View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17256_low_13 (Length: 287)
Name: NF17256_low_13
Description: NF17256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17256_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 270
Target Start/End: Original strand, 38707625 - 38707882
Alignment:
| Q |
13 |
agaacctgtggtttttgcaacaactttatgaagatgttgaaataaaatacaatttacttgcgtgacgctttgtgggaataatttaattcacagtagtgtg |
112 |
Q |
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| T |
38707625 |
agaacatgtggtttttgcaacaactttatgaagatgttgaaataaaatacaatttacttgcgtgacgctttgtgggaataatttaattcacagtagtgtg |
38707724 |
T |
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| Q |
113 |
aaatattg-nnnnnnntggtatacggcactaagtagatcaataggtatatttgtcgcattaggggatgagtttttcctagacgtgttgctacaaatacat |
211 |
Q |
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| T |
38707725 |
aaatattgaaaaaaaatggtatacggcactaagtagatcaataggtatatttgtcgcattaggggatgagtttttcctagacgtgttgctacaaatacat |
38707824 |
T |
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| Q |
212 |
aaatattgcacgcaccaagtcnnnnnnncttgtgcaattatgatcagttttactgagaa |
270 |
Q |
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| T |
38707825 |
aaatattgcacgcaccaagt-tttttttcttgtgcaattatgatcagttttactgagaa |
38707882 |
T |
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