View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17256_high_14 (Length: 249)

Name: NF17256_high_14
Description: NF17256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17256_high_14
NF17256_high_14
[»] chr1 (35 HSPs)
chr1 (135-207)||(45536770-45536842)
chr1 (147-230)||(33004015-33004098)
chr1 (147-236)||(8764010-8764099)
chr1 (147-236)||(43959821-43959910)
chr1 (147-236)||(50503361-50503450)
chr1 (147-229)||(37339846-37339928)
chr1 (147-232)||(10172971-10173056)
chr1 (147-236)||(17642004-17642093)
chr1 (147-236)||(18915886-18915975)
chr1 (147-231)||(26325836-26325920)
chr1 (18-87)||(45542275-45542344)
chr1 (146-231)||(16263569-16263654)
chr1 (146-231)||(21849204-21849289)
chr1 (147-236)||(41663856-41663945)
chr1 (147-232)||(50371834-50371919)
chr1 (147-223)||(4581682-4581758)
chr1 (147-230)||(49078139-49078222)
chr1 (147-216)||(6899597-6899666)
chr1 (147-236)||(32142846-32142935)
chr1 (147-235)||(2567296-2567384)
chr1 (147-231)||(10422812-10422896)
chr1 (147-231)||(30927727-30927811)
chr1 (147-231)||(45361882-45361966)
chr1 (157-236)||(14254278-14254357)
chr1 (147-230)||(14357780-14357863)
chr1 (147-230)||(16956491-16956574)
chr1 (147-234)||(44969685-44969772)
chr1 (146-236)||(5504050-5504140)
chr1 (197-231)||(5855546-5855580)
chr1 (175-229)||(33418143-33418197)
chr1 (147-237)||(34697353-34697443)
chr1 (196-237)||(12036793-12036834)
chr1 (175-228)||(33498867-33498920)
chr1 (150-230)||(17092480-17092560)
chr1 (147-227)||(34719804-34719884)
[»] chr2 (42 HSPs)
chr2 (147-236)||(44139502-44139591)
chr2 (147-231)||(27725963-27726047)
chr2 (147-237)||(25540403-25540493)
chr2 (147-236)||(34722698-34722787)
chr2 (147-231)||(10823083-10823167)
chr2 (147-230)||(12455334-12455417)
chr2 (147-231)||(20116611-20116695)
chr2 (147-236)||(8410149-8410238)
chr2 (147-231)||(35946761-35946845)
chr2 (147-231)||(38962786-38962870)
chr2 (148-231)||(43303292-43303375)
chr2 (147-236)||(6358150-6358239)
chr2 (147-236)||(16325613-16325702)
chr2 (147-236)||(41031905-41031994)
chr2 (147-231)||(16034960-16035044)
chr2 (147-231)||(18902529-18902613)
chr2 (147-231)||(38005425-38005509)
chr2 (147-231)||(44945616-44945700)
chr2 (147-230)||(9360747-9360830)
chr2 (146-236)||(12864242-12864332)
chr2 (185-231)||(45263704-45263750)
chr2 (146-231)||(14169607-14169692)
chr2 (147-236)||(28616378-28616467)
chr2 (147-231)||(3643886-3643970)
chr2 (147-231)||(3811690-3811774)
chr2 (196-236)||(10669610-10669650)
chr2 (197-233)||(13104874-13104910)
chr2 (148-231)||(20612534-20612618)
chr2 (147-231)||(37560196-37560280)
chr2 (147-231)||(41220658-41220742)
chr2 (147-230)||(28525454-28525537)
chr2 (185-236)||(42770688-42770739)
chr2 (147-190)||(44193546-44193589)
chr2 (158-236)||(10026626-10026704)
chr2 (184-234)||(21180350-21180400)
chr2 (175-236)||(331519-331580)
chr2 (147-236)||(11069896-11069985)
chr2 (147-236)||(22593153-22593240)
chr2 (179-236)||(29653645-29653702)
chr2 (147-231)||(7747297-7747381)
chr2 (146-230)||(21286468-21286552)
chr2 (146-230)||(39806883-39806967)
[»] scaffold0376 (1 HSPs)
scaffold0376 (146-231)||(12696-12781)
[»] chr8 (18 HSPs)
chr8 (147-236)||(43032923-43033012)
chr8 (147-231)||(2964103-2964187)
chr8 (148-231)||(15884556-15884639)
chr8 (147-231)||(583839-583923)
chr8 (148-231)||(4479296-4479379)
chr8 (147-237)||(44893277-44893367)
chr8 (147-231)||(45521195-45521279)
chr8 (147-230)||(14666070-14666153)
chr8 (147-234)||(23895592-23895679)
chr8 (146-236)||(18374032-18374122)
chr8 (162-231)||(6042848-6042917)
chr8 (147-216)||(8803096-8803165)
chr8 (147-231)||(10927633-10927717)
chr8 (147-230)||(8141130-8141213)
chr8 (147-236)||(2467117-2467206)
chr8 (147-236)||(24837264-24837353)
chr8 (197-237)||(33935784-33935824)
chr8 (147-231)||(43027332-43027416)
[»] chr6 (23 HSPs)
chr6 (147-231)||(9633624-9633708)
chr6 (147-230)||(12635842-12635925)
chr6 (147-231)||(30788852-30788936)
chr6 (152-233)||(2271307-2271388)
chr6 (147-236)||(3601106-3601195)
chr6 (147-236)||(5253222-5253311)
chr6 (147-237)||(13468954-13469044)
chr6 (147-236)||(6606096-6606185)
chr6 (147-236)||(8932683-8932772)
chr6 (147-236)||(8944149-8944238)
chr6 (175-236)||(12606452-12606513)
chr6 (147-236)||(13036003-13036092)
chr6 (147-236)||(19089520-19089609)
chr6 (147-231)||(8611973-8612057)
chr6 (147-231)||(21898675-21898759)
chr6 (179-237)||(9366454-9366512)
chr6 (147-236)||(5029839-5029928)
chr6 (184-237)||(29444801-29444854)
chr6 (147-231)||(8938738-8938822)
chr6 (147-231)||(14107357-14107441)
chr6 (147-222)||(14783419-14783494)
chr6 (177-231)||(13391313-13391367)
chr6 (147-231)||(10311468-10311552)
[»] chr7 (31 HSPs)
chr7 (150-236)||(14535312-14535398)
chr7 (147-236)||(38578866-38578955)
chr7 (146-222)||(3353459-3353535)
chr7 (147-231)||(22993366-22993450)
chr7 (147-231)||(34659252-34659336)
chr7 (147-231)||(48804709-48804793)
chr7 (147-236)||(17748381-17748470)
chr7 (147-236)||(10047875-10047964)
chr7 (147-236)||(13095879-13095968)
chr7 (147-228)||(21190779-21190860)
chr7 (146-227)||(41945503-41945584)
chr7 (147-231)||(5069814-5069898)
chr7 (147-231)||(8734685-8734769)
chr7 (147-230)||(42210261-42210344)
chr7 (147-237)||(48551877-48551967)
chr7 (147-237)||(49142668-49142758)
chr7 (147-236)||(1605962-1606051)
chr7 (147-236)||(22973988-22974077)
chr7 (147-236)||(23658200-23658289)
chr7 (147-236)||(27028300-27028389)
chr7 (147-236)||(32823264-32823353)
chr7 (147-236)||(47341897-47341986)
chr7 (147-231)||(4195201-4195285)
chr7 (147-231)||(16802149-16802233)
chr7 (184-236)||(30827313-30827365)
chr7 (147-231)||(39420863-39420947)
chr7 (164-231)||(4228770-4228837)
chr7 (152-230)||(45960007-45960085)
chr7 (147-236)||(36619253-36619342)
chr7 (197-237)||(18785689-18785729)
chr7 (184-236)||(43862008-43862060)
[»] chr4 (42 HSPs)
chr4 (147-236)||(38166050-38166139)
chr4 (147-231)||(7246645-7246729)
chr4 (147-236)||(3159468-3159557)
chr4 (147-236)||(47078481-47078570)
chr4 (147-231)||(2559335-2559419)
chr4 (147-230)||(5472847-5472930)
chr4 (147-236)||(20128332-20128421)
chr4 (147-236)||(29895810-29895899)
chr4 (147-231)||(17080071-17080155)
chr4 (147-231)||(36262766-36262850)
chr4 (147-231)||(48015072-48015156)
chr4 (147-231)||(49260664-49260748)
chr4 (147-230)||(24166479-24166562)
chr4 (148-231)||(40780861-40780944)
chr4 (146-236)||(14124039-14124129)
chr4 (146-236)||(43468370-43468460)
chr4 (146-227)||(43458645-43458726)
chr4 (147-223)||(33109360-33109436)
chr4 (147-235)||(50485967-50486055)
chr4 (175-236)||(3574473-3574534)
chr4 (147-236)||(16450323-16450412)
chr4 (147-232)||(16645145-16645230)
chr4 (146-231)||(30317261-30317346)
chr4 (146-231)||(42722575-42722660)
chr4 (150-236)||(1940779-1940862)
chr4 (175-231)||(20532436-20532492)
chr4 (147-227)||(47682381-47682461)
chr4 (147-230)||(49952144-49952228)
chr4 (173-236)||(1446849-1446912)
chr4 (147-230)||(10541045-10541127)
chr4 (147-222)||(14567276-14567351)
chr4 (145-228)||(15829730-15829813)
chr4 (197-236)||(20354660-20354699)
chr4 (152-231)||(48317279-48317358)
chr4 (149-231)||(295534-295616)
chr4 (197-231)||(40272380-40272414)
chr4 (147-236)||(20421796-20421885)
chr4 (197-230)||(38075462-38075495)
chr4 (174-231)||(41339421-41339478)
chr4 (147-236)||(55921057-55921146)
chr4 (147-231)||(4738646-4738730)
chr4 (149-237)||(21429323-21429411)
[»] scaffold0010 (2 HSPs)
scaffold0010 (147-236)||(155710-155799)
scaffold0010 (148-237)||(25784-25873)
[»] chr5 (34 HSPs)
chr5 (148-236)||(42291505-42291593)
chr5 (147-236)||(1538450-1538539)
chr5 (147-236)||(9805023-9805112)
chr5 (147-236)||(25417182-25417271)
chr5 (147-236)||(42086346-42086435)
chr5 (147-231)||(7866605-7866689)
chr5 (147-231)||(9812896-9812980)
chr5 (147-231)||(38897718-38897802)
chr5 (147-229)||(14728109-14728191)
chr5 (147-236)||(4016254-4016343)
chr5 (147-236)||(20682616-20682705)
chr5 (147-236)||(39099778-39099867)
chr5 (147-231)||(12705038-12705122)
chr5 (147-231)||(12766155-12766239)
chr5 (147-231)||(38369723-38369807)
chr5 (147-230)||(8513544-8513627)
chr5 (148-231)||(20525862-20525945)
chr5 (148-231)||(37263264-37263347)
chr5 (147-230)||(42861217-42861300)
chr5 (147-236)||(18262617-18262706)
chr5 (147-236)||(19572743-19572832)
chr5 (147-236)||(23383676-23383765)
chr5 (146-231)||(24463884-24463969)
chr5 (147-236)||(43399147-43399236)
chr5 (197-236)||(40117434-40117473)
chr5 (175-233)||(3653941-3653999)
chr5 (154-236)||(7308370-7308452)
chr5 (159-237)||(24875363-24875441)
chr5 (147-236)||(11845800-11845889)
chr5 (175-236)||(12081927-12081988)
chr5 (147-236)||(24653811-24653899)
chr5 (199-231)||(5731971-5732003)
chr5 (175-231)||(9168280-9168336)
chr5 (184-236)||(30995140-30995192)
[»] chr3 (43 HSPs)
chr3 (147-231)||(15320209-15320293)
chr3 (148-236)||(51682955-51683043)
chr3 (148-231)||(3507534-3507617)
chr3 (147-230)||(28572211-28572294)
chr3 (147-230)||(47219168-47219251)
chr3 (152-230)||(50405608-50405686)
chr3 (147-236)||(26043830-26043919)
chr3 (147-236)||(29127937-29128026)
chr3 (145-230)||(45877478-45877563)
chr3 (147-231)||(15795494-15795578)
chr3 (147-230)||(43330732-43330815)
chr3 (146-236)||(30767246-30767336)
chr3 (156-237)||(49198368-49198449)
chr3 (146-231)||(54261249-54261334)
chr3 (184-236)||(6462430-6462482)
chr3 (147-231)||(26361967-26362051)
chr3 (147-231)||(47749105-47749189)
chr3 (147-230)||(25294984-25295067)
chr3 (147-230)||(29762155-29762238)
chr3 (147-218)||(49021203-49021274)
chr3 (149-230)||(4638178-4638259)
chr3 (147-236)||(7328862-7328950)
chr3 (147-236)||(7650245-7650334)
chr3 (147-236)||(13893944-13894033)
chr3 (147-236)||(29135931-29136020)
chr3 (147-236)||(35315974-35316063)
chr3 (147-236)||(51060281-51060370)
chr3 (147-236)||(54237466-54237555)
chr3 (175-231)||(8164576-8164632)
chr3 (151-231)||(10040579-10040659)
chr3 (147-231)||(55069679-55069763)
chr3 (176-231)||(39849094-39849149)
chr3 (148-230)||(2029268-2029350)
chr3 (147-237)||(30045838-30045928)
chr3 (175-236)||(7648758-7648819)
chr3 (147-231)||(3136694-3136778)
chr3 (196-236)||(10855402-10855442)
chr3 (147-231)||(19146984-19147068)
chr3 (147-203)||(36043674-36043730)
chr3 (175-231)||(41630540-41630596)
chr3 (197-237)||(48342037-48342077)
chr3 (209-237)||(50682494-50682522)
chr3 (148-236)||(53649745-53649833)
[»] scaffold0170 (1 HSPs)
scaffold0170 (157-236)||(9866-9945)
[»] scaffold0009 (1 HSPs)
scaffold0009 (146-237)||(42830-42921)
[»] scaffold0291 (1 HSPs)
scaffold0291 (147-236)||(6876-6965)
[»] scaffold0086 (1 HSPs)
scaffold0086 (147-236)||(26204-26293)
[»] scaffold0209 (1 HSPs)
scaffold0209 (147-231)||(12599-12683)
[»] scaffold0024 (1 HSPs)
scaffold0024 (147-236)||(149406-149495)
[»] scaffold0016 (1 HSPs)
scaffold0016 (147-236)||(8700-8789)
[»] scaffold0006 (1 HSPs)
scaffold0006 (150-236)||(68538-68621)
[»] scaffold0004 (1 HSPs)
scaffold0004 (147-223)||(7834-7910)
[»] scaffold0005 (1 HSPs)
scaffold0005 (147-222)||(250024-250099)
[»] scaffold0002 (1 HSPs)
scaffold0002 (147-237)||(319442-319532)
[»] scaffold0316 (1 HSPs)
scaffold0316 (147-236)||(1613-1702)
[»] scaffold0029 (1 HSPs)
scaffold0029 (147-231)||(41070-41154)
[»] scaffold0001 (1 HSPs)
scaffold0001 (147-231)||(65151-65235)


Alignment Details
Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 45536842 - 45536770
Alignment:
Q  135 tatattaaaaaactttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggc 207  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  45536842 tatattaaaaaactttcgcaccggtttccgacccatcattggtgggcgactaatccggcaagtgcgtagaggc 45536770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 33004015 - 33004098
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||||||||  |||||| |||||||||| | ||||||||||  |||||||||||| |||||||||||||||| |||||    
T  33004015 ctttcgcaccggttttcgacccaccattggtgggtgactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtt 33004098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 8764099 - 8764010
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| ||  ||||| || ||||||||||  |||||||||||| ||||||||||||||| ||||||| ||||    
T  8764099 ctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccct 8764010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 43959821 - 43959910
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| || |||  |  |||||||| ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||    
T  43959821 ctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccct 43959910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 50503361 - 50503450
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||| ||||||| |||||| |||||||||||| | ||||||||  |||||||||||| |||||||||| |||| ||||||| ||||    
T  50503361 ctttcgcatcggtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccct 50503450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 37339928 - 37339846
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgt 229  Q
    ||||||||||||||||  ||||| ||  |||||||| ||||||||||  |||||| ||||| |||||||||||||||||||||    
T  37339928 ctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgt 37339846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 10172971 - 10173056
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttct 232  Q
    |||||||||||||||| |||||| ||  ||||||||  |||||||||   ||||||||||| || |||||||||||||||||||||    
T  10172971 ctttcgcaccggtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgttgttct 10173056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 17642004 - 17642093
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||| ||||| |||||| ||  ||||| || ||||||||||  |||||||||||| ||||||||||||||| ||||||| ||||    
T  17642004 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccct 17642093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 18915975 - 18915886
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||||||||  ||||| || ||||| ||| ||||||||||  |||||||||||| ||| ||||||||||| ||||||| ||||    
T  18915975 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccct 18915886  T

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Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 26325920 - 26325836
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| |||||| || |||||| || ||||||||||   ||||||||||| ||||||||| ||||| |||||||    
T  26325920 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttc 26325836  T

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Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 45542344 - 45542275
Alignment:
Q  18 tattctggtgtattaagggaagnnnnnnnnnntcttgtgtgcatatctacatgctaaactttgttggata 87  Q
    ||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  45542344 tattctggtgtattaagggaagaaaaaaaaaatcttgtgtgcatatctacatgctaaactttgttggata 45542275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 16263654 - 16263569
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||||| || ||||||   |||| || ||| ||||||   ||||||||||| |||||||||||||||||||||||    
T  16263654 actttcgcaccggtttccgatccatcaaaagtggacgactattccggcttatgcgtagaggcatgcgcactggccaagcgttgttc 16263569  T

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Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 21849204 - 21849289
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||| ||||||||  |||||| || | ||| ||| ||||||||||  |||||||||||| |||||||| ||||||||||||||    
T  21849204 actttcgtaccggttttcgacccaccaatagtgagcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttc 21849289  T

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Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 41663856 - 41663945
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| || |||||| || ||||||| ||   ||||||||||| ||||||||| ||||| ||||||| ||||    
T  41663856 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccct 41663945  T

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Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 50371834 - 50371919
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttct 232  Q
    |||||||||||||||| || ||| ||  | |||||| ||||||||||  ||||||||| || |||| |||||||||||||||||||    
T  50371834 ctttcgcaccggtttccgatccaccaaagatgggcgactaatccggcttgtgcgtagaagcatgcgtactggccaagcgttgttct 50371919  T

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Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 4581682 - 4581758
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaag 223  Q
    |||||||||||||||| |||||| ||  ||||| || ||| ||||||  |||||||||||| |||||||||||||||    
T  4581682 ctttcgcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactggccaag 4581758  T

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Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 49078222 - 49078139
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||||||||| |||| | || |||||  || ||||||||||   ||||||||||| ||||||||||||||| ||||||    
T  49078222 ctttcgcaccggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt 49078139  T

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Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 6899666 - 6899597
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcact 216  Q
    |||||||||||||||| || ||||||  |||||||| ||||||||||  ||||||| |||| ||||||||    
T  6899666 ctttcgcaccggtttccgatccatcaaaggtgggcgactaatccggcttgtgcgtaaaggcatgcgcact 6899597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 32142846 - 32142935
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||| ||||||| |||||||||  |||| ||| ||||| ||||   |||||| |||| ||||||||||||||| ||||||| ||||    
T  32142846 ctttcgcatcggtttccgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactggccaagtgttgttccccct 32142935  T

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Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 2567384 - 2567296
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccc 235  Q
    |||||| ||||||||| |||||| ||  | ||| ||||||||| | |  ||| |||||||| |||||||||||||||||||||| ||||    
T  2567384 ctttcgtaccggtttccgacccaccaaagatggacggctaatctgactcgtgagtagaggcatgcgcactggccaagcgttgttttccc 2567296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 10422896 - 10422812
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| |||  | ||  ||||| || ||||||||||   ||||||||||| ||||||||||||||| |||||||    
T  10422896 ctttcgcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttc 10422812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 30927727 - 30927811
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||| |||||||||||||||||| ||   |||| || ||||||||||   ||||||||||| ||| || ||||||||||||||||    
T  30927727 cttttgcaccggtttctgacccaccaaaagtggacgactaatccggctcatgcgtagaggcatgcacattggccaagcgttgttc 30927811  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 45361882 - 45361966
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| ||||||  |  ||||  || ||||||||||   ||||||| ||| |||||||||||||||||||||||    
T  45361882 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcactggccaagcgttgttc 45361966  T

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Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 14254278 - 14254357
Alignment:
Q  157 ggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||| |||||||||  ||||| || ||||||||||   |||||| |||| |||| |||||||||||||||||| ||||    
T  14254278 ggtttccgacccatcaaaggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttccccct 14254357  T

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Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 14357863 - 14357780
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||||||||| ||||||||| ||||   ||  ||||||||   |||||||||||| |||||||||| ||| |||||||    
T  14357863 ctttcgcaccggtttccgacccatcaatggtaaacgattaatccggttcgtgcgtagaggcatgcgcactggtcaaacgttgtt 14357780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 16956574 - 16956491
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    ||||||||| |||||| |||||| ||  |||| | | ||||||||||  |||||||||||| |||||||||| ||| |||||||    
T  16956574 ctttcgcactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgtt 16956491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 44969772 - 44969685
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcc 234  Q
    ||||| |||||||||| || ||| || || ||| || ||||||||||   ||||||| ||| ||| ||||||||||||||||||||||    
T  44969772 ctttcacaccggtttccgatccaccaatgatggacgactaatccggctcatgcgtaggggcatgcacactggccaagcgttgttctcc 44969685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 5504140 - 5504050
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||| ||||||||| |||||||||  ||||| || ||||||||||   ||||||||||| || |||||   ||||||||||| |||||    
T  5504140 actttcgtaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactaatcaagcgttgttttccct 5504050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 5855580 - 5855546
Alignment:
Q  197 tgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||| |||||||||||||||||||||||    
T  5855580 tgcgtagaggcatgcgcactggccaagcgttgttc 5855546  T

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Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 33418143 - 33418197
Alignment:
Q  175 ggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgt 229  Q
    ||||| || ||||||||||  |||| ||||||| |||||||||||||||||||||    
T  33418143 ggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgt 33418197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 34697443 - 34697353
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    |||||||| |||||||  ||||||||   ||||||| ||||||||||   ||||||||||| ||| |||| |||||| ||||||| |||||    
T  34697443 ctttcgcatcggtttccaacccatcaaaagtgggcgactaatccggctcatgcgtagaggcatgcacactagccaagtgttgttcccccta 34697353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 12036793 - 12036834
Alignment:
Q  196 gtgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    |||||||||||| |||||||||||||||| |||||| |||||    
T  12036793 gtgcgtagaggcatgcgcactggccaagcattgttcccccta 12036834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 33498867 - 33498920
Alignment:
Q  175 ggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttg 228  Q
    ||||| || ||||||||||   ||||||||||| ||||||||||||||||||||    
T  33498867 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttg 33498920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 230
Target Start/End: Original strand, 17092480 - 17092560
Alignment:
Q  150 tcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||||||||| | | ||  ||||| || ||||||||||  |||||||||||| | | |||||||||| |||||||    
T  17092480 tcgcaccggtttctgatctaccaaaggtggacgactaatccggctcgtgcgtagaggcatacacactggccaatcgttgtt 17092560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 34719884 - 34719804
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgtt 227  Q
    |||||||||| ||||| |||||| ||  |||| ||| |||||| | |  |||||||||||| |||||||||| ||||||||    
T  34719884 ctttcgcaccagtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcactggtcaagcgtt 34719804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 44139591 - 44139502
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||||  ||||||||||||  |||||||||||||||||||||| ||||    
T  44139591 ctttcgcaccggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccct 44139502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 27726047 - 27725963
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||| |||||||||| |||||| |||||||||||| |||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  27726047 ctttcacaccggtttccgacccaccattggtgggcgactaatccggctagtgcgtagaggcatgcgcactggccaagcattgttc 27725963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 25540403 - 25540493
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    |||||||||||||||| |||||| ||  ||||| || ||||||||||  |||||||||||| ||||||||||||||||||||||| |||||    
T  25540403 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccccta 25540493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 34722787 - 34722698
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||||||||||| ||||||  |||||||| ||||||||||  |||||||||| | || |||||| ||||||||||||||||||    
T  34722787 ctttcgcaccggtttctgatccatcaaaggtgggcgactaatccggctcgtgcgtagagacatgtgcactgaccaagcgttgttctccct 34722698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 10823167 - 10823083
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| ||||||  |  |||||||| ||||||||||  |||||||||||| |||||||||||||||||||||||    
T  10823167 ctttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 10823083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 12455417 - 12455334
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||||||||| |||||| || ||||| ||| ||||||||||  |||||||||||| ||||||||||| ||||||||||    
T  12455417 ctttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtt 12455334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 20116611 - 20116695
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||   ||||||||||| |||||| |||||| |||||||||    
T  20116611 ctttcgcaccggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgcattggccatgcgttgttc 20116695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 8410238 - 8410149
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||  ||   ||||||| ||||||||||  |||||||||||| ||||||||||||||| ||||||| ||||    
T  8410238 ctttcgcaccggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccct 8410149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 35946845 - 35946761
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||| ||||| |||||| || |||||| || ||||||||||  |||||||||||| ||| || ||||||||||||||||    
T  35946845 ctttcgcaccagtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcatgcacaatggccaagcgttgttc 35946761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 38962870 - 38962786
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||| |||||||||||| ||  ||||| || |||||||||    ||||||||||| |||||||||||||||||||||||    
T  38962870 ctttcgcaccagtttctgacccaccaaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgttc 38962786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 43303292 - 43303375
Alignment:
Q  148 tttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||| ||||||||||||||||| ||||||  |||||| ||  |||| ||||||| |||| ||||| ||||||||||||    
T  43303292 tttcgcaccgatttctgacccatcattgatgggcgattaatccagctcgtgcatagaggcatgcgtactggtcaagcgttgttc 43303375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 6358150 - 6358239
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||| |||||||||  |||||| || |||||| || ||||||||||   ||||||||||| ||||||||||||||| ||||||| ||||    
T  6358150 ctttcacaccggttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccct 6358239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 16325702 - 16325613
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| || |||||| || |||||| |||   ||||||||||| ||| ||||||||||| ||||||| ||||    
T  16325702 ctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaagtgttgttccccct 16325613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 41031905 - 41031994
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||| |||||| |||||| ||  |||||| | ||||||||||  |||||||||||| ||| ||||||||||| ||||||| ||||    
T  41031905 ctttcgcactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccct 41031994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 16035044 - 16034960
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| ||| ||||| ||||| ||| ||||||||||  || |||| |||| ||| |||||| ||||||||||||    
T  16035044 ctttcgcaccggtttccgactcatcaatggtgagcgactaatccggctcgtacgtataggcatgcacactggtcaagcgttgttc 16034960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 18902529 - 18902613
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| |||||| ||  |||||||| |||||| |||  |||||||||| |  ||||||||| ||||||||||||    
T  18902529 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttc 18902613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 38005509 - 38005425
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||| ||||| || ||| ||  |||||||| ||||||||||   || |||||||| |||||||||||||||||||||||    
T  38005509 ctttcgcaccagtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttc 38005425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 44945700 - 44945616
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| || |||  |  |||||||| ||||||||||  |||||||||||| ||||||||  |||||||||||||    
T  44945700 ctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactatccaagcgttgttc 44945616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 9360747 - 9360830
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||||||||| | ||||  |  |||||||| ||||| ||||  |||||||||||| |||||||||||||| |||||||    
T  9360747 ctttcgcaccggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgttgtt 9360830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 12864332 - 12864242
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||||||||| |||||| || |||||| || |||||| |||   |||| |||||| ||||||||| ||||| ||||||| ||||    
T  12864332 actttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccct 12864242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 45263704 - 45263750
Alignment:
Q  185 taatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||  |||||||||||| |||||||||||||||||||||||    
T  45263704 taatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 45263750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 14169607 - 14169692
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||||| |||||| || |||| | || ||||||||||   ||||||||| | |||||||||| |||| |||||||    
T  14169607 actttcgcaccggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaagtgttgttc 14169692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 28616378 - 28616467
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||||||||||  |  | |||||| |||||| |||  |||||||||||| ||||||||| ||||| ||| ||| ||||    
T  28616378 ctttcgcaccggtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcactgcccaagtgttattccccct 28616467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 3643886 - 3643970
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||| ||||||| | |||| ||  ||||| || ||||||| ||   ||||||||||| |||||||||||||||||||||||    
T  3643886 ctttcgcaacggtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttc 3643970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 3811690 - 3811774
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||| |||||||||||||| ||  ||||||||  |||||||||   ||||||||||| |||||| || ||||| |||||||    
T  3811690 ctttcgcatcggtttctgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgcgcattgaccaagtgttgttc 3811774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 10669650 - 10669610
Alignment:
Q  196 gtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  10669650 gtgcgtagagacatgcgcactggccaagcgttgttctccct 10669610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 13104874 - 13104910
Alignment:
Q  197 tgcgtagaggcgtgcgcactggccaagcgttgttctc 233  Q
    ||||||||||| |||||||||||||||||||||||||    
T  13104874 tgcgtagaggcatgcgcactggccaagcgttgttctc 13104910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 20612534 - 20612618
Alignment:
Q  148 tttcgcaccggtttctgacccatcattggtgggcggctaat-ccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||| |||||| || |||||| || ||||| |||||   ||| ||||||| ||||||||||||||| |||||||    
T  20612534 tttcgcaccggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactggccaagtgttgttc 20612618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 37560280 - 37560196
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||| |||||||||  |||||||||  ||||| ||  |||||||||  |||||||||||| ||||||||| |||| ||||||||    
T  37560280 ctttcacaccggttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgttc 37560196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 41220742 - 41220658
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| ||||||  |  ||||  || ||||| ||||   ||||||||||| |||||||||||||||||||||||    
T  41220742 ctttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagcgttgttc 41220658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 28525454 - 28525537
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    ||||| |||| ||||| ||||||| |  |||||  | ||||||||||  |||||||||||| ||||||||||||||| ||||||    
T  28525454 ctttcacaccagtttccgacccattaaaggtggatgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtt 28525537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 42770688 - 42770739
Alignment:
Q  185 taatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||  ||||| |||||| ||||||||||||||||||||||| ||||    
T  42770688 taatccggctcgtgcgaagaggcatgcgcactggccaagcgttgttccccct 42770739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 190
Target Start/End: Complemental strand, 44193589 - 44193546
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatcc 190  Q
    ||||||||||||||||||||||| || ||||||||| |||||||    
T  44193589 ctttcgcaccggtttctgacccaccaatggtgggcgactaatcc 44193546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 10026626 - 10026704
Alignment:
Q  158 gtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||| |||||| ||  ||||| || ||||||||||   ||||||||||| |||||||||||||| |||||||| ||||    
T  10026626 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccct 10026704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 21180350 - 21180400
Alignment:
Q  184 ctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcc 234  Q
    ||||||||||  |||||||||||| || |||||||||||| ||||||||||    
T  21180350 ctaatccggctcgtgcgtagaggcatgtgcactggccaagtgttgttctcc 21180400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 331580 - 331519
Alignment:
Q  175 ggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||| ||||||||||   |||||||| || ||||||||||||||| ||||||| ||||    
T  331580 ggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccct 331519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 11069985 - 11069896
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||| ||||||| |||||| ||  ||||| || ||||| | ||  |||||||||||  |||||||||||||| |||||||| ||||    
T  11069985 ctttcgcatcggtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactggccaaacgttgttccccct 11069896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 22593240 - 22593153
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||| | |||||| ||  ||||| || ||||||||||   ||||||||||| |||||||||||||| |||||||| ||||    
T  22593240 ctttcgcaccggttcc-gacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa-cgttgttccccct 22593153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 29653702 - 29653645
Alignment:
Q  179 ggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||| ||||| ||||  |||||||||||| ||||||||| |||||||||||| |||||    
T  29653702 ggcgactaattcggctcgtgcgtagaggcatgcgcactgcccaagcgttgttttccct 29653645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 7747381 - 7747297
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| ||||||  |  ||||  || ||||||||||   ||||||||||| ||| |||||||||| ||||||||    
T  7747381 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttc 7747297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 21286552 - 21286468
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    ||||| |||||||||||  ||||| || || || | | ||||||| ||  |||||||||||| |||||||||| |||||||||||    
T  21286552 acttttgcaccggtttccaacccaccaatgatgagtgactaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgtt 21286468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 39806883 - 39806967
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||||||||| ||| ||| ||  |||||  | |||||||| |  ||| |||||||| |||||||||||||| |||||||    
T  39806883 actttcgcaccggtttatgaaccaccaaaggtggatgactaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtt 39806967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 12781 - 12696
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||||||||||||||  |||||||| |||||||||   |||||||||||| ||| |||||||||||||||||||    
T  12781 actttcgcaccggtttctgacccatcaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttc 12696  T

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Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 43033012 - 43032923
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||  ||| |||||||| ||||||||||||||||||||||| ||||    
T  43033012 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgttccccct 43032923  T

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Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 2964187 - 2964103
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||||||||||| ||  |||||||| |||||||||   |||||||||||| ||| || ||||||||||||||||    
T  2964187 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacattggccaagcgttgttc 2964103  T

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Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 15884556 - 15884639
Alignment:
Q  148 tttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||| |||||| ||  |||||||| ||||||||||  |||||||||||| |||||||| |||||| |||||||    
T  15884556 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgttgttc 15884639  T

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Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 583923 - 583839
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||||| | ||||||  |||||||| |||||||| |   ||||||||||| |||||||||| ||||||||||||    
T  583923 ctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgttc 583839  T

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Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 4479296 - 4479379
Alignment:
Q  148 tttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||| |||||| ||  ||||| || ||||||| ||   ||||||||||| |||||||||||||||||||||||    
T  4479296 tttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttc 4479379  T

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Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 44893277 - 44893367
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    |||| ||||||||||| |||||||||  |||| |||  |||||||||  |||||||||||| ||| |||||||||||| |||||| |||||    
T  44893277 cttttgcaccggtttccgacccatcaagggtgagcgattaatccggctcgtgcgtagaggcatgcacactggccaagcattgttcccccta 44893367  T

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Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 45521279 - 45521195
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| |||||||||  |||| ||| ||||||||||   ||||||||||| |||||||||  |||| |||||||    
T  45521279 ctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttgttc 45521195  T

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Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 14666070 - 14666153
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||||||||  |||||| ||   ||||||| |||||| |||  |||||||||||| ||||||||||||||| ||||||    
T  14666070 ctttcgcaccggttttcgacccaccaactgtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtt 14666153  T

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Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 23895679 - 23895592
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcc 234  Q
    |||||||||| ||||| |||||||||  ||||| ||  ||||||  |  |||||||||||  ||||||||||||||||||||||||||    
T  23895679 ctttcgcacccgtttccgacccatcaaaggtggacgattaatccatctcgtgcgtagaggtatgcgcactggccaagcgttgttctcc 23895592  T

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Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 18374122 - 18374032
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||| ||||||||||  |||||| ||  | ||| || ||||||||||   ||||||||||| |||||||||| |||||||||||||||||    
T  18374122 acttttgcaccggttttcgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccct 18374032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 6042917 - 6042848
Alignment:
Q  162 ctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||| || ||||||||| ||||||||||   |||||  |||| |||||||||||||||||||||||    
T  6042917 ctgacccaccagtggtgggcgactaatccggctcatgcgtttaggcatgcgcactggccaagcgttgttc 6042848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 8803165 - 8803096
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcact 216  Q
    |||||||| ||||||| |||||| ||||| |||||| ||||||||||  |||||||||||  ||||||||    
T  8803165 ctttcgcatcggtttccgacccaccattgatgggcgactaatccggctcgtgcgtagaggtctgcgcact 8803096  T

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Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 10927717 - 10927633
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||| ||||||| ||||||  |  ||||  || ||||||||||   ||||||||||| |||||||||||||||||||||||    
T  10927717 ctttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttc 10927633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 8141213 - 8141130
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||| |||||||||||||| ||   |||| || ||||| | ||   ||||||||||| ||||||||||||||||||||||    
T  8141213 ctttcgcatcggtttctgacccaccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtt 8141130  T

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Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 2467117 - 2467206
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| ||| || || | |||| || ||||||||||   ||| ||||| | ||||||||||||||| ||||||| ||||    
T  2467117 ctttcgcaccggtttccgacacaccaattgtggacgactaatccggctcatgcatagagacatgcgcactggccaagagttgttccccct 2467206  T

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Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 24837353 - 24837264
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||| ||||| || ||| ||  ||||| || ||||||| ||  |||| ||||||| ||  ||||||||||||||||||||||||    
T  24837353 ctttcgcaccagtttccgatccaccaaaggtggacgactaatcctgctcgtgcttagaggcatgaacactggccaagcgttgttctccct 24837264  T

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Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 33935784 - 33935824
Alignment:
Q  197 tgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    |||||| |||| ||||||||||||||| |||||||||||||    
T  33935784 tgcgtataggcatgcgcactggccaagtgttgttctcccta 33935824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 43027416 - 43027332
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||| ||||||| |||||||||  | ||| || ||||||||||   ||||||||||| |||||| ||| ||| ||||||||    
T  43027416 ctttcgcatcggtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgcattggacaatcgttgttc 43027332  T

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Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 9633624 - 9633708
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| |||||| ||  |||||||| ||||||||||  |||||||||||| |||||||||||||||||||||||    
T  9633624 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 9633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 12635925 - 12635842
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||||||||| |||||| || | ||||||| ||||||||||  |||||||||||| |||||||| |||||||||||||    
T  12635925 ctttcgcaccggtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcactagccaagcgttgtt 12635842  T

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Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 30788852 - 30788936
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| |||||| ||  |||||||| ||||||||||  |||| ||||||| |||||||||||||| ||||||||    
T  30788852 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgttc 30788936  T

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Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 2271307 - 2271388
Alignment:
Q  152 gcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctc 233  Q
    |||| ||||||||||||||||  ||||| || ||||||||||  |||||||||| | ||||||||||| |||||||||||||    
T  2271307 gcactggtttctgacccatcaaaggtggacgactaatccggctcgtgcgtagagacatgcgcactggctaagcgttgttctc 2271388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 3601195 - 3601106
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| ||  ||||| || ||||||||||  ||| ||| |||| ||||||||||||||||||||||| ||||    
T  3601195 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgttccccct 3601106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 5253222 - 5253311
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| ||  ||||||||  |||||||||   ||||||||||| ||||||||||||||| ||||||| ||||    
T  5253222 ctttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccct 5253311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 13469044 - 13468954
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    ||||||||||||||||  ||||| || ||||||||| |||||| |||  |||||||||||| || |||||| |||| |||||||| |||||    
T  13469044 ctttcgcaccggtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcatgtgcactgaccaatcgttgttcccccta 13468954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 6606096 - 6606185
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| || |||||| || ||||||||||   ||||||||||| ||  ||||||||||| ||||||| ||||    
T  6606096 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccct 6606185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 8932772 - 8932683
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||||||  |||||| |  |||||||||   ||||||||||| |||||||| |||||| ||||||| ||||    
T  8932772 ctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccct 8932683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 8944238 - 8944149
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||||||  |||||| |  |||||||||   ||||||||||| |||||||| |||||| ||||||| ||||    
T  8944238 ctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccct 8944149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 12606513 - 12606452
Alignment:
Q  175 ggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||| ||||||||||  |||||||||||| |||||||||||||| |||||||| ||||    
T  12606513 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccccct 12606452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 13036003 - 13036092
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| || | |||| || |||||| |||   ||||||||||| ||||||||||||||| ||||||| ||||    
T  13036003 ctttcgcaccggtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccct 13036092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 19089609 - 19089520
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| ||  ||| | || ||||||||||  |||||||||||| ||| ||||||||||| ||||||| ||||    
T  19089609 ctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccccct 19089520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 8611973 - 8612057
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||||||||||| ||  |||||||| |||||||||    |||||||| || ||| |||||| ||||||||||||    
T  8611973 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttc 8612057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 21898759 - 21898675
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| ||||||  |  ||||  || ||||||||||   ||||||||||| |||||||||||||||||||||||    
T  21898759 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttc 21898675  T

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Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 9366454 - 9366512
Alignment:
Q  179 ggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    |||| ||||||||||  |||||||||||| ||||||||||||||||||| ||| |||||    
T  9366454 ggcgtctaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattcccccta 9366512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 5029928 - 5029839
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||| ||||| |||||||||  | |||||| |||||||  |   ||||||||||| ||||||||| |||| |||||||||||||    
T  5029928 ctttcgcaccagtttccgacccatcaaagatgggcgactaatccaactcatgcgtagaggcatgcgcactgaccaaacgttgttctccct 5029839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 29444801 - 29444854
Alignment:
Q  184 ctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    ||||||||||   ||||||||||| ||||||||||||||||||||||| |||||    
T  29444801 ctaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccccta 29444854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 8938822 - 8938738
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| |||||||||  ||||| || ||||| ||||   |||||||| || |||||||||| |||| |||||||    
T  8938822 ctttcgcaccggtttccgacccatcaaaggtggacgactaattcggctcatgcgtagatgcttgcgcactggtcaagtgttgttc 8938738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 14107357 - 14107441
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| ||||||  | |  |||||| ||||||||||   ||||||||||| || ||||||| ||||||||||||    
T  14107357 ctttcgcaccggtttccgacccactaataatgggcgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttc 14107441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 14783419 - 14783494
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaa 222  Q
    |||||||||||||||| |||||| || |||||| || ||||||||||   ||||||||||| ||| |||| |||||    
T  14783419 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactagccaa 14783494  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 13391367 - 13391313
Alignment:
Q  177 tgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||| ||||||||||  |||||||||||| |||||||||||||| | ||||||    
T  13391367 tgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacattgttc 13391313  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 10311468 - 10311552
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||| ||||  |||||| || ||||| ||| ||||||   |  |||||||||| | |||||||||||||||||||||||    
T  10311468 ctttcgcaccagttttcgacccaccaatggtgagcgactaatctaactcgtgcgtagagacatgcgcactggccaagcgttgttc 10311552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 14535398 - 14535312
Alignment:
Q  150 tcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||| ||||||||||||||| ||||||||| ||||||| ||  |||||||||||| ||| ||||||||||| ||||||||||||    
T  14535398 tcgcaccagtttctgacccatcaatggtgggcgactaatccagctcgtgcgtagaggcatgcacactggccaagtgttgttctccct 14535312  T

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Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 38578866 - 38578955
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| ||  |||||||| ||||||||||   ||||||||||| ||||||||||||||||||||||| ||||    
T  38578866 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccct 38578955  T

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Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 3353535 - 3353459
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaa 222  Q
    |||||||||||||||||||| ||||||  ||||| || ||||||||||  |||||||||||| ||||||||||||||    
T  3353535 actttcgcaccggtttctgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaa 3353459  T

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Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 22993366 - 22993450
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||||||||||| ||  |||| ||| |||||||||   |||||||||||| ||| |||||||||||||||||||    
T  22993366 ctttcgcaccggtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttc 22993450  T

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Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 34659336 - 34659252
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||  ||| || || ||||||||| ||||||||||  |||||||||||| |||||||||| ||||||||||||    
T  34659336 ctttcgcaccggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttc 34659252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 48804793 - 48804709
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| |||||| || |||||| || ||||||||||   ||||||||||| ||||||||||||||| |||||||    
T  48804793 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttc 48804709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 17748381 - 17748470
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||| ||||||| |||||| ||  ||||| || ||||||||||  || ||||||||| ||||||||||||||||||||||| ||||    
T  17748381 ctttcgcatcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccct 17748470  T

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Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 10047875 - 10047964
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| || |||||| || ||||| | ||   ||||||||||| ||||||||||||||| ||||||| ||||    
T  10047875 ctttcgcaccggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaagtgttgttccccct 10047964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 13095968 - 13095879
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||| ||||||||||| |||||| ||  |||| ||| ||||||||||   ||||||||||| ||||||||||||||| ||||||| ||||    
T  13095968 cttttgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccct 13095879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 21190779 - 21190860
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttg 228  Q
    |||||||||||||||  |||||| ||||| |||||| |||||| | |  |||||||||||| |||||||| |||||||||||    
T  21190779 ctttcgcaccggttttcgacccaccattgatgggcgactaatctgactcgtgcgtagaggcatgcgcactagccaagcgttg 21190860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 41945584 - 41945503
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgtt 227  Q
    |||||||||||| |||| ||| || ||  ||||| || ||||||||||  |||||||||||| |||||||||||||||||||    
T  41945584 actttcgcaccgatttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgtt 41945503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 5069814 - 5069898
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||| ||||||| |||||| ||  |||||||| ||||||||||  |||||||||||| ||| |||| || |||||||||||    
T  5069814 ctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgcacactagctaagcgttgttc 5069898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 8734685 - 8734769
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| |||||| ||  |||||||| |||||| |||  |||||| ||||| ||||||||| |||||| ||||||    
T  8734685 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaagcattgttc 8734769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 42210261 - 42210344
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||| ||||||| |||||| ||  |||||| |  |||||||||  |||||||||||| |||||||||||||| |||||||    
T  42210261 ctttcgcatcggtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgtt 42210344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 48551967 - 48551877
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    |||||||||||||||| || ||||||  ||||| || ||||||||||   | ||||||||| |||||| ||||||| |||||||| |||||    
T  48551967 ctttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcatacgtagaggcatgcgcattggccaaccgttgttcacccta 48551877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 49142668 - 49142758
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    ||||||||||  |||  |||||||||  |||||||  ||||||||||  |||||||||||| || |||||||| ||||||||||| |||||    
T  49142668 ctttcgcaccaattttcgacccatcaaaggtgggcaactaatccggctcgtgcgtagaggcatgtgcactggctaagcgttgttcccccta 49142758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 1606051 - 1605962
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| || ||| ||  |||||||| ||||||||||    || ||||||| || |||||||||||||||||||| ||||    
T  1606051 ctttcgcaccggtttccgatccaccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccct 1605962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 22974077 - 22973988
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||| ||||||||||||||| ||  ||||| || |||||| |||   |||||||| || ||| ||||||||||||||||||| ||||    
T  22974077 ctttcgcgccggtttctgacccaccaaaggtggacgactaatctggctcatgcgtagacgcatgcacactggccaagcgttgttccccct 22973988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 23658289 - 23658200
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||| |||| ||||||||||||| ||  | ||| || ||||||||||  ||| |||||||| ||| ||||||||||||||||||| ||||    
T  23658289 cttttgcacaggtttctgacccaccaaagatggacgactaatccggctcgtgtgtagaggcatgcacactggccaagcgttgttccccct 23658200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 27028389 - 27028300
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| ||  |||| ||| ||||||| ||   || |||||||| ||||||||||||||| ||||||| ||||    
T  27028389 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactggccaagtgttgttccccct 27028300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 32823353 - 32823264
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||| ||||| ||||||||| ||||  ||| ||||||||||  |||||||||||| | | ||| ||||||| ||||||| ||||    
T  32823353 ctttcgcacccgtttccgacccatcaatggtctgcgactaatccggctcgtgcgtagaggcatacacaccggccaagtgttgttccccct 32823264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 47341986 - 47341897
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||| |||| |||||| || |||||  || | ||||| ||  |||||||||||| ||||||||||||||| ||||||| ||||    
T  47341986 ctttcgcaccgatttccgacccaccaatggtgaacgaccaatcctgctcgtgcgtagaggcatgcgcactggccaagtgttgttccccct 47341897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 4195201 - 4195285
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||| |||||||  ||||| || |||||| |||||||||||||   ||||||||||| |||||||| |||||  |||||||    
T  4195201 ctttcgcatcggtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttc 4195285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 16802233 - 16802149
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||| ||||| ||||  |||||| || ||||| ||| ||||||||||  |||||||||||| | |||||||||||| ||||||||    
T  16802233 cttttgcaccagttttcgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatacgcactggccaatcgttgttc 16802149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 30827365 - 30827313
Alignment:
Q  184 ctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||  |||||||||||| |||| |||||||||| ||||||||||||    
T  30827365 ctaatccggctcgtgcgtagaggcatgcgtactggccaagtgttgttctccct 30827313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 39420947 - 39420863
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||| ||||||||||| | |||||||  ||| | || ||||||||||   |||||||||||  ||||||||||||||||||||||    
T  39420947 cttttgcaccggtttccggcccatcaaaggtagacgactaatccggctcatgcgtagaggcacgcgcactggccaagcgttgttc 39420863  T

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Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 4228770 - 4228837
Alignment:
Q  164 gacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||| ||||||||| ||||||||||   ||||||| ||| || ||||||||||| ||||||||    
T  4228770 gacccatcaatggtgggcgactaatccggctcatgcgtaggggcatgtgcactggccaaacgttgttc 4228837  T

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Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 45960007 - 45960085
Alignment:
Q  152 gcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    ||||||||||| || ||||||  |||| ||| ||||||||||   ||||||||||| ||||||||| ||||| ||||||    
T  45960007 gcaccggtttccgatccatcaaaggtgagcgactaatccggcttatgcgtagaggcatgcgcactgaccaagtgttgtt 45960085  T

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Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 36619253 - 36619342
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||| ||| ||||| ||||||| || |||||| || ||||||||||   ||||||||||| ||| |||||| |||| ||||||| ||||    
T  36619253 ctttcacactggtttttgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactggacaagtgttgttccccct 36619342  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 18785729 - 18785689
Alignment:
Q  197 tgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    ||||||||||| ||||||||||||||| ||||||| |||||    
T  18785729 tgcgtagaggcatgcgcactggccaagtgttgttcccccta 18785689  T

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Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 43862008 - 43862060
Alignment:
Q  184 ctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||   ||||||||||| |||||||||||||| |||||||| ||||    
T  43862008 ctaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccct 43862060  T

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Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 38166139 - 38166050
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| ||  |||||||| ||||||||||  |||||||||| | ||||||||||||||||||||||| ||||    
T  38166139 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccct 38166050  T

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Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 7246645 - 7246729
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| |||||| ||  |||||||| ||||||||||   ||||||||||| |||||||||||||||||||||||    
T  7246645 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttc 7246729  T

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Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 3159468 - 3159557
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||| ||||||||||| |||||| || ||||| ||| |||||| |||  |||||||||||| ||||||||||||||||||||||| ||||    
T  3159468 cttttgcaccggtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccct 3159557  T

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Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 47078570 - 47078481
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||| |||||| |||||| || ||||| ||| ||||||||||  |||||||||||| || |||||||||||||||||||| ||||    
T  47078570 ctttcgcactggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccct 47078481  T

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Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 2559419 - 2559335
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| |||||| ||  ||||| ||  |||||||||  |||||||||||| |||||||||||||||||||||||    
T  2559419 ctttcgcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgttc 2559335  T

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Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 5472847 - 5472930
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||| ||||  |||||| ||  |||||||| ||||||||||  |||||||||||| ||||||||||||||||||||||    
T  5472847 ctttcgcaccagttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtt 5472930  T

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Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 20128421 - 20128332
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||||||||||||||| || |||||| || ||||||  ||  ||||||| |||| |||||||||||||||| |||||| ||||    
T  20128421 ctttcgcaccggtttctgacccaccaatggtggacgactaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccct 20128332  T

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Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 29895899 - 29895810
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| || ||| || |||||| || ||||||||||   ||||||||||| ||||||||||||||| ||||||| ||||    
T  29895899 ctttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccct 29895810  T

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Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 17080155 - 17080071
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||  || ||||||  |||| ||| ||||||||||   ||||||||||| |||||||||||||||||||||||    
T  17080155 ctttcgcaccggttttcgatccatcaaaggtgtgcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttc 17080071  T

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Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 36262766 - 36262850
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||  ||||||||||||| ||  |||||||| |||||||| |  |||||||||||| || ||||||||||||||||||||    
T  36262766 ctttcgcattggtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgttgttc 36262850  T

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Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 48015072 - 48015156
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| || ||||||    |||||  ||||||||||  |||||||||||| |||||||||||||||||||||||    
T  48015072 ctttcgcaccggtttccgatccatcaaaattgggctactaatccggctcgtgcgtagaggcttgcgcactggccaagcgttgttc 48015156  T

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Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 49260664 - 49260748
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||| |||||| |||| |||||| ||  ||||| || ||||||||||  |||||||||||| |||||||||||||||||||||||    
T  49260664 cttttgcaccgatttccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 49260748  T

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Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 24166562 - 24166479
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||||||||| || ||||||  |||||| | |||||| |||  |||||||||||| |||||||||||||| |||||||    
T  24166562 ctttcgcaccggtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtt 24166479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 40780861 - 40780944
Alignment:
Q  148 tttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||| |||||| ||  ||||| || ||||||||||   ||||||||||| ||||||||| |||||||||||||    
T  40780861 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgttc 40780944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 14124129 - 14124039
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||||  ||||| || ||||| ||| ||||||||||  ||| |||||||| ||||||||||||||  ||||||| ||||    
T  14124129 actttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactggccaaatgttgttccccct 14124039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 43468460 - 43468370
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||| || |||||| || ||||||||| ||||||||||   |||||||||   || |||||||||||||||||||| ||||    
T  43468460 actttcgcaccggtctccgacccaccactggtgggcgactaatccggctcatgcgtagagaaatgtgcactggccaagcgttgttccccct 43468370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 43458726 - 43458645
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgtt 227  Q
    ||||||||| ||||||| ||| |||||  ||||| || ||||||||||  || ||||||||| |||||||||||||||||||    
T  43458726 actttcgcaacggtttccgactcatcaaaggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaagcgtt 43458645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 33109436 - 33109360
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaag 223  Q
    ||||||| ||||||||||| ||||||||| |||||  ||||||||||  |||||||||| | |||| ||||||||||    
T  33109436 ctttcgcgccggtttctgatccatcattgatgggcaactaatccggctcgtgcgtagagacatgcgtactggccaag 33109360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 50486055 - 50485967
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccc 235  Q
    |||| ||| ||||||| ||||||  | ||||||||| ||||||||||  |||||||||||| ||||  |||||||| ||||||||||||    
T  50486055 cttttgcatcggtttccgacccactaatggtgggcgactaatccggctcgtgcgtagaggcatgcgttctggccaatcgttgttctccc 50485967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 3574473 - 3574534
Alignment:
Q  175 ggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||| ||| |||||||| |  |||||||||||| ||||||||||||||| ||||||||||||    
T  3574473 ggtgagcgactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccct 3574534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 16450412 - 16450323
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||| | ||  ||||| || |||||| |||   ||||||||||| || |||||||||||||||||||| ||||    
T  16450412 ctttcgcaccggtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgttccccct 16450323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 16645230 - 16645145
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttct 232  Q
    |||||||||||||||| |||||| ||  |||||||| |||||| | |   || |||||||| ||| ||||||||||||||||||||    
T  16645230 ctttcgcaccggtttccgacccaccacaggtgggcgactaatcagactcatgtgtagaggcatgcacactggccaagcgttgttct 16645145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 30317346 - 30317261
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||| || ||||||| |||||| ||  |||||||| ||||| ||||  |||||||||||| | || ||||||||||||||||||    
T  30317346 actttcacatcggtttccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcattcgtactggccaagcgttgttc 30317261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 42722575 - 42722660
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||||  ||||||  |  ||||  || ||||||||||   ||||||||||| |||||||||||||||||||||||    
T  42722575 actttcgcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttc 42722660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 1940779 - 1940862
Alignment:
Q  150 tcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||||  |||||| ||  |||||||| ||||||||||  |||||||||||| |||||||   ||||||||||||| ||||    
T  1940779 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccct 1940862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 20532436 - 20532492
Alignment:
Q  175 ggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||| || |||||||   ||||||||||| |||||||||||||||||||||||    
T  20532436 ggtgggcgacttatccggctcatgcgtagaggcatgcgcactggccaagcgttgttc 20532492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 47682381 - 47682461
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgtt 227  Q
    |||||||||||||||| |||||| ||  |||||||| |||| |||||  |||||||||| | || ||||||||||| ||||    
T  47682381 ctttcgcaccggtttccgacccaccaaaggtgggcgactaacccggctcgtgcgtagagacatgtgcactggccaaacgtt 47682461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 49952144 - 49952228
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgg-gcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    ||||||||||||||||  ||||||||  ||||  ||| ||||||||||   ||||||||||||||||||||| |||| |||||||    
T  49952144 ctttcgcaccggtttccaacccatcaaaggtgacgcgactaatccggctcatgcgtagaggcgtgcgcactgaccaaacgttgtt 49952228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 1446912 - 1446849
Alignment:
Q  173 ttggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||| || ||||||||||   ||||||||||| ||||||||||||||| ||||||| ||||    
T  1446912 ttggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccct 1446849  T

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Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 10541127 - 10541045
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||||||||| || ||||||  ||||| ||  ||||| |||  |||||||||||| ||| ||||||||||||||||||    
T  10541127 ctttcgcaccggtttccgatccatcaaaggtgg-cgattaatctggctcgtgcgtagaggcatgcacactggccaagcgttgtt 10541045  T

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Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 14567351 - 14567276
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaa 222  Q
    ||||||||||| |||| |||||| ||  || | ||| ||||||||||  |||||||||||| ||||||||||||||    
T  14567351 ctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaa 14567276  T

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Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 15829813 - 15829730
Alignment:
Q  145 aactttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttg 228  Q
    ||||||||||||||||||||| ||| || ||||||  | ||||||||||   ||| |||| || ||||||||||||||| ||||    
T  15829813 aactttcgcaccggtttctgatccaccaatggtggaggactaatccggctcatgcctagaagcatgcgcactggccaagtgttg 15829730  T

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Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 20354699 - 20354660
Alignment:
Q  197 tgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  20354699 tgcgtagaggcatgcgcactagccaagcgttgttctccct 20354660  T

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Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 48317279 - 48317358
Alignment:
Q  152 gcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||| ||||||  ||||||||  |||||||| ||||||||||  |||||||||||| | | ||||| |||||||||||||    
T  48317279 gcactggtttccaacccatcaacggtgggcgactaatccggctcgtgcgtagaggcatacacactgaccaagcgttgttc 48317358  T

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Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 295534 - 295616
Alignment:
Q  149 ttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||  ||||| ||  ||||| || |||||| ||   |||||||||||| |||||||||||||| ||||||||    
T  295534 ttcgcaccggtttcaaacccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcactggccaaacgttgttc 295616  T

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Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 40272380 - 40272414
Alignment:
Q  197 tgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||| |||||||||||||||||||||||    
T  40272380 tgcgtagaggcatgcgcactggccaagcgttgttc 40272414  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 20421885 - 20421796
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||| || |||||| ||||||||| || ||| ||  ||||| |||   ||||||||||| ||||||||||||||| ||||||| ||||    
T  20421885 ctttcgaactggtttccgacccatcaatgatggacgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccct 20421796  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 230
Target Start/End: Complemental strand, 38075495 - 38075462
Alignment:
Q  197 tgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    ||||||||||| ||||||||||||||||||||||    
T  38075495 tgcgtagaggcatgcgcactggccaagcgttgtt 38075462  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 41339421 - 41339478
Alignment:
Q  174 tggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||| |||||||| |  |||||||||||| | | |||||||||||||||||||    
T  41339421 tggtgggcgactaatccgtctcgtgcgtagaggcatacacactggccaagcgttgttc 41339478  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 55921146 - 55921057
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| ||  |||| |||  |||||||||   | ||||||||| ||||||||| ||||| ||||||| ||||    
T  55921146 ctttcgcaccggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccct 55921057  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 4738730 - 4738646
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| |||||| ||  ||||| || ||||| | ||   ||||||||| | ||||||||||| |||||||||||    
T  4738730 ctttcgcaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactggcaaagcgttgttc 4738646  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 21429411 - 21429323
Alignment:
Q  149 ttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    |||||||||||||| |||||| ||  ||||| || ||| || | |  |||||||||||| ||||||||||| || |||||||| |||||    
T  21429411 ttcgcaccggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttcccccta 21429323  T

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Target: scaffold0010 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 155710 - 155799
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||| ||| |||||| ||  |||||||| ||||||||||  |||||||||||| |||||||| |||||||||||||| ||||    
T  155710 ctttcgcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttccccct 155799  T

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Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 25784 - 25873
Alignment:
Q  148 tttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    ||||||||||||||||||||||  |  |||||| | |||||| ||     |||||||| | |||||||||||||||||||||||||||||    
T  25784 tttcgcaccggtttctgacccagtaaaggtgggtgactaatctggttcacgcgtagagtcatgcgcactggccaagcgttgttctcccta 25873  T

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Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 42291505 - 42291593
Alignment:
Q  148 tttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||||||| || ||||||  ||||| || ||||||||||  |||||||||||| || |||||||||||||||||||| ||||    
T  42291505 tttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttcaccct 42291593  T

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Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 1538539 - 1538450
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| || |||||| ||  |||||||||   ||||||||||| ||||||||||||||| ||||||| ||||    
T  1538539 ctttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccct 1538450  T

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Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 9805112 - 9805023
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||| ||||| |||||| ||  ||||| || ||||||||||   ||||||||||| ||||||||||||||||||||||| ||||    
T  9805112 ctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccct 9805023  T

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Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 25417182 - 25417271
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||||||||||||||| || ||||    | ||||||||||  || ||||||||| ||||||||||||||||||||||| ||||    
T  25417182 ctttcgcaccggtttctgacccaccaatggtaaatgactaatccggctcgttcgtagaggcatgcgcactggccaagcgttgttccccct 25417271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 42086435 - 42086346
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| ||  ||||| || ||||||||||   ||||||||||| |||||||||| |||||||||||| ||||    
T  42086435 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccct 42086346  T

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Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 7866689 - 7866605
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||| ||||||| ||||| ||  |||||||| |||||||||   |||||||||||| ||| |||||||||||||||||||    
T  7866689 ctttcgcactggtttctaacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttc 7866605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 9812980 - 9812896
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||||||||||| ||  |||||||| |||||||||    |||||||| || ||| |||||||||||||||||||    
T  9812980 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaagcgttgttc 9812896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 38897718 - 38897802
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||| |||||| || ||| ||  |||||||  ||||||||||  |||||||||||| |||||||||||||||||||||||    
T  38897718 ctttcgcactggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 38897802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 14728191 - 14728109
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgt 229  Q
    |||||||||||||||| |||||||||  |||| ||  ||||||||||   ||||||||||| ||||||||| |||||||||||    
T  14728191 ctttcgcaccggtttccgacccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgt 14728109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 4016254 - 4016343
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||| |||||| |||||| || ||||| ||  ||||||||||  ||| |||||||| ||||||||||||||| ||||||| ||||    
T  4016254 ctttcgcactggtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcactggccaagtgttgttccccct 4016343  T

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Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 20682616 - 20682705
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||||||||  |||||  |  ||||| ||  |||||||||  |||||||||||| ||||||||||||||||||||||| ||||    
T  20682616 ctttcgcaccggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccct 20682705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 39099778 - 39099867
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||| ||||||||||| |||||| ||  |||||||| ||||||||||   ||||||||||| || |||||||||||| ||||||| ||||    
T  39099778 cttttgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgttccccct 39099867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 12705122 - 12705038
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||||||||||| ||  |||||||| |||||||||    |||||||| || ||| |||||| ||||||||||||    
T  12705122 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttc 12705038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 12766239 - 12766155
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||||||||||| ||  |||||||| |||||| ||    ||||||||||| ||| |||||||||||| ||||||    
T  12766239 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatctggttcatgcgtagaggcatgcacactggccaagcattgttc 12766155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 38369807 - 38369723
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||| ||||| ||||||||  ||||||   |||||||| |  |||||||||||| ||||||||||||||| |||||||    
T  38369807 ctttcgcaccgatttctaacccatcaaaggtgggttactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttc 38369723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 8513627 - 8513544
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||||||||| |||||| ||  ||||| || |||||| |||  |||||||||||| || ||||||||||||| |||||    
T  8513627 ctttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtt 8513544  T

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Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 20525945 - 20525862
Alignment:
Q  148 tttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||| || ||| || |||||| || ||||||||||   ||||||||||| ||||||||||| ||| |||||||    
T  20525945 tttcgcaccggtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttc 20525862  T

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Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 37263347 - 37263264
Alignment:
Q  148 tttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||| || |||  |  ||||| || ||||||||||  |||||||||||| |||||| ||||||||||||||||    
T  37263347 tttcgcaccggtttccgatccaataaaggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttgttc 37263264  T

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Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 42861217 - 42861300
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    ||||||||||||| || |||||| || |||||| ||  |||||||||   ||||||||||| ||||||||||||||| ||||||    
T  42861217 ctttcgcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt 42861300  T

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Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 18262617 - 18262706
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||| |||  || ||||||  |||||||| ||||||||||  ||| |||||||  |||||||||| |||||||||||| ||||    
T  18262617 ctttcgcaccgattttcgatccatcagaggtgggcgactaatccggctcgtgtgtagaggtatgcgcactggtcaagcgttgttccccct 18262706  T

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Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 19572832 - 19572743
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||| ||||||  ||||| || |||||  || ||||||||||   ||||||||||| ||||||||||||||| ||||||| ||||    
T  19572832 ctttcgcactggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccct 19572743  T

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Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 23383765 - 23383676
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||| ||||| |||||| ||  ||||| || ||||||| ||   |||||||||||  |||||||||||||||||||||| ||||    
T  23383765 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccct 23383676  T

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Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 24463884 - 24463969
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||| ||||||||||  ||||||  |  |||||||| ||||||||||  |||| ||||||| |||||||||||||| ||||||||    
T  24463884 acttttgcaccggttttcgacccagtaaaggtgggcgactaatccggctcgtgcatagaggcatgcgcactggccaatcgttgttc 24463969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 43399236 - 43399147
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||| | ||   |||| || ||||||| ||  |||||||||||| ||||||||||||||||||| ||| ||||    
T  43399236 ctttcgcaccggtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcactggccaagcgttattccccct 43399147  T

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Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 40117473 - 40117434
Alignment:
Q  197 tgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  40117473 tgcgtagaggcatgcgcactggccaagcgttgttccccct 40117434  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 3653941 - 3653999
Alignment:
Q  175 ggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctc 233  Q
    ||||| || |||||||| |  |||||||||||| |||||||||| ||||||||||||||    
T  3653941 ggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgttgttctc 3653999  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 7308370 - 7308452
Alignment:
Q  154 accggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||| ||| ||||||  |||| ||| ||||||||||   ||||||||||| || |||||| ||||||||||||| ||||    
T  7308370 accggtttttgatccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgtgcactgcccaagcgttgttccccct 7308452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 24875441 - 24875363
Alignment:
Q  159 tttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    |||| |||||||||  ||||| ||  |||||||||  |||||||||| | |||||||||| ||| ||||||||||||||    
T  24875441 tttccgacccatcaaaggtggacgattaatccggctcgtgcgtagagacatgcgcactggtcaaacgttgttctcccta 24875363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 11845800 - 11845889
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||| ||||||||||  ||||||||  ||||||||  |||| ||||   | ||||||||| |||||||||||||| |||||||| ||||    
T  11845800 ctttcacaccggtttccaacccatcaaaggtgggcgattaattcggctcatacgtagaggcatgcgcactggccaaacgttgttccccct 11845889  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 12081988 - 12081927
Alignment:
Q  175 ggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||| || ||||| ||||  ||||||||| || ||||||||||||||||||||||| ||||    
T  12081988 ggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgttccccct 12081927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 24653811 - 24653899
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||| ||||||  |||||| || |||||| ||  ||||||||| | ||||||||||  ||||||||| ||||| ||||||||||||    
T  24653811 ctttcgcatcggttttcgacccaccaatggtggacgattaatccggcta-tgcgtagaggtatgcgcactgaccaagtgttgttctccct 24653899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 231
Target Start/End: Original strand, 5731971 - 5732003
Alignment:
Q  199 cgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||| |||||||||||||||||||||||    
T  5731971 cgtagaggcatgcgcactggccaagcgttgttc 5732003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 9168280 - 9168336
Alignment:
Q  175 ggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||| || ||||||||||   ||||||||||  |||||||||||||||||||||||    
T  9168280 ggtggacgactaatccggctcatgcgtagaggtatgcgcactggccaagcgttgttc 9168336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 30995192 - 30995140
Alignment:
Q  184 ctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||  |||||||||||| ||||| ||||||||| ||||||| ||||    
T  30995192 ctaatccggctcgtgcgtagaggcatgcgccctggccaagtgttgttccccct 30995140  T

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Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 15320293 - 15320209
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||||||||||| ||  |||||||| ||||||||||  |||||||||||| ||| |||||||||| | ||||||    
T  15320293 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttc 15320209  T

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Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 51682955 - 51683043
Alignment:
Q  148 tttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||| |||||| |||||| |||||||||||| ||||||||||  ||| | |||||| |||||||||| |||||||||||| ||||    
T  51682955 tttcgcactggtttccgacccaccattggtgggcgactaatccggctcgtgtggagaggcatgcgcactggtcaagcgttgttccccct 51683043  T

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Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 3507534 - 3507617
Alignment:
Q  148 tttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||| |||||| ||  |||| ||| ||||||||||  |||||||||||| ||||||||||||||| |||||||    
T  3507534 tttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttc 3507617  T

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Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 28572211 - 28572294
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||||||||| |||||| ||  |||||||| ||||||||||  |||||||||||| |||  |||||||||||||||||    
T  28572211 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtt 28572294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 47219251 - 47219168
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||||||||| |||||||||  ||||| || ||||||||||   ||||||||||| |||||||| |||||||||||||    
T  47219251 ctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtt 47219168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 50405608 - 50405686
Alignment:
Q  152 gcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    ||||||||||| |||||| || ||||||||| |||||||| |  |||||||||||| |||||||||| |||||||||||    
T  50405608 gcaccggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtt 50405686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 26043919 - 26043830
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||| |||||||||||| || ||  |||| ||| ||||||||||   ||||||||||| ||||||||||||||| ||||||||||||    
T  26043919 ctttcgccccggtttctgactcaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttctccct 26043830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 29128026 - 29127937
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||| ||||||| |||||| ||  |||||||| ||||||||||   ||||||||||| ||||||||| ||||| ||||||||||||    
T  29128026 ctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccct 29127937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 45877563 - 45877478
Alignment:
Q  145 aactttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||||||||||| ||||||||| |||||  || ||||||||||   ||||||||||| || |||||||||||| ||||||    
T  45877563 aactttcgcaccggtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtt 45877478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 15795494 - 15795578
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||| ||||||||||  |||||| |||||||||||| ||||| | ||  |||||||||||| ||||||||| |||||||||||||    
T  15795494 cttttgcaccggttttcgacccaccattggtgggcgactaattcagctcgtgcgtagaggcatgcgcactgaccaagcgttgttc 15795578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 43330732 - 43330815
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||| |||||||| ||||||| ||  |||||||| ||||||||||  |||||||||||| |||||||||| |||| ||||||    
T  43330732 ctttcgtaccggtttttgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgtt 43330815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 30767246 - 30767336
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||  ||||| |||||| ||  |||||||| ||||||||||  |||||||||||| ||| ||||||||||| ||||||| ||||    
T  30767246 actttcgcactagtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccct 30767336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 49198449 - 49198368
Alignment:
Q  156 cggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    |||||||||| ||| || |||||| || ||||||||||   ||||||||||| ||||||||||||||| ||||||| |||||    
T  49198449 cggtttctgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcccccta 49198368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 54261334 - 54261249
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||||| ||||||  |  ||||  || ||||||||||   ||||||||||| |||||||||||||||||||||||    
T  54261334 actttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttc 54261249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 6462482 - 6462430
Alignment:
Q  184 ctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||   ||||||||||| ||||||||||||||||||||||||||||    
T  6462482 ctaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttctccct 6462430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 26361967 - 26362051
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||| |||||||||| |||||||||  |||| ||| ||||||||||  |||||||||||| ||| ||||| |||| ||||||||    
T  26361967 ctttcacaccggtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgttc 26362051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 47749105 - 47749189
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||| ||||||| |||| | ||  |||||||| ||||| ||||  |||||||||||| ||||||||||||||| |||||||    
T  47749105 ctttcgcatcggtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaagagttgttc 47749189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 25295067 - 25294984
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    ||||||||||||||||  ||||| || |||||| || ||||||||||   ||| ||||||| ||||||||||||||| ||||||    
T  25295067 ctttcgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtt 25294984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 29762155 - 29762238
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||||||||||| |||||| || |||||| || ||||||| ||   ||| ||||||| ||||||||||||||| ||||||    
T  29762155 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgtt 29762238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 49021203 - 49021274
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactgg 218  Q
    |||||||||||||||| |||||| || |||||| || ||||||||||   ||||||||||| ||||||||||    
T  49021203 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 49021274  T

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Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 4638259 - 4638178
Alignment:
Q  149 ttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||| ||||||| ||||||| |  |||||||  ||||||||||  |||||||||||  |||||||||| |||||||||||    
T  4638259 ttcgcatcggtttccgacccattaaaggtgggctactaatccggctcgtgcgtagaggtatgcgcactggtcaagcgttgtt 4638178  T

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Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 7328950 - 7328862
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||  |||||| ||  |||||||| ||||||||||   |||||| |||| ||||||||||||||| ||||||| ||||    
T  7328950 ctttcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccct 7328862  T

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Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 7650334 - 7650245
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||||||||  ||||| ||  |||||||| ||||||||||  |||||||||| | | || |||||||||| ||||||| ||||    
T  7650334 ctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccct 7650245  T

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Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 13894033 - 13893944
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||  || ||| ||  |||||||| ||||||||||  ||| |||||||| |||||| || ||||||||||||| ||||    
T  13894033 ctttcgcaccggttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccct 13893944  T

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Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 29136020 - 29135931
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||| |||||||||  ||||| || ||||||  | ||||||||||   ||||||||||| ||||||||||||||| ||||||| ||||    
T  29136020 ctttcgtaccggtttccaacccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccct 29135931  T

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Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 35316063 - 35315974
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||| ||||||| |||||| ||   ||||||| ||||||| ||   ||||||||||| ||||||||||||||| ||||||| ||||    
T  35316063 ctttcgcatcggtttccgacccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaagtgttgttccccct 35315974  T

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Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 51060281 - 51060370
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| || |||||| || ||||||| |    ||||||||||| ||||||||| ||||| ||||||| ||||    
T  51060281 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaagtgttgttccccct 51060370  T

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Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 54237555 - 54237466
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| ||||||  | |||||| || || |||||||   ||||||||| | ||||||||| ||||| ||||||||||||    
T  54237555 ctttcgcaccggtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcactgaccaagtgttgttctccct 54237466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 8164632 - 8164576
Alignment:
Q  175 ggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||| |||||||| |  ||||||| |||| |||||||||||||||||||||||    
T  8164632 ggtgggcgactaatccgactcgtgcgtaaaggcatgcgcactggccaagcgttgttc 8164576  T

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Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 10040659 - 10040579
Alignment:
Q  151 cgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||  ||||| ||  ||||| || | | ||||||  |||||||||||| |||||||||||||||||||||||    
T  10040659 cgcaccggtttccaacccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 10040579  T

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Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 55069679 - 55069763
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||| ||||||||||| |||||| ||  |||| |||  |||||||||  |||||||||||| || ||||||||||| ||||||||    
T  55069679 cttttgcaccggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgttc 55069763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 39849149 - 39849094
Alignment:
Q  176 gtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||| ||||||||||   ||||||||||| ||| |||||||||||||||||||    
T  39849149 gtgggcgactaatccggctcatgcgtagaggcatgcacactggccaagcgttgttc 39849094  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 2029268 - 2029350
Alignment:
Q  148 tttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgtt 230  Q
    |||||||| |||||  ||||||||| ||||||||| ||||||| ||   ||||||||||| |||| |||  ||||||||||||    
T  2029268 tttcgcactggtttgcgacccatcaatggtgggcgactaatccagctcatgcgtagaggcatgcgtactaaccaagcgttgtt 2029350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 30045928 - 30045838
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    |||||||||  ||||  |||||||||  ||||| || |||||| | |  |||||||||| | ||||||||||||||||||||||| |||||    
T  30045928 ctttcgcactagtttacgacccatcaaaggtggacgactaatcagactcgtgcgtagagacatgcgcactggccaagcgttgttcccccta 30045838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 7648819 - 7648758
Alignment:
Q  175 ggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||| ||||||||||  |||||||||||  |||||||||| ||| |||||||| ||||    
T  7648819 ggtgggcgactaatccggctcgtgcgtagaggtatgcgcactggtcaaacgttgttccccct 7648758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 3136694 - 3136778
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| |||| | ||  ||||| || |||||||| |   ||||||||||| ||||||||| ||||| |||||||    
T  3136694 ctttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactgcccaagtgttgttc 3136778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 10855442 - 10855402
Alignment:
Q  196 gtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||| |||| |||||||||||||||||| ||||    
T  10855442 gtgcgtagaggcatgcgtactggccaagcgttgttccccct 10855402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 19147068 - 19146984
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| |||||| ||  ||||| || ||||||| ||  |||| ||||||  | | |||||||||||||||||||    
T  19147068 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcgtgcatagagggatacacactggccaagcgttgttc 19146984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 36043674 - 36043730
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtag 203  Q
    |||||||||||||||| |||||| ||  |||||||| ||||||||||  ||||||||    
T  36043674 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtag 36043730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 41630540 - 41630596
Alignment:
Q  175 ggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||| ||||||||||   || |||||||| |||||||||| ||||||||||||    
T  41630540 ggtgggcgactaatccggctcatgtgtagaggcatgcgcactgggcaagcgttgttc 41630596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 48342077 - 48342037
Alignment:
Q  197 tgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    ||||||||||| |||||||| |||||||||||||| |||||    
T  48342077 tgcgtagaggcatgcgcactagccaagcgttgttcccccta 48342037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 237
Target Start/End: Complemental strand, 50682522 - 50682494
Alignment:
Q  209 tgcgcactggccaagcgttgttctcccta 237  Q
    |||||||||||||||||||||||||||||    
T  50682522 tgcgcactggccaagcgttgttctcccta 50682494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 53649833 - 53649745
Alignment:
Q  148 tttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||||||| || ||||||  ||||  || ||||||||||   ||||||||| |  |||||||||||||| ||||||| ||||    
T  53649833 tttcgcaccggtttccgatccatcaaaggtgaacgactaatccggctcatgcgtagagacaggcgcactggccaagtgttgttcaccct 53649745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 9945 - 9866
Alignment:
Q  157 ggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||||| ||  ||||| || ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||    
T  9945 ggtttctgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccct 9866  T

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Target: scaffold0009 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 42830 - 42921
Alignment:
Q  146 actttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    ||||||||||||||||| |||||| ||  |||||||| ||||||||||   || |||||||| ||||||||| |||||| ||||||||||||    
T  42830 actttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgaccaagcattgttctcccta 42921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 6965 - 6876
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||| |||||| ||  |||| ||| ||||||||||   ||||||||||| ||||||||||||||| ||||||| ||||    
T  6965 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccct 6876  T

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Target: scaffold0086 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 26293 - 26204
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||| |||||| ||| ||||| | |||| || ||||||||||  |||||||||||| ||| ||||||||||||||||||| ||||    
T  26293 ctttcgcactggtttccgactcatcaattgtggacgactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgttccccct 26204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 12683 - 12599
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    ||||||||||||||||| | ||||||  |||||||| |||||||| |   ||||||||||| |||||||||| ||||||||||||    
T  12683 ctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgttc 12599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 149495 - 149406
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||| |||||||||||||||||| |||||||||||| ||||||   |  || ||||||||| ||| |||||| |||||||||||| ||||    
T  149495 cttttgcaccggtttctgacccaccattggtgggcgactaatctacctcgtacgtagaggcatgcacactggtcaagcgttgttccccct 149406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 8700 - 8789
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||| ||||| |||||| ||  ||||| || ||||||| ||   |||||||||||  |||||||||||||||||||||| ||||    
T  8700 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccct 8789  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 68621 - 68538
Alignment:
Q  150 tcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    ||||||||||||  |||||| ||  |||||||| ||||||||||  |||||||||||| |||||||   ||||||||||||| ||||    
T  68621 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccct 68538  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 7834 - 7910
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaag 223  Q
    |||||| ||||||||| || ||| ||  |||||||| ||||||| || | ||||||||||| |||||||||||||||    
T  7834 ctttcgtaccggtttccgatccaccaaaggtgggcgactaatccagctaatgcgtagaggcatgcgcactggccaag 7910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 250024 - 250099
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaa 222  Q
    ||||||||||| |||| |||||| ||  || | ||| ||||||||||  |||||||||||| ||||||||||||||    
T  250024 ctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaa 250099  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 319532 - 319442
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctcccta 237  Q
    |||||||||||||||| | |||| ||  ||||| || ||||||| ||   ||| ||||||  ||||||||||||||||||||||| |||||    
T  319532 ctttcgcaccggtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactggccaagcgttgttcccccta 319442  T

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Target: scaffold0316 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 1613 - 1702
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttctccct 236  Q
    |||||||||||||||  |||||| ||  |||||||| |||||  |||   ||||||||||| ||||||||||| || |||||||| ||||    
T  1613 ctttcgcaccggttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcactggctaatcgttgttccccct 1702  T

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Target: scaffold0029 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 41154 - 41070
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||| ||||||||| ||| || ||  | |||||| ||||||||||  |||||||||||| ||| ||||| ||||| |||||||    
T  41154 ctttcgaaccggtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttc 41070  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 65151 - 65235
Alignment:
Q  147 ctttcgcaccggtttctgacccatcattggtgggcggctaatccggcaagtgcgtagaggcgtgcgcactggccaagcgttgttc 231  Q
    |||||||||||||||| || | ||||   ||| ||| ||||||| ||   ||||||||| | |||||||||||||||||||||||    
T  65151 ctttcgcaccggtttccgatctatcaaaagtgagcgactaatccagctcatgcgtagagacatgcgcactggccaagcgttgttc 65235  T

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