View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1725_high_6 (Length: 248)
Name: NF1725_high_6
Description: NF1725
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1725_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 1033314 - 1033502
Alignment:
| Q |
19 |
ggtgtatcaaaattttattgtactcttttttgttttgctatggtaaatggtgttacagtagtgactgttgtcttcagttgcaggaacctagtaaagaatt |
118 |
Q |
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| T |
1033314 |
ggtgtatcaaaattttattgtactcttttttgttttgctatggtaaatggtgttgtagtagtgactgttgtcttcagttgcaggaacctagtaaagaatt |
1033413 |
T |
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| Q |
119 |
gccaaagctactggataatgcttcatatttgattcatttggctgtttttggtattctcggggtaatattctatcctccgaacctcaatg |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
1033414 |
gccaaagctactggataatgcttcatatttgattcatttggctgtttttggtattctcggggtaatattctatcctccgaacttcaatg |
1033502 |
T |
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