View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17255_low_3 (Length: 651)
Name: NF17255_low_3
Description: NF17255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17255_low_3 |
 | |
|
| [»] scaffold1207 (1 HSPs) |
| | |
|
| [»] scaffold0734 (2 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 409; Significance: 0; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 160 - 636
Target Start/End: Complemental strand, 11171219 - 11170743
Alignment:
| Q |
160 |
attcataaagcgatccaannnnnnnncatagtgtacacaactctcttttgttttgtagatgcaaagaggctaattggtcggaaatttagtgatcccatag |
259 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11171219 |
attcataaagcgatccaattgtttttcatagtgtacacaactctcttttgttttgtagatgcaaagaggctaattggtcggaaatttagtgatcccatag |
11171120 |
T |
|
| Q |
260 |
tacaaagtgatgtgaagttgtggccattcaaagtaattggtgacctgaatgacaaacctatgattgttgttaactataatgacgaggaaaagcattttgc |
359 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
11171119 |
tacaaagtgatgtgaagttgtggccattcaaagtaattggtgacctgaatgacaaacccatgattgttgttaactataatgacgaggaaaaacattttgc |
11171020 |
T |
|
| Q |
360 |
tgcagaacaaatttcatccatggtattggcgaaaatgcgtgagatagcagaagccttccttggatcaacagtggaggatgtcgttataactgtgcctgca |
459 |
Q |
| |
|
||| ||| |||| |||||||||||||||| ||||||||| |||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
11171019 |
tgctgaagaaatctcatccatggtattggtgaaaatgcgcgagatagcagaaaccttccttggatcaatagtggaggatgttgttataactgtgcctgca |
11170920 |
T |
|
| Q |
460 |
tactttaatgactcacaacgccagtctactcgagatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattg |
559 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11170919 |
tactttaatgactcacaacgccagtctactcgagatgcgggtgctattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattg |
11170820 |
T |
|
| Q |
560 |
catatggccttgacttgaaaccatttaatcatggatgtagaaatgttttcatttttgacttaggtggtggtactttg |
636 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11170819 |
catatggccttgacttgaaaccatttaatcatggatgtagaaatgttttcatttttgacttaggtggtggtactttg |
11170743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 189 - 636
Target Start/End: Complemental strand, 11210012 - 11209565
Alignment:
| Q |
189 |
agtgtacacaactctcttttgttttgtagatgcaaagaggctaattggtcggaaatttagtgatcccatagtacaaagtgatgtgaagttgtggccattc |
288 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
11210012 |
agtgtacacaactctcttttgttttgtagatgcaaagaggctaattggtcggaaattttgcgaccccatagtagaaagtgatgtgaagttgtggccattc |
11209913 |
T |
|
| Q |
289 |
aaagtaattggtgacctgaatgacaaacctatgattgttgttaactataatgacgaggaaaagcattttgctgcagaacaaatttcatccatggtattgg |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| |||| |||||||||||||||| |
|
|
| T |
11209912 |
aaagtaattggcgacctaaatgacaaacccatgattgttgttaactataaagacgaggaaaagcattttgctgctgaagaaatctcatccatggtattgg |
11209813 |
T |
|
| Q |
389 |
cgaaaatgcgtgagatagcagaagccttccttggatcaacagtggaggatgtcgttataactgtgcctgcatactttaatgactcacaacgccagtctac |
488 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11209812 |
cgaaaatgcgagagacagcagaagccttccttggatcaacagtggatgatgttgttataactgtgcctgcatactttaatgactcacaacgccagtctac |
11209713 |
T |
|
| Q |
489 |
tcgagatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaat |
588 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| |
|
|
| T |
11209712 |
tcgagatgcgggtgctattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggctttggcatgaaaccatttaat |
11209613 |
T |
|
| Q |
589 |
catggatgtagaaatgttttcatttttgacttaggtggtggtactttg |
636 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
11209612 |
catggacgtagaaatgttttcatatttgacttaggtggtggtactttg |
11209565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 201 - 636
Target Start/End: Complemental strand, 11276562 - 11276127
Alignment:
| Q |
201 |
tctcttttgttttgtagatgcaaagaggctaattggtcggaaatttagtgatcccatagtacaaagtgatgtgaagttgtggccattcaaagtaattggt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11276562 |
tctcttttgttttgtagatgcaaagaggctaattggtcggaaatttagtgatcccatagtacaaagtgatgtgaagttgtggccattcaaagtaattggt |
11276463 |
T |
|
| Q |
301 |
gacctgaatgacaaacctatgattgttgttaactataatgacgaggaaaagcattttgctgcagaacaaatttcatccatggtattggcgaaaatgcgtg |
400 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||| |||| |||||||||||||||||||||||||| | |
|
|
| T |
11276462 |
gacctgaatgacaaacccatgattgttgttaactataatgacgaggaaaagcattttactgctgaagaaatctcatccatggtattggcgaaaatgcgcg |
11276363 |
T |
|
| Q |
401 |
agatagcagaagccttccttggatcaacagtggaggatgtcgttataactgtgcctgcatactttaatgactcacaacgccagtctactcgagatgcggg |
500 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
11276362 |
agatagcagaagccttccttggattaacagtggaggatgttgttataactgtgcctgcatactttaatgactcacagcgccagtctactcgagatgcggg |
11276263 |
T |
|
| Q |
501 |
tgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatggatgtaga |
600 |
Q |
| |
|
||| ||||||||||| || ||| |||||||| | ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||| |
|
|
| T |
11276262 |
tgctattgctggcctaaacgttatgcgaataataaatgagcctactgcagctgcaattgcatatggctttaacacgaaaccatttaatcatggatgtaga |
11276163 |
T |
|
| Q |
601 |
aatgttttcatttttgacttaggtggtggtactttg |
636 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| |
|
|
| T |
11276162 |
aatgttttcatatttgacttaggtggtggtactttg |
11276127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 206 - 633
Target Start/End: Complemental strand, 11197326 - 11196899
Alignment:
| Q |
206 |
tttgttttgtagatgcaaagaggctaattggtcggaaatttagtgatcccatagtacaaagtgatgtgaagttgtggccattcaaagtaattggtgacct |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| ||| | || | || |||||||||||| |||||| |||||| |||||||||||||| ||||| |
|
|
| T |
11197326 |
tttgttttgtagatgcaaagaggctaattggtaggaagttttgcgactcaatcgtacaaagtgatatgaagtcgtggcccttcaaagtaattggcgacct |
11197227 |
T |
|
| Q |
306 |
gaatgacaaacctatgattgttgttaactataatgacgaggaaaagcattttgctgcagaacaaatttcatccatggtattggcgaaaatgcgtgagata |
405 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||||||| |||||| |||||| |
|
|
| T |
11197226 |
caatgacaaacccatgattgttgttaactataatgacgaggaaaagcattttgctgctgaagaaatctcatcgatggtattggcaaaaatggccgagata |
11197127 |
T |
|
| Q |
406 |
gcagaagccttccttggatcaacagtggaggatgtcgttataactgtgcctgcatactttaatgactcacaacgccagtctactcgagatgcgggtgcca |
505 |
Q |
| |
|
|| ||||| | |||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| | |
|
|
| T |
11197126 |
gctgaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccagtccactcgagatgcgggtgtta |
11197027 |
T |
|
| Q |
506 |
ttgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatggatgtagaaatgt |
605 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| |||| |
|
|
| T |
11197026 |
ttgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtagacatgt |
11196927 |
T |
|
| Q |
606 |
tttcatttttgacttaggtggtggtact |
633 |
Q |
| |
|
|||||||||||| ||||||||||||||| |
|
|
| T |
11196926 |
tttcatttttgatttaggtggtggtact |
11196899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 186 - 636
Target Start/End: Complemental strand, 11156895 - 11156443
Alignment:
| Q |
186 |
catagtgtacacaactctctt--ttgttttgtagatgcaaagaggctaattggtcggaaatttagtgatcccatagtacaaagtgatgtgaagttgtggc |
283 |
Q |
| |
|
|||||||||| ||||||| || ||||||||||||||||||||||||||||||| |||| ||| | || | || |||||||||||| |||||| ||||| |
|
|
| T |
11156895 |
catagtgtactcaactcttttgtttgttttgtagatgcaaagaggctaattggtaggaagttttgcgactcaatcgtacaaagtgatatgaagtcgtggc |
11156796 |
T |
|
| Q |
284 |
cattcaaagtaattggtgacctgaatgacaaacctatgattgttgttaactataatgacgaggaaaagcattttgctgcagaacaaatttcatccatggt |
383 |
Q |
| |
|
| |||||||||||||| |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||| ||||| |
|
|
| T |
11156795 |
ccttcaaagtaattggcaacctcaatgacaaacccatgattgttgttaactataaagacgaggaaaagcattttgctgctgaagaaatctcatcgatggt |
11156696 |
T |
|
| Q |
384 |
attggcgaaaatgcgtgagatagcagaagccttccttggatcaacagtggaggatgtcgttataactgtgcctgcatactttaatgactcacaacgccag |
483 |
Q |
| |
|
|||||| |||||| |||||||| |||| | |||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
11156695 |
attggcaaaaatggccgagatagctgaagtttaccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccag |
11156596 |
T |
|
| Q |
484 |
tctactcgagatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccat |
583 |
Q |
| |
|
|| || | ||||||||||| |||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||| | |
|
|
| T |
11156595 |
tccacccaagatgcgggtgttattgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaacctt |
11156496 |
T |
|
| Q |
584 |
ttaatcatggatgtagaaatgttttcatttttgacttaggtggtggtactttg |
636 |
Q |
| |
|
||||||||||||||| | |||||||||||||||| ||||| |||||||||||| |
|
|
| T |
11156495 |
ttaatcatggatgtaaacatgttttcatttttgatttaggaggtggtactttg |
11156443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 206 - 633
Target Start/End: Original strand, 11241005 - 11241438
Alignment:
| Q |
206 |
tttgttttgtagatgcaaagaggctaattggtcggaaattta------gtgatcccatagtacaaagtgatgtgaagttgtggccattcaaagtaattgg |
299 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| |||| |||| ||||| ||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
11241005 |
tttgttttgtagatgcaaagaggctaattggtaggaagtttaagttttgtgaccccatcatacaaagtgatatgaagttgtggcccttcaaagtaattgg |
11241104 |
T |
|
| Q |
300 |
tgacctgaatgacaaacctatgattgttgttaactataatgacgaggaaaagcattttgctgcagaacaaatttcatccatggtattggcgaaaatgcgt |
399 |
Q |
| |
|
|||||||||||||||| |||| | ||||||||||||||||||||||||||||||| ||||| ||| |||| ||||| ||||||||||| |||||| |
|
|
| T |
11241105 |
cgacctgaatgacaaacacatgactattgttaactataatgacgaggaaaagcatttcgctgctgaagaaatctcatcgatggtattggcaaaaatggcc |
11241204 |
T |
|
| Q |
400 |
gagatagcagaagccttccttggatcaacagtggaggatgtcgttataactgtgcctgcatactttaatgactcacaacgccagtctactcgagatgcgg |
499 |
Q |
| |
|
||||||| ||||| | |||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
11241205 |
aagatagctgaagcttaccttggatcaacagtgaaggatgttgttataactgtgcctgcttactttaatgactcacaacgccagtctattcgagatgcgg |
11241304 |
T |
|
| Q |
500 |
gtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatggatgtag |
599 |
Q |
| |
|
|||| |||||||||||||| |||||| ||||| ||| |||||||||||||| ||||||||||||||||||| || ||||| | |||||||||||||||| |
|
|
| T |
11241305 |
gtgctattgctggcctcaaagttttgtgaataatcactgagcctactgcagttgcaattgcatatggccttaacatgaaaactcttaatcatggatgtag |
11241404 |
T |
|
| Q |
600 |
aaatgttttcatttttgacttaggtggtggtact |
633 |
Q |
| |
|
| ||||| | ||||| || ||||||||||||||| |
|
|
| T |
11241405 |
acatgttctaattttcgatttaggtggtggtact |
11241438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 307 - 633
Target Start/End: Complemental strand, 11200394 - 11200064
Alignment:
| Q |
307 |
aatgacaaacctatgattgttgttaactataatgacgaggaaaagcattttgctgcagaacaaatttcatccatggtattggcgaaaatgcgtgagatag |
406 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| | |||||| | ||||| | |
|
|
| T |
11200394 |
aatgacaaacccatgattgttgttaactataatgacgaggaaaagcattttgctgcagaagaaatctcatccatggtattgacaaaaatgggcgagattg |
11200295 |
T |
|
| Q |
407 |
cagaagccttccttggatcaacagtggaggatgtcgttataactgtgcctgcatactttaatgactcacaacg----ccagtctactcgagatgcgggtg |
502 |
Q |
| |
|
| ||||| | |||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||||| |||||||||| |||||||||||| |
|
|
| T |
11200294 |
ctgaagcttaccttggatcaacagtgaaggatgttgttataattgtgcctacatactttaatgattcacaacgtacgccagtctacttgagatgcgggtg |
11200195 |
T |
|
| Q |
503 |
ccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatggatgtagaaa |
602 |
Q |
| |
|
| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |
|
|
| T |
11200194 |
ctattgctggcctcaatgttttgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgacatgaaaccttttaatcatggatgtagaaa |
11200095 |
T |
|
| Q |
603 |
tgttttcatttttgacttaggtggtggtact |
633 |
Q |
| |
|
||||||||||||| | ||||||||||||||| |
|
|
| T |
11200094 |
tgttttcattttttatttaggtggtggtact |
11200064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 307 - 636
Target Start/End: Complemental strand, 11161651 - 11161310
Alignment:
| Q |
307 |
aatgacaaacctatgattgttgttaactataatgacgaggaaaagcattttgctgcagaacaaatttcatccatggtattggcgaaaatgcgtgagatag |
406 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| | |||||| | ||||| | |
|
|
| T |
11161651 |
aatgacaaacccatgattgttgttaactataatgacgaggaaaagcattttgctgcagaagaaatctcatccatggtattgacaaaaatgggcgagattg |
11161552 |
T |
|
| Q |
407 |
cagaagccttccttggatcaacagtggaggatgtcgttataactgtgcctgcatactttaatgactcaca----acgccagtctactcgagatgcgggtg |
502 |
Q |
| |
|
| ||||| | |||||||||||||||| ||||||| ||||||| ||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
11161551 |
ctgaagcttaccttggatcaacagtgaaggatgttgttataattgtgcctacatactttaatgtttcacaacgtacgccagtctactcgagatgcgggtg |
11161452 |
T |
|
| Q |
503 |
ccattgctggcctcaatgttttgcgaatactcaatg--------agcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatgga |
594 |
Q |
| |
|
| |||| |||||| |||||| ||||| || |||||| |||||||||||| ||||||||||||||| |||||| ||||||| |||||||||||| |
|
|
| T |
11161451 |
ctattgttggccttaatgttatgcgagtaatcaatgactctactagcctactgcagatgcaattgcatatggtcttgacatgaaaccttttaatcatgga |
11161352 |
T |
|
| Q |
595 |
tgtagaaatgttttcatttttgacttaggtggtggtactttg |
636 |
Q |
| |
|
|||| | |||||||||||||| | |||||||||||||||||| |
|
|
| T |
11161351 |
tgtatacatgttttcattttttatttaggtggtggtactttg |
11161310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 210 - 592
Target Start/End: Complemental strand, 11133593 - 11133211
Alignment:
| Q |
210 |
ttttgtagatgcaaagaggctaattggtcggaaatttagtgatcccatagtacaaagtgatgtgaagttgtggccattcaaagtaattggtgacctgaat |
309 |
Q |
| |
|
|||||||||||| |||||||| |||||| | |||||||||| || ||||| || |||||| |||| ||||||||||| ||||||||||||| | | ||| |
|
|
| T |
11133593 |
ttttgtagatgcgaagaggctcattggtagagaatttagtgaccctatagttcagagtgatatgaaattgtggccatttaaagtaattggtggcataaat |
11133494 |
T |
|
| Q |
310 |
gacaaacctatgattgttgttaactataatgacgaggaaaagcattttgctgcagaacaaatttcatccatggtattggcgaaaatgcgtgagatagcag |
409 |
Q |
| |
|
|||||||| | |||||||| || || |||| |||||||| ||||||||||| || |||| ||||| ||||||||| | ||||| |||||||| |||| |
|
|
| T |
11133493 |
gacaaacccaatattgttgtcaattacaatggagaggaaaaacattttgctgctgaggaaatatcatcaatggtattgacaaaaattcgtgagattgcag |
11133394 |
T |
|
| Q |
410 |
aagccttccttggatcaacagtggaggatgtcgttataactgtgcctgcatactttaatgactcacaacgccagtctactcgagatgcgggtgccattgc |
509 |
Q |
| |
|
||| | |||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||| ||||||| |||| ||||| |
|
|
| T |
11133393 |
aagtttaccttggatcaacagtgaaggatgtcgttataactgttcctgcttactttaatgactcgcaacgccaagctactagagatgcaggtgttattgc |
11133294 |
T |
|
| Q |
510 |
tggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccatttaatcatg |
592 |
Q |
| |
|
|| ||||| ||| |||||||| |||| |||||||| |||||||||||||||||||| |||||| |||||| |||||||||| |
|
|
| T |
11133293 |
aggtctcaacgttatgcgaataatcaacgagcctacagcagctgcaattgcatatggtcttgacaagaaaccgtttaatcatg |
11133211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 11171371 - 11171285
Alignment:
| Q |
28 |
atttgttattgttttttataagggaccaaaatcccaagattgtatttcttatagggttaaatatataagagtattttctatacaagc |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
11171371 |
atttgttattgttttttataagggaccaaaatcccaagattgtattacttacggggttaaatatataatagtattttctatacaagc |
11171285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 8382146 - 8382104
Alignment:
| Q |
28 |
atttgttattgttttttataagggaccaaaatcccaagattgt |
70 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
8382146 |
atttgttattgttttttataagggatcaaaattgcaagattgt |
8382104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1207 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: scaffold1207
Description:
Target: scaffold1207; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 186 - 636
Target Start/End: Complemental strand, 1490 - 1061
Alignment:
| Q |
186 |
catagtgtacacaactctcttttgttttgtagatgcaaagaggctaattggtcggaaatttagtgatcccatagtacaaagtgatgtgaagttgtggcca |
285 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
1490 |
catagtgtacacaactctcttttgttttgtagatgcaaagaggctaattggtcggaaattttgcgatcccatagtagaaagtgatgtgaagttgtggcca |
1391 |
T |
|
| Q |
286 |
ttcaaagtaattggtgacctgaatgacaaacctatgattgttgttaactataatgacgaggaaaagcattttgctgcagaacaaatttcatccatggtat |
385 |
Q |
| |
|
|||| | | ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| |
|
|
| T |
1390 |
ttcatac------------------ataaacccatgattgttgttaactataatgacgaggaaaagcattttgctgctgaagaaatctcatccatggtat |
1309 |
T |
|
| Q |
386 |
tggcgaaaatgcgtgagatagcagaagccttccttggatcaacagtggaggatgtcgttataactgtgcctgcatactttaatgactcacaacgccagtc |
485 |
Q |
| |
|
||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
1308 |
tggcgaaaatgcgcgagacagcagaagccttccttggatcaacagtggaggatgttgttataactgtgcctgcatactttaatgactcacaacgccaatc |
1209 |
T |
|
| Q |
486 |
tactcgagatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgacttgaaaccattt |
585 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
1208 |
tactcgagatgcaggtgctattgctggcctcaatgttttgggaatactcaatgagcctactgcagctgcaattgcatatggctttgacacaaaaccat-- |
1111 |
T |
|
| Q |
586 |
aatcatggatgtagaaatgttttcatttttgacttaggtggtggtactttg |
636 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1110 |
-cacatggacatagaaatgttttcatttttgacttaggtggtggtactttg |
1061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 19)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 492 - 570
Target Start/End: Complemental strand, 8602291 - 8602213
Alignment:
| Q |
492 |
agatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggcctt |
570 |
Q |
| |
|
|||||| |||||||||||||| |||||||| |||| ||| |||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
8602291 |
agatgctggtgccattgctggtctcaatgtaatgcggataatcaatgagccaactgcagctgctcttgcatatggcctt |
8602213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 492 - 570
Target Start/End: Original strand, 8382727 - 8382805
Alignment:
| Q |
492 |
agatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggcctt |
570 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| |||| ||| |||||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
8382727 |
agatgctggtgcgattgctggcctcaatgtaatgcggataatcaatgagccaactgccgctgctcttgcatatggcctt |
8382805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 573
Target Start/End: Original strand, 8585558 - 8585638
Alignment:
| Q |
493 |
gatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
573 |
Q |
| |
|
||||| ||||||||||||||||| |||||| || | ||| ||||||| || ||||| || || |||||||||||||||||| |
|
|
| T |
8585558 |
gatgctggtgccattgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttgac |
8585638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 573
Target Start/End: Complemental strand, 8628847 - 8628768
Alignment:
| Q |
494 |
atgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
573 |
Q |
| |
|
|||| ||||||||||||||||| |||||| || | ||| ||||||| || ||||| || || |||||||||||||||||| |
|
|
| T |
8628847 |
atgctggtgccattgctggccttaatgttatgaggataatcaatgaccccactgctgcagctattgcatatggccttgac |
8628768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 41415715 - 41415672
Alignment:
| Q |
27 |
aatttgttattgttttttataagggaccaaaatcccaagattgt |
70 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
41415715 |
aatttgttattgttttttataaggggccaaaatcgcaagattgt |
41415672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 2407400 - 2407358
Alignment:
| Q |
28 |
atttgttattgttttttataagggaccaaaatcccaagattgt |
70 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
2407400 |
atttgttattgttttttataggggaccaaaatcgcaagattgt |
2407358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 7875758 - 7875716
Alignment:
| Q |
28 |
atttgttattgttttttataagggaccaaaatcccaagattgt |
70 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
7875758 |
atttgttattgttttttataggggaccaaaatcgcaagattgt |
7875716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 573
Target Start/End: Original strand, 27830733 - 27830807
Alignment:
| Q |
499 |
ggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
573 |
Q |
| |
|
||||||||||||||||| |||||| |||| ||| | | ||||||||||| || || |||||||||||||||||| |
|
|
| T |
27830733 |
ggtgccattgctggccttaatgttatgcggataataagcgagcctactgctgcagctattgcatatggccttgac |
27830807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 492 - 573
Target Start/End: Complemental strand, 8654767 - 8654686
Alignment:
| Q |
492 |
agatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
573 |
Q |
| |
|
|||||| |||||||||||||| || || || | || ||||||||||| |||||||| || || |||||||||||||||||| |
|
|
| T |
8654767 |
agatgctggtgccattgctggacttaacgtcattcggatactcaatgaacctactgccgcagctattgcatatggccttgac |
8654686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 492 - 573
Target Start/End: Original strand, 13333307 - 13333388
Alignment:
| Q |
492 |
agatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
573 |
Q |
| |
|
|||||| ||||| ||||||||||| ||| | | |||||| ||||||| |||||||| || || |||||||||||||||||| |
|
|
| T |
13333307 |
agatgctggtgctattgctggccttaatatcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgac |
13333388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 492 - 572
Target Start/End: Complemental strand, 6789829 - 6789749
Alignment:
| Q |
492 |
agatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttga |
572 |
Q |
| |
|
|||||| |||||||||||||| || |||||| | |||||| ||||||| || || || ||||| |||||||||||||||| |
|
|
| T |
6789829 |
agatgctggtgccattgctggtcttaatgttatacgaataatcaatgaaccaacagctgctgctcttgcatatggccttga |
6789749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 493 - 573
Target Start/End: Original strand, 10494226 - 10494306
Alignment:
| Q |
493 |
gatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
573 |
Q |
| |
|
||||| ||||| ||||||||||| ||||| | || ||| ||||||| |||||||| || || |||||||||||||||||| |
|
|
| T |
10494226 |
gatgctggtgctattgctggccttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttgac |
10494306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 216 - 330
Target Start/End: Complemental strand, 6790105 - 6789991
Alignment:
| Q |
216 |
agatgcaaagaggctaattggtcggaaatttagtgatcccatagtacaaagtgatgtgaagttgtggccattcaaagtaattggtgacctgaatgacaaa |
315 |
Q |
| |
|
|||||| |||||| |||||||| |||| ||||||||| | | || |||| |||| ||| ||| ||||||||||| || |||| || | | |||||||| |
|
|
| T |
6790105 |
agatgctaagaggttaattggtaggaagtttagtgattctgttgttcaaaatgatatgatgttttggccattcaaggtcattgctggcgtcaatgacaag |
6790006 |
T |
|
| Q |
316 |
cctatgattgttgtt |
330 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
6790005 |
cccatgattgttgtt |
6789991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 492 - 570
Target Start/End: Complemental strand, 8538353 - 8538275
Alignment:
| Q |
492 |
agatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggcctt |
570 |
Q |
| |
|
|||||| |||| |||||||||||||||||| |||| ||| ||||||| ||||| || ||||| ||||||| |||||| |
|
|
| T |
8538353 |
agatgctggtgtcattgctggcctcaatgtaatgcggataatcaatgaacctacagctgctgctcttgcatacggcctt |
8538275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 8559932 - 8559870
Alignment:
| Q |
210 |
ttttgtagatgcaaagaggctaattggtcggaaatttagtgatcccatagtacaaagtgatgt |
272 |
Q |
| |
|
||||| ||||||||||||| ||||||| |||||| |||||| ||||||| ||||||||||| |
|
|
| T |
8559932 |
ttttgcagatgcaaagaggttaattggaaggaaatacagtgattccatagtccaaagtgatgt |
8559870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 8585281 - 8585355
Alignment:
| Q |
216 |
agatgcaaagaggctaattggtcggaaatttagtgatcccatagtacaaagtgatgtgaagttgtggccattcaa |
290 |
Q |
| |
|
|||||| |||||| |||||||| |||| |||||||||||| | || |||| |||| | | ||||||||||||||| |
|
|
| T |
8585281 |
agatgccaagaggttaattggtaggaagtttagtgatcccgttgttcaaaatgatataatgttgtggccattcaa |
8585355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 40352713 - 40352671
Alignment:
| Q |
28 |
atttgttattgttttttataagggaccaaaatcccaagattgt |
70 |
Q |
| |
|
|||||||||||||||||||| | |||||||||| ||||||||| |
|
|
| T |
40352713 |
atttgttattgttttttataggcgaccaaaatcgcaagattgt |
40352671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 324
Target Start/End: Complemental strand, 3147866 - 3147757
Alignment:
| Q |
215 |
tagatgcaaagaggctaattggtcggaaatttagtgatcccatagtacaaagtgatgtgaagttgtggccattcaaagtaattggtgacctgaatgacaa |
314 |
Q |
| |
|
|||||||||||||| |||||||| |||| ||| ||||| | | || |||| |||| ||| ||||||||||||||| || ||| | | |||||||||| |
|
|
| T |
3147866 |
tagatgcaaagaggttaattggtaggaagtttggtgattctgttgttcaaaatgatatgatgttgtggccattcaaggtcatttgcggagtgaatgacaa |
3147767 |
T |
|
| Q |
315 |
acctatgatt |
324 |
Q |
| |
|
||| |||||| |
|
|
| T |
3147766 |
acccatgatt |
3147757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 566
Target Start/End: Original strand, 29577533 - 29577594
Alignment:
| Q |
505 |
attgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatgg |
566 |
Q |
| |
|
||||||||||||||||| |||| ||| ||||||| || ||||| |||||| |||||||||| |
|
|
| T |
29577533 |
attgctggcctcaatgtaatgcggataatcaatgaaccaactgctgctgcacttgcatatgg |
29577594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0734 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0734
Description:
Target: scaffold0734; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 6770 - 6714
Alignment:
| Q |
189 |
agtgtacacaactct-ct-tttgttttgtagatgcaaagaggctaattggtcggaaa |
243 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6770 |
agtgtacacaactcttctgtttgttttgtagatgcaaagaggctaattggttggaaa |
6714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0734; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 1958 - 1916
Alignment:
| Q |
28 |
atttgttattgttttttataagggaccaaaatcccaagattgt |
70 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
1958 |
atttgttattgttttttataggggaccaaaatctcaagattgt |
1916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 37; Significance: 0.00000000002; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 573
Target Start/End: Original strand, 16661844 - 16661924
Alignment:
| Q |
493 |
gatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
573 |
Q |
| |
|
||||| ||||||||||||||||| || ||| || | ||| ||||||| || |||||||| || |||||||||||||||||| |
|
|
| T |
16661844 |
gatgctggtgccattgctggccttaacgttgtgaggataatcaatgaacccactgcagcagctattgcatatggccttgac |
16661924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 492 - 573
Target Start/End: Complemental strand, 7542543 - 7542462
Alignment:
| Q |
492 |
agatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
573 |
Q |
| |
|
||||||||||||||||||||||||||||||| || | | | ||||| |||||||| || || ||||||||||||||||| |
|
|
| T |
7542543 |
agatgcgggtgccattgctggcctcaatgttatgagggcaatgaatgaacctactgccgcagctgttgcatatggccttgac |
7542462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 573
Target Start/End: Original strand, 16657368 - 16657449
Alignment:
| Q |
492 |
agatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
573 |
Q |
| |
|
|||||| |||||||| |||||||| ||||| | ||||| ||||||| |||||||| || || ||||||||||| |||||| |
|
|
| T |
16657368 |
agatgctggtgccatcgctggccttaatgtcattcgaattatcaatgaacctactgctgcagctattgcatatggtcttgac |
16657449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 7542825 - 7542781
Alignment:
| Q |
210 |
ttttgtagatgcaaagaggctaattggtcggaaatttagtgatcc |
254 |
Q |
| |
|
|||||||||||| |||||| |||||||| |||| ||||||||||| |
|
|
| T |
7542825 |
ttttgtagatgctaagaggttaattggtaggaagtttagtgatcc |
7542781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 493 - 572
Target Start/End: Complemental strand, 30775568 - 30775489
Alignment:
| Q |
493 |
gatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttga |
572 |
Q |
| |
|
||||| |||||||||||||| || |||||| || ||||| | |||||||| |||||||| || ||||||||||| ||||| |
|
|
| T |
30775568 |
gatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttga |
30775489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 492 - 572
Target Start/End: Original strand, 9335742 - 9335822
Alignment:
| Q |
492 |
agatgcgggtgccattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttga |
572 |
Q |
| |
|
|||||| ||| | ||||||||||| ||||| | || ||| ||||||| |||||||| || || ||||||||||||||||| |
|
|
| T |
9335742 |
agatgctggtactattgctggccttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttga |
9335822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 5003569 - 5003527
Alignment:
| Q |
28 |
atttgttattgttttttataagggaccaaaatcccaagattgt |
70 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
5003569 |
atttgttattgttttttataagggatcaaaatcgcaagattgt |
5003527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000004; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 573
Target Start/End: Original strand, 34466657 - 34466725
Alignment:
| Q |
505 |
attgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
573 |
Q |
| |
|
||||||||||| |||||||||| |||| ||||||| || ||||| || || ||||||||||| |||||| |
|
|
| T |
34466657 |
attgctggccttaatgttttgcaaataatcaatgaacccactgctgcagctattgcatatggacttgac |
34466725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 33096100 - 33096059
Alignment:
| Q |
28 |
atttgttattgttttttataagggaccaaaatcccaagattg |
69 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
33096100 |
atttgttattattttttataagggaccaaaattgcaagattg |
33096059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 332
Target Start/End: Complemental strand, 15595571 - 15595516
Alignment:
| Q |
274 |
aagttgtggccattcaaagtaattggtgacctgaatgacaaacctatgattgttgttaa |
332 |
Q |
| |
|
||||||||||||||||| || ||||||| ||||||||||||| |||||| ||||||| |
|
|
| T |
15595571 |
aagttgtggccattcaaggtcattggtg---tgaatgacaaacccatgattattgttaa |
15595516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 18896501 - 18896459
Alignment:
| Q |
28 |
atttgttattgttttttataagggaccaaaatcccaagattgt |
70 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
18896501 |
atttattattgttttttataggggaccaaaatcgcaagattgt |
18896459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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