View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17259_low_49 (Length: 250)
Name: NF17259_low_49
Description: NF17259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17259_low_49 |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 1848714 - 1848955
Alignment:
| Q |
1 |
tgttcaatgatttccctcttgtcaaactgaattataaatcttcctcaactcacagtgctgcgtttagagttaaatctgcattggcatctggagggggtga |
100 |
Q |
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| T |
1848714 |
tgttcaatgatttccctcttgtcaaactgaattataaatcttcctcaactcacagtgctgcgtttagagttaaatctgcattggcatctggagggggtga |
1848813 |
T |
|
| Q |
101 |
cctactttcgtatcccaaaaacaccaatgatattatcattggcaaagatctcgttgttggtgctcaatctattctagtccaggaacaatctaatggaacc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
1848814 |
cctactttcgtatcccaaaaacaccaatgatattatcattggcaaagatctcgttgttggtactcaatctattctagtccaggaacaatctaatggaacc |
1848913 |
T |
|
| Q |
201 |
ccgacatcagactcagggttaccaagcacttttttctctgct |
242 |
Q |
| |
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|||||||||||||||||| ||||||||||||||||||||||| |
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| T |
1848914 |
ccgacatcagactcagggataccaagcacttttttctctgct |
1848955 |
T |
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