View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17259_high_27 (Length: 404)
Name: NF17259_high_27
Description: NF17259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17259_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 382; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 44432005 - 44432390
Alignment:
| Q |
1 |
cacggatctcaaccaaccaatcaccgaactctttgttcacttttctctctatgtaagaacgaatttctggaatcttcttctcaagcatcttcttcaaagt |
100 |
Q |
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| T |
44432005 |
cacggatctcaaccaaccaatcaccgaactctttgttcacttttctctctatgtaagaacgaatttctggaatcttcttctcaagcatcttcttcaaagt |
44432104 |
T |
|
| Q |
101 |
cgacgacgccgttttatccaaataatctctctcaatagcatccacacacttcaacgccatgtagaagttatcaccagcgagatgcgcgttcgcgcgtgaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
44432105 |
cgacgacgccgttttatccaaataatctctctcaatagcatccacacacttcaacgccatgtagaagttgtcaccagcgagatgcgcgttcgcgcgtgaa |
44432204 |
T |
|
| Q |
201 |
caaacttccgttaactgaacacacgattcaactgaatcgatagcgaggttaacattcttcgaaacgttacgcgtttcgacgaatgaatcgagtgatgtta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44432205 |
caaacttccgttaactgaacacacgattcaactgaatcgatagcgaggttaacattcttcgaaacgttacgcgtttcgacgaatgaatcgagtgatgtta |
44432304 |
T |
|
| Q |
301 |
gaagaggacgagcaacggactgaagcttggaattcgaatcggagagtgatgacttgagagattcaacgtcggagagaagagatcgg |
386 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44432305 |
gaagaggacgagcaacggactgaagcttggaattcgaatcggagagtgatgacttgagagattcaacgtcggagagaagagatcgg |
44432390 |
T |
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