View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17259_high_55 (Length: 221)
Name: NF17259_high_55
Description: NF17259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17259_high_55 |
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Alignment Details
Target: chr7 (Bit Score: 134; Significance: 6e-70; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 19 - 203
Target Start/End: Complemental strand, 19508818 - 19508639
Alignment:
| Q |
19 |
cttctatttatgttccatcatagttcaagaatttagattcatcttaagcatagaggttgagttgtgtttggtattttgcattgacaacattgtccnnnnn |
118 |
Q |
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| T |
19508818 |
cttctatttatgttccatcatagttcaagaatttagattcatcttaagcatagacgttgagttgtgtttggtattttgcattgacaacattgtcc-tttt |
19508720 |
T |
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| Q |
119 |
nngtcataccaattaccaaatcaagtactcaactaaccatgcttgaaatccaaggctacgtagtattattcctattatggttcat |
203 |
Q |
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|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19508719 |
ttgtcacaccaattaccaaatcaagtactc----aaccatgcttgaaatccaaggctacgtagtattattcctattatggttcat |
19508639 |
T |
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