View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17260_high_1 (Length: 1412)

Name: NF17260_high_1
Description: NF17260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17260_high_1
NF17260_high_1
[»] chr5 (79 HSPs)
chr5 (218-492)||(8637739-8638007)
chr5 (231-491)||(2873521-2873775)
chr5 (218-535)||(8645084-8645395)
chr5 (231-473)||(2844093-2844329)
chr5 (231-473)||(2855926-2856162)
chr5 (354-535)||(8678722-8678903)
chr5 (232-485)||(9073723-9073970)
chr5 (232-485)||(1599291-1599538)
chr5 (232-326)||(8529805-8529899)
chr5 (45-166)||(8644833-8644954)
chr5 (388-485)||(9004389-9004486)
chr5 (227-490)||(8547123-8547380)
chr5 (1038-1112)||(13210512-13210586)
chr5 (46-166)||(8637489-8637609)
chr5 (1040-1114)||(9066090-9066165)
chr5 (43-149)||(8547482-8547588)
chr5 (1040-1114)||(27309482-27309556)
chr5 (1044-1114)||(37106569-37106639)
chr5 (388-473)||(2904045-2904130)
chr5 (1041-1114)||(4621735-4621808)
chr5 (1041-1114)||(6245802-6245875)
chr5 (1041-1114)||(37274261-37274334)
chr5 (1041-1114)||(38768841-38768914)
chr5 (46-166)||(1599682-1599802)
chr5 (1044-1112)||(18979019-18979087)
chr5 (1038-1114)||(43548054-43548130)
chr5 (1040-1114)||(4155747-4155822)
chr5 (1040-1106)||(25085409-25085476)
chr5 (1040-1106)||(25143381-25143448)
chr5 (1051-1114)||(40739721-40739784)
chr5 (1044-1111)||(42436797-42436864)
chr5 (1040-1114)||(43293286-43293361)
chr5 (232-314)||(8536369-8536451)
chr5 (1041-1111)||(31499379-31499449)
chr5 (1044-1114)||(37341394-37341463)
chr5 (1041-1114)||(10665625-10665698)
chr5 (1041-1114)||(31485213-31485286)
chr5 (1041-1114)||(41881342-41881415)
chr5 (1044-1115)||(4155756-4155828)
chr5 (46-166)||(9074120-9074240)
chr5 (1040-1114)||(13145485-13145560)
chr5 (1040-1114)||(19034324-19034399)
chr5 (1040-1114)||(37866282-37866357)
chr5 (1044-1115)||(38760006-38760077)
chr5 (1052-1114)||(8233132-8233194)
chr5 (1044-1105)||(43293295-43293357)
chr5 (384-485)||(8536515-8536616)
chr5 (1041-1114)||(15272167-15272240)
chr5 (1041-1114)||(18522554-18522627)
chr5 (1044-1100)||(37866291-37866348)
chr5 (42-166)||(8529537-8529661)
chr5 (1044-1115)||(9066084-9066156)
chr5 (1044-1115)||(13145494-13145566)
chr5 (1044-1115)||(19034333-19034405)
chr5 (1037-1114)||(19351662-19351741)
chr5 (1044-1115)||(25085403-25085475)
chr5 (1044-1115)||(25143375-25143447)
chr5 (51-166)||(8536110-8536225)
chr5 (384-490)||(8529945-8530051)
chr5 (1068-1114)||(10552764-10552810)
chr5 (1038-1108)||(31484889-31484959)
chr5 (225-326)||(2904186-2904287)
chr5 (1041-1114)||(7339362-7339435)
chr5 (45-166)||(8678439-8678560)
chr5 (1038-1098)||(6245477-6245537)
chr5 (1044-1080)||(6245781-6245817)
chr5 (229-269)||(8678639-8678679)
chr5 (1040-1080)||(10665683-10665723)
chr5 (1038-1098)||(18864866-18864926)
chr5 (1040-1111)||(36294473-36294546)
chr5 (1044-1083)||(12188813-12188852)
chr5 (1040-1114)||(38759997-38760071)
chr5 (1036-1098)||(10665896-10665958)
chr5 (1040-1106)||(18978590-18978656)
chr5 (1044-1105)||(35318943-35319005)
chr5 (1038-1080)||(36294447-36294489)
chr5 (1038-1108)||(41881646-41881716)
chr5 (1040-1098)||(43548471-43548529)
chr5 (1038-1091)||(42437117-42437170)
[»] scaffold0627 (2 HSPs)
scaffold0627 (227-479)||(5478-5724)
scaffold0627 (47-137)||(5289-5379)
[»] chr6 (27 HSPs)
chr6 (229-490)||(16717193-16717448)
chr6 (1041-1114)||(6926318-6926391)
chr6 (1041-1114)||(8525721-8525794)
chr6 (1041-1114)||(11368371-11368444)
chr6 (1041-1114)||(34085294-34085367)
chr6 (1040-1114)||(7141620-7141695)
chr6 (1040-1114)||(13889647-13889722)
chr6 (1040-1114)||(32173287-32173361)
chr6 (1044-1115)||(6625734-6625806)
chr6 (1044-1115)||(13889656-13889728)
chr6 (1040-1114)||(6167588-6167663)
chr6 (1044-1114)||(6625744-6625815)
chr6 (1040-1114)||(29121956-29122031)
chr6 (1035-1114)||(29622912-29622991)
chr6 (1040-1114)||(29630103-29630178)
chr6 (1041-1114)||(13444770-13444843)
chr6 (1044-1115)||(7141614-7141686)
chr6 (1044-1115)||(29121965-29122037)
chr6 (1044-1115)||(29630112-29630184)
chr6 (1063-1114)||(23350937-23350988)
chr6 (1041-1114)||(31090783-31090856)
chr6 (1068-1100)||(13444901-13444933)
chr6 (1038-1106)||(31090937-31091005)
chr6 (1048-1131)||(33659876-33659959)
chr6 (1017-1098)||(11368686-11368765)
chr6 (1065-1115)||(18894126-18894176)
chr6 (1073-1114)||(6675469-6675510)
[»] chr4 (70 HSPs)
chr4 (232-326)||(9443966-9444060)
chr4 (1044-1114)||(22847527-22847597)
chr4 (1038-1112)||(42131215-42131289)
chr4 (1041-1114)||(3027020-3027093)
chr4 (1041-1114)||(40430818-40430891)
chr4 (1044-1114)||(34159908-34159978)
chr4 (1040-1114)||(50469574-50469648)
chr4 (1041-1114)||(3025819-3025892)
chr4 (1041-1114)||(10480828-10480901)
chr4 (1041-1114)||(11691404-11691477)
chr4 (1041-1114)||(13961887-13961960)
chr4 (1041-1114)||(24035040-24035113)
chr4 (1041-1114)||(32933200-32933273)
chr4 (1041-1114)||(35339144-35339217)
chr4 (1041-1114)||(37829445-37829518)
chr4 (1041-1114)||(43621160-43621233)
chr4 (1041-1114)||(48990957-48991030)
chr4 (1038-1114)||(36852242-36852318)
chr4 (1040-1114)||(19873688-19873763)
chr4 (1040-1114)||(20434519-20434594)
chr4 (1044-1114)||(28406054-28406125)
chr4 (1040-1114)||(42349107-42349182)
chr4 (1040-1114)||(42723747-42723822)
chr4 (1040-1114)||(53874651-53874726)
chr4 (1040-1114)||(55183133-55183208)
chr4 (1044-1114)||(24897378-24897448)
chr4 (1041-1114)||(1523373-1523446)
chr4 (1041-1114)||(20292828-20292901)
chr4 (1041-1114)||(22301275-22301348)
chr4 (1041-1114)||(30215310-30215383)
chr4 (1041-1114)||(47429242-47429315)
chr4 (1053-1114)||(47466962-47467023)
chr4 (1041-1114)||(50561901-50561974)
chr4 (1044-1100)||(51323072-51323129)
chr4 (1044-1115)||(20434513-20434585)
chr4 (1044-1115)||(53874660-53874732)
chr4 (1040-1114)||(614280-614354)
chr4 (1040-1114)||(55220274-55220349)
chr4 (1041-1111)||(7318708-7318778)
chr4 (1044-1105)||(42349111-42349173)
chr4 (1009-1112)||(7794767-7794869)
chr4 (1041-1114)||(8713682-8713755)
chr4 (1041-1114)||(32135946-32136019)
chr4 (42-166)||(9443698-9443822)
chr4 (1044-1115)||(28406063-28406135)
chr4 (1044-1080)||(35339202-35339238)
chr4 (1017-1115)||(51323040-51323139)
chr4 (1040-1114)||(55215209-55215284)
chr4 (1062-1112)||(37682801-37682851)
chr4 (1063-1113)||(41201862-41201912)
chr4 (1068-1114)||(48348877-48348923)
chr4 (1038-1096)||(48348985-48349043)
chr4 (1044-1100)||(42723756-42723813)
chr4 (1044-1115)||(614274-614345)
chr4 (1044-1115)||(55183142-55183214)
chr4 (1044-1115)||(55220268-55220340)
chr4 (1049-1096)||(11691090-11691137)
chr4 (1044-1114)||(19873697-19873768)
chr4 (1044-1106)||(24897377-24897439)
chr4 (1038-1101)||(47467029-47467092)
chr4 (384-490)||(9444106-9444212)
chr4 (1040-1115)||(25858041-25858114)
chr4 (1040-1115)||(25858047-25858120)
chr4 (1048-1098)||(50601953-50602003)
chr4 (1066-1111)||(3020164-3020209)
chr4 (1065-1106)||(7818123-7818164)
chr4 (1044-1100)||(15659038-15659095)
chr4 (1073-1114)||(20738188-20738229)
chr4 (1041-1098)||(51322013-51322070)
chr4 (1044-1096)||(55215218-55215271)
[»] chr7 (60 HSPs)
chr7 (232-490)||(48360839-48361090)
chr7 (43-149)||(35780429-35780536)
chr7 (1044-1114)||(10594581-10594651)
chr7 (1040-1114)||(46924309-46924384)
chr7 (1041-1114)||(7883418-7883491)
chr7 (1041-1114)||(12429389-12429462)
chr7 (1041-1114)||(25226010-25226083)
chr7 (1041-1114)||(40862950-40863023)
chr7 (1041-1114)||(43776860-43776933)
chr7 (1041-1114)||(47010887-47010960)
chr7 (1041-1114)||(48613401-48613474)
chr7 (1040-1114)||(8215266-8215341)
chr7 (1040-1114)||(21278606-21278681)
chr7 (1051-1114)||(29042469-29042532)
chr7 (384-535)||(35780855-35781006)
chr7 (1041-1112)||(36688240-36688311)
chr7 (1040-1114)||(43246580-43246655)
chr7 (1041-1112)||(43501742-43501813)
chr7 (1040-1114)||(47065488-47065563)
chr7 (1042-1112)||(42435956-42436026)
chr7 (1040-1114)||(48873974-48874048)
chr7 (1041-1114)||(12846972-12847045)
chr7 (1041-1114)||(40305118-40305191)
chr7 (1041-1114)||(44709517-44709590)
chr7 (1041-1114)||(45869812-45869885)
chr7 (1041-1114)||(46102267-46102340)
chr7 (1044-1115)||(8215275-8215347)
chr7 (1044-1115)||(21278615-21278687)
chr7 (1044-1115)||(26015448-26015520)
chr7 (1044-1115)||(35924531-35924603)
chr7 (1051-1114)||(19474771-19474834)
chr7 (1040-1106)||(26015447-26015514)
chr7 (1041-1112)||(39597270-39597341)
chr7 (1051-1114)||(47540876-47540939)
chr7 (1049-1114)||(32541733-32541799)
chr7 (1041-1114)||(35924538-35924612)
chr7 (1041-1114)||(20493266-20493339)
chr7 (1044-1100)||(32541742-32541799)
chr7 (1044-1115)||(40995588-40995660)
chr7 (1044-1115)||(46924303-46924375)
chr7 (1044-1114)||(40995598-40995669)
chr7 (1040-1085)||(21874139-21874185)
chr7 (1041-1103)||(24981421-24981483)
chr7 (228-326)||(35780705-35780803)
chr7 (1017-1098)||(43776506-43776585)
chr7 (45-166)||(48361234-48361355)
chr7 (1038-1106)||(7883499-7883567)
chr7 (1040-1080)||(25225985-25226025)
chr7 (1040-1114)||(25877212-25877285)
chr7 (1063-1115)||(32661966-32662018)
chr7 (1044-1115)||(43246589-43246661)
chr7 (1044-1115)||(47065497-47065569)
chr7 (1041-1104)||(41469783-41469846)
chr7 (1040-1114)||(42095104-42095179)
chr7 (955-993)||(25066608-25066646)
chr7 (1073-1114)||(7900907-7900948)
chr7 (1049-1098)||(21202623-21202672)
chr7 (1044-1115)||(25877206-25877276)
chr7 (1073-1114)||(46321661-46321702)
chr7 (1024-1080)||(48613362-48613416)
[»] chr3 (52 HSPs)
chr3 (1044-1114)||(2612757-2612827)
chr3 (1041-1114)||(48585200-48585273)
chr3 (1038-1114)||(31608039-31608115)
chr3 (1040-1114)||(10840998-10841073)
chr3 (1040-1114)||(38871532-38871607)
chr3 (1040-1114)||(30419255-30419329)
chr3 (1044-1114)||(44353828-44353898)
chr3 (1041-1114)||(7680661-7680734)
chr3 (1041-1114)||(38144673-38144746)
chr3 (1041-1114)||(52813522-52813595)
chr3 (1040-1112)||(33392974-33393046)
chr3 (1040-1114)||(4044381-4044456)
chr3 (1040-1114)||(7149572-7149647)
chr3 (1051-1114)||(24200068-24200131)
chr3 (1040-1114)||(36430723-36430798)
chr3 (1040-1114)||(37971279-37971354)
chr3 (1040-1114)||(41070291-41070366)
chr3 (1041-1114)||(4515610-4515684)
chr3 (1041-1107)||(11124449-11124515)
chr3 (1059-1112)||(18168135-18168188)
chr3 (1041-1114)||(35155210-35155283)
chr3 (1041-1114)||(35233174-35233247)
chr3 (1041-1114)||(41589267-41589340)
chr3 (1041-1114)||(49779304-49779377)
chr3 (1044-1115)||(4044390-4044462)
chr3 (1044-1115)||(4515619-4515691)
chr3 (1040-1114)||(33712288-33712364)
chr3 (1044-1115)||(36430717-36430789)
chr3 (1044-1115)||(37971288-37971360)
chr3 (1044-1115)||(41070285-41070357)
chr3 (1040-1114)||(7153171-7153246)
chr3 (1040-1114)||(10999357-10999432)
chr3 (1041-1112)||(36840158-36840229)
chr3 (1041-1111)||(19942154-19942224)
chr3 (1044-1115)||(10841007-10841079)
chr3 (1044-1115)||(10999366-10999438)
chr3 (1044-1115)||(38871526-38871598)
chr3 (1038-1114)||(47097819-47097895)
chr3 (1040-1114)||(53974689-53974764)
chr3 (1069-1114)||(20656859-20656904)
chr3 (1069-1114)||(32236737-32236782)
chr3 (1044-1115)||(33712297-33712370)
chr3 (1044-1096)||(53974702-53974755)
chr3 (1044-1115)||(7149581-7149653)
chr3 (1038-1098)||(36232356-36232416)
chr3 (1038-1098)||(38144987-38145047)
chr3 (1068-1115)||(10999441-10999488)
chr3 (1036-1098)||(2613069-2613131)
chr3 (1040-1106)||(36840997-36841063)
chr3 (1038-1080)||(41589240-41589282)
chr3 (1073-1114)||(22781414-22781455)
chr3 (1064-1105)||(39626454-39626495)
[»] chr1 (65 HSPs)
chr1 (1044-1114)||(35274347-35274417)
chr1 (1050-1114)||(40499059-40499123)
chr1 (1040-1114)||(40400431-40400506)
chr1 (1040-1114)||(52044006-52044081)
chr1 (1040-1114)||(32086993-32087067)
chr1 (1044-1114)||(32117566-32117636)
chr1 (1041-1114)||(1441825-1441898)
chr1 (1041-1114)||(6016107-6016180)
chr1 (1041-1114)||(12602420-12602493)
chr1 (1041-1114)||(23443789-23443862)
chr1 (1041-1114)||(26308084-26308157)
chr1 (1041-1114)||(29921380-29921453)
chr1 (1041-1114)||(32561932-32562005)
chr1 (1041-1114)||(48933796-48933869)
chr1 (1041-1114)||(51001525-51001598)
chr1 (1044-1112)||(41713351-41713419)
chr1 (1040-1114)||(13234932-13235007)
chr1 (1024-1114)||(19247393-19247481)
chr1 (1040-1114)||(24317586-24317661)
chr1 (1040-1111)||(24663832-24663903)
chr1 (1040-1114)||(34270375-34270450)
chr1 (1044-1114)||(5673382-5673452)
chr1 (1041-1114)||(7009490-7009563)
chr1 (1041-1114)||(8113366-8113439)
chr1 (1053-1114)||(9640165-9640226)
chr1 (1053-1114)||(13073632-13073693)
chr1 (1041-1114)||(19513709-19513782)
chr1 (1041-1114)||(45941945-45942018)
chr1 (1044-1115)||(24317580-24317652)
chr1 (1044-1115)||(34270384-34270456)
chr1 (1040-1114)||(13236793-13236868)
chr1 (1059-1114)||(14289788-14289843)
chr1 (1040-1114)||(42948597-42948672)
chr1 (1063-1114)||(46291215-46291266)
chr1 (1052-1114)||(1702327-1702389)
chr1 (1065-1114)||(40536259-40536308)
chr1 (1042-1114)||(52025059-52025132)
chr1 (1038-1114)||(17702504-17702580)
chr1 (1044-1115)||(40400425-40400497)
chr1 (1044-1115)||(52044015-52044087)
chr1 (1051-1101)||(17474912-17474962)
chr1 (1038-1080)||(32561905-32561947)
chr1 (1044-1105)||(52025061-52025123)
chr1 (1041-1114)||(3486205-3486278)
chr1 (1044-1105)||(18909586-18909647)
chr1 (1041-1114)||(24527242-24527315)
chr1 (1041-1098)||(24664094-24664151)
chr1 (1044-1096)||(51676834-51676887)
chr1 (1038-1098)||(1441701-1441761)
chr1 (1044-1080)||(6016165-6016201)
chr1 (1038-1098)||(8113455-8113515)
chr1 (1044-1115)||(13234941-13235013)
chr1 (1038-1098)||(29921718-29921778)
chr1 (1044-1115)||(42948591-42948663)
chr1 (1040-1111)||(51676828-51676900)
chr1 (1040-1114)||(18909582-18909656)
chr1 (1040-1114)||(11172961-11173038)
chr1 (1036-1106)||(14290020-14290090)
chr1 (1036-1098)||(19247512-19247574)
chr1 (1068-1114)||(20581968-20582014)
chr1 (1036-1098)||(32117631-32117693)
chr1 (1040-1115)||(49823584-49823657)
chr1 (1073-1114)||(39568988-39569029)
chr1 (1073-1114)||(39982811-39982852)
chr1 (1073-1114)||(44722345-44722386)
[»] chr2 (34 HSPs)
chr2 (1041-1114)||(31640045-31640118)
chr2 (1052-1112)||(13479981-13480041)
chr2 (1040-1114)||(10554460-10554534)
chr2 (1040-1114)||(44799163-44799237)
chr2 (1041-1114)||(7722047-7722120)
chr2 (1041-1114)||(26171611-26171684)
chr2 (1041-1114)||(38628581-38628654)
chr2 (1041-1112)||(10522121-10522192)
chr2 (1040-1114)||(13195791-13195866)
chr2 (1040-1114)||(34202711-34202786)
chr2 (1040-1114)||(40811326-40811401)
chr2 (1041-1112)||(44456357-44456428)
chr2 (1040-1114)||(45443158-45443232)
chr2 (1042-1114)||(1520635-1520708)
chr2 (1053-1114)||(4072903-4072964)
chr2 (1041-1114)||(4331046-4331119)
chr2 (1041-1114)||(16313134-16313207)
chr2 (1041-1114)||(40658798-40658871)
chr2 (1044-1115)||(13195800-13195872)
chr2 (1044-1115)||(34202705-34202777)
chr2 (1044-1115)||(40811335-40811407)
chr2 (1041-1112)||(8034272-8034343)
chr2 (1044-1105)||(1520637-1520699)
chr2 (1041-1114)||(458043-458115)
chr2 (1069-1114)||(31569199-31569244)
chr2 (1038-1098)||(4073237-4073297)
chr2 (1038-1098)||(4331392-4331452)
chr2 (1038-1098)||(38628895-38628955)
chr2 (1036-1098)||(13480044-13480106)
chr2 (1068-1114)||(25852990-25853036)
chr2 (1073-1114)||(2390271-2390312)
chr2 (1073-1114)||(21658361-21658402)
chr2 (1073-1114)||(42343402-42343443)
chr2 (1040-1114)||(44143819-44143891)
[»] chr8 (56 HSPs)
chr8 (1036-1112)||(44953449-44953525)
chr8 (1040-1114)||(3032535-3032610)
chr8 (1040-1114)||(3136835-3136910)
chr8 (1040-1114)||(24822325-24822400)
chr8 (1041-1114)||(4006283-4006356)
chr8 (1041-1114)||(38234952-38235025)
chr8 (1041-1114)||(44026111-44026184)
chr8 (1051-1114)||(5347073-5347136)
chr8 (1040-1114)||(15840200-15840275)
chr8 (1051-1114)||(38459547-38459610)
chr8 (1040-1113)||(2827797-2827870)
chr8 (1041-1114)||(31793246-31793319)
chr8 (1041-1114)||(33771805-33771878)
chr8 (1041-1114)||(39713113-39713186)
chr8 (1041-1114)||(42687390-42687463)
chr8 (1041-1114)||(44696079-44696152)
chr8 (1044-1115)||(15840194-15840266)
chr8 (1044-1115)||(42512585-42512657)
chr8 (1041-1112)||(42512592-42512664)
chr8 (1040-1114)||(17602054-17602129)
chr8 (1041-1112)||(35329281-35329352)
chr8 (1041-1112)||(38168018-38168089)
chr8 (1063-1114)||(43576349-43576400)
chr8 (1040-1114)||(43663942-43664017)
chr8 (1052-1114)||(36057154-36057215)
chr8 (1041-1114)||(11266644-11266717)
chr8 (1041-1114)||(12722946-12723019)
chr8 (1041-1114)||(44704223-44704296)
chr8 (1051-1114)||(6107-6171)
chr8 (1044-1115)||(3032544-3032616)
chr8 (1044-1115)||(3136844-3136916)
chr8 (1044-1115)||(17602048-17602120)
chr8 (1044-1115)||(24822334-24822406)
chr8 (1044-1115)||(43663951-43664023)
chr8 (1040-1114)||(5599484-5599559)
chr8 (1040-1114)||(26290370-26290445)
chr8 (1040-1114)||(26303627-26303702)
chr8 (1040-1114)||(34564655-34564730)
chr8 (1060-1114)||(26992062-26992116)
chr8 (1038-1112)||(32910809-32910885)
chr8 (1044-1096)||(34564664-34564717)
chr8 (1041-1114)||(38946314-38946387)
chr8 (1044-1115)||(5599493-5599565)
chr8 (1044-1115)||(26290379-26290451)
chr8 (1044-1115)||(26303636-26303708)
chr8 (1038-1098)||(33771729-33771789)
chr8 (1040-1080)||(44696054-44696094)
chr8 (1038-1098)||(44704312-44704372)
chr8 (1051-1114)||(1848618-1848681)
chr8 (1059-1106)||(16635950-16635997)
chr8 (1050-1114)||(40184451-40184519)
chr8 (1038-1108)||(31793574-31793644)
chr8 (1063-1105)||(39365681-39365723)
chr8 (1038-1108)||(42687665-42687735)
chr8 (1073-1114)||(23356848-23356889)
chr8 (1038-1099)||(36057216-36057277)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1041-1112)||(365395-365466)
scaffold0003 (1038-1080)||(365451-365493)
[»] scaffold0578 (1 HSPs)
scaffold0578 (1041-1114)||(9157-9230)
[»] scaffold0847 (1 HSPs)
scaffold0847 (1063-1114)||(1-52)
[»] scaffold0368 (2 HSPs)
scaffold0368 (1040-1114)||(14270-14345)
scaffold0368 (1044-1115)||(14264-14336)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1041-1112)||(200351-200422)
[»] scaffold0438 (2 HSPs)
scaffold0438 (1040-1114)||(1707-1782)
scaffold0438 (1044-1115)||(1716-1788)
[»] scaffold0062 (2 HSPs)
scaffold0062 (1040-1114)||(40934-41009)
scaffold0062 (1044-1096)||(40947-41000)


Alignment Details
Target: chr5 (Bit Score: 72; Significance: 4e-32; HSPs: 79)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 218 - 492
Target Start/End: Original strand, 8637739 - 8638007
Alignment:
Q  218 agttggtatcacgaagaggaagtttgaatataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatag 317  Q
    |||||| || |||||||||||| || ||||||||||||||||| |||||||| ||||||||  |||||||||||||| ||||| ||||||||||||| |     
T  8637739 agttggcattacgaagaggaagcttaaatataggcgcaagcttcacatgattgttgcttccaatctcaaacttttcatgatcacactcaagaaggtacat 8637838  T
Q  318 ggttcttgatacaagtttattattaaattccgagggccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaata 417  Q
    ||||||||| || ||| ||  || |  |      | ||||||||||| || |    | | | | | ||| |||||||||||||||  |||||| |||||     
T  8637839 ggttcttgacactagtctaccatcattt------gtccgaatcatgagactaaggggcgctcgctcaaattgcaatttagcaaaatgtggttccgaaatc 8637932  T
Q  418 agtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcagaatttgggtg 492  Q
    | || ||||||| |  |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  8637933 attgttttccaaatcttgcacacacatttacaaatgagaagagacttaatggaaagttgaagcagaatttgggtg 8638007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 231 - 491
Target Start/End: Complemental strand, 2873775 - 2873521
Alignment:
Q  231 aagaggaagtttgaatataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttgataca 330  Q
    ||||||||| | |||||||||  ||||||| |||||||| ||||||||  |||||||||||||||  ||  ||||||||||||||||| ||||||| ||     
T  2873775 aagaggaagctcgaatatagggtcaagcttcacatgattgttgcttccaatctcaaacttttcagcttcgcactcaagaaggtataggtttcttgacact 2873676  T
Q  331 agtttattat-taaattccgagggccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttccaa 429  Q
      | |||| | |||||| |||       |||| ||||| |  | ||| | | | ||| |||||||||||||||  |||||||||||||||||  ||||||    
T  2873675 cctatattgtctaaatttcga-------atcacgaaactaactggtgctcgctcaaattgcaatttagcaaaatgtggttctgaaataagtgtattccaa 2873583  T
Q  430 tttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcagaatttgggt 491  Q
     || |||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||    
T  2873582 gttttgcacacacatctacacatgagaagagacttaatgggaagttgaagaagaatgtgggt 2873521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 218 - 535
Target Start/End: Original strand, 8645084 - 8645395
Alignment:
Q  218 agttggtatcacgaagaggaagtttgaatataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatag 317  Q
    |||||| || |||||||||||| || |||||||| |||||||||||| || | ||||||||  | | |||||||||||||||| ||||||||||||| |     
T  8645084 agttggcattacgaagaggaagcttaaatataggtgcaagcttgacacgactgttgcttccaatttgaaacttttcaggatcacactcaagaaggtacat 8645183  T
Q  318 ggttcttgatacaagtttattattaaattccgagggccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaata 417  Q
     |||||||| || ||| ||   | |  |  |      |||||||||| ||||  ||||| | | | ||||| |||||||||||||  |||||||||||||    
T  8645184 agttcttgacactagtctacagtcatctatc------cgaatcatgagacaaacttgtgatcgctcaaagttcaatttagcaaaatgtggttctgaaata 8645277  T
Q  418 agtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcagaatttgggtgatgagtggttcaggaagattatcaa 517  Q
    |||| ||||||| |  |||| ||||||  ||||||||||||||| ||||||||||| |||||||  || ||||  ||||   ||   |||||||||||||    
T  8645278 agtgttttccaaatcttgcacacacattcacaaatgagaagagatttaatgggaagatgaagcaacatgtgggcaatgatgtgtgatggaagattatcaa 8645377  T
Q  518 aatatggataaagctcat 535  Q
    | || |||||||||||||    
T  8645378 agtaaggataaagctcat 8645395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 231 - 473
Target Start/End: Complemental strand, 2844329 - 2844093
Alignment:
Q  231 aagaggaagtttgaatataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttgataca 330  Q
    ||||||||| | |||||||||  ||||||| |||||||| ||||||||  |||||||||||||||  ||| ||||||||||||||||| ||||||| ||     
T  2844329 aagaggaagctcgaatatagggtcaagcttcacatgatttttgcttccaatctcaaacttttcagcttcacactcaagaaggtataggtttcttgacact 2844230  T
Q  331 agtttattat-taaattccgagggccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttccaa 429  Q
      | |||| | |||||| |||       |||| ||||| |  | ||| | | | ||| |||||||||||||||  ||||||||| |||||||  ||||||    
T  2844229 cctatattgtctaaatttcga-------atcacgaaactaactggtgctcgctcaaattgcaatttagcaaaatgtggttctgatataagtgtattccaa 2844137  T
Q  430 tttgtgcagacacatctacaaatgagaagagacttaatgggaag 473  Q
     || |||| ||||||||||| |||||||||||||||||||||||    
T  2844136 attttgcacacacatctacatatgagaagagacttaatgggaag 2844093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 231 - 473
Target Start/End: Complemental strand, 2856162 - 2855926
Alignment:
Q  231 aagaggaagtttgaatataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttgataca 330  Q
    ||||||||| | |||||||||  ||||||| |||||||| ||||||||  |||||||||||||||  ||| ||||||||||||||||| ||||||| ||     
T  2856162 aagaggaagctcgaatatagggtcaagcttcacatgatttttgcttccaatctcaaacttttcagcttcacactcaagaaggtataggtttcttgacact 2856063  T
Q  331 agtttattat-taaattccgagggccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttccaa 429  Q
      | |||| | |||||| |||       |||| ||||| |  | ||| | | | ||| |||||||||||||||  ||||||||| |||||||  ||||||    
T  2856062 cctatattgtctaaatttcga-------atcacgaaactaactggtgctcgctcaaattgcaatttagcaaaatgtggttctgatataagtgtattccaa 2855970  T
Q  430 tttgtgcagacacatctacaaatgagaagagacttaatgggaag 473  Q
     || |||| ||||||||||| |||||||||||||||||||||||    
T  2855969 attttgcacacacatctacatatgagaagagacttaatgggaag 2855926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 354 - 535
Target Start/End: Original strand, 8678722 - 8678903
Alignment:
Q  354 ccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatg 453  Q
    ||||||||||| ||||  ||||| | | | ||||| |||||||||||||  ||||||||||||||||| ||||||| |  |||| |||||| ||||||||    
T  8678722 ccgaatcatgagacaaacttgtgatcgctcaaagttcaatttagcaaaatgtggttctgaaataagtgttttccaaatcttgcacacacatttacaaatg 8678821  T
Q  454 agaagagacttaatgggaagttgaagcagaatttgggtgatgagtggttcaggaagattatcaaaatatggataaagctcat 535  Q
    |||||||| ||||||||||| ||||||| ||| ||||  ||||   ||   |||||||||||||| || |||||||| ||||    
T  8678822 agaagagatttaatgggaagatgaagcaaaatgtgggcaatgatgtgtgatggaagattatcaaagtaaggataaagttcat 8678903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 232 - 485
Target Start/End: Complemental strand, 9073970 - 9073723
Alignment:
Q  232 agaggaagtttgaatataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttgatacaa 331  Q
    |||||||| |||||||||||| ||||||||||||| || ||||||||  |||||||||||||||| ||| ||||||||||||| | |||||| || ||      
T  9073970 agaggaagcttgaatataggctcaagcttgacatgtttgttgcttccaatctcaaacttttcaggttcacactcaagaaggtacatggttctcgacac-- 9073873  T
Q  332 gtttattattaaattccgagggccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatt 431  Q
     | || |||     ||   || ||||||||| |||| |  | ||| | | | ||| |||||||||||||||  ||||||||||||||||  ||||||| |    
T  9073872 -tctaatat---cgtcaagggtccgaatcataaaactaagtggtgctcgctcaaattgcaatttagcaaaatgtggttctgaaataagtcttttccaaat 9073777  T
Q  432 tgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcagaat 485  Q
    | |||| |||||| ||||||||||||||| ||| | ||||||| ||||||||||    
T  9073776 tttgcacacacatttacaaatgagaagaggcttgacgggaagtcgaagcagaat 9073723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 232 - 485
Target Start/End: Complemental strand, 1599538 - 1599291
Alignment:
Q  232 agaggaagtttgaatataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttgatacaa 331  Q
    |||||||| ||||| |||||||||||||| ||| |||  ||||||||  |||||||||||||||| ||| ||||||||||||| | ||||||||||||      
T  1599538 agaggaagcttgaacataggcgcaagcttcacacgatcgttgcttccaatctcaaacttttcaggttcacactcaagaaggtacaaggttcttgatactc 1599439  T
Q  332 gtttattattaaattccgagggccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatt 431  Q
    | | ||      | ||   || ||||||||||| || |  | ||| | | | ||||||| |||||||||||  || ||||||||| | || ||||||| |    
T  1599438 ggtaat------agtcattggtccgaatcatgagactaagtggtgatcgctcaaagtgcgatttagcaaaatgtgattctgaaatcaatgttttccaaat 1599345  T
Q  432 tgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcagaat 485  Q
    | |||| ||| || ||||||||||||| |||||||| |||||||||||||||||    
T  1599344 tttgcacacagatttacaaatgagaagcgacttaataggaagttgaagcagaat 1599291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 232 - 326
Target Start/End: Original strand, 8529805 - 8529899
Alignment:
Q  232 agaggaagtttgaatataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttga 326  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||||||  |||||||||| ||||| ||  ||||||||||||| |||||||||||    
T  8529805 agaggaagcttgaatataggtgcaagcttgacatgattgttgcttccaatctcaaacttatcaggctcgcactcaagaaggtacagggttcttga 8529899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 8644833 - 8644954
Alignment:
Q  45 agtagcttcaggaagtcttatgaactccccagtgaccggattgcaaatgactaaaggggttccgttatatgggtgacacaaacaaagcaagccgttgcaa 144  Q
    |||||||| |||||||||||| |||||||||||||| ||||||||||| ||||| ||  |||| | | |||| |||| ||||||||||||||| ||||||    
T  8644833 agtagctttaggaagtcttataaactccccagtgactggattgcaaattactaatggtcttccttcaaatggatgacgcaaacaaagcaagccattgcaa 8644932  T
Q  145 gaatttgcaacatgaaacttat 166  Q
    |||||  |||||  ||||||||    
T  8644933 gaattcacaacaccaaacttat 8644954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 388 - 485
Target Start/End: Original strand, 9004389 - 9004486
Alignment:
Q  388 tgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcagaat 485  Q
    |||||||||||||||  ||||| |||||||| || ||||||| |  |||| |||||||||||||| |||||||||||||||||||| |||||||||||    
T  9004389 tgcaatttagcaaaatgtggttatgaaataattgttttccaaatcttgcacacacatctacaaataagaagagacttaatgggaagatgaagcagaat 9004486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 227 - 490
Target Start/End: Complemental strand, 8547380 - 8547123
Alignment:
Q  227 cacgaagaggaagtttgaatataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttga 326  Q
    ||||||||||||| |||||||||||  ||||||| |||||||| ||||||||  |||  ||||||||||| ||| |||||||| |||| | |||||||||    
T  8547380 cacgaagaggaagcttgaatataggatcaagcttcacatgattgttgcttccaatcttgaacttttcaggctcacactcaagatggtacatggttcttga 8547281  T
Q  327 tacaagtttattattaaattccgagggccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttc 426  Q
     || ||| |||  | |  |      | || |||||| | ||||  ||||| |   | |||||||||||||||||||  | |||||||||||| || ||||    
T  8547280 cactagtctatcgtcatct------gtccaaatcattagacaaacttgtgatctctcaaagtgcaatttagcaaaatgttgttctgaaataattgttttc 8547187  T
Q  427 caatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcagaatttggg 490  Q
    ||| |  |||| |||||| ||||||||||||||||||| ||| |||||| ||||||||| ||||    
T  8547186 caaatcttgcaaacacatttacaaatgagaagagacttgatgtgaagtttaagcagaatgtggg 8547123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 1038 - 1112
Target Start/End: Complemental strand, 13210586 - 13210512
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    |||||||||| | ||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  13210586 tacatgtaaacttagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 13210512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 46 - 166
Target Start/End: Original strand, 8637489 - 8637609
Alignment:
Q  46 gtagcttcaggaagtcttatgaactccccagtgaccggattgcaaatgactaaaggggttccgttatatgggtgacacaaacaaagcaagccgttgcaag 145  Q
    ||||||||||||||| | || ||||||||||||||||| ||||||||   |||||||  | ||| | |||||  |||||||||||||||||| |||||||    
T  8637489 gtagcttcaggaagtttaataaactccccagtgaccgggttgcaaatcgataaagggtgttcgtcagatgggcaacacaaacaaagcaagccattgcaag 8637588  T
Q  146 aatttgcaacatgaaacttat 166  Q
    |||| ||||||  ||||||||    
T  8637589 aattcgcaacaccaaacttat 8637609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 9066090 - 9066165
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  9066090 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 9066165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 8547588 - 8547482
Alignment:
Q  43 gtagtagcttcaggaagtcttatgaactccccagtgaccggattgcaaatgactaaaggggttccgttatatgggtgacacaaacaaagcaagccgttgc 142  Q
    |||||||||||| ||||||||||||||||||| ||||  |||||||| || ||||||||| ||||| ||  ||| | | ||||||||||||||||  |||    
T  8547588 gtagtagcttcaagaagtcttatgaactcccctgtgattggattgcagatcactaaagggtttccggtagttggttcagacaaacaaagcaagccactgc 8547489  T
Q  143 aagaatt 149  Q
    |||||||    
T  8547488 aagaatt 8547482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 27309482 - 27309556
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| | ||||||| ||||||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  27309482 catgtaaaataagtttaagtaggttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 27309556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1044 - 1114
Target Start/End: Original strand, 37106569 - 37106639
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||| ||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  37106569 taaactcagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 37106639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 388 - 473
Target Start/End: Complemental strand, 2904130 - 2904045
Alignment:
Q  388 tgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaag 473  Q
    ||||||||||| ||  | ||||||||||||||||  |||||| || |||| ||||||||||| |||||||||||||||||||||||    
T  2904130 tgcaatttagcgaatttaggttctgaaataagtgtattccaaattttgcacacacatctacatatgagaagagacttaatgggaag 2904045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 4621735 - 4621808
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  4621735 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 4621808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 6245802 - 6245875
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  6245802 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 6245875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 37274334 - 37274261
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  37274334 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 37274261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 38768841 - 38768914
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  38768841 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 38768914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 46 - 166
Target Start/End: Complemental strand, 1599802 - 1599682
Alignment:
Q  46 gtagcttcaggaagtcttatgaactccccagtgaccggattgcaaatgactaaaggggttccgttatatgggtgacacaaacaaagcaagccgttgcaag 145  Q
    |||| |||||||||||||||||||||||||||||  || ||||| || ||||| ||| |||||  |||||||| | |||||||||| || || |||||||    
T  1599802 gtagattcaggaagtcttatgaactccccagtgattgggttgcagatcactaatgggtttccgaaatatgggtcagacaaacaaagtaaaccattgcaag 1599703  T
Q  146 aatttgcaacatgaaacttat 166  Q
    ||||  ||| || ||||||||    
T  1599702 aattcacaatattaaacttat 1599682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1044 - 1112
Target Start/End: Original strand, 18979019 - 18979087
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    |||| |||| |||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  18979019 taaactcagcttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 18979087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1038 - 1114
Target Start/End: Complemental strand, 43548130 - 43548054
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||| | || |||| ||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  43548130 tacatgtaaacttagattaagtaggtcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 43548054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 4155822 - 4155747
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  4155822 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 4155747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1106
Target Start/End: Original strand, 25085409 - 25085476
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaa 1106  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || ||||||||||||||||||    
T  25085409 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaa 25085476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1106
Target Start/End: Original strand, 25143381 - 25143448
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaa 1106  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || ||||||||||||||||||    
T  25143381 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaa 25143448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1051 - 1114
Target Start/End: Original strand, 40739721 - 40739784
Alignment:
Q  1051 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  40739721 agtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 40739784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1044 - 1111
Target Start/End: Complemental strand, 42436864 - 42436797
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaa 1111  Q
    |||| ||| ||||| |||||||||||||||||||||||||| || |||||||||||||||||| ||||    
T  42436864 taaactcaatttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaa 42436797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 43293361 - 43293286
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  43293361 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 43293286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 8536369 - 8536451
Alignment:
Q  232 agaggaagtttgaatataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggta 314  Q
    |||||||| ||||| |||||| |||| || |||||||  ||||||||  |||||||||||| |||||||||||||||||||||    
T  8536369 agaggaagcttgaacataggcacaagtttcacatgatcgttgcttccaatctcaaacttttgaggatcagactcaagaaggta 8536451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1041 - 1111
Target Start/End: Original strand, 31499379 - 31499449
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaa 1111  Q
    ||||||| | |||| || ||| |||||||||||||||||||||| || |||||||||||||||||||||||    
T  31499379 atgtaaactaagttaaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaaattaa 31499449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1044 - 1114
Target Start/End: Original strand, 37341394 - 37341463
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||| ||||||||| ||||||||||||| |||||||||||| || |||||||||||||||||| |||||||    
T  37341394 taaactcagtttaagtaggttatgtaaa-taagtttacatgaacctacttaaactgaatttaagttaacct 37341463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 10665698 - 10665625
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||| ||||||||| || |||||||||||||||||| |||||||    
T  10665698 atgtaaactaagtttaagtagattatgtaaactatgtttacatgaacctacttaaactgaatttaagttaacct 10665625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 31485213 - 31485286
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | |||| || ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  31485213 atgtaaactaagttgaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 31485286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 41881415 - 41881342
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | |||| || ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  41881415 atgtaaactaagttgaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 41881342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 4155756 - 4155828
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  4155756 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 4155828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 166
Target Start/End: Complemental strand, 9074240 - 9074120
Alignment:
Q  46 gtagcttcaggaagtcttatgaactccccagtgaccggattgcaaatgactaaaggggttccgttatatgggtgacacaaacaaagcaagccgttgcaag 145  Q
    ||||||||||||||||||||||||||||| ||||| || ||||| || ||| ||||| ||||| ||  ||| | | |||||||||| || || |||||||    
T  9074240 gtagcttcaggaagtcttatgaactcccctgtgactgggttgcagatcactgaagggtttccggtagttggttcagacaaacaaagtaaaccattgcaag 9074141  T
Q  146 aatttgcaacatgaaacttat 166  Q
    ||||  ||| || ||||||||    
T  9074140 aattcacaatatcaaacttat 9074120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 13145560 - 13145485
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||| ||||| |||||||    
T  13145560 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttaagttaacct 13145485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 19034399 - 19034324
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || ||||| |||||||||||| |||||||    
T  19034399 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctactttaactgaatttaagttaacct 19034324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 37866282 - 37866357
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||| ||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  37866282 catgaaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 37866357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 38760006 - 38760077
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| ||||||||||||||| |||||||||| || |||||||| ||| |||| || ||||||    
T  38760006 taaattcagtttaagtaggttatgtaaactgagtttacatgaacctacttaaattgagtttacatgaaccta 38760077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1052 - 1114
Target Start/End: Original strand, 8233132 - 8233194
Alignment:
Q  1052 gtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||| ||| |||||||||||||||||||| | || |||||||||||||||||| |||||||    
T  8233132 gtttaagtagattatgtaaactaagtttacacgaacctacttaaactgaatttaagttaacct 8233194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1044 - 1105
Target Start/End: Original strand, 43293295 - 43293357
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaattta 1105  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| ||||    
T  43293295 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagttta 43293357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 8536515 - 8536616
Alignment:
Q  384 aaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcaga 483  Q
    ||||||  |||||||||||  || ||||||||| | || ||||||| || |||| ||| || ||||||||||||| |||||||  |||||||||||||||    
T  8536515 aaagtgggatttagcaaaatgtgattctgaaatcaatgttttccaaattttgcacacagatttacaaatgagaagcgacttaaatggaagttgaagcaga 8536614  T
Q  484 at 485  Q
    ||    
T  8536615 at 8536616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 15272240 - 15272167
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||  ||| |||||||||||||||||||||| || ||||| |||||||||||| |||||||    
T  15272240 atgtaaactaagtttatgtagattatgtaaactaagtttacatgaacctacttgaactgaatttaagttaacct 15272167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 18522554 - 18522627
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||| |||| |||||||||||| || |||||||||||||||||| |||||||    
T  18522554 atgtaaactaagtttaagtagattatctaaattaagtttacatgaacctacttaaactgaatttaagttaacct 18522627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1044 - 1100
Target Start/End: Complemental strand, 37866348 - 37866291
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactga 1100  Q
    |||||||||||||| |||||| |||||||||||||||||||| || ||||||||||||    
T  37866348 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactga 37866291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 8529537 - 8529661
Alignment:
Q  42 tgtagtagcttcaggaagtcttatgaactccccagtgaccggattgcaaatgactaaaggggttccgttatatgggtgacacaaacaaagcaagccgttg 141  Q
    |||||||| |||||||||||||||||||||||| ||||| || ||||| || ||||  ||| ||||   | |||||| | |||||||||| || || |||    
T  8529537 tgtagtagattcaggaagtcttatgaactcccccgtgactgggttgcagatcactattgggtttccaaaagatgggtcagacaaacaaagtaaaccattg 8529636  T
Q  142 caagaatttgcaacatgaaacttat 166  Q
    ||||||||  ||| || ||||||||    
T  8529637 caagaattcacaatatcaaacttat 8529661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 9066156 - 9066084
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  9066156 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 9066084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 13145494 - 13145566
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  13145494 taaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 13145566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 19034333 - 19034405
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    ||||||||||| || |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  19034333 taaattcagttaaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 19034405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1037 - 1114
Target Start/End: Complemental strand, 19351741 - 19351662
Alignment:
Q  1037 atacatgtaaattcagtttaaataggttatgtaaactaagtttac--atgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||||| | || |||||| ||| |||||||||||||||||||  |||||| |||||||| ||||||||| |||||||    
T  19351741 atacatgtatactcggtttaagtagattatgtaaactaagtttacatatgtacctacttaaattgaatttaagttaacct 19351662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 25085475 - 25085403
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  25085475 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 25085403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 25143447 - 25143375
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  25143447 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 25143375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 166
Target Start/End: Original strand, 8536110 - 8536225
Alignment:
Q  51 ttcaggaagtcttatgaactccccagtgaccggattgcaaatgactaaaggggttccgttatatgggtgacacaaacaaagcaagccgttgcaagaattt 150  Q
    ||||||||||||||| |||||||||||||| || ||||| || ||||| ||| ||||   | |||||| | |||||||||| || || |||||||||||     
T  8536110 ttcaggaagtcttataaactccccagtgactgggttgcagatcactaatgggtttccaaaagatgggtcagacaaacaaagtaaaccattgcaagaattc 8536209  T
Q  151 gcaacatgaaacttat 166  Q
     ||| || ||||||||    
T  8536210 acaatatcaaacttat 8536225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 384 - 490
Target Start/End: Original strand, 8529945 - 8530051
Alignment:
Q  384 aaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcaga 483  Q
    ||||||| ||||||||||   || ||||||||||| || |||||||  | |||| |||||| |||||||||||| ||||||||  |||||| |||| |||    
T  8529945 aaagtgcgatttagcaaattgtgattctgaaataattgttttccaaactttgcacacacatttacaaatgagaacagacttaaatggaagtcgaaggaga 8530044  T
Q  484 atttggg 490  Q
    || ||||    
T  8530045 atgtggg 8530051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1068 - 1114
Target Start/End: Original strand, 10552764 - 10552810
Alignment:
Q  1068 taaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||||||||||||| || |||||||||||||||||| |||||||    
T  10552764 taaactaagtttacatgaacctacttaaactgaatttaagttaacct 10552810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1038 - 1108
Target Start/End: Original strand, 31484889 - 31484959
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaat 1108  Q
    |||||||||| | | ||||| ||||| ||||||||||||||||  ||||| |||||||||| |||||||||    
T  31484889 tacatgtaaacttattttaagtaggtcatgtaaactaagtttaagtgtacatacttaaactcaatttaaat 31484959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 2904287 - 2904186
Alignment:
Q  225 atcacgaagaggaagtttgaatataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttctt 324  Q
    ||||| ||||||||||| ||||||||||  |||||| ||| |||| ||| ||||   ||| |||| |||||| ||  ||||||||||||||||| |||||    
T  2904287 atcacaaagaggaagttcgaatataggcttaagcttcacaagattgttggttccaaactcgaactattcaggttcgcactcaagaaggtataggtttctt 2904188  T
Q  325 ga 326  Q
    ||    
T  2904187 ga 2904186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 7339362 - 7339435
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||  |||||||||||||||||||||| || | |||||||||||||| | |||||||    
T  7339362 atgtaaactaagtttaagtaaattatgtaaactaagtttacatgaacctgcttaaactgaattttagttaacct 7339435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 8678439 - 8678560
Alignment:
Q  45 agtagcttcaggaagtcttatgaactccccagtgaccggattgcaaatgactaaaggggttccgttatatgggtgacacaaacaaagcaagccgttgcaa 144  Q
    |||||||||| |||||||||| ||||| ||||| |  || || ||||| | |||||||  ||| | | |||||  |||||||||||||| ||| ||||||    
T  8678439 agtagcttcatgaagtcttataaactcgccagtaagtgggttacaaatcaataaagggtgtccctcaaatgggcaacacaaacaaagcatgccattgcaa 8678538  T
Q  145 gaatttgcaacatgaaacttat 166  Q
    ||||| ||||||  ||||||||    
T  8678539 gaattcgcaacaccaaacttat 8678560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1038 - 1098
Target Start/End: Original strand, 6245477 - 6245537
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  6245477 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 6245537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1044 - 1080
Target Start/End: Original strand, 6245781 - 6245817
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagttta 1080  Q
    |||| ||||||||||||||||||||||||||||||||    
T  6245781 taaactcagtttaaataggttatgtaaactaagttta 6245817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 8678639 - 8678679
Alignment:
Q  229 cgaagaggaagtttgaatataggcgcaagcttgacatgatt 269  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  8678639 cgaagaggaagcttaaatataggcgcaagcttgacatgatt 8678679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1040 - 1080
Target Start/End: Complemental strand, 10665723 - 10665683
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagttta 1080  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  10665723 catgtaaactcagtttaagtaggttatgtaaactaagttta 10665683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1038 - 1098
Target Start/End: Original strand, 18864866 - 18864926
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  18864866 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 18864926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1040 - 1111
Target Start/End: Original strand, 36294473 - 36294546
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtac---gtacttaaactgaatttaaattaa 1111  Q
    |||||||| | ||||||||||| |||||||||||||||||||||| ||    |||||||||||||||||| ||||    
T  36294473 catgtaaacttagtttaaatag-ttatgtaaactaagtttacatgaacctgctacttaaactgaatttaagttaa 36294546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1044 - 1083
Target Start/End: Original strand, 12188813 - 12188852
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacat 1083  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  12188813 taaattcagtttatgtaggttatgtaaactaagtttacat 12188852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 38760071 - 38759997
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||| ||||| |||||| ||||||||| |||||||||  || |||||||||||||||||| |||||||    
T  38760071 catgtaaactcaatttaagtaggttcatgtaaactcagtttacata-acctacttaaactgaatttaagttaacct 38759997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1098
Target Start/End: Complemental strand, 10665958 - 10665896
Alignment:
Q  1036 tatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||||| | | ||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  10665958 tatacatgtaaacttattttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 10665896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1040 - 1106
Target Start/End: Original strand, 18978590 - 18978656
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaa 1106  Q
    |||||||| | ||||| | ||||| ||||||||||||||||  ||||| |||||||||| |||||||    
T  18978590 catgtaaacttagtttcagtaggtcatgtaaactaagtttaagtgtacatacttaaactcaatttaa 18978656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1044 - 1105
Target Start/End: Original strand, 35318943 - 35319005
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaattta 1105  Q
    |||||||||||||| |||||| |||| || |||||||||||| || |||||||||||| ||||    
T  35318943 taaattcagtttaagtaggttcatgttaattaagtttacatgaacctacttaaactgagttta 35319005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1038 - 1080
Target Start/End: Original strand, 36294447 - 36294489
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagttta 1080  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  36294447 tacatataaattcagtttaaataggtcatgtaaacttagttta 36294489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1038 - 1108
Target Start/End: Complemental strand, 41881716 - 41881646
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaat 1108  Q
    |||||||||| | | ||||| ||||| ||||||||||||||||  ||||| |||||||||| | |||||||    
T  41881716 tacatgtaaacttattttaagtaggtcatgtaaactaagtttaagtgtacatacttaaactcagtttaaat 41881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1040 - 1098
Target Start/End: Complemental strand, 43548529 - 43548471
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||| | ||||| | ||||| ||||||||||||||||  ||||||||||||||||    
T  43548529 catgtaaacttagtttcagtaggtcatgtaaactaagtttaagtgtacgtacttaaact 43548471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1038 - 1091
Target Start/End: Complemental strand, 42437170 - 42437117
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtac 1091  Q
    |||||||||||| | ||||| ||||| ||||||||||||||||  |||||||||    
T  42437170 tacatgtaaatttattttaagtaggtcatgtaaactaagtttaagtgtacgtac 42437117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 65; Significance: 7e-28; HSPs: 2)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 65; E-Value: 7e-28
Query Start/End: Original strand, 227 - 479
Target Start/End: Original strand, 5478 - 5724
Alignment:
Q  227 cacgaagaggaagtttgaatataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttga 326  Q
    ||||||||| |||  ||||||||||| ||||||| |||||||| ||||||||  |||||||||||| ||||||  | |||||||||||||||||||||||    
T  5478 cacgaagagtaagcctgaatataggctcaagcttcacatgattgttgcttccaatctcaaactttttaggatcgcattcaagaaggtatagggttcttga 5577  T
Q  327 tacaagtttattattaaattccgagggccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttc 426  Q
     ||  || ||| | ||  ||     |  |||||||||| || | |  ||| | | | |||||| ||||||||||||  |||||||||||| | |||||||    
T  5578 cactcgtctat-agtatctt-----gttcgaatcatgagactaatcggtgatcgctcaaagtgtaatttagcaaaatgtggttctgaaatcattgctttc 5671  T
Q  427 caatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaag 479  Q
    ||| || |||| |||||| ||||||||||||||||||| ||||||||||||||    
T  5672 caaattttgcacacacatttacaaatgagaagagacttgatgggaagttgaag 5724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627; HSP #2
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 5289 - 5379
Alignment:
Q  47 tagcttcaggaagtcttatgaactccccagtgaccggattgcaaatgactaaaggggttccgttatatgggtgacacaaacaaagcaagcc 137  Q
    ||||||||||||||||||||||||||||  |||  || ||||| || ||||||||| ||||| ||  ||| ||| ||||||| ||||||||    
T  5289 tagcttcaggaagtcttatgaactcccccatgaatgggttgcagatcactaaagggtttccggtagttggttgagacaaacatagcaagcc 5379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 4e-26; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 229 - 490
Target Start/End: Original strand, 16717193 - 16717448
Alignment:
Q  229 cgaagaggaagtttgaatataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttgata 328  Q
    |||||||||||| ||||||||||| |||| || |||||||| ||||||||  ||||||||||||| |||||  |||| |||||||| ||||||||||| |    
T  16717193 cgaagaggaagtctgaatataggctcaagattcacatgattgttgcttccaatctcaaacttttctggatcgcactctagaaggtagagggttcttgaca 16717292  T
Q  329 caagtttattattaaattccgagggccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttcca 428  Q
    |  ||||| || ||  ||     |  |||||||||| || | || ||| ||| | |||||| ||||||||||||   | ||||||||| | |  ||||||    
T  16717293 ctcgttta-tagtatctt-----gttcgaatcatgagactaattggtgattgctcaaagtgtaatttagcaaaatgcgattctgaaatcattcttttcca 16717386  T
Q  429 atttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcagaatttggg 490  Q
    | || |||| |||||| ||||||||||||||||||| |||||||||||||||| ||| ||||    
T  16717387 aattttgcacacacatttacaaatgagaagagacttgatgggaagttgaagcaaaatgtggg 16717448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 6926318 - 6926391
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  6926318 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 6926391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 8525721 - 8525794
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  8525721 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 8525794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 11368444 - 11368371
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  11368444 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 11368371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 34085367 - 34085294
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  34085367 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 34085294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 7141620 - 7141695
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  7141620 catgtaaactcagtttaactaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 7141695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 13889722 - 13889647
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  13889722 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 13889647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 32173361 - 32173287
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| | ||||||| || ||||||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  32173361 catgtaaactaagtttaagtatgttatgtaaactaagtttacatgaacctacttaaacttaatttaagttaacct 32173287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 6625806 - 6625734
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  6625806 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttatatgaaccta 6625734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 13889656 - 13889728
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  13889656 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 13889728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 6167663 - 6167588
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| |||| ||||||||||||||| || |||||||||| ||||||| |||||||    
T  6167663 catgtaaactcagtttaagtaggttcatgttaactaagtttacatgaacctacttaaactaaatttaagttaacct 6167588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1044 - 1114
Target Start/End: Original strand, 6625744 - 6625815
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  6625744 taaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 6625815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 29122031 - 29121956
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||| | |||||||||| || |||||||||||||||||| |||||||    
T  29122031 catgtaaactcagtttaagtaggttcatgtaaatttagtttacatgaacctacttaaactgaatttaagttaacct 29121956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1035 - 1114
Target Start/End: Complemental strand, 29622991 - 29622912
Alignment:
Q  1035 ttatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||| ||||||| | ||||||| ||  |||||||||||||||||| ||| || |||||||||||||||||| |||||||    
T  29622991 ttatatatgtaaactaagtttaagtatattatgtaaactaagtttatatgaacctacttaaactgaatttaagttaacct 29622912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 29630178 - 29630103
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| |  |||||||||||||||||| |||||||    
T  29630178 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaatctacttaaactgaatttaagttaacct 29630103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 13444843 - 13444770
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||| ||||||||||||||||| |  |||||||||||||||||| |||||||    
T  13444843 atgtaaactaagtttaagtagattatttaaactaagtttacatgaatctacttaaactgaatttaatttaacct 13444770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 7141686 - 7141614
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || || ||||||||| |||| || ||||||    
T  7141686 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctagttaaactgagtttacatgaaccta 7141614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 29121965 - 29122037
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||||| |||||||| || |||||||||||| |||| || ||||||    
T  29121965 taaattcagtttaagtaggttcatgtaaactaaatttacatgaacctacttaaactgagtttacatgaaccta 29122037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 29630112 - 29630184
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| ||| || |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  29630112 taaattcagtttaagtagattcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 29630184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1063 - 1114
Target Start/End: Original strand, 23350937 - 23350988
Alignment:
Q  1063 ttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||||||||||||  || |||||||||||||||||| |||||||    
T  23350937 ttatgtaaactaagtttacatcaacctacttaaactgaatttaagttaacct 23350988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 31090856 - 31090783
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| ||||| |||| || |||||||| || |||||||||||||||||| |||||||    
T  31090856 atgtaaactaagtttaagtagattatgcaaacaaaatttacatgaacctacttaaactgaatttaagttaacct 31090783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1068 - 1100
Target Start/End: Original strand, 13444901 - 13444933
Alignment:
Q  1068 taaactaagtttacatgtacgtacttaaactga 1100  Q
    |||||||||||||||||||||||||||||||||    
T  13444901 taaactaagtttacatgtacgtacttaaactga 13444933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1038 - 1106
Target Start/End: Complemental strand, 31091005 - 31090937
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaa 1106  Q
    |||||||||| | | ||||| ||||| ||||||||||||||||  ||||| |||||||||| |||||||    
T  31091005 tacatgtaaacttattttaagtaggtcatgtaaactaagtttaagtgtacatacttaaactcaatttaa 31090937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1048 - 1131
Target Start/End: Complemental strand, 33659959 - 33659876
Alignment:
Q  1048 ttcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacctataaatgtttacttaaa 1131  Q
    |||||||||| ||| | || |||||| |||||| |  |||||||||||||||||||||| |||| ||  ||||| |||||||||    
T  33659959 ttcagtttaagtagatcatataaactgagtttaaacatacgtacttaaactgaatttaagttaatctcaaaatgattacttaaa 33659876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1017 - 1098
Target Start/End: Complemental strand, 11368765 - 11368686
Alignment:
Q  1017 ttcaaacttgtttaatgattatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    ||||| |||||| ||||||| |||  ||||  ||||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  11368765 ttcaaccttgttcaatgattctac--gtaatatcagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 11368686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1065 - 1115
Target Start/End: Complemental strand, 18894176 - 18894126
Alignment:
Q  1065 atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  18894176 atgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 18894126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1073 - 1114
Target Start/End: Complemental strand, 6675510 - 6675469
Alignment:
Q  1073 taagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  6675510 taagtttacatgaacatacttaaactgaatttaagttaacct 6675469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 3e-24; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 232 - 326
Target Start/End: Original strand, 9443966 - 9444060
Alignment:
Q  232 agaggaagtttgaatataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttga 326  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||||||  |||||||||| ||||| ||  |||||||||||||||||||||||||    
T  9443966 agaggaagcttgaatataggtgcaagcttgacatgattgttgcttccaatctcaaacttatcaggctcgcactcaagaaggtatagggttcttga 9444060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 1044 - 1114
Target Start/End: Original strand, 22847527 - 22847597
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  22847527 taaactcagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 22847597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 1038 - 1112
Target Start/End: Complemental strand, 42131289 - 42131215
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    |||||||||| ||||||||| |||||||||||||||| |||||||||||| |||||||||| ||||||| |||||    
T  42131289 tacatgtaaactcagtttaagtaggttatgtaaactacgtttacatgtacctacttaaactaaatttaagttaac 42131215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 3027020 - 3027093
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||||||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  3027020 atgtaaactaagtttaaatagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 3027093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 40430818 - 40430891
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||||||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  40430818 atgtaaactaagtttaaatagattatgtaaactaagtttacatgaacctacttaaactgaatttaatttaacct 40430891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1044 - 1114
Target Start/End: Original strand, 34159908 - 34159978
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||| ||||||||| |||||||||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  34159908 taaactcagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactaaatttaagttaacct 34159978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 50469574 - 50469648
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| | ||||||| |||||||||||||||||||||||||| || | |||||||||||||||| |||||||    
T  50469574 catgtaaactgagtttaagtaggttatgtaaactaagtttacatgaacttgcttaaactgaatttaagttaacct 50469648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 3025892 - 3025819
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  3025892 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 3025819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 10480901 - 10480828
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  10480901 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 10480828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 11691404 - 11691477
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  11691404 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 11691477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 13961960 - 13961887
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  13961960 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 13961887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 24035040 - 24035113
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  24035040 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 24035113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 32933200 - 32933273
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  32933200 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 32933273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 35339217 - 35339144
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  35339217 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 35339144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 37829445 - 37829518
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  37829445 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 37829518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 43621233 - 43621160
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  43621233 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 43621160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 48990957 - 48991030
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  48990957 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 48991030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1038 - 1114
Target Start/End: Original strand, 36852242 - 36852318
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||| | ||||||| ||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  36852242 tacatgtaaacttagtttaagtaggtcatgtaaactgagtttacatgaacctacttaaactgaatttaagttaacct 36852318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 19873763 - 19873688
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||| ||||| |||||||    
T  19873763 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttaagttaacct 19873688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 20434519 - 20434594
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  20434519 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 20434594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1044 - 1114
Target Start/End: Complemental strand, 28406125 - 28406054
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  28406125 taaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 28406054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 42349107 - 42349182
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  42349107 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 42349182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 42723822 - 42723747
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||| || ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  42723822 catgttaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 42723747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 53874726 - 53874651
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  53874726 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 53874651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 55183208 - 55183133
Alignment:
Q  1040 catgtaaattcagtttaaataggtta-tgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||  || |||||||||||||||||| |||||||    
T  55183208 catgtaaactcagtttaagtaggttaatgtaaactaagtttacattaacctacttaaactgaatttaagttaacct 55183133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1044 - 1114
Target Start/End: Original strand, 24897378 - 24897448
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||| ||||||||| || || |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  24897378 taaactcagtttaagtaagtcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 24897448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 1523373 - 1523446
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  1523373 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactaaatttaagttaacct 1523446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 20292901 - 20292828
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| |||  ||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  20292901 atgtaaactaagtttaagtagactatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 20292828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 22301348 - 22301275
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| || |||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  22301348 atgtaaactaagtttaagtaagttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 22301275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 30215383 - 30215310
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||| ||||||||||| || |||||||||||||||||| |||||||    
T  30215383 atgtaaactaagtttaagtagattatgtaaaccaagtttacatgaacttacttaaactgaatttaagttaacct 30215310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 47429315 - 47429242
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| | | |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  47429315 atgtaaactaagtttaagttgattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 47429242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1053 - 1114
Target Start/End: Complemental strand, 47467023 - 47466962
Alignment:
Q  1053 tttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  47467023 tttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 47466962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 50561901 - 50561974
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| ||||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  50561901 atgtaaactaagtttaagtagattatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 50561974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1044 - 1100
Target Start/End: Complemental strand, 51323129 - 51323072
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactga 1100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  51323129 taaattcagtttaagtaggttcatgtaaactaagtttacatgtacatacttaaactga 51323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 20434585 - 20434513
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  20434585 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 20434513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 53874660 - 53874732
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  53874660 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 53874732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 614280 - 614354
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| |||||||||| ||||||||| || |||||||||||||||||| |||||||    
T  614280 catgtaaactcagtttaagtaggttcatgtaaacta-gtttacatgaacctacttaaactgaatttaagttaacct 614354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 55220274 - 55220349
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||| ||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  55220274 catgtaaactcattttaagtaggttcatgtaaactcagtttacatgaacctacttaaactgaatttaagttaacct 55220349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1041 - 1111
Target Start/End: Original strand, 7318708 - 7318778
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaa 1111  Q
    ||||||||| ||||||| ||  |||| ||||||||||||||||| || |||||||||||||||||| ||||    
T  7318708 atgtaaattaagtttaagtatattatttaaactaagtttacatgaacctacttaaactgaatttaagttaa 7318778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1044 - 1105
Target Start/End: Complemental strand, 42349173 - 42349111
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaattta 1105  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| ||||    
T  42349173 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagttta 42349111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1009 - 1112
Target Start/End: Original strand, 7794767 - 7794869
Alignment:
Q  1009 ttaacctcttcaaacttgtttaatgattatacatgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaa 1107  Q
    ||||||||||||| |||||||||||||| |||  ||||  | | ||||| || ||  ||||||||| ||||||||||||| ||||||||||||||||||     
T  7794767 ttaacctcttcaaccttgtttaatgattctac--gtaatcttattttaagtatgtccatgtaaactcagtttacatgtacctacttaaactgaatttaag 7794864  T
Q  1108 ttaac 1112  Q
    |||||    
T  7794865 ttaac 7794869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 8713682 - 8713755
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| || |||| |||||||||||||||||  || |||||||||||||||||| |||||||    
T  8713682 atgtaaactaagtttaagtaagttacgtaaactaagtttacataaacctacttaaactgaatttaagttaacct 8713755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 32135946 - 32136019
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| || |||| |||||||||||||||||| || ||||||||||| |||||| |||||||    
T  32135946 atgtaaactaagtttaagtaagttacgtaaactaagtttacatgaacctacttaaactgtatttaagttaacct 32136019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 9443698 - 9443822
Alignment:
Q  42 tgtagtagcttcaggaagtcttatgaactccccagtgaccggattgcaaatgactaaaggggttccgttatatgggtgacacaaacaaagcaagccgttg 141  Q
    |||||||| |||||||||||||||||||||||| ||||| || ||||| || ||||  ||| ||||   | |||||| | |||||||||| || || |||    
T  9443698 tgtagtagattcaggaagtcttatgaactcccccgtgactgggttgcagatcactattgggtttccaaaagatgggtcagacaaacaaagtaaaccattg 9443797  T
Q  142 caagaatttgcaacatgaaacttat 166  Q
    ||||||||  ||| || ||||||||    
T  9443798 caagaattcacaatatcaaacttat 9443822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 28406063 - 28406135
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  28406063 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttatatgaaccta 28406135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1080
Target Start/End: Complemental strand, 35339238 - 35339202
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagttta 1080  Q
    |||||||||||||||||||||||||||||||||||||    
T  35339238 taaattcagtttaaataggttatgtaaactaagttta 35339202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1017 - 1115
Target Start/End: Original strand, 51323040 - 51323139
Alignment:
Q  1017 ttcaaacttgtttaatgattatacatgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    ||||| |||||| ||||||||||  | |||  ||||||||| || ||  ||||||||| |||||||||| || |||||||||||||||||| ||||||||    
T  51323040 ttcaaccttgttcaatgattataagtataatatcagtttaagtatgtacatgtaaacttagtttacatgaacctacttaaactgaatttaagttaaccta 51323139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 55215284 - 55215209
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||| || ||| ||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  55215284 catgttaactcaatttaagtaggttcatgtaaactcagtttacatgaacctacttaaactgaatttaagttaacct 55215209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1062 - 1112
Target Start/End: Complemental strand, 37682851 - 37682801
Alignment:
Q  1062 gttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    |||| |||||||||||||||||| || |||||||||||||||||| |||||    
T  37682851 gttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 37682801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1063 - 1113
Target Start/End: Complemental strand, 41201912 - 41201862
Alignment:
Q  1063 ttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacc 1113  Q
    |||||||||||||||||||||| || |||||||||| ||||||| ||||||    
T  41201912 ttatgtaaactaagtttacatgaacctacttaaactaaatttaagttaacc 41201862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1068 - 1114
Target Start/End: Complemental strand, 48348923 - 48348877
Alignment:
Q  1068 taaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||||||||||||| || |||||||||||||||||| |||||||    
T  48348923 taaactaagtttacatgaacctacttaaactgaatttaagttaacct 48348877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1038 - 1096
Target Start/End: Complemental strand, 48349043 - 48348985
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaa 1096  Q
    |||||||||| | ||||||| ||||||||||||||| |||||| |||||| ||||||||    
T  48349043 tacatgtaaacttagtttaagtaggttatgtaaactcagtttaaatgtacatacttaaa 48348985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1044 - 1100
Target Start/End: Original strand, 42723756 - 42723813
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactga 1100  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || ||||||||||||    
T  42723756 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactga 42723813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 614345 - 614274
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||| ||||||||| || |||||||||||| |||| || ||||||    
T  614345 taaattcagtttaagtaggttcatgtaaacta-gtttacatgaacctacttaaactgagtttacatgaaccta 614274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 55183142 - 55183214
Alignment:
Q  1044 taaattcagtttaaataggtta-tgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| ||||||| |||||||| |||||||||  || |||||||||||| |||| || ||||||    
T  55183142 taaattcagtttaagtaggttaatgtaaacttagtttacattaacctacttaaactgagtttacatgaaccta 55183214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 55220340 - 55220268
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||| ||| |||| || ||||||    
T  55220340 taaattcagtttaagtaggttcatgtaaactgagtttacatgaacctacttaaaatgagtttacatgaaccta 55220268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1049 - 1096
Target Start/End: Original strand, 11691090 - 11691137
Alignment:
Q  1049 tcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaa 1096  Q
    ||||||||| ||||| |||||||||||||||| |||||| ||||||||    
T  11691090 tcagtttaagtaggtcatgtaaactaagtttaaatgtacatacttaaa 11691137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1044 - 1114
Target Start/End: Original strand, 19873697 - 19873768
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || |||||    
T  19873697 taaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaacct 19873768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1044 - 1106
Target Start/End: Complemental strand, 24897439 - 24897377
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaa 1106  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||||    
T  24897439 taaattcagtttaagtaggttcatgtaaacttagtttacatg-acttacttaaactgagtttaa 24897377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1038 - 1101
Target Start/End: Complemental strand, 47467092 - 47467029
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaa 1101  Q
    |||||||||| | ||||||| ||||| ||||||||| ||||||  ||||| |||||||||||||    
T  47467092 tacatgtaaacttagtttaagtaggtaatgtaaactgagtttaagtgtacatacttaaactgaa 47467029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 384 - 490
Target Start/End: Original strand, 9444106 - 9444212
Alignment:
Q  384 aaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcaga 483  Q
    ||||||||||||||||||   || ||||||||| | || |||||||  | |||| ||| || |||||||||||| ||||||||  |||||| |||| |||    
T  9444106 aaagtgcaatttagcaaattgtgattctgaaatcattgttttccaaactttgcacacagatttacaaatgagaacagacttaaatggaagtcgaaggaga 9444205  T
Q  484 atttggg 490  Q
    || ||||    
T  9444206 atgtggg 9444212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1040 - 1115
Target Start/End: Complemental strand, 25858114 - 25858041
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||||||| |||||| |||||||   |||||||||| || |||||||||||| |||| || ||||||    
T  25858114 catgtaaattcagtttaagtaggttcatgtaaa---agtttacatgaacctacttaaactgagtttacatgaaccta 25858041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1040 - 1115
Target Start/End: Original strand, 25858047 - 25858120
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||| ||||||||| |||||| |||||||||   |||||||| || ||||||||||||||||| || ||||||    
T  25858047 catgtaaactcagtttaagtaggttcatgtaaact---tttacatgaacctacttaaactgaatttacatgaaccta 25858120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1048 - 1098
Target Start/End: Complemental strand, 50602003 - 50601953
Alignment:
Q  1048 ttcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||| ||||||||||||||| ||||||  ||||| ||||||||||    
T  50602003 ttcagtttaagtaggttatgtaaactgagtttaagtgtacatacttaaact 50601953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1066 - 1111
Target Start/End: Original strand, 3020164 - 3020209
Alignment:
Q  1066 tgtaaactaagtttacatgtacgtacttaaactgaatttaaattaa 1111  Q
    |||||| |||||||||||| || |||||||||||||||||| ||||    
T  3020164 tgtaaattaagtttacatgaacctacttaaactgaatttaagttaa 3020209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1065 - 1106
Target Start/End: Original strand, 7818123 - 7818164
Alignment:
Q  1065 atgtaaactaagtttacatgtacgtacttaaactgaatttaa 1106  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||    
T  7818123 atgtaaactcagtttacatatacctacttaaactgaatttaa 7818164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1044 - 1100
Target Start/End: Complemental strand, 15659095 - 15659038
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactga 1100  Q
    ||||||||| |||| |||||| |||||||||||||||||| |||  ||||||||||||    
T  15659095 taaattcagattaagtaggttcatgtaaactaagtttacacgtagatacttaaactga 15659038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1073 - 1114
Target Start/End: Original strand, 20738188 - 20738229
Alignment:
Q  1073 taagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  20738188 taagtttacatgaacctacttaaactgaatttaagttaacct 20738229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1041 - 1098
Target Start/End: Complemental strand, 51322070 - 51322013
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    ||||||| | ||||||||||||| ||||||||| ||||||  ||||| ||||||||||    
T  51322070 atgtaaacttagtttaaataggtcatgtaaactgagtttaagtgtacatacttaaact 51322013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1044 - 1096
Target Start/End: Original strand, 55215218 - 55215271
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaa 1096  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || ||||||||    
T  55215218 taaattcagtttaagtaggttcatgtaaactgagtttacatgaacctacttaaa 55215271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-22; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 232 - 490
Target Start/End: Complemental strand, 48361090 - 48360839
Alignment:
Q  232 agaggaagtttgaatataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttgatacaa 331  Q
    |||||||| ||||||||||| | |||||| ||||| || ||||||||  |||||||||||||||||||| ||||||||||||| | ||||||||| ||      
T  48361090 agaggaagcttgaatataggtgtaagcttcacatggttgttgcttccaatctcaaacttttcaggatcacactcaagaaggtacatggttcttgacactc 48360991  T
Q  332 gtttattattaaattccgagggccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatt 431  Q
     | |||      | || | || ||||||||||| || |  | ||| | | | ||||||| ||||||||||   || ||||||||| |||| ||||||| |    
T  48360990 ctctat------agtcag-ggtccgaatcatgagactaagtggtgatcgctcaaagtgcgatttagcaaattgtgattctgaaatcagtgttttccaaat 48360898  T
Q  432 tgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcagaatttggg 490  Q
    | |||| ||| || ||||||| |||||||||||||||||||||||||| ||||| ||||    
T  48360897 tttgcacacagatttacaaataagaagagacttaatgggaagttgaaggagaatgtggg 48360839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 43 - 149
Target Start/End: Original strand, 35780429 - 35780536
Alignment:
Q  43 gtagtagcttcaggaagtcttatgaactccccagtgaccggattgcaaatgactaaaggg-gttccgttatatgggtgacacaaacaaagcaagccgttg 141  Q
    |||||||||||||||||||||||||||||||| ||||| || |||||||| |||||||||  || || ||||||| | | ||||||||||||| || |||    
T  35780429 gtagtagcttcaggaagtcttatgaactcccccgtgactgggttgcaaatcactaaagggtttttcggtatatggattagacaaacaaagcaaaccattg 35780528  T
Q  142 caagaatt 149  Q
    ||||||||    
T  35780529 caagaatt 35780536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 1044 - 1114
Target Start/End: Original strand, 10594581 - 10594651
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  10594581 taaactcagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 10594651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 46924309 - 46924384
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  46924309 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 46924384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 7883491 - 7883418
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  7883491 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 7883418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 12429389 - 12429462
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  12429389 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 12429462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 25226010 - 25226083
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| ||||||||||||||||| |||| ||||||||||||||||||||| |||||||    
T  25226010 atgtaaactaagtttaagtagattatgtaaactaagttttcatgaacgtacttaaactgaatttaagttaacct 25226083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 40862950 - 40863023
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  40862950 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 40863023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 43776860 - 43776933
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  43776860 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 43776933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 47010887 - 47010960
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  47010887 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 47010960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 48613401 - 48613474
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  48613401 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 48613474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 8215341 - 8215266
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  8215341 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 8215266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 21278681 - 21278606
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  21278681 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 21278606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1051 - 1114
Target Start/End: Original strand, 29042469 - 29042532
Alignment:
Q  1051 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  29042469 agtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 29042532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 384 - 535
Target Start/End: Original strand, 35780855 - 35781006
Alignment:
Q  384 aaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcaga 483  Q
    ||||||||||||||||||    ||||||||||| | || ||| ||  || |||| ||||||||||||||||||||||| || |||||||||||||||| |    
T  35780855 aaagtgcaatttagcaaattgcggttctgaaatcattgtttttcagattatgcacacacatctacaaatgagaagagattttatgggaagttgaagcaaa 35780954  T
Q  484 atttgggtgatgagtggttcaggaagattatcaaaatatggataaagctcat 535  Q
    || |||| | ||||  |    ||||||||||||||||| || ||||| ||||    
T  35780955 atgtgggcggtgaggtgggatggaagattatcaaaataagggtaaaggtcat 35781006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1041 - 1112
Target Start/End: Complemental strand, 36688311 - 36688240
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  36688311 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 36688240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 43246655 - 43246580
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| | ||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  43246655 catgtaaacttagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 43246580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1041 - 1112
Target Start/End: Complemental strand, 43501813 - 43501742
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  43501813 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 43501742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 47065563 - 47065488
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||| ||||| |||||||    
T  47065563 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttaagttaacct 47065488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1042 - 1112
Target Start/End: Complemental strand, 42436026 - 42435956
Alignment:
Q  1042 tgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    |||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  42436026 tgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 42435956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 48874048 - 48873974
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||  ||||||| ||| |||||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  48874048 catgtaaatcgagtttaagtagattatgtaaactaagtttacatgaacctacttaaactaaatttaagttaacct 48873974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 12847045 - 12846972
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | |||| || ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  12847045 atgtaaactaagttgaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 12846972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 40305191 - 40305118
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| ||||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  40305191 atgtaaactaagtttaagtagattatgtaaactgagtttacatgcacctacttaaactgaatttaagttaacct 40305118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 44709590 - 44709517
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || || ||||||||||||||| |||||||    
T  44709590 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctatttaaactgaatttaagttaacct 44709517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 45869885 - 45869812
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| ||||||||||||||||| |||| || |||||||||||||||||| |||||||    
T  45869885 atgtaaactaagtttaagtagattatgtaaactaagttttcatgaacttacttaaactgaatttaagttaacct 45869812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 46102267 - 46102340
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| ||||||||||||||||| |||| || |||||||||||||||||| |||||||    
T  46102267 atgtaaactaagtttaagtagattatgtaaactaagttttcatgaacctacttaaactgaatttaagttaacct 46102340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 8215275 - 8215347
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  8215275 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 8215347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 21278615 - 21278687
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  21278615 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 21278687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 26015448 - 26015520
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  26015448 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 26015520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 35924603 - 35924531
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||| |||| || ||||||    
T  35924603 taaattcagtttaagtatgttcatgtaaactaagtttacatgtacctacttaaactgagtttacataaaccta 35924531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1051 - 1114
Target Start/End: Original strand, 19474771 - 19474834
Alignment:
Q  1051 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| || |||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  19474771 agtttaagtaagttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 19474834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1106
Target Start/End: Complemental strand, 26015514 - 26015447
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaa 1106  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  26015514 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaa 26015447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1041 - 1112
Target Start/End: Complemental strand, 39597341 - 39597270
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    ||||||| | |||| || ||| |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  39597341 atgtaaactaagttaaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 39597270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1051 - 1114
Target Start/End: Original strand, 47540876 - 47540939
Alignment:
Q  1051 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| ||| |||||||||||||||||||||| || ||||||||||| |||||| |||||||    
T  47540876 agtttaagtagattatgtaaactaagtttacatgaacctacttaaactgtatttaagttaacct 47540939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1049 - 1114
Target Start/End: Complemental strand, 32541799 - 32541733
Alignment:
Q  1049 tcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  32541799 tcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 32541733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 35924538 - 35924612
Alignment:
Q  1041 atgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| ||||||||| |||||  ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  35924538 atgtaaactcagtttaagtaggtacatgtaaacttagtttacatgaacatacttaaactgaatttaagttaacct 35924612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 20493266 - 20493339
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||| ||||||||| || |||||||| ||||||||| |||||||    
T  20493266 atgtaaactaagtttaagtagattatgtaaactatgtttacatgaacctacttaaattgaatttaagttaacct 20493339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1044 - 1100
Target Start/End: Original strand, 32541742 - 32541799
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactga 1100  Q
    |||||||||||||| |||||| |||||||||||||||||||| || ||||||||||||    
T  32541742 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactga 32541799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 40995660 - 40995588
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||||||||||| || || |||||||||||| |||| || ||||||    
T  40995660 taaattcagtttaagtaggttcatgtaaactaagtttacgtgaacctacttaaactgagtttagatgaaccta 40995588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 46924375 - 46924303
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  46924375 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 46924303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1044 - 1114
Target Start/End: Original strand, 40995598 - 40995669
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||| ||||||||| |||||| | ||||||| |||||||||| || |||||||||||||||||| |||||||    
T  40995598 taaactcagtttaagtaggttcacgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 40995669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1040 - 1085
Target Start/End: Complemental strand, 21874185 - 21874139
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgt 1085  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  21874185 catgtaaactcagtttaaataggttcatgtaaactaagtttacatgt 21874139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1041 - 1103
Target Start/End: Original strand, 24981421 - 24981483
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatt 1103  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || ||||||| |||||||    
T  24981421 atgtaaactaagtttaagtagcttatgtaaactaagtttacatgaacctacttaacctgaatt 24981483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 326
Target Start/End: Original strand, 35780705 - 35780803
Alignment:
Q  228 acgaagaggaagtttgaatataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttga 326  Q
    |||||||||||| || ||||| ||  ||||||| ||| |||| || |||||   ||||||||||||||| ||| ||||||||||||  |||||||||||    
T  35780705 acgaagaggaagcttaaatatggggtcaagcttcacaagattgttccttccaaactcaaacttttcaggctcacactcaagaaggtgcagggttcttga 35780803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1017 - 1098
Target Start/End: Original strand, 43776506 - 43776585
Alignment:
Q  1017 ttcaaacttgtttaatgattatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||||| ||||||| |||  ||||  ||||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  43776506 ttcaaacttgttcaatgattctac--gtaatatcagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 43776585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 166
Target Start/End: Complemental strand, 48361355 - 48361234
Alignment:
Q  45 agtagcttcaggaagtcttatgaactccccagtgaccggattgcaaatgactaaaggggttccgttatatgggtgacacaaacaaagcaagccgttgcaa 144  Q
    ||||| |||||||||||||||||||||||| ||||| || ||||| || ||||| ||| ||||   | |||| | | |||||||||| || || ||||||    
T  48361355 agtagattcaggaagtcttatgaactcccctgtgactgggttgcagatcactaacgggtttcccaaagatggatcagacaaacaaagtaaaccattgcaa 48361256  T
Q  145 gaatttgcaacatgaaacttat 166  Q
    |||||  ||| || ||||||||    
T  48361255 gaattcacaatatcaaacttat 48361234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1038 - 1106
Target Start/End: Complemental strand, 7883567 - 7883499
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaa 1106  Q
    |||||||||||| ||||||| ||||| ||||||||| ||||||  || || |||||||||| |||||||    
T  7883567 tacatgtaaatttagtttaagtaggtcatgtaaactgagtttaagtggacatacttaaactcaatttaa 7883499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1040 - 1080
Target Start/End: Original strand, 25225985 - 25226025
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagttta 1080  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  25225985 catgtaaattgagtttaagtaggttatgtaaactaagttta 25226025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 25877212 - 25877285
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||  | |||||||||| || |||||||||||||||||| |||||||    
T  25877212 catgtaaactcagtttaagtaggttcatgtaa--ttagtttacatgaacctacttaaactgaatttaagttaacct 25877285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1063 - 1115
Target Start/End: Original strand, 32661966 - 32662018
Alignment:
Q  1063 ttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  32661966 ttatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 32662018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 43246589 - 43246661
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||| | |||| || ||||||    
T  43246589 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactaagtttacatgaaccta 43246661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 47065497 - 47065569
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  47065497 taaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 47065569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1041 - 1104
Target Start/End: Complemental strand, 41469846 - 41469783
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaattt 1104  Q
    ||||||| ||||||||  || ||| ||||||||||||||||||| || |||||||||| |||||    
T  41469846 atgtaaactcagtttatgtaagttttgtaaactaagtttacatgaacctacttaaacttaattt 41469783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 42095179 - 42095104
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||| ||||| |||| | ||||||||| | |||||||| || |||||||||||||||||| |||||||    
T  42095179 catgtaaactcaatttaagtaggctcatgtaaactcaatttacatgaacctacttaaactgaatttaagttaacct 42095104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 955 - 993
Target Start/End: Complemental strand, 25066646 - 25066608
Alignment:
Q  955 gaatttttctagttacatcctatttaattctttttacac 993  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  25066646 gaatttttctagttacaccctatttaattcttgttacac 25066608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1073 - 1114
Target Start/End: Original strand, 7900907 - 7900948
Alignment:
Q  1073 taagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  7900907 taagtttacatgaacctacttaaactgaatttaagttaacct 7900948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1049 - 1098
Target Start/End: Original strand, 21202623 - 21202672
Alignment:
Q  1049 tcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    ||||||||| ||||||||||||||| ||||||  ||||| ||||||||||    
T  21202623 tcagtttaagtaggttatgtaaactgagtttaagtgtacatacttaaact 21202672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 25877276 - 25877206
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||  ||||||| || |||||||||||| |||| || ||||||    
T  25877276 taaattcagtttaagtaggttcatgtaaactaa--ttacatgaacctacttaaactgagtttacatgaaccta 25877206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1073 - 1114
Target Start/End: Complemental strand, 46321702 - 46321661
Alignment:
Q  1073 taagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  46321702 taagtttacatgaacctacttaaactgaatttaagttaacct 46321661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1024 - 1080
Target Start/End: Original strand, 48613362 - 48613416
Alignment:
Q  1024 ttgtttaatgattatacatgtaaattcagtttaaataggttatgtaaactaagttta 1080  Q
    ||||| |||||||||||  ||||  ||||||||| ||||||||||||||||||||||    
T  48613362 ttgttcaatgattatac--gtaatatcagtttaagtaggttatgtaaactaagttta 48613416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 1e-19; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 1044 - 1114
Target Start/End: Complemental strand, 2612827 - 2612757
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  2612827 taaactcagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 2612757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 48585200 - 48585273
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  48585200 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacgtacttaaactgaatttaagttaacct 48585273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1038 - 1114
Target Start/End: Original strand, 31608039 - 31608115
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||| | ||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||| |||||||    
T  31608039 tacatgtaaacttagtttaagtgggttatgtaaactaagtttacatgtacctacctaaactgaatttaagttaacct 31608115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 10841073 - 10840998
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  10841073 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 10840998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 38871532 - 38871607
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  38871532 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 38871607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 30419255 - 30419329
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||  ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  30419255 catgtaaatcgagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 30419329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1044 - 1114
Target Start/End: Complemental strand, 44353898 - 44353828
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||| ||||||||| ||||||||||||| |||||||||||| || |||||||||||||||||| |||||||    
T  44353898 taaactcagtttaagtaggttatgtaaattaagtttacatgaacctacttaaactgaatttaagttaacct 44353828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 7680734 - 7680661
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  7680734 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 7680661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 38144746 - 38144673
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  38144746 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 38144673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 52813522 - 52813595
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  52813522 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 52813595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1040 - 1112
Target Start/End: Original strand, 33392974 - 33393046
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    |||||||| | ||||||| ||||||| |||||||||||||||||| || |||||||||||||||||| |||||    
T  33392974 catgtaaactaagtttaagtaggttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 33393046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 4044456 - 4044381
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  4044456 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 4044381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 7149647 - 7149572
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||| |||||||||||| || |||||||||||||||||| |||||||    
T  7149647 catgtaaactcagtttaagtaggttcatgtaaattaagtttacatgaacctacttaaactgaatttaagttaacct 7149572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1051 - 1114
Target Start/End: Original strand, 24200068 - 24200131
Alignment:
Q  1051 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  24200068 agtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 24200131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 36430723 - 36430798
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  36430723 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 36430798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 37971354 - 37971279
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  37971354 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 37971279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 41070291 - 41070366
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  41070291 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 41070366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 4515684 - 4515610
Alignment:
Q  1041 atgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  4515684 atgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 4515610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1041 - 1107
Target Start/End: Original strand, 11124449 - 11124515
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaa 1107  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||    
T  11124449 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaaa 11124515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1059 - 1112
Target Start/End: Complemental strand, 18168188 - 18168135
Alignment:
Q  1059 taggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||| |||||    
T  18168188 taggttatataaactaagtttacatgtacctacttaaactgaatttaagttaac 18168135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 35155283 - 35155210
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| | |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  35155283 atgtaaactaagtttaagtagataatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 35155210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 35233247 - 35233174
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||| ||||||||| |||||||    
T  35233247 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaattgaatttaagttaacct 35233174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 41589267 - 41589340
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| || |||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  41589267 atgtaaactaagtttaagtaagttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 41589340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 49779377 - 49779304
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || || ||||||||||||||| |||||||    
T  49779377 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctatttaaactgaatttaagttaacct 49779304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 4044390 - 4044462
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  4044390 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 4044462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 4515619 - 4515691
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  4515619 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacataaaccta 4515691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 33712364 - 33712288
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaact-aagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| ||||||||||| || |||||||||||||||||| |||||||    
T  33712364 catgtaaactcagtttaagtaggttcatgtaaacttaagtttacatgaacctacttaaactgaatttaagttaacct 33712288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 36430789 - 36430717
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  36430789 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 36430717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 37971288 - 37971360
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  37971288 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 37971360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 41070357 - 41070285
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  41070357 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 41070285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 7153246 - 7153171
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| || ||| |||||||||||||||||||  || |||||||||||||||||| |||||||    
T  7153246 catgtaaactcagtttaagtaagtttatgtaaactaagtttacataaacttacttaaactgaatttaagttaacct 7153171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 10999432 - 10999357
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||||||||| |||||| ||||||||| ||||||| || || |||||||||| ||||||| |||||||    
T  10999432 catgtaaattcagtttaagtaggttcatgtaaacttagtttacgtgaacctacttaaacttaatttaagttaacct 10999357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1041 - 1112
Target Start/End: Complemental strand, 36840229 - 36840158
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    ||||||| | ||||||| ||  |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  36840229 atgtaaactaagtttaagtaaattatgtaaactaagtttacatgaacatacttaaactgaatttaagttaac 36840158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1041 - 1111
Target Start/End: Original strand, 19942154 - 19942224
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaa 1111  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||| ||||||||| ||||    
T  19942154 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaattgaatttaagttaa 19942224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 10841007 - 10841079
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  10841007 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 10841079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 10999366 - 10999438
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||| ||||||| |||||| | |||||||||||||||||| || ||||||||||||||||| || ||||||    
T  10999366 taaattaagtttaagtaggttcacgtaaactaagtttacatgaacctacttaaactgaatttacatgaaccta 10999438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 38871598 - 38871526
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  38871598 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 38871526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1038 - 1114
Target Start/End: Complemental strand, 47097895 - 47097819
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||| |||| | ||||||| ||| | |||||||||||||||||||| || |||||||||||||||||  |||||||    
T  47097895 tacatataaacttagtttaagtagatcatgtaaactaagtttacatgaacctacttaaactgaatttatgttaacct 47097819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 53974689 - 53974764
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||| || ||| ||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  53974689 catgttaactcaatttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 53974764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1069 - 1114
Target Start/End: Complemental strand, 20656904 - 20656859
Alignment:
Q  1069 aaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||||||| || |||||||||||||||||| |||||||    
T  20656904 aaactaagtttacatgaacctacttaaactgaatttaagttaacct 20656859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1069 - 1114
Target Start/End: Original strand, 32236737 - 32236782
Alignment:
Q  1069 aaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||||||| || |||||||||||||||||| |||||||    
T  32236737 aaactaagtttacatgaacctacttaaactgaatttaagttaacct 32236782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 33712297 - 33712370
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaact-aagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| ||||||||||| || |||||||||||| |||| || ||||||    
T  33712297 taaattcagtttaagtaggttcatgtaaacttaagtttacatgaacctacttaaactgagtttacatgaaccta 33712370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1044 - 1096
Target Start/End: Complemental strand, 53974755 - 53974702
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaa 1096  Q
    |||||||||||||| |||||| |||||||||||||||||||| || ||||||||    
T  53974755 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaa 53974702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 7149581 - 7149653
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| | |||||||| || |||||||||||| |||| || ||||||    
T  7149581 taaattcagtttaagtaggttcatgtaaacttaatttacatgaacctacttaaactgagtttacatgaaccta 7149653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1038 - 1098
Target Start/End: Complemental strand, 36232416 - 36232356
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  36232416 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 36232356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1038 - 1098
Target Start/End: Complemental strand, 38145047 - 38144987
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  38145047 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 38144987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1068 - 1115
Target Start/End: Original strand, 10999441 - 10999488
Alignment:
Q  1068 taaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    ||||||||||||||||| || ||||||||||||||||| || ||||||    
T  10999441 taaactaagtttacatgaacctacttaaactgaatttacatgaaccta 10999488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1098
Target Start/End: Complemental strand, 2613131 - 2613069
Alignment:
Q  1036 tatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||||| | | ||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  2613131 tatacatgtaaacttattttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 2613069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1040 - 1106
Target Start/End: Complemental strand, 36841063 - 36840997
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaa 1106  Q
    |||||||| | ||||| ||||||| ||||||||| ||||||  ||||| |||||||||||| |||||    
T  36841063 catgtaaacttagtttcaataggtcatgtaaactgagtttaagtgtacatacttaaactgagtttaa 36840997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1038 - 1080
Target Start/End: Original strand, 41589240 - 41589282
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagttta 1080  Q
    |||||||||| | ||||||| ||||||||||||||||||||||    
T  41589240 tacatgtaaacttagtttaagtaggttatgtaaactaagttta 41589282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1073 - 1114
Target Start/End: Complemental strand, 22781455 - 22781414
Alignment:
Q  1073 taagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  22781455 taagtttacatgaacctacttaaactgaatttaagttaacct 22781414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1064 - 1105
Target Start/End: Original strand, 39626454 - 39626495
Alignment:
Q  1064 tatgtaaactaagtttacatgtacgtacttaaactgaattta 1105  Q
    ||||||||||||||||||||| || |||||||||||| ||||    
T  39626454 tatgtaaactaagtttacatgaacctacttaaactgagttta 39626495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 1e-19; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 1044 - 1114
Target Start/End: Original strand, 35274347 - 35274417
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  35274347 taaactcagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 35274417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1050 - 1114
Target Start/End: Original strand, 40499059 - 40499123
Alignment:
Q  1050 cagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  40499059 cagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 40499123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 40400431 - 40400506
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  40400431 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 40400506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 52044081 - 52044006
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  52044081 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 52044006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 32086993 - 32087067
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| | ||||||| |||||||||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  32086993 catgtaaacttagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactaaatttaagttaacct 32087067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1044 - 1114
Target Start/End: Complemental strand, 32117636 - 32117566
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||| ||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  32117636 taaactcagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 32117566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 1441825 - 1441898
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| |||||| ||||||||||||||||||| || |||||||||||||||||| |||||||    
T  1441825 atgtaaactaagtttaagtaggttgtgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 1441898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 6016180 - 6016107
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  6016180 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 6016107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 12602420 - 12602493
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||||| ||||||| ||  |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  12602420 atgtaaattaagtttaagtaaattatgtaaactaagtttacatgaacttacttaaactgaatttaagttaacct 12602493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 23443862 - 23443789
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  23443862 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 23443789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 26308084 - 26308157
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  26308084 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 26308157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 29921453 - 29921380
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  29921453 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 29921380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 32561932 - 32562005
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  32561932 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 32562005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 48933796 - 48933869
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  48933796 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 48933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 51001598 - 51001525
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  51001598 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 51001525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1044 - 1112
Target Start/End: Original strand, 41713351 - 41713419
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    |||| ||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||| |||||    
T  41713351 taaactcagtttaagtaggttatgtaaactaagtttaaatgaacctacttaaactgaatttaagttaac 41713419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 13235007 - 13234932
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||| |||||||||||| || |||||||||||||||||| |||||||    
T  13235007 catgtaaactcagtttaagtaggttcatgtaaattaagtttacatgaacctacttaaactgaatttaagttaacct 13234932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1024 - 1114
Target Start/End: Complemental strand, 19247481 - 19247393
Alignment:
Q  1024 ttgtttaatgattatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||| |||||||||||  ||||  ||||||||| ||||| ||||||||| ||||||  ||||| ||||||||||||||||||||||||||    
T  19247481 ttgttcaatgattatac--gtaatatcagtttaagtaggtcatgtaaactgagtttaagtgtacatacttaaactgaatttaaattaacct 19247393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 24317586 - 24317661
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  24317586 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 24317661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1111
Target Start/End: Complemental strand, 24663903 - 24663832
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaa 1111  Q
    |||||||| |||||||||||| |||||||||||||| |||||||| || || ||||||||||||||| ||||    
T  24663903 catgtaaactcagtttaaataagttatgtaaactaaatttacatgaacctatttaaactgaatttaagttaa 24663832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 34270450 - 34270375
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  34270450 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 34270375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1044 - 1114
Target Start/End: Original strand, 5673382 - 5673452
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||| ||||||||| ||| |||||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  5673382 taaactcagtttaagtagattatgtaaactaagtttacatgaacctacttaaactaaatttaagttaacct 5673452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 7009490 - 7009563
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| || |||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  7009490 atgtaaactaagtttaagtaagttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 7009563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 8113439 - 8113366
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| ||  ||||||||||||||||| |||||||    
T  8113439 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaaccaacttaaactgaatttaagttaacct 8113366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1053 - 1114
Target Start/End: Complemental strand, 9640226 - 9640165
Alignment:
Q  1053 tttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  9640226 tttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 9640165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1053 - 1114
Target Start/End: Original strand, 13073632 - 13073693
Alignment:
Q  1053 tttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  13073632 tttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 13073693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 19513782 - 19513709
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| ||||||||| |||||||||||| || |||||||||||||||||| |||||||    
T  19513782 atgtaaactaagtttaagtagattatgtaaattaagtttacatgaacctacttaaactgaatttaagttaacct 19513709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 45941945 - 45942018
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || ||||||| |||||||||| |||||||    
T  45941945 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaatctgaatttaagttaacct 45942018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 24317652 - 24317580
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  24317652 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 24317580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 34270384 - 34270456
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  34270384 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 34270456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 13236868 - 13236793
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| || ||| |||||||||||||||||||  || |||||||||||||||||| |||||||    
T  13236868 catgtaaactcagtttaagtaagtttatgtaaactaagtttacataaacttacttaaactgaatttaagttaacct 13236793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1059 - 1114
Target Start/End: Complemental strand, 14289843 - 14289788
Alignment:
Q  1059 taggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||    
T  14289843 taggttatgtaaactaagtttacatgaaccaacttaaactgaatttaagttaacct 14289788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 42948597 - 42948672
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| | ||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  42948597 catgtaaacttagtttaagtaggtttatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 42948672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1063 - 1114
Target Start/End: Complemental strand, 46291266 - 46291215
Alignment:
Q  1063 ttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  46291266 ttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 46291215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1052 - 1114
Target Start/End: Original strand, 1702327 - 1702389
Alignment:
Q  1052 gtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||| ||| |||||||||||| ||||||||| || |||||||||||||||||| |||||||    
T  1702327 gtttaagtagattatgtaaactatgtttacatgaacctacttaaactgaatttaagttaacct 1702389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1065 - 1114
Target Start/End: Complemental strand, 40536308 - 40536259
Alignment:
Q  1065 atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  40536308 atgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 40536259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1042 - 1114
Target Start/End: Original strand, 52025059 - 52025132
Alignment:
Q  1042 tgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||| ||||| |||||||    
T  52025059 tgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttaatttaacct 52025132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1038 - 1114
Target Start/End: Original strand, 17702504 - 17702580
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||| | ||||||| ||||| ||||||||| ||||||  |||||  ||||||||||||||||| |||||||    
T  17702504 tacatgtaaacttagtttaagtaggtcatgtaaactgagtttaagtgtacacacttaaactgaatttaagttaacct 17702580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 40400497 - 40400425
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  40400497 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 40400425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 52044015 - 52044087
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  52044015 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 52044087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1051 - 1101
Target Start/End: Original strand, 17474912 - 17474962
Alignment:
Q  1051 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaa 1101  Q
    ||||||| ||| |||||||||||||||||||||| || |||||||||||||    
T  17474912 agtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaa 17474962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1038 - 1080
Target Start/End: Original strand, 32561905 - 32561947
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagttta 1080  Q
    |||||||||| ||||||||| ||||||||||||||||||||||    
T  32561905 tacatgtaaactcagtttaagtaggttatgtaaactaagttta 32561947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1044 - 1105
Target Start/End: Complemental strand, 52025123 - 52025061
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaattta 1105  Q
    |||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||| ||||    
T  52025123 taaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagttta 52025061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 3486205 - 3486278
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| ||| ||||||||| |||| ||| || |||||||||||||||||| |||||||    
T  3486205 atgtaaactaagtttaagtagattacgtaaactaaatttagatgaacctacttaaactgaatttaagttaacct 3486278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1044 - 1105
Target Start/End: Complemental strand, 18909647 - 18909586
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaattta 1105  Q
    |||| ||||||||| ||||||||||||||| |||||||||| || |||||||| ||| ||||    
T  18909647 taaactcagtttaagtaggttatgtaaacttagtttacatgaacctacttaaaatgagttta 18909586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 24527315 - 24527242
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | || |||| || |||| |||||||||||||||||| || |||||||||| ||||||| |||||||    
T  24527315 atgtaaactaagattaagtaagttacgtaaactaagtttacatgaacctacttaaactaaatttaagttaacct 24527242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1041 - 1098
Target Start/End: Complemental strand, 24664151 - 24664094
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    ||||||||| ||||||||||||| ||||||||| ||||||  ||||| ||||||||||    
T  24664151 atgtaaatttagtttaaataggtcatgtaaacttagtttaagtgtacatacttaaact 24664094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1044 - 1096
Target Start/End: Original strand, 51676834 - 51676887
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaa 1096  Q
    |||||||||||||| |||||| |||||||||||||||||||| || ||||||||    
T  51676834 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaa 51676887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1038 - 1098
Target Start/End: Original strand, 1441701 - 1441761
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  1441701 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 1441761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1044 - 1080
Target Start/End: Complemental strand, 6016201 - 6016165
Alignment:
Q  1044 taaattcagtttaaataggttatgtaaactaagttta 1080  Q
    |||| ||||||||||||||||||||||||||||||||    
T  6016201 taaactcagtttaaataggttatgtaaactaagttta 6016165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1038 - 1098
Target Start/End: Complemental strand, 8113515 - 8113455
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||| | ||||||||||||| ||||||||| ||||||  ||||| ||||||||||    
T  8113515 tacatgtaaacttagtttaaataggtcatgtaaactgagtttaagtgtacatacttaaact 8113455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 13234941 - 13235013
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| | |||||||| || |||||||||||| |||| || ||||||    
T  13234941 taaattcagtttaagtaggttcatgtaaacttaatttacatgaacctacttaaactgagtttacatgaaccta 13235013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1038 - 1098
Target Start/End: Complemental strand, 29921778 - 29921718
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  29921778 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 29921718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 42948663 - 42948591
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||  || |||||||||| | |||| || ||||||    
T  42948663 taaattcagtttaagtaggttcatgtaaactaagtttacataaacctacttaaactaagtttacatgaaccta 42948591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1040 - 1111
Target Start/End: Complemental strand, 51676900 - 51676828
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaa 1111  Q
    ||||| || ||| ||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| ||||    
T  51676900 catgttaactcaatttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaa 51676828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 18909582 - 18909656
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||| ||||| |||||| |||||||||||||||||||  || |||||||||||| ||||| |||||||    
T  18909582 catgtaaactcattttaagtaggttcatgtaaactaagtttacat-aacctacttaaactgagtttaagttaacct 18909656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 11173038 - 11172961
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaact--aagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||| ||||| |||||| |||||||||  ||||||||||| || |||||||| ||||||||| |||||||    
T  11173038 catgtaaactcaatttaagtaggttcatgtaaacttaaagtttacatgaacctacttaaattgaatttaagttaacct 11172961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1106
Target Start/End: Complemental strand, 14290090 - 14290020
Alignment:
Q  1036 tatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaa 1106  Q
    |||| ||||||| | | ||||| ||||| ||||||||||||||||  ||||| |||||||||| |||||||    
T  14290090 tatatatgtaaacttattttaagtaggtcatgtaaactaagtttaagtgtacatacttaaactcaatttaa 14290020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1098
Target Start/End: Complemental strand, 19247574 - 19247512
Alignment:
Q  1036 tatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||||| | ||||| |||| || ||||||||||||||||  ||||| ||||||||||    
T  19247574 tatacatgtaaacttagtttcaataagtcatgtaaactaagtttaagtgtacatacttaaact 19247512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1068 - 1114
Target Start/End: Complemental strand, 20582014 - 20581968
Alignment:
Q  1068 taaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||| |||||||||| || |||||||||||||||||| |||||||    
T  20582014 taaactgagtttacatgaacatacttaaactgaatttaagttaacct 20581968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1098
Target Start/End: Complemental strand, 32117693 - 32117631
Alignment:
Q  1036 tatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||||| | ||||||| ||||| ||||||||| ||||||  ||||| ||||||||||    
T  32117693 tatacatgtaaacttagtttaagtaggtcatgtaaactgagtttaagtgtacatacttaaact 32117631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1040 - 1115
Target Start/End: Original strand, 49823584 - 49823657
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||| ||||||||| |||||| |||||||||   |||||||| || ||||||||||||||||| || ||||||    
T  49823584 catgtaaactcagtttaagtaggttcatgtaaact---tttacatgaacctacttaaactgaatttacatgaaccta 49823657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1073 - 1114
Target Start/End: Complemental strand, 39569029 - 39568988
Alignment:
Q  1073 taagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  39569029 taagtttacatgaacctacttaaactgaatttaagttaacct 39568988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1073 - 1114
Target Start/End: Original strand, 39982811 - 39982852
Alignment:
Q  1073 taagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  39982811 taagtttacatgaacctacttaaactgaatttaagttaacct 39982852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1073 - 1114
Target Start/End: Original strand, 44722345 - 44722386
Alignment:
Q  1073 taagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  44722345 taagtttacatgaacctacttaaactgaatttaagttaacct 44722386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 6e-19; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 31640118 - 31640045
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  31640118 atgtaaacttagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 31640045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1052 - 1112
Target Start/End: Complemental strand, 13480041 - 13479981
Alignment:
Q  1052 gtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  13480041 gtttaaataggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 13479981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 10554534 - 10554460
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| | ||||||| ||||||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  10554534 catgtaaactaagtttaagtaggttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 10554460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 44799163 - 44799237
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| | ||||||| ||||||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  44799163 catgtaaactaagtttaagtaggttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 44799237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 7722120 - 7722047
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  7722120 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 7722047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 26171611 - 26171684
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  26171611 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 26171684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 38628654 - 38628581
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  38628654 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 38628581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1041 - 1112
Target Start/End: Original strand, 10522121 - 10522192
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  10522121 atgtaaactaagtttaactagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 10522192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 13195866 - 13195791
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  13195866 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 13195791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 34202711 - 34202786
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  34202711 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 34202786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 40811401 - 40811326
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  40811401 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 40811326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1041 - 1112
Target Start/End: Complemental strand, 44456428 - 44456357
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  44456428 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 44456357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 45443232 - 45443158
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| | ||||||| ||||||| ||||||| |||||||||| || |||||||||||||||||| |||||||    
T  45443232 catgtaaactaagtttaagtaggttacgtaaactgagtttacatgaacctacttaaactgaatttaagttaacct 45443158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1042 - 1114
Target Start/End: Original strand, 1520635 - 1520708
Alignment:
Q  1042 tgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  1520635 tgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacttacttaaactgaatttaagttaacct 1520708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1053 - 1114
Target Start/End: Complemental strand, 4072964 - 4072903
Alignment:
Q  1053 tttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  4072964 tttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 4072903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 4331119 - 4331046
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || || ||||||||||||||| |||||||    
T  4331119 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacttagttaaactgaatttaagttaacct 4331046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 16313207 - 16313134
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||  |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  16313207 atgtaaactaagtttaagtatattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 16313134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 40658871 - 40658798
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| || |||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  40658871 atgtaaactaagtttaagtaagttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 40658798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 13195800 - 13195872
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  13195800 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 13195872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 34202777 - 34202705
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  34202777 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 34202705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 40811335 - 40811407
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  40811335 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 40811407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1041 - 1112
Target Start/End: Complemental strand, 8034343 - 8034272
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || ||||||||||| |||||| |||||    
T  8034343 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgtatttaatttaac 8034272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1044 - 1105
Target Start/End: Complemental strand, 1520699 - 1520637
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaattta 1105  Q
    |||||||||||||| || ||| |||||||||||||||||||| || |||||||||||| ||||    
T  1520699 taaattcagtttaagtaagttcatgtaaactaagtttacatgaacctacttaaactgagttta 1520637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 458115 - 458043
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||| | ||| || |||||||||||||||||| |||||||    
T  458115 atgtaaactaagtttaagtagattatgtaaactaagtt-atatgaacatacttaaactgaatttaagttaacct 458043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1069 - 1114
Target Start/End: Complemental strand, 31569244 - 31569199
Alignment:
Q  1069 aaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||||||| || |||||||||||||||||| |||||||    
T  31569244 aaactaagtttacatgaacctacttaaactgaatttaagttaacct 31569199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1038 - 1098
Target Start/End: Complemental strand, 4073297 - 4073237
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||| | | ||||| ||||||||||||||||||||||  ||||| ||||||||||    
T  4073297 tacatgtaaacttattttaagtaggttatgtaaactaagtttaagtgtacatacttaaact 4073237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1038 - 1098
Target Start/End: Complemental strand, 4331452 - 4331392
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  4331452 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 4331392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1038 - 1098
Target Start/End: Complemental strand, 38628955 - 38628895
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  38628955 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 38628895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1098
Target Start/End: Complemental strand, 13480106 - 13480044
Alignment:
Q  1036 tatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||||| | ||||||| ||||| ||||||||| ||||||  ||||| ||||||||||    
T  13480106 tatacatgtaaacttagtttaagtaggtcatgtaaactgagtttaagtgtacatacttaaact 13480044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1068 - 1114
Target Start/End: Complemental strand, 25853036 - 25852990
Alignment:
Q  1068 taaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||| |||||||||| || |||||||||||||||||| |||||||    
T  25853036 taaactgagtttacatgaacctacttaaactgaatttaagttaacct 25852990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1073 - 1114
Target Start/End: Complemental strand, 2390312 - 2390271
Alignment:
Q  1073 taagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  2390312 taagtttacatgaacctacttaaactgaatttaagttaacct 2390271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1073 - 1114
Target Start/End: Original strand, 21658361 - 21658402
Alignment:
Q  1073 taagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  21658361 taagtttacatgaacctacttaaactgaatttaagttaacct 21658402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1073 - 1114
Target Start/End: Original strand, 42343402 - 42343443
Alignment:
Q  1073 taagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  42343402 taagtttacatgaacctacttaaactgaatttaagttaacct 42343443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 44143819 - 44143891
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||| || ||||||||| |||||| |||||||   |||||||||| || |||||||||||||||||| |||||||    
T  44143819 catgttaactcagtttaagtaggttcatgtaaa---agtttacatgaacctacttaaactgaatttaagttaacct 44143891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 2e-18; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1036 - 1112
Target Start/End: Original strand, 44953449 - 44953525
Alignment:
Q  1036 tatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    |||| ||||||| ||| |||||||| ||||||||||| |||||||||||||| |||||||||||||||||| |||||    
T  44953449 tatagatgtaaactcaatttaaatatgttatgtaaacaaagtttacatgtacctacttaaactgaatttaagttaac 44953525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 3032610 - 3032535
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  3032610 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 3032535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 3136910 - 3136835
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  3136910 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 3136835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 24822400 - 24822325
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  24822400 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 24822325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 4006283 - 4006356
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  4006283 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 4006356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 38234952 - 38235025
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  38234952 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 38235025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 44026111 - 44026184
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  44026111 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 44026184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1051 - 1114
Target Start/End: Complemental strand, 5347136 - 5347073
Alignment:
Q  1051 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| ||||||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  5347136 agtttaagtaggttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 5347073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 15840200 - 15840275
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  15840200 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 15840275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1051 - 1114
Target Start/End: Complemental strand, 38459610 - 38459547
Alignment:
Q  1051 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  38459610 agtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 38459547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1040 - 1113
Target Start/End: Complemental strand, 2827870 - 2827797
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacc 1113  Q
    |||||||| ||||||||| ||||||||| |||||||||||||||| || | |||||||| ||||||| ||||||    
T  2827870 catgtaaactcagtttaagtaggttatgaaaactaagtttacatgaacctgcttaaacttaatttaagttaacc 2827797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 31793319 - 31793246
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | |||| || ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  31793319 atgtaaactaagttgaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 31793246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 33771805 - 33771878
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  33771805 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactaaatttaagttaacct 33771878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 39713113 - 39713186
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| || |||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  39713113 atgtaaactaagtttaagtaagttacgtaaactaagtttacatgaacatacttaaactgaatttaagttaacct 39713186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 42687463 - 42687390
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || ||||||||| |||||||| |||||||    
T  42687463 atgtaaagtaagtttaagtagattatgtaaactaagtttacatgaacttacttaaacagaatttaagttaacct 42687390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 44696079 - 44696152
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | |||||||||||||||||||||| ||||||||||| || | |||||| ||||||||| |||||||    
T  44696079 atgtaaactaagtttaaataggttatgtaaacgaagtttacatgaacctgcttaaattgaatttaagttaacct 44696152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 15840266 - 15840194
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  15840266 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 15840194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 42512657 - 42512585
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  42512657 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacataaaccta 42512585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1041 - 1112
Target Start/End: Original strand, 42512592 - 42512664
Alignment:
Q  1041 atgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    ||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||    
T  42512592 atgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaac 42512664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 17602054 - 17602129
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| |||| |||| |||||||||| || |||||||||||||||||| |||||||    
T  17602054 catgtaaactcagtttaagtaggttcatgttaacttagtttacatgaacctacttaaactgaatttaagttaacct 17602129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1041 - 1112
Target Start/End: Complemental strand, 35329352 - 35329281
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    ||||||||| ||||||| ||| |||| ||||||||||| ||||| || |||||||||||||||||| |||||    
T  35329352 atgtaaattgagtttaagtagattatctaaactaagttcacatgaacctacttaaactgaatttaagttaac 35329281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1041 - 1112
Target Start/End: Complemental strand, 38168089 - 38168018
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || || ||||||||||||||| |||||    
T  38168089 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacatatttaaactgaatttaagttaac 38168018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1063 - 1114
Target Start/End: Complemental strand, 43576400 - 43576349
Alignment:
Q  1063 ttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| |||||||    
T  43576400 ttatgtaaactaagtttacatctacttacttaaactgaatttaagttaacct 43576349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 43664017 - 43663942
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| | ||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  43664017 catgtaaactgagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 43663942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1052 - 1114
Target Start/End: Complemental strand, 36057215 - 36057154
Alignment:
Q  1052 gtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||| ||||||||||||| |||||||||||| || |||||||||||||||||| |||||||    
T  36057215 gtttaagtaggttatgtaaa-taagtttacatgaacctacttaaactgaatttaagttaacct 36057154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 11266644 - 11266717
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||  || || ||||||||||||||| |||||||    
T  11266644 atgtaaactaagtttaagtagattatgtaaactaagtttacataaacctaattaaactgaatttaagttaacct 11266717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 12722946 - 12723019
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || ||||||||  |||||||| |||||||    
T  12722946 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaatagaatttaagttaacct 12723019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Complemental strand, 44704296 - 44704223
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| ||||||||||||| ||||| || || |||||||||||||||||| |||||||    
T  44704296 atgtaaactaagtttaagtagattatgtaaactaaatttacctgaacctacttaaactgaatttaagttaacct 44704223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1051 - 1114
Target Start/End: Original strand, 6107 - 6171
Alignment:
Q  1051 agtttaaataggttatgtaaact-aagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| ||| ||||||||||| ||||||||||| || |||||||||||||||||| |||||||    
T  6107 agtttaagtagattatgtaaacttaagtttacatgaacctacttaaactgaatttaagttaacct 6171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 3032544 - 3032616
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  3032544 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 3032616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 3136844 - 3136916
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  3136844 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 3136916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 17602120 - 17602048
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||| ||||| || |||||||||||| |||| || ||||||    
T  17602120 taaattcagtttaagtaggttcatgtaaactaagttaacatgaacctacttaaactgagtttacatgaaccta 17602048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 24822334 - 24822406
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  24822334 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 24822406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 43663951 - 43664023
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||| | |||| || ||||||    
T  43663951 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactcagtttacatgaaccta 43664023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 5599559 - 5599484
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||| | || |||||||||||| ||||| |||||||    
T  5599559 catgtaaactcagtttaagtaggttcatgtaaacttagtttacacgaacctacttaaactgagtttaagttaacct 5599484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 26290445 - 26290370
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| || |||||| |||||| ||| ||||| |||||||||| || |||||||||||||||||| |||||||    
T  26290445 catgtaaactcggtttaagtaggttcatgcaaacttagtttacatgaacctacttaaactgaatttaagttaacct 26290370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 26303702 - 26303627
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| || |||||| |||||| ||| ||||| |||||||||| || |||||||||||||||||| |||||||    
T  26303702 catgtaaactcggtttaagtaggttcatgcaaacttagtttacatgaacctacttaaactgaatttaagttaacct 26303627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 34564730 - 34564655
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||| || ||| ||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  34564730 catgttaactcaatttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 34564655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1060 - 1114
Target Start/End: Complemental strand, 26992116 - 26992062
Alignment:
Q  1060 aggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||||||||||||||||||| | || ||||||||||||||| || |||||||    
T  26992116 aggttatgtaaactaagtttacacgaacctacttaaactgaattgaagttaacct 26992062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1038 - 1112
Target Start/End: Original strand, 32910809 - 32910885
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtac--gtacttaaactgaatttaaattaac 1112  Q
    ||||| |||| | ||||||| ||||||||||||| ||||||||| |||||   |||||||||||||||||| |||||    
T  32910809 tacatataaactaagtttaagtaggttatgtaaattaagtttacttgtacctatacttaaactgaatttaagttaac 32910885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1044 - 1096
Target Start/End: Original strand, 34564664 - 34564717
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaa 1096  Q
    |||||||||||||| |||||| |||||||||||||||||||| || ||||||||    
T  34564664 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaa 34564717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 38946314 - 38946387
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| ||||||||||||| ||| |||| || |||||||||| ||||||| |||||||    
T  38946314 atgtaaacttagtttaagtagattatgtaaactaatttttcatgaacctacttaaacttaatttaagttaacct 38946387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 5599493 - 5599565
Alignment:
Q  1044 taaattcagtttaaataggtta-tgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||| ||||||||| ||||||  ||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  5599493 taaactcagtttaagtaggttcgtgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 5599565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 26290379 - 26290451
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||||||||| |||| || ||||||||| || |||| || ||||||    
T  26290379 taaattcagtttaagtaggttcatgtaaactaagtttgcatgaacctacttaaaccgagtttacatgaaccta 26290451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 26303636 - 26303708
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||||||||| |||| || ||||||||| || |||| || ||||||    
T  26303636 taaattcagtttaagtaggttcatgtaaactaagtttgcatgaacctacttaaaccgagtttacatgaaccta 26303708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1038 - 1098
Target Start/End: Original strand, 33771729 - 33771789
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||| | ||||||||||||| ||||||||| ||||||  ||||| ||||||||||    
T  33771729 tacatgtaaacttagtttaaataggtcatgtaaactgagtttaagtgtacatacttaaact 33771789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1040 - 1080
Target Start/End: Original strand, 44696054 - 44696094
Alignment:
Q  1040 catgtaaattcagtttaaataggttatgtaaactaagttta 1080  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  44696054 catgtaaactcagtttaagtaggttatgtaaactaagttta 44696094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1038 - 1098
Target Start/End: Complemental strand, 44704372 - 44704312
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 1098  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  44704372 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 44704312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1051 - 1114
Target Start/End: Complemental strand, 1848681 - 1848618
Alignment:
Q  1051 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| ||||||||||||| ||||||| ||  ||  ||||||||||||||||| |||||||    
T  1848681 agtttaaacaggttatgtaaaccaagtttatataaaccaacttaaactgaatttaagttaacct 1848618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1059 - 1106
Target Start/End: Original strand, 16635950 - 16635997
Alignment:
Q  1059 taggttatgtaaactaagtttacatgtacgtacttaaactgaatttaa 1106  Q
    ||||||||||||| |||| ||||| |||| ||||||||||||||||||    
T  16635950 taggttatgtaaattaagattacaagtacctacttaaactgaatttaa 16635997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1050 - 1114
Target Start/End: Original strand, 40184451 - 40184519
Alignment:
Q  1050 cagtttaaataggttatgtaaac----taagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||||||||||||||    || ||||||||| || ||||||| |||||||||| |||||||    
T  40184451 cagtttaaataggttatgtaaactaggtaggtttacatgaacctacttaatctgaatttaagttaacct 40184519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1038 - 1108
Target Start/End: Complemental strand, 31793644 - 31793574
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaat 1108  Q
    |||||||||| | | ||||| ||||| ||||||||||||||||  ||||| |||||||||| ||| |||||    
T  31793644 tacatgtaaacttattttaagtaggtcatgtaaactaagtttaagtgtacatacttaaactcaatctaaat 31793574  T

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Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1063 - 1105
Target Start/End: Complemental strand, 39365723 - 39365681
Alignment:
Q  1063 ttatgtaaactaagtttacatgtacgtacttaaactgaattta 1105  Q
    |||||||||||||||||||||| || |||||||||||| ||||    
T  39365723 ttatgtaaactaagtttacatgaacctacttaaactgagttta 39365681  T

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Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1038 - 1108
Target Start/End: Complemental strand, 42687735 - 42687665
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaat 1108  Q
    |||||||||| | | ||||| ||||| |||||||||||||||| |||||  |||||||||| | |||||||    
T  42687735 tacatgtaaacttattttaagtaggtcatgtaaactaagtttaaatgtatatacttaaactcagtttaaat 42687665  T

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Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1073 - 1114
Target Start/End: Complemental strand, 23356889 - 23356848
Alignment:
Q  1073 taagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  23356889 taagtttacatgaacctacttaaactgaatttaagttaacct 23356848  T

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Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1038 - 1099
Target Start/End: Complemental strand, 36057277 - 36057216
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactg 1099  Q
    |||||||||| | ||||||| ||||| ||||||||| ||||||  ||||| |||||||||||    
T  36057277 tacatgtaaacttagtttaagtaggtcatgtaaactgagtttaagtgtacatacttaaactg 36057216  T

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Target: scaffold0003 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1041 - 1112
Target Start/End: Complemental strand, 365466 - 365395
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  365466 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 365395  T

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Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1038 - 1080
Target Start/End: Complemental strand, 365493 - 365451
Alignment:
Q  1038 tacatgtaaattcagtttaaataggttatgtaaactaagttta 1080  Q
    |||||||||| | ||||||| ||||||||||||||||||||||    
T  365493 tacatgtaaacttagtttaagtaggttatgtaaactaagttta 365451  T

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Target: scaffold0578 (Bit Score: 42; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1041 - 1114
Target Start/End: Original strand, 9157 - 9230
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||||| | ||||||| ||| ||||||||| |||||||||||| || |||||||||||||||||| |||||||    
T  9157 atgtaaactaagtttaagtagattatgtaaattaagtttacatgaacctacttaaactgaatttaagttaacct 9230  T

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Target: scaffold0847 (Bit Score: 40; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1063 - 1114
Target Start/End: Original strand, 1 - 52
Alignment:
Q  1063 ttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  1 ttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 52  T

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Target: scaffold0368 (Bit Score: 40; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 14270 - 14345
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| | ||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  14270 catgtaaacttagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 14345  T

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Target: scaffold0368; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Complemental strand, 14336 - 14264
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||| | |||| || ||||||    
T  14336 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactaagtttacatgaaccta 14264  T

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Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1041 - 1112
Target Start/End: Original strand, 200351 - 200422
Alignment:
Q  1041 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 1112  Q
    ||||||| | |||||||  || |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  200351 atgtaaactaagtttaagcagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 200422  T

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Target: scaffold0438 (Bit Score: 36; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Complemental strand, 1782 - 1707
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    |||||||| || |||||| |||||| ||| ||||| |||||||||| || |||||||||||||||||| |||||||    
T  1782 catgtaaactcggtttaagtaggttcatgcaaacttagtttacatgaacctacttaaactgaatttaagttaacct 1707  T

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Target: scaffold0438; HSP #2
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1044 - 1115
Target Start/End: Original strand, 1716 - 1788
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 1115  Q
    |||||||||||||| |||||| ||||||||||||||| |||| || ||||||||| || |||| || ||||||    
T  1716 taaattcagtttaagtaggttcatgtaaactaagtttgcatgaacctacttaaaccgagtttacatgaaccta 1788  T

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Target: scaffold0062 (Bit Score: 36; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1040 - 1114
Target Start/End: Original strand, 40934 - 41009
Alignment:
Q  1040 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 1114  Q
    ||||| || ||| ||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  40934 catgttaactcaatttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 41009  T

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Target: scaffold0062; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1044 - 1096
Target Start/End: Complemental strand, 41000 - 40947
Alignment:
Q  1044 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaa 1096  Q
    |||||||||||||| |||||| |||||||||||||||||||| || ||||||||    
T  41000 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaa 40947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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