View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17256_high_15 (Length: 243)
Name: NF17256_high_15
Description: NF17256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17256_high_15 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 4 - 243
Target Start/End: Original strand, 41472187 - 41472426
Alignment:
| Q |
4 |
gatgaacaagtaaaaataccaactaaactaaacccttgtttaaaccaacaaaaacaagggaattagcatcttcaatcctctccatccaatccaatatctc |
103 |
Q |
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| T |
41472187 |
gatgaacaagtaaaaataccaactaaactaaacccttgtttaaaccaacaaaaacaagggaattagcatcttcaatcctctccatccaatccaatatctc |
41472286 |
T |
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| Q |
104 |
caacatttccttcatactttctctttacaatattcttcacgcttatacctcaatcccattaccccatttacaagctgcaattcacttcacagcttctcta |
203 |
Q |
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| T |
41472287 |
caacatttccttcatactttctctttacaatattcttcacgcttatacctcaatcccattaccccatttacaagctgcaattcacttcacagcttctcta |
41472386 |
T |
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| Q |
204 |
cctctgcaatgatcaaccatcaagcaatcagtataaacac |
243 |
Q |
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| T |
41472387 |
cctctgcaatgatcaaccatcaaacaatcagtataaacac |
41472426 |
T |
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