||| | |||||||| |||||| |||||||||  ||||||||||||||||    
T  15099574 aacttagtttctaacctccaagatcaactcacatcaactcatgcgacaaagatcgcttttaacctaaacaagacattctgtaactggttagctcgcgagg 15099673  T
Q  237 cgggagcctctactcgtcatggcgagtacaggt 269  Q
    || ||||||||||||| |||||||||| |||||    
T  15099674 cgagagcctctactcgccatggcgagttcaggt 15099706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 316
Target Start/End: Original strand, 8846461 - 8846778
Alignment:
Q  3 taacaatatcgaatgcaattcatcaacttc----atatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||| |||||||| ||    ||||||  ||||||| ||||  ||||| |||||| ||||||||||| |  |||| |||    | ||    
T  8846461 taacaatatcgaatgcaagtcatcaacatctcaaatatca--aacataattcatgtaatgtatatacaattatataacattataaacaacatcaattcat 8846558  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    | |  |||| |||||| ||||  |||| ||||| || ||||||||||  ||||  |||||| |||||||||| ||||||||||||||| |||| ||||||    
T  8846559 atgcatcagtcttactggaacaacaactacaagataaacaacttagtttctaatctctaagttcaactcacatcaactcgtgcgacaaagatcgcattta 8846658  T
Q  199 acct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcac-aaaagtccatcccataat 296  Q
    || | |||||| |||||||||  | |||||||||||||||| ||||||||||||| ||||||||||  ||||   | |||| |||| | ||| | | |||    
T  8846659 acataaacaagacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttaaggtgcaactcacaaaaaattcattctaaaat 8846758  T
Q  297 ctttccaggttcaatctcat 316  Q
    ||||||||||||||||||||    
T  8846759 ctttccaggttcaatctcat 8846778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 12774189 - 12774304
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct- 202  Q
    |||| |||||| ||||  ||||| |||| || ||||||||||  ||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||     
T  12774189 tcagtcttactggaacaacaacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcgcatttaaccta 12774288  T
Q  203 aacaaggcattctgta 218  Q
    ||||||||| ||||||    
T  12774289 aacaaggcagtctgta 12774304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 16596837 - 16596951
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaaccta 203  Q
    |||| |||||| |||| | |||| |||| || ||||||||||  ||||  ||||||||||||||||| |||||||  |||||| ||||||||| ||||||    
T  16596837 tcagtcttacttgaacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcacattcaaccta 16596936  T
Q  204 acaaggcattctgta 218  Q
    | |||||||||||||    
T  16596937 aaaaggcattctgta 16596951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 12288242 - 12287974
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatatcatc-aacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattata 99  Q
    |||||||||||| ||||||||||| |||| ||| | |||| ||||||| ||||  ||||| ||||||  |||||||||| | ||||| ||||  || |||    
T  12288242 tataacaatatcaaatgcaattcaacaacatcacaacatcaaacataattcatgtaatgtatatacaactatataacattaccaacaacattaaatcata 12288143  T
Q  100 cgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaa 199  Q
      |||||||||||||  |||  ||||| |||| || ||||||||||  |  |  || |||||||||||||| |||||  ||||||||   ||||||| ||    
T  12288142 taattcaggcttactgaaacaacaacagcaagataaacaacttagtttcctacctccaagatcaactcacatcaacttatgcgacaaaagtcacattaaa 12288043  T
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacagg 268  Q
    |||||||| |  || ||| | |  | ||||||||||||| |||| ||||||||  ||||||||| ||||    
T  12288042 cctaacaaagtgttatgtctctcttgagctcgcgaggcgagagcttctactcgctatggcgagttcagg 12287974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 13812682 - 13812579
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| ||||||||||||||||| ||||||||||||||| ||||| |||||||||| |      |||||||||||| |||||||| |||| ||||||    
T  13812682 tcaactcataacaactcgtgcgacaaagatcacatttaacctaaacaaagcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggc 13812583  T
Q  260 gagt 263  Q
    ||||    
T  13812582 gagt 13812579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 24028989 - 24029092
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||||| |      |||||||||||| |||||||| |||| ||||||    
T  24028989 tcaactcataacaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggc 24029088  T
Q  260 gagt 263  Q
    ||||    
T  24029089 gagt 24029092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 46640330 - 46640272
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgt 217  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||||||| |||||||    
T  46640330 gatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtattctgt 46640272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 317
Target Start/End: Original strand, 44053116 - 44053233
Alignment:
Q  201 ctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatctt 299  Q
    ||||||||||| ||||| | ||| |  ||||||||||| ||| |||| |||| | |||||||| |||||||||||| || ||| | ||||| ||||||||    
T  44053116 ctaacaaggcactctgtttctgggtcactcgcgaggcgagagtctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcatcctataatctt 44053215  T
Q  300 tccaggttcaatctcatc 317  Q
    | ||||||||||||||||    
T  44053216 tacaggttcaatctcatc 44053233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 276
Target Start/End: Original strand, 12903044 - 12903119
Alignment:
Q  201 ctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    ||||||||||| ||||| | ||| |  ||||||||||||||||||||||||| | |||||||| ||||||||||||    
T  12903044 ctaacaaggcactctgtttctgggtcactcgcgaggcgggagcctctactcgccgtggcgagttcaggtcagaatc 12903119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 316
Target Start/End: Complemental strand, 44928729 - 44928641
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcat 316  Q
    ||||||||||| |||||||| |||| |||||||||| | ||||||| || ||||  | ||| | | |||||||||||||||||||||||    
T  44928729 ctcgcgaggcgagagcctctgctcgccatggcgagttctggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcat 44928641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 53082026 - 53081974
Alignment:
Q  157 aagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaagg 209  Q
    |||||||||||||| |||||||||||||||   ||||||||||||||||||||    
T  53082026 aagatcaactcacatcaactcgtgcgacaaatgtcacatttaacctaacaagg 53081974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 3332133 - 3332236
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||| | |||||||| |||||||| |||| |||||||||| |||||||||||||||| |      |||||||||||| |||||||| |||| ||||||    
T  3332133 tcaactaataacaactcatgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggc 3332232  T
Q  260 gagt 263  Q
    ||||    
T  3332233 gagt 3332236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 20157163 - 20157060
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| ||||||||||||||||| |||| |||||||||| ||||||||| |||||| |      |||||||||||| |||||||| | || ||||||    
T  20157163 tcaactcataacaactcgtgcgacaaagatcgcatttaacctaaacaaggcactctgtaatactagtgctcgcgaggcgagagcctctgcacgccatggc 20157064  T
Q  260 gagt 263  Q
    ||||    
T  20157063 gagt 20157060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 22634086 - 22633983
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| ||||| ||||||||||| |||| |||||||||| ||||||||||||||||        |||||||||||| |||||||| |||| ||||||    
T  22634086 tcaactcataacaaatcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggc 22633987  T
Q  260 gagt 263  Q
    ||||    
T  22633986 gagt 22633983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 15091183 - 15091300
Alignment:
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatct 298  Q
    |||||||||||| ||||| | ||| |  ||||||||||| |||||||| |||| | |||||||| ||||||||| |  |||||| | ||| | | ||||     
T  15091183 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatcc 15091282  T
Q  299 ttccaggttcaatctcat 316  Q
    ||||||||||||||||||    
T  15091283 ttccaggttcaatctcat 15091300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 16377328 - 16377239
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcatc 317  Q
    |||| |||||| |||||||| |||| | |||||||| ||||||||| || ||||||| ||| | |  ||| |||||||||||||||||||    
T  16377328 ctcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagattcccaaaagttcattctacgatcattccaggttcaatctcatc 16377239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 21815461 - 21815393
Alignment:
Q  203 aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcag 272  Q
    |||||||| ||||||| ||||  | ||||||||||| ||||||||||||| |||||||||| ||||||||    
T  21815461 aacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggtcag 21815393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 317
Target Start/End: Original strand, 44102525 - 44102614
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcatc 317  Q
    ||||||||||| |||||||| |||| |||||||||| ||||||||| || ||||  |  || | | ||||| ||||||||||||||||||    
T  44102525 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaagttttattctaaaatctatccaggttcaatctcatc 44102614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 7089191 - 7089239
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    ||||||||||| |||||||| |||| |||||||||| ||||||||||||    
T  7089191 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatc 7089239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 17047879 - 17047831
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    ||||||||||| |||||||| |||| |||||||||| ||||||||||||    
T  17047879 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatc 17047831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 13844852 - 13844895
Alignment:
Q  226 agctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||    
T  13844852 agctcgcgaggcgagagcctctactcgccatggcaagtacaggt 13844895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 13779 - 13697
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaa 186  Q
    |||| |||||| |||| ||||||  ||| || ||||||||||  || |  ||||||||||||||||| |||||||||||||||    
T  13779 tcagtcttactggaacatcaacataaagataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaa 13697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 15552037 - 15552119
Alignment:
Q  136 acaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgta 218  Q
    ||||||||||  ||||  ||||||||||||||||| |||||||  |||||| |||| ||||| |||||| ||| |||| ||||    
T  15552037 acaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattttacctaaaaagacattttgta 15552119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 43198426 - 43198380
Alignment:
Q  162 caactcacaacaactcgtgcgacaaggatcacatttaacctaacaag 208  Q
    ||||||||| ||||||||| ||||| |||| ||||||||||||||||    
T  43198426 caactcacatcaactcgtgtgacaaagatcgcatttaacctaacaag 43198380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 14038935 - 14039052
Alignment:
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatct 298  Q
    |||||||||||| ||||| | ||| |  ||||||||||| |||||||| |||| | |||||||| | ||||||| |  |||||| | ||| | | |||||    
T  14038935 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttctggtcagatttccaaaagtttcattctaaaatct 14039034  T
Q  299 ttccaggttcaatctcat 316  Q
    ||| ||||||||||||||    
T  14039035 ttctaggttcaatctcat 14039052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 21815132 - 21815064
Alignment:
Q  203 aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcag 272  Q
    |||||||| ||||||| ||||  | ||||||||||| ||||||||||||| |||||||||| || |||||    
T  21815132 aacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaagtcag 21815064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 21818554 - 21818486
Alignment:
Q  203 aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcag 272  Q
    |||||||| ||||||| ||||  | ||||||||||| ||||||||||||| |||||||||| || |||||    
T  21818554 aacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaagtcag 21818486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 3096957 - 3097005
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    ||||||||||| |||||||| |||| | |||||||| ||||||||||||    
T  3096957 ctcgcgaggcgagagcctctgctcgccttggcgagttcaggtcagaatc 3097005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 4e-44; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 14234574 - 14234847
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatat-catcaa-cataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| |||||||| |||||  |||||| ||||| ||||  ||||| |||||| ||||||||||| | ||||| |||| |||||     
T  14234574 tataacaatatcgaatgcaagtcatcaacatcataaacatcaaacataattcatgtaatgtatatacaattatataacattagcaacaacattagattaa 14234673  T
Q  99 acgattcaggcttact--agaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatt 196  Q
    || |||||||||||||  | |||  |||||||||| || | ||||||||  ||||  || |||||||||| ||| ||||| || |||||| |||||||||    
T  14234674 acaattcaggcttactgaacaacaacaacaacaagataaataacttagtttctaacctccaagatcaactaacatcaacttgttcgacaaagatcacatt 14234773  T
Q  197 taacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    |||||||| ||||||||||||||  ||||||||| |||||||| | ||||||||||| |||||||||| |||||    
T  14234774 taacctaaacaaggcattctgtaactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggt 14234847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 16097415 - 16097733
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttc----atatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggatt 96  Q
    |||||||||||||||||||| |||||||| ||    ||||||  ||||||| ||||  ||||| |||||| ||||||||||| |  |||| |||    |     
T  16097415 tataacaatatcgaatgcaagtcatcaacatctcaaatatca--aacataattcatgtaatgtatatacaattatataacattataaacaacatcaattc 16097512  T
Q  97 atacgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatt 196  Q
    ||| |  |||| |||||| ||||  ||||| |||| || ||||||||||  ||||  ||||||||||||||||| ||||||||||||||| |||| ||||    
T  16097513 atatgcatcagtcttactggaacaacaacagcaagataaacaacttagtttctaatctctaagatcaactcacatcaactcgtgcgacaaagatcgcatt 16097612  T
Q  197 taacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataa 295  Q
    |||| ||| |||| |||| ||||  | |||||||||||||||| ||||||||||||  |||||||||| ||||||  | |||||||| | ||| | | ||    
T  16097613 taacataaacaagacattttgtaactagttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtccaattcacaaaaattcattctaaaa 16097712  T
Q  296 tctttccaggttcaatctcat 316  Q
    ||||| |||||||||||||||    
T  16097713 tcttttcaggttcaatctcat 16097733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 269
Target Start/End: Complemental strand, 1465406 - 1465174
Alignment:
Q  38 atcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagac 137  Q
    |||||||||| ||||  ||||| |||||| || |||||||| | || || |||| || || || || |||||||||| ||| | || || |||| || |     
T  1465406 atcaacataattcatgtaatgtatatacaattgtataacattatcatcaacattagaataaacaatccaggcttactggaatgacagcatcaaggtaaat 1465307  T
Q  138 aacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaa-caaggcattctgtatttggttagctcgcgagg 236  Q
    ||||||||  ||||  || |||||||||||||| ||||||||||||||| ||| || |||||||||| ||||||||||||||  ||||||||||||||||    
T  1465306 aacttagtttctaacctccaagatcaactcacatcaactcgtgcgacaaagattacttttaacctaaacaaggcattctgtaactggttagctcgcgagg 1465207  T
Q  237 cgggagcctctactcgtcatggcgagtacaggt 269  Q
    || ||||||||||||| |||||| ||| |||||    
T  1465206 cgagagcctctactcgccatggcaagttcaggt 1465174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 15471011 - 15471281
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatat-catcaa-cataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| |||||||| ||  |  |||||| ||||| ||||  ||||| |||||| ||||||||||| ||||||| | || ||| ||    
T  15471011 tataacaatatcgaatgcaagtcatcaacatctcaaacatcaaacataattcatgtaatgtatatacaattatataacattaacaacaac-ttagatcat 15471109  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    |  |||||||||||||  |||  |||||||||| || ||||||||||  ||||  || ||||||| || ||| ||||||||||||||| |||| ||||||    
T  15471110 ataattcaggcttactgaaacaacaacaacaagataaacaacttagtttctaacctccaagatcatctaacatcaactcgtgcgacaaagatcgcattta 15471209  T
Q  199 acct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    |||| ||||| ||||||||||  |||  || || ||||||| | ||||||||||| |||||||||| |||||    
T  15471210 acctaaacaaagcattctgtaactgggcagttcacgaggcgagggcctctactcgccatggcgagttcaggt 15471281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 13210361 - 13210098
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttca-tatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggatt-at 98  Q
    ||||| |||||||||||||| ||| |||||| | |||||  ||||||| ||||  ||||| |||||| ||||||||||| |  | || ||||| ||| ||    
T  13210361 tataataatatcgaatgcaaatcaacaacttaaatatca--aacataagtcatgtaatgtatatacaattatataacattataagcaacattgaattcat 13210264  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    | |  |||| |||||| ||| || ||||||||| || ||||||||||  ||||  |||| |||||||||||| ||||||||||||||| |||||||||||    
T  13210263 atgcatcagccttactggaatgttaacaacaagataaacaacttagtttctaacctctaggatcaactcacatcaactcgtgcgacaaagatcacattta 13210164  T
Q  199 acct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    |||| ||||||||||||||||        |||||||||||| ||||||||||||| ||||||||||    
T  13210163 acctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctactcgccatggcgagt 13210098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 269
Target Start/End: Complemental strand, 12171985 - 12171869
Alignment:
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcg 252  Q
    ||||||||||||||||| ||||| |||||||||| ||| |||||||||||| ||||||||||||||  | ||||| |||||||||| |||||||||||||    
T  12171985 tctaagatcaactcacatcaacttgtgcgacaagaatcgcatttaacctaaacaaggcattctgtaactagttagatcgcgaggcgagagcctctactcg 12171886  T
Q  253 tcatggcgagtacaggt 269  Q
     |||||| ||| |||||    
T  12171885 ccatggccagttcaggt 12171869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 157 - 268
Target Start/End: Complemental strand, 37251043 - 37250932
Alignment:
Q  157 aagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcat 256  Q
    |||||||||||||| ||||||||||||||| | |||| |||||||||||||||  |||||||  |||  | ||||||||||| |||||||||||||  ||    
T  37251043 aagatcaactcacatcaactcgtgcgacaaaggtcacttttaacctaacaaggtgttctgtaactgggcaactcgcgaggcgagagcctctactcgctat 37250944  T
Q  257 ggcgagtacagg 268  Q
    ||||||| ||||    
T  37250943 ggcgagttcagg 37250932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 104 - 204
Target Start/End: Complemental strand, 49389559 - 49389459
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaaccta 203  Q
    |||| |||||| ||||  |||||||||| || ||||||||||  ||||  |||||||||||| |||| |||||||||||||||||||| |||||||||||    
T  49389559 tcagtcttactggaacaacaacaacaagataaacaacttagtttctaacctctaagatcaacacacatcaactcgtgcgacaaggatcgcatttaaccta 49389460  T
Q  204 a 204  Q
    |    
T  49389459 a 49389459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 159 - 269
Target Start/End: Original strand, 324481 - 324591
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatgg 258  Q
    |||||||||||| ||||| || |||||| | ||||||||||||||||||||  |||||||  | | || ||||||||||| |||||||||||||  ||||    
T  324481 gatcaactcacatcaacttgtacgacaaaggtcacatttaacctaacaaggtgttctgtaacttggtaactcgcgaggcgagagcctctactcgctatgg 324580  T
Q  259 cgagtacaggt 269  Q
    ||||| |||||    
T  324581 cgagttcaggt 324591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 1644594 - 1644517
Alignment:
Q  123 aacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaac 200  Q
    ||||||||| || ||||||||||  ||||  ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  1644594 aacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcgcatttaac 1644517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 317
Target Start/End: Complemental strand, 40213555 - 40213438
Alignment:
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctt 299  Q
    |||||||||||| ||||| | ||| |  ||||||||||| |||||||| |||| | |||||||| ||||| ||| || ||||||| ||| | | ||||||    
T  40213555 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagattcccaaaagttcattctacaatctt 40213456  T
Q  300 tccaggttcaatctcatc 317  Q
    ||||||||||||||||||    
T  40213455 tccaggttcaatctcatc 40213438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 12340000 - 12340103
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    ||||||| |||||||||||||||||| ||||||||||||||| ||||||||||| |||| |      |||||||||||| |||||||| |||| ||||||    
T  12340000 tcaactctcaacaactcgtgcgacaaagatcacatttaacctaaacaaggcattatgtaatactagtgctcgcgaggcgagagcctctgctcgccatggc 12340099  T
Q  260 gagt 263  Q
    ||||    
T  12340100 gagt 12340103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 32307891 - 32307974
Alignment:
Q  136 acaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgta 218  Q
    ||||||||||  ||||  ||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||| ||||    
T  32307891 acaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattatgta 32307974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 316
Target Start/End: Complemental strand, 12934209 - 12934028
Alignment:
Q  136 acaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcga 234  Q
    ||||||||||  ||||  ||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||| | ||||||         |||||||    
T  12934209 acaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggaagtctgtaacacaagtactcgcga 12934110  T
Q  235 ggcgggagcctctactcgtcatggcgagtacagg-tcagaatcacaaaagtccatcccataatctttccaggttcaatctcat 316  Q
    |||| ||| |||| |||| |||||||||| |||| ||||  |||||||| | ||| | | |||||||||||||||||||||||    
T  12934109 ggcgagagtctctgctcgccatggcgagttcaggttcag-ttcacaaaatttcattctaaaatctttccaggttcaatctcat 12934028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 316
Target Start/End: Complemental strand, 49667982 - 49667801
Alignment:
Q  136 acaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcga 234  Q
    ||||||||||  ||||  ||||||||||||||||| ||||||||||||||| ||||  ||||||||| ||||||||| ||||||         |||||||    
T  49667982 acaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgtatttaacctaaacaaggcagtctgtaacacaagtactcgcga 49667883  T
Q  235 ggcgggagcctctactcgtcatggcgagtacagg-tcagaatcacaaaagtccatcccataatctttccaggttcaatctcat 316  Q
    |||| |||||||| |||| |||||||||| |||| ||||  |||||| | | ||| | | |||||||||||||||||||||||    
T  49667882 ggcgagagcctctgctcgccatggcgagttcaggttcag-ttcacaatatttcattctaaaatctttccaggttcaatctcat 49667801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 159 - 268
Target Start/End: Complemental strand, 22110225 - 22110116
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatgg 258  Q
    |||||||||||| ||| ||||||||||| | ||||||| ||||||||||||  ||||||   |  | ||||||||||||| |||||||||||||  ||||    
T  22110225 gatcaactcacatcaattcgtgcgacaaaggtcacattaaacctaacaaggtgttctgtccctcttgagctcgcgaggcgagagcctctactcgctatgg 22110126  T
Q  259 cgagtacagg 268  Q
    ||||| ||||    
T  22110125 cgagttcagg 22110116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 25476219 - 25476103
Alignment:
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatct 298  Q
    |||||||||||| ||||| | ||| |  ||||||||||| ||||||||||||||| |||||||| ||||||||| || |||||| | ||| | | |||||    
T  25476219 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagattc-caaaagtttcattctaaaatct 25476121  T
Q  299 ttccaggttcaatctcat 316  Q
    |||||||||| |||||||    
T  25476120 ttccaggttcgatctcat 25476103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 159 - 264
Target Start/End: Original strand, 43927380 - 43927485
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatgg 258  Q
    |||||||||||| ||||||||||||||| | ||||||||| |||||||||| ||||||| |       |||||||||||| |||||||||||||  ||||    
T  43927380 gatcaactcacatcaactcgtgcgacaaaggtcacatttatcctaacaaggtattctgtctcacaagggctcgcgaggcgagagcctctactcgctatgg 43927479  T
Q  259 cgagta 264  Q
    ||||||    
T  43927480 cgagta 43927485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 316
Target Start/End: Complemental strand, 17248092 - 17248004
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcat 316  Q
    ||||||||||| |||||||| |||| |||||||||| ||||||||| || ||||  | ||| | | |||||||||||||||||||||||    
T  17248092 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcat 17248004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 317
Target Start/End: Original strand, 26687171 - 26687291
Alignment:
Q  198 aacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataat 296  Q
    ||||||||||| || ||||| | ||| |  ||||||||||| |||||||| |||| | |||||||| |||||||||||| || ||| | ||| | | |||    
T  26687171 aacctaacaagacactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaat 26687270  T
Q  297 ctttccaggttcaatctcatc 317  Q
    |||||||||||||||||||||    
T  26687271 ctttccaggttcaatctcatc 26687291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 14665853 - 14665956
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||||| |      |||||||||||| |||||||| |||| ||| ||    
T  14665853 tcaactcataacaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccattgc 14665952  T
Q  260 gagt 263  Q
    ||||    
T  14665953 gagt 14665956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 14735366 - 14735469
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||||| |      |||||||||||| |||||||| |||| ||| ||    
T  14735366 tcaactcataacaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccattgc 14735465  T
Q  260 gagt 263  Q
    ||||    
T  14735466 gagt 14735469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 16103976 - 16104086
Alignment:
Q  109 cttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaa 207  Q
    |||||| ||||  ||||| |||| || ||||||||||  ||||  |||||||| |||||||| ||||||||||||||| || | |||||||||| |||||    
T  16103976 cttactggaacaacaacagcaagataaacaacttagtttctaacctctaagattaactcacatcaactcgtgcgacaaagagcgcatttaacctaaacaa 16104075  T
Q  208 ggcattctgta 218  Q
    |||| ||||||    
T  16104076 ggcagtctgta 16104086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 317
Target Start/End: Original strand, 13442561 - 13442678
Alignment:
Q  201 ctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatctt 299  Q
    ||||||||||| ||||| | ||| |  ||||||||||| |||||||| |||| | |||| ||| |||||||||||| || ||| | ||| | | ||||||    
T  13442561 ctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcaagttcaggtcagaatcccacaagtttcattctacaatctt 13442660  T
Q  300 tccaggttcaatctcatc 317  Q
    ||||||||||||||||||    
T  13442661 tccaggttcaatctcatc 13442678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 14669008 - 14669111
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| ||||||||||||||||| ||||  ||||||||| |||||||||||||||| |      |||||||||| | |||||||| |||| ||||||    
T  14669008 tcaactcataacaactcgtgcgacaaagatcgaatttaacctaaacaaggcattctgtaatactagtgctcgcgaggtgagagcctctgctcgccatggc 14669107  T
Q  260 gagt 263  Q
    ||||    
T  14669108 gagt 14669111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 4588661 - 4588603
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgta 218  Q
    |||||||| ||||||||||||||||| | || |||||||||| ||||||||||||||||    
T  4588661 tcaactcataacaactcgtgcgacaaagctcgcatttaacctaaacaaggcattctgta 4588603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 14572903 - 14572948
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcaga 273  Q
    ||||||||||| ||||||||||||| |||||||||| |||||||||    
T  14572903 ctcgcgaggcgagagcctctactcgccatggcgagttcaggtcaga 14572948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 53070528 - 53070460
Alignment:
Q  203 aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcag 272  Q
    |||||||| ||||||| ||||  | ||||||||||| ||||||||||||| |||||||||| ||||||||    
T  53070528 aacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggtcag 53070460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 11424635 - 11424524
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcg 260  Q
    ||||||| ||||||||||||| |||| | || ||   ||||||||||| || ||||| | | | | |||||||||||| ||||||||||||| | |||||    
T  11424635 tcaactctcaacaactcgtgcaacaaaggtcgcaaa-aacctaacaagacactctgtttctaggtcgctcgcgaggcgagagcctctactcgccgtggcg 11424537  T
Q  261 agtacaggtcaga 273  Q
    ||| |||||||||    
T  11424536 agttcaggtcaga 11424524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 17672869 - 17672927
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgt 217  Q
    |||||||||||||| ||||||||||| | | |||| ||||||||||||||  |||||||    
T  17672869 gatcaactcacaacgactcgtgcgacgaaggtcacttttaacctaacaagatattctgt 17672927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 12852235 - 12852134
Alignment:
Q  163 aactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcga 261  Q
    |||||| |||||||||| | ||||||||| |||||||||| |||| ||||||||||| |      |||||||||||  |||||||| |||| ||||||||    
T  12852235 aactcataacaactcgtactacaaggatcgcatttaacctaaacatggcattctgtaatacaagtgctcgcgaggcaagagcctctgctcgccatggcga 12852136  T
Q  262 gt 263  Q
    ||    
T  12852135 gt 12852134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 19725721 - 19725672
Alignment:
Q  227 gctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    |||||||||||| |||| ||| |||| ||||||||||||| |||||||||    
T  19725721 gctcgcgaggcgagagcatctgctcgccatggcgagtacaagtcagaatc 19725672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 14973141 - 14973225
Alignment:
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagt 284  Q
    |||||||||||| ||||| | ||| |  || |||||||| |||||||| |||| | |||||||| |||||||||||  |||||||    
T  14973141 cctaacaaggcactctgtttctgggtcacttgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagt 14973225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 20698243 - 20698195
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    ||||||||||| |||||||| |||| | |||||||| ||||||||||||    
T  20698243 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatc 20698195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 41 - 269
Target Start/End: Original strand, 32664 - 32892
Alignment:
Q  41 aacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagacaac 140  Q
    ||||||| ||||  ||||| ||||||  |||||||||| ||||| | |||| |||||||  |||||||||||||  |||   ||||||||| || |||||    
T  32664 aacataattcatgtaatgtatatacaactatataacattaacaaaaacattagattatataattcaggcttactgaaacaataacaacaagataaacaac 32763  T
Q  141 ttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcggg 240  Q
    |||||  || |  ||||||||||||||||| ||||||||||||||| |||| ||||||||| ||||||||||||||||  ||| |||||||||||||| |    
T  32764 ttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacccaacaaggcattctgtaactgggtagctcgcgaggcgag 32863  T
Q  241 agcctctactcgtcatggcgagtacaggt 269  Q
     ||||||||||| |||||||||| |||||    
T  32864 ggcctctactcgccatggcgagttcaggt 32892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 10614 - 10884
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatat-catc-aacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| |||||||| ||  |  |||| ||||||| ||||  ||||| |||||| |||||| |||| ||||||| |||| ||||||    
T  10614 tataacaatatcgaatgcaagtcatcaacatctcaaacatcgaacataattcatgtaatgtatatacaattatatgacattaacaacaacattagattat 10713  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    |  |||||||||||||  |||  ||||| |||| || ||||||||||  || |  ||||||||||||||||| ||||||||||||||  |||| ||||||    
T  10714 ataattcaggcttactgaaacaacaacagcaagataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacagagatcgcattta 10813  T
Q  199 acctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||||||||||||||| || |  | | || ||||||||||| |||||||||||||  ||||||||| |||||    
T  10814 acctaacaaggcattttggaactaggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggt 10884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 6899 - 7214
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttca-tatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattata 99  Q
    ||||||||||| |||||||| ||| |||||  | |||||  ||||||| ||||  ||||| |||||| ||||||||||| |  |||| ||||   | |||    
T  6899 tataacaatattgaatgcaaatcaacaactcaaatatca--aacataagtcatgtaatgtatatacaattatataacattataaacaacattaattcata 6996  T
Q  100 cgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaa 199  Q
     |  |||| |||||| ||||  ||||| |||| || ||||||||||  ||||  ||||||||||||||||| ||||| |||||||||| ||| |||||||    
T  6997 tgcatcagtcttactggaacaacaacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaacttgtgcgacaagaatcgcatttaa 7096  T
Q  200 cct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacagg-tcagaatcacaaaagtccatcccataatc 297  Q
    ||| ||||||||||||||||  | |||||||||| ||||| ||||||||||||| |||||||||| |||| ||||  |||||||| | ||| | | ||||    
T  7097 cctaaacaaggcattctgtaactagttagctcgcaaggcgagagcctctactcgccatggcgagttcaggttcag-ttcacaaaaattcattctaaaatc 7195  T
Q  298 tttccaggttcaatctcat 316  Q
    |||||||||||||||||||    
T  7196 tttccaggttcaatctcat 7214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 269
Target Start/End: Original strand, 8144 - 8372
Alignment:
Q  41 aacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagacaac 140  Q
    ||||||| ||||  ||||| |||||| ||||||||||| ||||||| |||| |||||||  |||||||||||||  |||  ||||| || | || |||||    
T  8144 aacataattcatgtaatgtatatacaattatataacattaacaacaacattagattatataattcaggcttactgaaacaacaacagcaggataaacaac 8243  T
Q  141 ttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcggg 240  Q
    ||||| ||| |  ||||||||||||||||| ||||||||| ||||| |||||||||  ||||||||| ||||| ||||  |||  | ||||||||||| |    
T  8244 ttagttccttacctctaagatcaactcacatcaactcgtgagacaaagatcacattatacctaacaaagcattatgtaactggacaactcgcgaggcgag 8343  T
Q  241 agcctctactcgtcatggcgagtacaggt 269  Q
     ||||| ||||| |||||||||| |||||    
T  8344 ggcctccactcgccatggcgagttcaggt 8372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 6698 - 6969
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatat-catcaa-cataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| | |||| | | |||  |||||| ||||| ||||  ||||| |||||| ||||||||||| ||||||| |||| ||| ||    
T  6698 tataacaatatcgaatgcaagttatcatcattataaacatcaaacataattcatgtaatgtatatacaattatataacattaacaacaacattagatcat 6797  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    |  ||||| |||||||| |||  ||||| |||| || |||||||||   ||||  || ||| |||||||||| ||||||||||||||| |||| ||||||    
T  6798 ataattcaagcttactaaaacaacaacagcaagataaacaacttagattctaatctccaagttcaactcacatcaactcgtgcgacaaagatcgcattta 6897  T
Q  199 acct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    |||| ||||| ||||||| ||  ||||||||| |||||||| | ||||||||||| |||||||||| |||||    
T  6898 acctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggt 6969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 14078 - 14349
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatat-catcaa-cataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| | |||| | | |||  |||||| ||||| ||||  ||||| |||||| ||||||||||| ||||||| |||| ||| ||    
T  14078 tataacaatatcgaatgcaagttatcatcattataaacatcaaacataattcatgtaatgtatatacaattatataacattaacaacaacattagatcat 14177  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    |  ||||| |||||||| |||  ||||| |||| || |||||||||   ||||  || ||| |||||||||| ||||||||||||||| |||| ||||||    
T  14178 ataattcaagcttactaaaacaacaacagcaagataaacaacttagattctaatctccaagttcaactcacatcaactcgtgcgacaaagatcgcattta 14277  T
Q  199 acct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    |||| ||||| ||||||| ||  ||||||||| |||||||| | ||||||||||| |||||||||| |||||    
T  14278 acctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggt 14349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 263
Target Start/End: Complemental strand, 15763 - 15601
Alignment:
Q  102 attcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacc 201  Q
    |||||||||||||  |||  ||||| |||| || ||||||||||  ||||  || |||||||||||||| ||||||||||||||| |||||||||||||     
T  15763 attcaggcttactgaaacaacaacagcaagataaacaacttagtttctaatctccaagatcaactcacatcaactcgtgcgacaaagatcacatttaaca 15664  T
Q  202 t-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    | ||||||||||||||||  |||||||||||||||||| | ||||||||||| ||||||||||    
T  15663 taaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagt 15601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 74; Significance: 6e-34; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 40208 - 39937
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttc--atatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| ||| |||| ||  | || |||||||||| ||||| ||||| |||||| ||||||| ||| ||||||| |||  ||| ||    
T  40208 tataacaatatcgaatgcaaatcaacaacatctcaaat-atcaacataattcatataatgtatatacaattatataccattaacaacaacataagatcat 40110  T
Q  99 acga-ttcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattt 197  Q
    |  | ||||||||||||  |||  ||||| |||| || ||||||||||  ||||  ||||||||||||||||| |||||||||| |||| |||| |||||    
T  40109 attaattcaggcttactgaaacaacaacatcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcaacaaagatcgcattt 40010  T
Q  198 aacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||||| || |||||||| ||||  | |||||||||||||||| ||||||||||| | |||||| ||| |||||    
T  40009 aacctaaataaggcattttgtaactagttagctcgcgaggcgagagcctctacttgccatggcaagttcaggt 39937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 41 - 218
Target Start/End: Original strand, 100502 - 100681
Alignment:
Q  41 aacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacga-ttcaggcttactagaacgtcaacaacaagctagacaa 139  Q
    ||||||| ||||| ||||| |||||| ||||||||||| ||||||| |||| ||| |||  | || |||||||||  |||  |||||||||| || ||||    
T  100502 aacataattcatataatgtatatacaattatataacattaacaacaacattagatcatattaatttaggcttactgaaacaacaacaacaagataaacaa 100601  T
Q  140 cttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaaccta-acaaggcattctgta 218  Q
    ||||||  ||||  ||||||| ||| ||||| ||||||||||||||| |||| |||||||| || |||||||||| ||||    
T  100602 cttagtttctaacctctaagagcaagtcacatcaactcgtgcgacaaagatcgcatttaacttagacaaggcattttgta 100681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 101617 - 101685
Alignment:
Q  136 acaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaa 204  Q
    ||||||||||  ||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  101617 acaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcacatttaacctaa 101685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 12853 - 13073
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatat-catcaa-cataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| |||||||| |||||  |||||| ||||| ||||  ||||| |||||| ||||||||||| || |||| |||| ||| ||    
T  12853 tataacaatatcgaatgcaagtcatcaacatcataaacatcaaacataattcatgtaatgtatatacaattatataacattaataacaacattagatcat 12952  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    |  ||||||||||||| ||||  ||||| |||| || || |||||||  ||||  ||||||||||||||||| ||||||||||||||| |||  ||||||    
T  12953 ataattcaggcttactggaacaacaacagcaagataaaccacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagattgcattta 13052  T
Q  199 acct-aacaaggcattctgta 218  Q
    |||| ||||||||||| ||||    
T  13053 acctaaacaaggcattttgta 13073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 19351 - 19669
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttc--atatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| ||| |||| ||  | || |||||||||| ||||| ||||| |||||| ||||||| ||| ||||||| |||| ||| ||    
T  19351 tataacaatatcgaatgcaaatcaacaacatctcaaat-atcaacataattcatataatgtatatacaattatataccattaacaacaacattagatcat 19449  T
Q  99 acgat-tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattt 197  Q
    |  |  ||||| |||||  |||  ||||| |||| || ||||||||||  ||||  ||||||||||||||||| ||||| |||||||||||||| |||||    
T  19450 attaaatcagggttactgaaacaacaacatcaagataaacaacttagtttctaacctctaagatcaactcacatcaacttgtgcgacaaggatcgcattt 19549  T
Q  198 aacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataat 296  Q
    ||| ||| |||| |||||||||  ||| |   |||||||||| |||||||| |||| |||||||||| |||||   |  || |||| | ||| | | |||    
T  19550 aacataagcaagacattctgtaactgggtcattcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaacacataaaaattcattctaaaat 19649  T
Q  297 ctttccaggttcaatctcat 316  Q
    ||||||||||||||||||||    
T  19650 ctttccaggttcaatctcat 19669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 136 - 269
Target Start/End: Complemental strand, 45689 - 45555
Alignment:
Q  136 acaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaa-caaggcattctgtatttggttagctcgcga 234  Q
    ||||||||||  ||||  ||||||||||||||||| ||||||||||||||| |||| |||||| ||||| |||| |||||||||  | ||||||||||||    
T  45689 acaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttatcctaaacaagacattctgtaactagttagctcgcga 45590  T
Q  235 ggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    |||| ||||||||||||| |||||||||| |||||    
T  45589 ggcgagagcctctactcgccatggcgagttcaggt 45555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 129992 - 130257
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttc----atatcatcaacataaatcatacaatgtttatacacttatataacatc---aacaacatcattgg 93  Q
    |||||||||||||||||||| |||||||| ||    ||||||  ||||||| ||||  ||||| |||||| |||||||||||    |||||||||| |      
T  129992 tataacaatatcgaatgcaagtcatcaacatctcaaatatca--aacataattcatgtaatgtatatacaattatataacattgtaaacaacatcaat-- 130087  T
Q  94 attatacgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcac 193  Q
     | ||| |  |||| |||||| ||||  ||||| |||| || ||||||||||  ||||  ||||||||||||||||| ||||||||||||||| |||| |    
T  130088 -tcatatgcatcagtcttactggaacaacaacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgc 130186  T
Q  194 atttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    ||||| ||| ||||||||||| ||||  | |||||||||||||||| |||||||| |||| ||||||||||    
T  130187 atttatcctaaacaaggcattttgtaactagttagctcgcgaggcgagagcctctgctcgccatggcgagt 130257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 1068 - 798
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatat-catcaa-cataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||| ||||||||||| |||||||| |||||  |||||| ||||| ||||  ||||| |||||| ||||||||||| | ||||| |||| |||| |    
T  1068 tataacaacatcgaatgcaagtcatcaacatcataaacatcaaacataattcatgtaatgtatatacaattatataacattagcaacaacattagatt-t 970  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    || |||||||||||||  |||  |||||||||| || | ||||||||  ||||  || |||||||||| ||| ||||| | ||||||| |||| ||||||    
T  969 acaattcaggcttactgaaacaacaacaacaagataaataacttagtttctaacttccaagatcaactaacatcaacttgcgcgacaaagatcgcattta 870  T
Q  199 acct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    |||| ||||||||||| ||||  ||| ||  |||||||||| | |||||||||||  | ||||||| |||||    
T  869 acctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgctaaggcgagttcaggt 798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 10575 - 10305
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttc----atatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggatt 96  Q
    |||||||||||||||||||| |||||||| ||    ||||||  ||||||| ||||  ||||| |||||| ||||||||||| |  |||| |||    |     
T  10575 tataacaatatcgaatgcaagtcatcaacatctcaaatatca--aacataattcatgtaatgtatatacaattatataacattataaacaacatcaattc 10478  T
Q  97 atacgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatt 196  Q
    ||| |  |||| |||||| ||||  |||||||||| || ||||||||||  ||||  ||||||||||||||||| |||||||||| |||| |||| ||||    
T  10477 atatgcatcagtcttactggaacaacaacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcaacaaagatcgcatt 10378  T
Q  197 taacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||||||||||||||| | ||||   ||  | ||||||||||| |||||||||||||   |||||||| |||||    
T  10377 taacctaacaaggcagtatgtaacaggacaactcgcgaggcgagagcctctactcgctttggcgagttcaggt 10305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 6157 - 5873
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatat-catcaa-cataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| |||| ||| |||||  |||||| ||||| ||||  ||||| |||||| ||||||||||| | ||||| |||| ||||||    
T  6157 tataacaatatcgaatgcaagtcattaacatcataaacatcaaacataattcatgtaatgtatatacaattatataacattagcaacaacattagattat 6058  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    || |||||||||||||  |||   |||| |||| || | ||||||||   |||  || |||||||||| ||| ||||| | ||||||| |||| ||||||    
T  6057 acaattcaggcttactgaaacaataacagcaagataaataacttagtttttaacctccaagatcaactaacatcaacttgcgcgacaaagatcgcattta 5958  T
Q  199 acct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaa 282  Q
    |||| ||||||||||| ||||  ||| ||  |||||||||| | |||||||||||  | ||||||| |||||   ||||||||||    
T  5957 acctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgctaaggcgagttcaggtgcaaatcacaaaa 5873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 261
Target Start/End: Original strand, 160893 - 161033
Alignment:
Q  122 caacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaa-caaggcattctgtatt 220  Q
    |||||||||| || ||||||||||  ||||  ||||||||||||||||| ||||||||||||||| ||||||||||| ||||| |||| |||||||||      
T  160893 caacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcacatttatcctaaccaagacattctgtaac 160992  T
Q  221 tggttagctcgcgaggcgggagcctctactcgtcatggcga 261  Q
    | |||| |||| |||| | ||||||||||||| ||||||||    
T  160993 tagttacctcgtgaggtgagagcctctactcgccatggcga 161033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 85498 - 85440
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgt 217  Q
    ||||||||||||||||||||| |||| | | |||| ||||||||||||||| |||||||    
T  85498 gatcaactcacaacaactcgtacgacgaaggtcacttttaacctaacaaggtattctgt 85440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 38 - 218
Target Start/End: Complemental strand, 2214 - 2032
Alignment:
Q  38 atcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacgat-tcaggcttactagaacgtcaacaacaagctaga 136  Q
    |||| ||||| ||||| ||||| |||||| ||||||| ||| ||||||| |||||||| |||  |  |||||||||||  |||  ||||| |||| || |    
T  2214 atcagcataattcatataatgtatatacaattatataccattaacaacaacattggatcatattaaatcaggcttactgaaacaacaacagcaagataaa 2115  T
Q  137 caacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgta 218  Q
    ||||||| |  ||||  ||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||    
T  2114 caacttattttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgta 2032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 8106 - 7841
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatatcatca-acataaatcatacaatgtttatacacttatataacatcaacaacatcattggattata 99  Q
    |||||||||||| ||| ||| ||| |||| ||| | ||||| | |||| ||||  ||||| ||||||  |||||||||| | ||||| ||||  || |||    
T  8106 tataacaatatcaaatacaaatcaacaacatcacaacatcatatataattcatgtaatgtatatacaactatataacattatcaacaacattaaatcata 8007  T
Q  100 cgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaa 199  Q
      |||||||||||||  |||   |||| |||| || ||||||||||  || |  ||||||||||||||||| ||||||||||||||| |||| ||||||     
T  8006 taattcaggcttactgaaac---aacagcaagataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttac 7910  T
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacagg 268  Q
    |||||||||||||| ||||  |||  | ||||||||||| |||||| ||||||  ||||||||| ||||    
T  7909 cctaacaaggcattttgtaactgggcaactcgcgaggcgagagcctttactcgctatggcgagttcagg 7841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 218
Target Start/End: Complemental strand, 29209 - 29095
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaaccta 203  Q
    |||| |||||| |||| | |||| |||| || ||||||||||  ||||  ||||||||||||||||| |||||||  |||||| |||| |||| ||||||    
T  29209 tcagtcttactggaacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattcaaccta 29110  T
Q  204 acaaggcattctgta 218  Q
    | |||||||||||||    
T  29109 aaaaggcattctgta 29095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 5e-25; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 28406064 - 28406284
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttc--atatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| ||| |||| ||  | || |||||| ||| ||||| ||||| |||||| ||||||| ||| ||||||| || | ||| ||    
T  28406064 tataacaatatcgaatgcaaatcaacaacatctcaaat-atcaacttaattcataaaatgtatatacaattatataccattaacaacaacaatagatcat 28406162  T
Q  99 acgat-tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattt 197  Q
    |  |  | |||||||||| |||  ||||| |||| || ||||||||||  ||||  ||||||||||||||||| |||||||||||||||||||| |||||    
T  28406163 attaaattaggcttactaaaacaacaacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcgcattt 28406262  T
Q  198 aacct-aacaaggcattctgta 218  Q
    ||||| ||||||||||| ||||    
T  28406263 aacctaaacaaggcattatgta 28406284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 157 - 268
Target Start/End: Original strand, 23207523 - 23207634
Alignment:
Q  157 aagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcat 256  Q
    |||||||||||||| ||||||||||||||| | ||||||||||||||||||||  |||||||  |||  | ||||| ||||| |||||||||||||  ||    
T  23207523 aagatcaactcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgtaactgggcaactcgcaaggcgagagcctctactcgctat 23207622  T
Q  257 ggcgagtacagg 268  Q
    ||||||| ||||    
T  23207623 ggcgagttcagg 23207634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 263
Target Start/End: Complemental strand, 7710 - 7502
Alignment:
Q  55 aatgtttatacacttatataacatcaacaacatcattggattatacgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaat 154  Q
    ||||| |||||| |||||| |||| ||||||| ||||  || |||  |||||||||||||  |||  |||||||| | || ||||||||||  |  |  |    
T  7710 aatgtatatacaattatatcacattaacaacaacattaaatcatataattcaggcttactgaaacaacaacaacatgataaacaacttagtttcctacct 7611  T
Q  155 ctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtc 254  Q
    | |||||||||||||| ||||||||||||||| | ||||||| |||||||| | | ||||||| | |  | |||||| |||||| |||||||||||||      
T  7610 ccaagatcaactcacatcaactcgtgcgacaaaggtcacattaaacctaaccaagtattctgtctctcatgagctcgtgaggcgagagcctctactcgct 7511  T
Q  255 atggcgagt 263  Q
    |||||||||    
T  7510 atggcgagt 7502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 317
Target Start/End: Original strand, 23076691 - 23076844
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcg 260  Q
    ||||||| ||||||||||||| |||| | || ||   |||||||||||||| ||||| | ||| || ||||||||||| ||||||||||||| | |||||    
T  23076691 tcaactctcaacaactcgtgcaacaaaggtcgcaa--aacctaacaaggcactctgtttctgggtaactcgcgaggcgagagcctctactcgccgtggcg 23076788  T
Q  261 agtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcatc 317  Q
    ||| |||||||||||  ||||  | ||| | | ||||||||||||| ||||||||||    
T  23076789 agttcaggtcagaattccaaagtttcattcta-aatctttccaggtccaatctcatc 23076844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 263
Target Start/End: Original strand, 23791465 - 23791626
Alignment:
Q  102 attcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacc 201  Q
    |||||||||||||  |||  |||||||||| || ||||||||||  | ||   | |||||||||||||| ||||||||||||||| | ||||||||||||    
T  23791465 attcaggcttactgaaacaacaacaacaagataaacaacttagtttccaacccccaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacc 23791564  T
Q  202 taacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    ||||||||  |||||| |       |||||||||||| |||||||||||||  |||||||||    
T  23791565 taacaaggtgttctgtctcacaagggctcgcgaggcgagagcctctactcgcgatggcgagt 23791626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 25175937 - 25176199
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttc--atatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| ||| |||| ||  | || |||||||||| ||||| || || |||| | ||||||||||| ||||||| |||| ||| ||    
T  25175937 tataacaatatcgaatgcaaatcaacaacatctcaaat-atcaacataattcatataacgtatatataattatataacattaacaacaacattagatcat 25176035  T
Q  99 acga-ttcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattt 197  Q
    |  | ||||||||||||  |||  ||||| |||| || ||||||||||  ||||  ||||||||||||| ||| ||| ||||||||||| ||||     |    
T  25176036 attaattcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacctctaagatcaacttacatcaattcgtgcgacaaagatc-----t 25176130  T
Q  198 aacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtc 270  Q
    |    ||||||||||||||||  ||   || |||||||||| | ||||||||||| |||||||||| ||||||    
T  25176131 a----aacaaggcattctgtaactgcgcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtc 25176199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 22134114 - 22134031
Alignment:
Q  136 acaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgta 218  Q
    ||||||||||  ||||  ||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||| ||||||    
T  22134114 acaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctgta 22134031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 22459440 - 22459377
Alignment:
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgt 217  Q
    |||||| |||||||||| ||||||||  ||||| | ||||||||||||||||||||||||||||    
T  22459440 tctaaggtcaactcacatcaactcgtaggacaaaggtcacatttaacctaacaaggcattctgt 22459377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 298621 - 298532
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatctttccaggttcaatctcatc 317  Q
    ||||||||||| ||||||||||||| | |||||||| |||||||||||| || ||| | ||| | | ||||||||||||||||||||||||    
T  298621 ctcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattcta-aatctttccaggttcaatctcatc 298532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 317
Target Start/End: Original strand, 27753862 - 27753979
Alignment:
Q  201 ctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatctt 299  Q
    ||||||||||| ||||| | ||| |  || |||||||| |||||||| |||| | |||||||| |||||||||||| || ||| | ||| | | ||||||    
T  27753862 ctaacaaggcactctgtttctgggtcacttgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctt 27753961  T
Q  300 tccaggttcaatctcatc 317  Q
    ||||||||||||||||||    
T  27753962 tccaggttcaatctcatc 27753979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 18786935 - 18786683
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatatcatcaa-cataaatcatacaatgtttatacacttatataacatcaacaacatcattggattata 99  Q
    ||||||||| || ||||||||||| |||| ||| | |||||| ||||| ||||  ||||| ||||||  |||||||||| | ||| | ||||  || |||    
T  18786935 tataacaatctcaaatgcaattcaacaacgtcacaacatcaaacataattcatgtaatgtatatacaactatataacattatcaataacattcaatcata 18786836  T
Q  100 cgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaa 199  Q
      ||| |||||||||  |||  ||||| || | || ||||||||||  |  |  || |||||||||||||| |||||||||||||||   |||||||  |    
T  18786835 taatttaggcttactgaaacaacaacagcatgataaacaacttagtttcctacctccaagatcaactcacatcaactcgtgcgacaaaagtcacattaga 18786736  T
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcg 252  Q
    |||||||| |  |||||| | |  | ||||||||||||| |||||||||||||    
T  18786735 cctaacaaagtgttctgtctctcttgagctcgcgaggcgagagcctctactcg 18786683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 316
Target Start/End: Original strand, 23660307 - 23660425
Alignment:
Q  198 aacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataat 296  Q
    |||||||||||||| ||||| | ||| |  ||| ||||||| |||||||| |||| | |||||||| ||||||||| || |||||| | ||| | | |||    
T  23660307 aacctaacaaggcactctgtttctgggtcactcacgaggcgagagcctctgctcgccgtggcgagttcaggtcagattc-caaaagtttcattctaaaat 23660405  T
Q  297 ctttccaggttcaatctcat 316  Q
    ||||||||||||||||||||    
T  23660406 ctttccaggttcaatctcat 23660425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 25109136 - 25109186
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaagg 209  Q
    |||||||| ||| ||||||||||||||| | ||||||||||||||||||||    
T  25109136 gatcaacttacatcaactcgtgcgacaaaggtcacatttaacctaacaagg 25109186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 32451736 - 32451646
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatctttccaggttcaatctcatc 317  Q
    ||||||||||| |||||||| |||| | |||||||| |||||||||||| || ||| | ||| | | |||||||||| |||||||||||||    
T  32451736 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccatgttcaatctcatc 32451646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 317
Target Start/End: Original strand, 22337364 - 22337519
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcg 260  Q
    ||||||| ||||||||||||| |||| | |||||   ||||||||||| |  ||||| | ||| |  ||||||||||| ||||||||||||| | |||||    
T  22337364 tcaactctcaacaactcgtgcaacaaaggtcacaaa-aacctaacaagactctctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcg 22337462  T
Q  261 agtacaggtcagaa-tcacaaaagtccatcccataatctttccaggttcaatctcatc 317  Q
    | | |||||||||| ||| |||  | ||| | | ||||||||||||||||||||||||    
T  22337463 aattcaggtcagaactcaaaaagtttcattcta-aatctttccaggttcaatctcatc 22337519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 317
Target Start/End: Complemental strand, 22731070 - 22730950
Alignment:
Q  198 aacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtc-catcccataat 296  Q
    |||||||||||||| ||||| | ||| |  |||| |||||| |||||| | |||  | |||||||| |||||||||||| || ||||  ||| | | |||    
T  22731070 aacctaacaaggcactctgtttctgggtgactcgtgaggcgagagcctttgctccccgtggcgagttcaggtcagaatcccacaagtttcattctacaat 22730971  T
Q  297 ctttccaggttcaatctcatc 317  Q
    |||||||||||||||||||||    
T  22730970 ctttccaggttcaatctcatc 22730950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 317
Target Start/End: Complemental strand, 22738017 - 22737897
Alignment:
Q  198 aacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataat 296  Q
    |||||||||||||| ||||| | | | |  ||||||||||| |||||||| |||| | |||||||| ||| |||||||| || ||| | ||| | | |||    
T  22738017 aacctaacaaggcactctgtttctaggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagttcagaatcccacaagtttcattctacaat 22737918  T
Q  297 ctttccaggttcaatctcatc 317  Q
    ||||| |||||||||||||||    
T  22737917 ctttctaggttcaatctcatc 22737897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 31756229 - 31756267
Alignment:
Q  225 tagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  31756229 tagctcgcgaggcgagagcctctactcgccatggcgagt 31756267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 263
Target Start/End: Complemental strand, 23071842 - 23071733
Alignment:
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgt 253  Q
    ||||||||||||||||| |||||||  ||| || |||| |||| ||||||| |||||||| ||||        |||||||||||| |||||||| ||||     
T  23071842 tctaagatcaactcacatcaactcgaacgaaaaagatctcattcaacctaaaaaggcattttgtaacacaaacgctcgcgaggcgagagcctctgctcgc 23071743  T
Q  254 catggcgagt 263  Q
    ||||||||||    
T  23071742 catggcgagt 23071733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 136401 - 136132
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatatcatca-acataaatcatacaatgtttatacacttatataacatcaacaacatcattggatt-at 98  Q
    |||||||||||| ||||||| ||| |||| ||| ||||||  |||||| ||||  ||||| ||||||  |||||||||| ||||||| ||||  | | ||    
T  136401 tataacaatatcaaatgcaaatcaacaacatcacatcatcgtacataattcatgtaatgtatatacaactatataacattaacaacaacattaaaatcat 136302  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    |  |||||||||||||  |||  ||||| |||| || ||||||||||  |  |  || |||||||||||||| |||||||| |||||| | |||||||||    
T  136301 ataattcaggcttactgaaacaacaacagcaagataaacaacttagtttcctacctccaagatcaactcacatcaactcgtacgacaaaggtcacattta 136202  T
Q  199 acctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacagg 268  Q
    |||||||||||  |||| ||  |||  | ||||||||||| |||||||||||||  ||||||||| ||||    
T  136201 acctaacaaggtgttctataaatggacaactcgcgaggcgagagcctctactcgctatggcgagttcagg 136132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 145109 - 144840
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttcatatcatca-acataaatcatacaatgtttatacacttatataacatcaacaacatcattggatt-at 98  Q
    |||||||||||| ||||||| ||| |||| ||| ||||||  |||||| ||||  ||||| ||||||  |||||||||| ||||||| ||||  | | ||    
T  145109 tataacaatatcaaatgcaaatcaacaacatcacatcatcgtacataattcatgtaatgtatatacaactatataacattaacaacaacattaaaatcat 145010  T
Q  99 acgattcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    |  |||||||||||||  |||  ||||| |||| || ||||||||||  |  |  || |||||||||||||| |||||||| |||||| | |||||||||    
T  145009 ataattcaggcttactgaaacaacaacagcaagataaacaacttagtttcctacctccaagatcaactcacatcaactcgtacgacaaaggtcacattta 144910  T
Q  199 acctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacagg 268  Q
    |||||||||||  |||| ||  |||  | ||||||||||| |||||||||||||  ||||||||| ||||    
T  144909 acctaacaaggtgttctataaatggacaactcgcgaggcgagagcctctactcgctatggcgagttcagg 144840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 124899 - 124980
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatctttccaggttc 308  Q
    ||||||||||| |||||||| |||| | |||||||| |||||||||||| || ||| | ||| | | |||||||||||||||    
T  124899 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttc 124980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 154 - 316
Target Start/End: Original strand, 370 - 533
Alignment:
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcg 252  Q
    ||||||||||||||||| |||||||| |||||| |||| |||||||| ||| |||| |||||||||  ||| |  ||||||||||| |||||||| ||||    
T  370 tctaagatcaactcacatcaactcgtacgacaaagatcgcatttaacataagcaagacattctgtaactgggtcactcgcgaggcgagagcctctgctcg 469  T
Q  253 tcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcat 316  Q
     |||||||||| |||||   | |||||||| | ||| | | |||||||||| ||||||||||||    
T  470 ccatggcgagttcaggtgcaactcacaaaaattcattctaaaatctttccaagttcaatctcat 533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 269
Target Start/End: Complemental strand, 2733 - 2567
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct- 202  Q
    |||||||||||  |||  ||||| |||| || ||||||||||  ||||  ||||||||||||||||| ||||||||||||||||||||||||||  |||     
T  2733 tcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcacatttttccta 2634  T
Q  203 aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||||||||||||||||         ||||||||||| ||||||||||||| |||||||||| |||||    
T  2633 aacaaggcattctgtaacacaagtactcgcgaggcgagagcctctactcgccatggcgagttcaggt 2567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 5730 - 5949
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttc--atatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| ||| |||| ||  | || |||||||||| ||||| ||||| |||||| ||||||| ||| ||||||| |||| ||| ||    
T  5730 tataacaatatcgaatgcaaatcaacaacatctcaaat-atcaacataattcatataatgtatatacaattatataccattaacaacaacattagatcat 5828  T
Q  99 acga-ttcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattt 197  Q
    |  | ||||||||||||  |||  |||||||||| || | ||||||||   |||  ||||||||||||||||| ||||| |||||||||| |||||||||    
T  5829 attaattcaggcttactgaaacaacaacaacaagataaa-aacttagtttttaacctctaagatcaactcacatcaacttgtgcgacaagaatcacattt 5927  T
Q  198 aacct-aacaaggcattctgta 218  Q
    | ||| || |||||||||||||    
T  5928 agcctaaataaggcattctgta 5949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 6622 - 6892
Alignment:
Q  1 tataacaatatcgaatgcaattcatcaacttc--atatcatcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat 98  Q
    |||||||||||||||||||| ||| |||| ||  | || |||||||||| ||||| ||||| |||||| ||||||| ||| ||||||| |||| ||| ||    
T  6622 tataacaatatcgaatgcaaatcaacaacatctcaaat-atcaacataattcatataatgtatatacaattatataccattaacaacaacattagatcat 6720  T
Q  99 acga-ttcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattt 197  Q
    |  | ||||||||||||  |||  ||||| |||| || ||||||||||   |||  ||||||||||||||||| ||||| ||||||||| |||| |||||    
T  6721 attaattcaggcttactgaaacaacaacagcaagata-acaacttagtttttaacctctaagatcaactcacatcaacttgtgcgacaaagatcgcattt 6819  T
Q  198 aacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    | ||| ||||||||||| ||||  | || |  |||||||| | | ||||| ||||| |||||||||| |||||    
T  6820 atcctaaacaaggcattttgtaactagtcaattcgcgaggggagggcctccactcgccatggcgagttcaggt 6892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 8711 - 8774
Alignment:
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgt 217  Q
    ||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||    
T  8711 tctaagatcaattcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggcattctgt 8774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 38 - 269
Target Start/End: Complemental strand, 2641 - 2408
Alignment:
Q  38 atcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacga-ttcaggcttactagaacgtcaacaacaagctaga 136  Q
    |||||||||| ||||| ||||| |||||| ||||||| ||| ||||||| |||| ||| |||  | ||||||||||||  |||  || || |||| || |    
T  2641 atcaacataattcatataatgtatatacaattatataccattaacaacaacattagatcatattaattcaggcttactgaaacaacatcagcaagataaa 2542  T
Q  137 caacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgag 235  Q
    ||||||| |  ||||  ||||||||||||||||| ||||| ||||||||| |||| |||||| ||| ||||||||||||||||  | || |  |||||||    
T  2541 caacttaatttctaacctctaagatcaactcacatcaacttgtgcgacaaagatcgcatttatcctaaacaaggcattctgtaactagtcaattcgcgag 2442  T
Q  236 gcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||    ||||||||||| |||||||||| |||||    
T  2441 gcaatggcctctactcgccatggcgagttcaggt 2408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 157 - 268
Target Start/End: Complemental strand, 1673 - 1562
Alignment:
Q  157 aagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcat 256  Q
    |||||||||||||| ||||||||||||||| | |||||| |||||||||||||  ||||||| ||||  | ||| ||||||| |||||||||||||  ||    
T  1673 aagatcaactcacatcaactcgtgcgacaaaggtcacatgtaacctaacaaggtgttctgtaattgggcatctcacgaggcgagagcctctactcgctat 1574  T
Q  257 ggcgagtacagg 268  Q
    ||||||| ||||    
T  1573 ggcgagttcagg 1562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 62320 - 62479
Alignment:
Q  38 atcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattat-acgattcaggcttactagaacgtcaacaacaagctaga 136  Q
    |||||||||| ||||| ||||| |||||| ||||||||||| |||||||||||| | | || || |||||||||||||  |||  ||||| |||| || |    
T  62320 atcaacataattcatataatgtatatacaattatataacattaacaacatcattagttcataacaattcaggcttactgaaacaacaacagcaagataaa 62419  T
Q  137 caacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatt 196  Q
    |||||||||  ||||  ||||||||||||||||| | | ||| |||||||||||| ||||    
T  62420 caacttagtttctaacctctaagatcaactcacatcgaatcgggcgacaaggatcgcatt 62479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 316
Target Start/End: Original strand, 132875 - 133056
Alignment:
Q  136 acaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcga 234  Q
    ||||||||||  ||||  ||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||         |||||||    
T  132875 acaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcacatttaacctaaacaaggcattatgtaagacaagtactcgcga 132974  T
Q  235 ggcgggagcctctactcgtcatggcgagtacagg-tcagaatcacaaaagtccatcccataatctttccaggttcaatctcat 316  Q
    |||| |||||||| |||| |||||||||| |||| ||||  |||||||| | ||| | | | |||||||||||||||||||||    
T  132975 ggcgagagcctctgctcgccatggcgagttcaggttcag-ttcacaaaatttcattctaaagtctttccaggttcaatctcat 133056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 1274 - 1388
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaaccta 203  Q
    |||| |||||| ||||  |||||||||| || | ||||||||  || |  ||||||||||||||||| ||||||||| ||||| |||| |||||||||||    
T  1274 tcagtcttactggaacaacaacaacaagataaaaaacttagtttcttacctctaagatcaactcacatcaactcgtgtgacaaagatcgcatttaaccta 1373  T
Q  204 acaaggcattctgta 218  Q
    |||||||||||||||    
T  1374 acaaggcattctgta 1388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 268
Target Start/End: Original strand, 12810 - 12924
Alignment:
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgt 253  Q
    ||||||||||||||||| | ||||||||||||| | ||||||||||||||||||||  |||||| | |  | ||||||||||||| ||||||||||||      
T  12810 tctaagatcaactcacatccactcgtgcgacaaaggtcacatttaacctaacaaggtgttctgtctctcatgagctcgcgaggcgagagcctctactccc 12909  T
Q  254 catggcgagtacagg 268  Q
     ||||||||| ||||    
T  12910 tatggcgagttcagg 12924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 316
Target Start/End: Complemental strand, 15421 - 15333
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctttccaggttcaatctcat 316  Q
    ||||||||||| |||||||| ||||  ||||||||| ||||||||| || ||||  | ||| | | ||||| ||||| |||||||||||    
T  15421 ctcgcgaggcgagagcctctgctcgctatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccagattcaatctcat 15333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 269
Target Start/End: Complemental strand, 7937 - 7822
Alignment:
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgt 253  Q
    ||||||||||||||||| ||| || |||||||| |||| ||||||||||| |||||||||||| |    | || ||||||||||| |||||||||||||     
T  7937 tctaagatcaactcacatcaattcttgcgacaaagatcgcatttaacctagcaaggcattctggaacaaggtaactcgcgaggcgagagcctctactcgc 7838  T
Q  254 catggcgagtacaggt 269  Q
     ||||||||| |||||    
T  7837 tatggcgagttcaggt 7822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 28708 - 28625
Alignment:
Q  136 acaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgta 218  Q
    ||||||||||  ||||  ||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||    
T  28708 acaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgta 28625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 268
Target Start/End: Complemental strand, 103514 - 103403
Alignment:
Q  157 aagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcat 256  Q
    |||||||||||||| |||||||| |||||| | ||||||||||||||||||||  |||||||  |||  | |||| |||||| |||||||||||||  ||    
T  103514 aagatcaactcacatcaactcgtacgacaaaggtcacatttaacctaacaaggtgttctgtaaatggacaactcgtgaggcgagagcctctactcgctat 103415  T
Q  257 ggcgagtacagg 268  Q
    ||||||| ||||    
T  103414 ggcgagttcagg 103403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 317
Target Start/End: Original strand, 20690 - 20807
Alignment:
Q  201 ctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatctt 299  Q
    ||||||||||| ||||| | | | | |||||||||||| |||||||| |||| | |||||||| |||||||||||| || ||| | ||| | ||||||||    
T  20690 ctaacaaggcactctgtttctaggtcgctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctataatctt 20789  T
Q  300 tccaggttcaatctcatc 317  Q
    ||||||||||||||||||    
T  20790 tccaggttcaatctcatc 20807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 266
Target Start/End: Original strand, 796 - 903
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatgg 258  Q
    |||||||||||| ||||||||||||||| | || |||||||||||||||||  |||||| |     |||||||||||| | | ||||||||||| |||||    
T  796 gatcaactcacatcaactcgtgcgacaaaggtctcatttaacctaacaaggtgttctgtctaacactagctcgcgaggtgagggcctctactcgccatgg 895  T
Q  259 cgagtaca 266  Q
    ||||||||    
T  896 cgagtaca 903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 2200 - 2117
Alignment:
Q  136 acaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgta 218  Q
    ||||||||||  ||||  |||||||| |||||||| | |||||||||||||||||| |||||||||| ||||||||||||||||    
T  2200 acaacttagtttctaacctctaagattaactcacatccactcgtgcgacaaggatcgcatttaacctaaacaaggcattctgta 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 9707 - 9604
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||| |      |||||||||||| |||||||| |||| |||| |    
T  9707 tcaactcataacaactcgtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatgac 9608  T
Q  260 gagt 263  Q
    ||||    
T  9607 gagt 9604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 198 - 317
Target Start/End: Complemental strand, 339787 - 339668
Alignment:
Q  198 aacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatc 297  Q
    |||||||||||||| ||| | | ||| |  ||||||||||| |||||||| |||| | |||||||| || |||||| || ||||||| ||| | | ||||    
T  339787 aacctaacaaggcactctatttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcatgtcagattcccaaaagttcattctacaatc 339688  T
Q  298 tttccaggttcaatctcatc 317  Q
    ||||||||||||||||||||    
T  339687 tttccaggttcaatctcatc 339668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 317
Target Start/End: Original strand, 2100 - 2255
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcg 260  Q
    ||||||| | ||||||||||| |||| | |||||   || ||||||||||| ||||| || || |  |||| ||||||  |||||||||||| |||||||    
T  2100 tcaactctcgacaactcgtgcaacaaaggtcacaa--aatctaacaaggcactctgttttagggtcactcgtgaggcgatagcctctactcgccatggcg 2197  T
Q  261 agtacaggtcagaatcacaaaag-tccatcccataatctttccaggttcaatctcatc 317  Q
    ||| |||||||||||| || ||| | ||| | | ||||||||||||||||||||||||    
T  2198 agttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatc 2255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 207392 - 207289
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| ||||||||||||||||| |||| |||||||||| ||||| ||||| |||| |      |||||||||||| |||||||| |||| ||||||    
T  207392 tcaactcataacaactcgtgcgacaaagatcgcatttaacctaaacaaagcattgtgtaatactagtgctcgcgaggcgagagcctctgctcgccatggc 207293  T
Q  260 gagt 263  Q
    ||||    
T  207292 gagt 207289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 218
Target Start/End: Complemental strand, 14693 - 14511
Alignment:
Q  38 atcaacataaatcatacaatgtttatacacttatataacatcaacaacatcattggattatacgat-tcaggcttactagaacgtcaacaacaagctaga 136  Q
    |||||||||| ||||| ||||| |||||  ||||||| ||| ||||| | |||| ||| |||  |  |||||||||||  |||  ||||| |||| || |    
T  14693 atcaacataattcatataatgtatatactattatataccattaacaaaaacattagatcatattaaatcaggcttactgaaacaacaacagcaagatata 14594  T
Q  137 caacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgta 218  Q
    |||||||||  ||||  ||||||||||||||||| ||||| ||||||| | |||| |||||| ||| ||||||||||||||||    
T  14593 caacttagtttctaacctctaagatcaactcacatcaacttgtgcgaccaagatcgcatttatcctaaacaaggcattctgta 14511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 263
Target Start/End: Original strand, 15869 - 16009
Alignment:
Q  123 aacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttg 222  Q
    |||| |||| || ||||||||||  ||||  ||||||||||||||||| |||||||  |||||| |||| ||||  |||||| |||||||||||||        
T  15869 aacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattccacctaaaaaggcattctgtaacac 15968  T
Q  223 gttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
       ||||||||||||| |||||||| |||| ||||||||||    
T  15969 aaaagctcgcgaggcgagagcctctgctcgccatggcgagt 16009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 4810 - 4926
Alignment:
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctt 299  Q
    ||||||| |||||||||| | ||| ||||| |||||||| |||||| | |||| ||||||||| ||||||| ||   |||||||| ||| | | ||||||    
T  4810 cctaacatggcattctgtttctgggtagcttgcgaggcgagagcctttgctcgccatggcgaggacaggtctgatcgacaaaagttcattctaaaatctt 4909  T
Q  300 tccaggttcaatctcat 316  Q
    | |||||||||||||||    
T  4910 ttcaggttcaatctcat 4926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 276 - 379
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| || |||||||||||||| |||| |||||||||| |||||||||||||||| |      |||||||||||| |||||||| |||| ||||||    
T  276 tcaactcataaaaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggc 375  T
Q  260 gagt 263  Q
    ||||    
T  376 gagt 379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 269
Target Start/End: Complemental strand, 43592 - 43549
Alignment:
Q  226 agctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  43592 agctcgcgaggcgagagcctctactcgtcatggcgagtacaggt 43549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 269
Target Start/End: Complemental strand, 47512 - 47469
Alignment:
Q  226 agctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    ||||||||||||| |||||||||||||||||||| |||||||||    
T  47512 agctcgcgaggcgagagcctctactcgtcatggctagtacaggt 47469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 268
Target Start/End: Complemental strand, 19760 - 19649
Alignment:
Q  157 aagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcat 256  Q
    |||||||||||| | |||| |||||||||| | ||||||||||||||||||||  |||||||  |||  | ||| ||||||| ||||||||||||   ||    
T  19760 aagatcaactcatatcaacccgtgcgacaaaggtcacatttaacctaacaaggtgttctgtaactgggcaactcacgaggcgagagcctctactccctat 19661  T
Q  257 ggcgagtacagg 268  Q
    ||||||| ||||    
T  19660 ggcgagttcagg 19649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 317
Target Start/End: Original strand, 40198 - 40315
Alignment:
Q  199 acctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatct 298  Q
    ||||||||||| | ||||| | ||| |  ||||||||||| ||||||||||||| | |||||||| ||||||||| |  ||||||| ||| | | |||||    
T  40198 acctaacaaggtactctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatct 40297  T
Q  299 ttccaggttcaatctcatc 317  Q
     | ||||||||||||||||    
T  40298 gt-caggttcaatctcatc 40315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 80205 - 80102
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| ||||||||||||||| | |||| |||||||||| |||||||||||||||| |    | |||||||||||| |||||||| |||| |||| |    
T  80205 tcaactcataacaactcgtgcgacgaagatcgcatttaacctaaacaaggcattctgtaatactattgctcgcgaggcgagagcctctgctcgccatgtc 80106  T
Q  260 gagt 263  Q
    ||||    
T  80105 gagt 80102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 22571 - 22509
Alignment:
Q  136 acaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaaggatcacattta 198  Q
    ||||||||||  ||||  ||||||||||||||||| ||||||||||||||| |||| ||||||    
T  22571 acaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcattta 22509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 253 - 311
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgt 217  Q
    |||||||||||| ||||| ||||||||| | |||||||||||||||||||| |||||||    
T  253 gatcaactcacatcaacttgtgcgacaaaggtcacatttaacctaacaaggtattctgt 311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 25353 - 25403
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaagg 209  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  25353 gatcaactcacaacaactcgtgcgacaaaggtcacatttatcctaacaagg 25403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 317
Target Start/End: Original strand, 52226 - 52316
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatctttccaggttcaatctcatc 317  Q
    ||||||||||| |||||||| |||| | |||||||| |||||||||||| || ||| | ||| | | ||||||||||||||||||||||||    
T  52226 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatc 52316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 167786 - 167738
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    ||||||||||| |||||||| |||| | |||||||| ||||||||||||    
T  167786 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatc 167738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 317
Target Start/End: Complemental strand, 25899 - 25782
Alignment:
Q  200 cctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtccatcccataatctt 299  Q
    |||||||||||| ||||| | ||| |  ||||||||||| |||||||| |||| | |||||||| ||||||||| |  ||||| | ||| | | ||||||    
T  25899 cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaaattcattctacaatctt 25800  T
Q  300 tccaggttcaatctcatc 317  Q
    | ||||||||||||||||    
T  25799 ttcaggttcaatctcatc 25782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 6156 - 6100
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattct 215  Q
    ||||| |||||| ||||||||||||||| | |||||||||||||||||||| |||||    
T  6156 gatcatctcacatcaactcgtgcgacaaaggtcacatttaacctaacaaggtattct 6100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 10158 - 10261
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggc 259  Q
    |||||||| |||||||||| |||||| |||| |||||||||| ||||||||||||||||        |||||||||||| |||||||| |||| ||||||    
T  10158 tcaactcataacaactcgtacgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggc 10257  T
Q  260 gagt 263  Q
    ||||    
T  10258 gagt 10261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 317
Target Start/End: Original strand, 8724 - 8879
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcg 260  Q
    ||||||| ||||||||||||| |||| | || ||   ||||||||||| || ||||| | ||| |   |||||||||| ||||||||||| | | |||||    
T  8724 tcaactctcaacaactcgtgcaacaaaggtcgcaa--aacctaacaagacactctgtttctgggtcattcgcgaggcgagagcctctactggccgtggcg 8821  T
Q  261 agtacaggtcagaatcacaaaag-tccatcccataatctttccaggttcaatctcatc 317  Q
    ||| |||||||||||| || ||| |||||   | |||||||| |||||||||||||||    
T  8822 agttcaggtcagaatcccacaagttccattttacaatctttctaggttcaatctcatc 8879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 12681 - 12579
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcg 260  Q
    |||||||| |||||||||||||||||| ||| ||||||||||||  | |||||||||| |      ||| |||||||| |||||||| |||| |||||||    
T  12681 tcaactcataacaactcgtgcgacaagaatcgcatttaacctaaacaagcattctgtaatactagtgcttgcgaggcgagagcctctgctcgccatggcg 12582  T
Q  261 agt 263  Q
    |||    
T  12581 agt 12579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 316
Target Start/End: Complemental strand, 16431 - 16317
Alignment:
Q  203 aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatctttc 301  Q
    ||||||||| ||||| ||||| |  ||||||||||| |||||||| |||| |||||||||| ||||| ||| |  |||| | | ||| | | ||||||||    
T  16431 aacaaggcactctgtttttgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggttagatttccaaacgtttcattcgaaaatctttc 16332  T
Q  302 caggttcaatctcat 316  Q
    |||||||||||||||    
T  16331 caggttcaatctcat 16317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 78569 - 78619
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaagg 209  Q
    |||||||||||| |||||| |||||||| | ||||||||||||||||||||    
T  78569 gatcaactcacatcaactcatgcgacaaaggtcacatttaacctaacaagg 78619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 3195 - 3288
Alignment:
Q  177 cgtgcgacaaggatcacatttaacctaa-caaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggt 269  Q
    |||||||||| |||| |||||||||||| ||||||||||||||  | || |  || ||||||| | ||||||||||| |||||||||| |||||    
T  3195 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaactagtcaattcacgaggcgagggcctctactcgccatggcgagttcaggt 3288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 317
Target Start/End: Original strand, 3754 - 3874
Alignment:
Q  198 aacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataat 296  Q
    ||||||||||  || ||||| ||||| |  ||||||||||| |||||||| |||| | |||||||| |||||||||||| || ||| |  || | | |||    
T  3754 aacctaacaactcactctgtttttgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttgattctacaat 3853  T
Q  297 ctttccaggttcaatctcatc 317  Q
    | |||||||||||||||||||    
T  3854 cattccaggttcaatctcatc 3874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 38565 - 38669
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatgg 258  Q
    |||||||||||| |||||||||||| || | || ||||||||| ||||||| ||||||| |       |||||||||||| |||||||||||||  ||||    
T  38565 gatcaactcacatcaactcgtgcgataaaggtctcatttaacccaacaaggtattctgtctcacaagggctcgcgaggcgagagcctctactcgctatgg 38664  T
Q  259 cgagt 263  Q
    |||||    
T  38665 cgagt 38669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 317
Target Start/End: Complemental strand, 8369 - 8249
Alignment:
Q  198 aacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaagtc-catcccataat 296  Q
    ||||||||||| || ||||| | ||| |  ||||||||||| ||||||||||||  | ||||||||  ||| ||||||  |||||||  ||| | | |||    
T  8369 aacctaacaagacactctgtttctgggtcactcgcgaggcgagagcctctactcaccgtggcgagtttaggccagaattccaaaagtttcattctacaat 8270  T
Q  297 ctttccaggttcaatctcatc 317  Q
    |||||||||||||||||||||    
T  8269 ctttccaggttcaatctcatc 8249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 26836 - 26892
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctg 216  Q
    |||||| | ||||||||| ||||||| ||||||||||||||| ||||||||||||||    
T  26836 tcaacttataacaactcgcgcgacaaagatcacatttaacctaaacaaggcattctg 26892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 8156 - 8064
Alignment:
Q  172 caactcgtgcgacaaggatcacatttaacct-aacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgtcatggcgagt 263  Q
    ||||||||||||||| |||| |||||||||| ||||||||||||||||        |||||||||||| |||||||| |||| ||||||||||    
T  8156 caactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacactagtgctcgcgaggcgagagcctctgctcgccatggcgagt 8064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 53477 - 53395
Alignment:
Q  104 tcaggcttactagaacgtcaacaacaagctagacaacttagtccctaaaatctaagatcaactcacaacaactcgtgcgacaa 186  Q
    |||| |||||| |||| ||||||  ||| || ||||||||||  || |  ||||||||||||||||| |||||||||||||||    
T  53477 tcagtcttactggaacatcaacataaagataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaa 53395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 317
Target Start/End: Original strand, 13406 - 13496
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatctttccaggttcaatctcatc 317  Q
    ||||||||||| |||||||| |||| | |||||||| |||||||||||| || ||| | ||| | | ||||||| ||| ||||||||||||    
T  13406 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatcttttcagattcaatctcatc 13496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 7644 - 7586
Alignment:
Q  161 tcaactcacaacaactcgtgcgacaaggatcacatttaacct-aacaaggcattctgta 218  Q
    |||||||| |||||||||| | ||||||||| |||||||||| |||| |||||||||||    
T  7644 tcaactcataacaactcgtactacaaggatctcatttaacctaaacatggcattctgta 7586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 2136 - 2182
Alignment:
Q  227 gctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcaga 273  Q
    |||||||||||| |||| |||||||| ||||||||||||| ||||||    
T  2136 gctcgcgaggcgagagcatctactcgccatggcgagtacaagtcaga 2182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 9818 - 9864
Alignment:
Q  227 gctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcaga 273  Q
    |||||||||||| |||| |||||||| ||||||||||||| ||||||    
T  9818 gctcgcgaggcgagagcatctactcgccatggcgagtacaagtcaga 9864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 253 - 298
Alignment:
Q  231 gcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    |||||||| |||||||| |||| |||||||||| ||||||||||||    
T  253 gcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatc 298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 5029 - 5074
Alignment:
Q  231 gcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    |||||||| |||||||| |||| |||||||||| ||||||||||||    
T  5029 gcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatc 5074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 263
Target Start/End: Complemental strand, 2324 - 2215
Alignment:
Q  154 tctaagatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaaggcattctgtatttggttagctcgcgaggcgggagcctctactcgt 253  Q
    |||||||||||||||||  ||||||  || ||| |||| |||| ||||||| |||||||||||||        |||||||||||| |||||||| ||||     
T  2324 tctaagatcaactcacataaactcgaacggcaaagatcgcattcaacctaaaaaggcattctgtaacacacacgctcgcgaggcgagagcctctgctcgc 2225  T
Q  254 catggcgagt 263  Q
    ||||||||||    
T  2224 catggcgagt 2215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 316
Target Start/End: Original strand, 39075 - 39162
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatcacaaaag-tccatcccataatctttccaggttcaatctcat 316  Q
    ||||||||||| |||||||| |||| | |||||||| |||||||||||| || ||| | |||  || |||||||||||||||||||||||    
T  39075 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatc-cacaagtttcat-tcaaaatctttccaggttcaatctcat 39162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 20228 - 20187
Alignment:
Q  231 gcgaggcgggagcctctactcgtcatggcgagtacaggtcag 272  Q
    |||||||| ||||||||||||| |||||||||| ||||||||    
T  20228 gcgaggcgagagcctctactcgccatggcgagttcaggtcag 20187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 97253 - 97302
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaag 208  Q
    |||||||||||| ||||||||||||||| | ||||||||| |||| ||||    
T  97253 gatcaactcacatcaactcgtgcgacaaaggtcacatttatcctagcaag 97302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 106531 - 106580
Alignment:
Q  159 gatcaactcacaacaactcgtgcgacaaggatcacatttaacctaacaag 208  Q
    |||||||||||| ||||||||||||||| | ||||||||| |||| ||||    
T  106531 gatcaactcacatcaactcgtgcgacaaaggtcacatttatcctagcaag 106580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 267911 - 267948
Alignment:
Q  172 caactcgtgcgacaaggatcacatttaacctaacaagg 209  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  267911 caactcgtgcgacaaaggtcacatttaacctaacaagg 267948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 856 - 808
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    ||||||||||| |||||||| |||| | |||||||| ||||||||||||    
T  856 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatc 808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 12244 - 12288
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcag 272  Q
    ||||||||| | ||||||||||||| |||||||||| ||||||||    
T  12244 ctcgcgaggtgagagcctctactcgccatggcgagttcaggtcag 12288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 3795 - 3843
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    |||||||| || |||||||| |||| |||||||||| ||||||||||||    
T  3795 ctcgcgagacgagagcctctgctcgccatggcgagttcaggtcagaatc 3843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 7859 - 7907
Alignment:
Q  228 ctcgcgaggcgggagcctctactcgtcatggcgagtacaggtcagaatc 276  Q
    |||||||| || |||||||| |||| |||||||||| ||||||||||||    
T  7859 ctcgcgagacgagagcctctgctcgccatggcgagttcaggtcagaatc 7907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University