View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17260_high_13 (Length: 539)

Name: NF17260_high_13
Description: NF17260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17260_high_13
NF17260_high_13
[»] chr7 (13 HSPs)
chr7 (53-502)||(1703588-1704035)
chr7 (340-449)||(19777924-19778033)
chr7 (345-449)||(26203022-26203126)
chr7 (357-430)||(11740376-11740449)
chr7 (345-413)||(11736139-11736207)
chr7 (359-433)||(7833761-7833835)
chr7 (360-449)||(48984381-48984469)
chr7 (388-449)||(11736212-11736273)
chr7 (173-281)||(22716511-22716621)
chr7 (345-413)||(38448363-38448430)
chr7 (367-429)||(16563495-16563557)
chr7 (367-429)||(16602105-16602167)
chr7 (367-429)||(37928326-37928388)
[»] chr4 (14 HSPs)
chr4 (345-449)||(50086635-50086739)
chr4 (348-449)||(16072348-16072449)
chr4 (345-443)||(49649891-49649989)
chr4 (340-449)||(40161032-40161141)
chr4 (335-442)||(6480663-6480770)
chr4 (338-430)||(27655329-27655423)
chr4 (367-443)||(41377213-41377289)
chr4 (348-430)||(42810389-42810471)
chr4 (348-413)||(21416206-21416271)
chr4 (337-433)||(30116768-30116864)
chr4 (362-449)||(14815384-14815471)
chr4 (345-430)||(50095280-50095365)
chr4 (388-442)||(22280352-22280406)
chr4 (353-399)||(53934089-53934135)
[»] chr8 (12 HSPs)
chr8 (360-449)||(38388529-38388618)
chr8 (345-443)||(1988792-1988890)
chr8 (353-449)||(24757059-24757155)
chr8 (354-428)||(34832302-34832376)
chr8 (345-442)||(1551508-1551605)
chr8 (359-449)||(22266240-22266328)
chr8 (345-449)||(35762296-35762399)
chr8 (340-426)||(37564779-37564865)
chr8 (345-442)||(9791864-9791960)
chr8 (362-412)||(13904055-13904105)
chr8 (349-397)||(12201850-12201898)
chr8 (349-397)||(12446278-12446326)
[»] chr2 (10 HSPs)
chr2 (348-449)||(19994924-19995025)
chr2 (337-444)||(36622114-36622222)
chr2 (345-449)||(41385045-41385149)
chr2 (345-448)||(43248708-43248811)
chr2 (372-449)||(16498137-16498214)
chr2 (353-446)||(19606282-19606375)
chr2 (340-449)||(35501406-35501515)
chr2 (353-413)||(40664663-40664723)
chr2 (333-422)||(18717883-18717972)
chr2 (357-425)||(27896493-27896561)
[»] chr3 (16 HSPs)
chr3 (345-444)||(20585816-20585915)
chr3 (309-449)||(29458040-29458179)
chr3 (345-449)||(26835700-26835804)
chr3 (349-443)||(45054399-45054493)
chr3 (359-449)||(49452624-49452713)
chr3 (345-446)||(14622103-14622204)
chr3 (345-433)||(30863629-30863717)
chr3 (389-449)||(32961187-32961247)
chr3 (345-433)||(35483617-35483705)
chr3 (345-392)||(32961504-32961551)
chr3 (338-429)||(48338839-48338930)
chr3 (368-429)||(17109561-17109622)
chr3 (338-433)||(36436606-36436701)
chr3 (375-430)||(49419085-49419140)
chr3 (335-429)||(4020124-4020218)
chr3 (370-428)||(44291258-44291316)
[»] chr6 (9 HSPs)
chr6 (345-449)||(17900748-17900852)
chr6 (335-449)||(11101906-11102020)
chr6 (345-449)||(26608910-26609013)
chr6 (340-442)||(19418608-19418710)
chr6 (354-442)||(10252979-10253067)
chr6 (348-449)||(22297584-22297684)
chr6 (335-394)||(1970647-1970706)
chr6 (367-429)||(18493269-18493331)
chr6 (340-433)||(34301869-34301963)
[»] chr1 (11 HSPs)
chr1 (345-449)||(5178741-5178845)
chr1 (345-449)||(11802914-11803018)
chr1 (354-441)||(48502580-48502667)
chr1 (359-449)||(52112357-52112446)
chr1 (337-449)||(13643581-13643692)
chr1 (375-432)||(25161449-25161506)
chr1 (372-449)||(50295245-50295322)
chr1 (346-442)||(2356382-2356477)
chr1 (356-429)||(13969113-13969186)
chr1 (372-429)||(15419681-15419738)
chr1 (368-429)||(44109097-44109158)
[»] chr5 (5 HSPs)
chr5 (348-449)||(35556890-35556990)
chr5 (340-449)||(19129728-19129838)
chr5 (340-407)||(26139710-26139777)
chr5 (361-433)||(8435079-8435151)
chr5 (340-426)||(10568975-10569060)
[»] scaffold0005 (1 HSPs)
scaffold0005 (362-449)||(24240-24327)
[»] scaffold0886 (1 HSPs)
scaffold0886 (335-429)||(1098-1192)


Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 53 - 502
Target Start/End: Original strand, 1703588 - 1704035
Alignment:
Q  53 taatataggtcaggtaaccattttgttaggctaaaaaagtatatggactgtgccaagatattttaaaattactcttttcaatttttaaattgcnnnnnnn 152  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||           
T  1703588 taatacaggtcaggtaaccagtttgttaggctaaaaaagtatatggactgtgcgaagatattttaaaattactcttttcaatttttaaattgcttttttt 1703687  T
Q  153 nnnaactgtcgttggtccggcaacaattaaccgtcgttcaatttttcaacgacagttaagtgtcgttagacttttaaaatcggttgaagctatttaaaat 252  Q
       ||| |||| ||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1703688 t--aaccgtcgctggtccgacaacaattaaccgttgttcaattttttaacgacagttaagtgtcgttagacttttaaaatcggttgaagctatttaaaat 1703785  T
Q  253 gtgattgagtcgttctaaaaaatgtccaatggtgaaggatttgattttaattcttagggtcatgttaactagtgtctcgggagacattggtcaaggaatt 352  Q
    ||||||||  ||||||||||||||||||||||||| |||||  | ||||||| |||||||| ||||||| ||||||||||| | ||||||||||||||||    
T  1703786 gtgattgaaccgttctaaaaaatgtccaatggtgagggattcaagtttaatttttagggtcttgttaaccagtgtctcggg-ggcattggtcaaggaatt 1703884  T
Q  353 caaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctg-ctcc 451  Q
    ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||     
T  1703885 caaaagtagaaaaattgtctcggaaatataaactgttacttttgactaactaattattacacaactttttaataaaatcttacctcttttagctgcctcg 1703984  T
Q  452 ggggcaccaattaacattctcctaatttttaaatgaaataattattgatga 502  Q
     |  ||||  |||||||||||||||||||||||||||||||||||||||||    
T  1703985 agaacaccggttaacattctcctaatttttaaatgaaataattattgatga 1704035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 340 - 449
Target Start/End: Complemental strand, 19778033 - 19777924
Alignment:
Q  340 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctct 439  Q
    |||| ||||||| ||||| |||||||||||||||| ||||||||||||||| |||| | |||||||||||||||  ||| |||||||||||||| |||||    
T  19778033 tggttaaggaatccaaaagtagaaaaattatcttgaaaatataaactgttattttttattaactaattattacatcactctttaataaaatcttacctct 19777934  T
Q  440 tttagctgct 449  Q
    ||||||||||    
T  19777933 tttagctgct 19777924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 345 - 449
Target Start/End: Original strand, 26203022 - 26203126
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 444  Q
    ||||||| ||||| |||||||||| |||||||||| ||| | || ||||||||||||||||||||||||  ||||||||||||||| || ||||||||||    
T  26203022 aaggaatccaaaagtagaaaaattgtcttggaaatctaaccagtcacttttgactaactaattattacaccactttttaataaaattttacctcttttag 26203121  T
Q  445 ctgct 449  Q
     ||||    
T  26203122 ttgct 26203126  T

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Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 357 - 430
Target Start/End: Original strand, 11740376 - 11740449
Alignment:
Q  357 aatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaat 430  Q
    |||||||||||| ||||| ||||||||||||||||||||||  ||||||||||||||  |||||||||||||||    
T  11740376 aatagaaaaattgtcttgaaaatataaactgttacttttgatcaactaattattacaccactttttaataaaat 11740449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 345 - 413
Target Start/End: Original strand, 11736139 - 11736207
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattaca 413  Q
    |||||||| |||| ||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  11736139 aaggaatttaaaagtagaaaaattatcttagaaatataaaccgttacttttgaccaactaattattaca 11736207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 433
Target Start/End: Original strand, 7833761 - 7833835
Alignment:
Q  359 tagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 433  Q
    |||||||||| ||||| ||||||||||||||| ||||||| ||||||||||| ||  ||||||||||||||||||    
T  7833761 tagaaaaattgtcttgaaaatataaactgttatttttgaccaactaattattgcactactttttaataaaatctt 7833835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 360 - 449
Target Start/End: Complemental strand, 48984469 - 48984381
Alignment:
Q  360 agaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 449  Q
    ||||||||||| ||| ||| || ||| ||||||||| |||||||||||||||||  |||||||||||||||||| ||||||||| |||||    
T  48984469 agaaaaattattttgaaaacattaacggttactttt-actaactaattattacaccactttttaataaaatcttacctcttttaactgct 48984381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 449
Target Start/End: Original strand, 11736212 - 11736273
Alignment:
Q  388 ttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 449  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||| | |||||| ||||||    
T  11736212 ttacttttgaccaactaattattacaccactttttaataaaatcttacttcttttggctgct 11736273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 281
Target Start/End: Complemental strand, 22716621 - 22716511
Alignment:
Q  173 caacaattaaccgtcgttcaatttttcaacgacagttaagtgtcgttagac--ttttaaaatcggttgaagctatttaaaatgtgattgagtcgttctaa 270  Q
    ||||||||||  ||| ||| |||||  ||||||||||||||||| || |||  |||||| ||||||| || ||||||||||||||||| | | | || ||    
T  22716621 caacaattaattgtcattcgattttgtaacgacagttaagtgtcatttgacaattttaagatcggttaaacctatttaaaatgtgattaaatagctcaaa 22716522  T
Q  271 aaaatgtccaa 281  Q
    |||||||||||    
T  22716521 aaaatgtccaa 22716511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 413
Target Start/End: Original strand, 38448363 - 38448430
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattaca 413  Q
    |||||||||||||||| ||||||||| ||| |||||||||   ||  ||||||||||||||||||||||    
T  38448363 aaggaattcaaaaata-aaaaattattttgaaaatataaatcattgtttttgactaactaattattaca 38448430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 429
Target Start/End: Original strand, 16563495 - 16563557
Alignment:
Q  367 ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 429  Q
    |||||||||||||||||||| ||| |||| | ||| |||| ||||||  ||||||||||||||    
T  16563495 ttatcttggaaatataaactattatttttcagtaaataataattacattactttttaataaaa 16563557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 429
Target Start/End: Complemental strand, 16602167 - 16602105
Alignment:
Q  367 ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 429  Q
    |||||||||||||||||||| ||| |||| | ||| |||| ||||||  ||||||||||||||    
T  16602167 ttatcttggaaatataaactattatttttcagtaaataataattacattactttttaataaaa 16602105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 429
Target Start/End: Complemental strand, 37928388 - 37928326
Alignment:
Q  367 ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 429  Q
    |||||||| ||||||||| ||||| ||||||  || ||||||||||| |||||||| ||||||    
T  37928388 ttatcttgaaaatataaaatgttatttttgataaagtaattattacacaacttttttataaaa 37928326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 2e-35; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 345 - 449
Target Start/End: Original strand, 50086635 - 50086739
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 444  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||||||||||||||    
T  50086635 aaggaatccaaaagtagaaaaattgtcttggaaatataaactgttacttttaactaactaattattacaccattttttaataaaatcttgcctcttttag 50086734  T
Q  445 ctgct 449  Q
    |||||    
T  50086735 ctgct 50086739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 348 - 449
Target Start/End: Complemental strand, 16072449 - 16072348
Alignment:
Q  348 gaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctg 447  Q
    |||| ||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||  | |||||||||||||||| |||||||||||||    
T  16072449 gaatccaaaagtagaaaaattgtcttggaaatataaaccgttacttttgactaactaattattacatcattttttaataaaatcttacctcttttagctg 16072350  T
Q  448 ct 449  Q
    ||    
T  16072349 ct 16072348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 345 - 443
Target Start/End: Original strand, 49649891 - 49649989
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttta 443  Q
    ||||||| |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||||    
T  49649891 aaggaatccaaaaataaaaaaattatgttggaaatataaacggttacttttgactaactaattattacataactttttaataaaatattatctctttta 49649989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 340 - 449
Target Start/End: Original strand, 40161032 - 40161141
Alignment:
Q  340 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctct 439  Q
    |||| |||||||  |||| || ||||||||||||| |||||||||| |||| ||||||||  ||||||||||||  |||||||||||||||||| |||||    
T  40161032 tggttaaggaatctaaaagtaaaaaaattatcttgaaaatataaaccgttatttttgactgcctaattattacaccactttttaataaaatcttacctct 40161131  T
Q  440 tttagctgct 449  Q
    |||| |||||    
T  40161132 tttacctgct 40161141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 442
Target Start/End: Original strand, 6480663 - 6480770
Alignment:
Q  335 gacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttg 434  Q
    |||| |||| || |||| ||||| || ||||| ||||||| ||||||||||||||| |||| |||||||||||||||||  |||||||||| |||||||     
T  6480663 gacactggttaatgaatccaaaactaaaaaaaatatcttgaaaatataaactgttattttttactaactaattattacatcactttttaattaaatctta 6480762  T
Q  435 cctctttt 442  Q
    ||||||||    
T  6480763 cctctttt 6480770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 27655423 - 27655329
Alignment:
Q  338 attggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttac--ttttgactaactaattattacagaactttttaataaaat 430  Q
    |||||| ||||||| | ||| |||||||||| |||| |||||||||||||||||  ||||||||||||||||||||||  |||||||||||||||    
T  27655423 attggttaaggaatgctaaagtagaaaaattgtcttagaaatataaactgttacttttttgactaactaattattacaccactttttaataaaat 27655329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 367 - 443
Target Start/End: Complemental strand, 41377289 - 41377213
Alignment:
Q  367 ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttta 443  Q
    ||||||| ||||||||||| |||||||||||||||||||||||| ||  ||||||||||||||| || |||||||||    
T  41377289 ttatcttagaaatataaaccgttacttttgactaactaattattgcatcactttttaataaaattttacctctttta 41377213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 430
Target Start/End: Complemental strand, 42810471 - 42810389
Alignment:
Q  348 gaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaat 430  Q
    |||||||||| |||||||||| |||| |||||||||||||||| ||||||| ||||||| ||||||  |||||| ||||||||    
T  42810471 gaattcaaaagtagaaaaattgtcttagaaatataaactgttatttttgacaaactaataattacatcacttttcaataaaat 42810389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 413
Target Start/End: Complemental strand, 21416271 - 21416206
Alignment:
Q  348 gaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattaca 413  Q
    |||| ||||| |||||||||| | |||||||||||||  |||||||||||||||||||||||||||    
T  21416271 gaatccaaaagtagaaaaattgtattggaaatataaaaggttacttttgactaactaattattaca 21416206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 433
Target Start/End: Complemental strand, 30116864 - 30116768
Alignment:
Q  337 cattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 433  Q
    ||||||| || ||||  |||| || ||||||| |||||||||||||||  |||| |||||| ||||||||||||| |  | ||||||||||||||||    
T  30116864 cattggttaatgaatctaaaagtaaaaaaattgtcttggaaatataaatcgttatttttgattaactaattattatatcattttttaataaaatctt 30116768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 362 - 449
Target Start/End: Original strand, 14815384 - 14815471
Alignment:
Q  362 aaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 449  Q
    ||||||| | |||||||||||| || ||| ||||||| |||||||||| |||  |  ||||||||||||||| | |||||||||||||    
T  14815384 aaaaattgtgttggaaatataaccttttatttttgaccaactaattatcacaccagcttttaataaaatcttacttcttttagctgct 14815471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 345 - 430
Target Start/End: Complemental strand, 50095365 - 50095280
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaat 430  Q
    |||||||| |||| || ||||||| | ||| ||||| ||||| |||||||| ||||||||||||||||   | |||||||||||||    
T  50095365 aaggaatttaaaagtaaaaaaattgttttgaaaatacaaactattacttttaactaactaattattacgatattttttaataaaat 50095280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 22280406 - 22280352
Alignment:
Q  388 ttacttttgactaactaattattacagaactttttaataaaatcttgcctctttt 442  Q
    ||||||||||| ||||||||||||||  || ||||||||||||||| | ||||||    
T  22280406 ttacttttgaccaactaattattacaccacattttaataaaatcttacttctttt 22280352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 53934089 - 53934135
Alignment:
Q  353 caaaaatagaaaaattatcttggaaatataaactgttacttttgact 399  Q
    ||||||| |||||||||||||| ||||||||| ||||| ||||||||    
T  53934089 caaaaattgaaaaattatcttgtaaatataaattgttaattttgact 53934135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 360 - 449
Target Start/End: Complemental strand, 38388618 - 38388529
Alignment:
Q  360 agaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 449  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  38388618 agaaaaattatcttggaaatataaactattacttttgactaactaattattacatcactttttaataaaatcttacctcttttagctgct 38388529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 345 - 443
Target Start/End: Complemental strand, 1988890 - 1988792
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttta 443  Q
    ||||||| ||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||    
T  1988890 aaggaatccaaaagtagaaaaattgtcttcgaaatataaactgttacttttgactaactaattattacattactttttaataaattcttacctctttta 1988792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 449
Target Start/End: Original strand, 24757059 - 24757155
Alignment:
Q  353 caaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 449  Q
    ||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||||    
T  24757059 caaaagtagaaaaattgacttgaaaatataaactgttacttttgactaactaattattacatcactttttaataaaatcttatctcttttagctgct 24757155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 354 - 428
Target Start/End: Complemental strand, 34832376 - 34832302
Alignment:
Q  354 aaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaa 428  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  34832376 aaaagtagaaaaattattttggaaatataaattgttacttttgactaactaattattacaccactttttaataaa 34832302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 1551605 - 1551508
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttt 442  Q
    ||||||| ||||| |||||||||| ||||  ||||||||| ||||||||||||| |||||||||| |||  |||||||||||||||||| ||||||||    
T  1551605 aaggaatccaaaagtagaaaaattgtcttttaaatataaagtgttacttttgaccaactaattatgacaccactttttaataaaatcttacctctttt 1551508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 22266240 - 22266328
Alignment:
Q  359 tagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 449  Q
    |||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||   |||||||||||||||||| ||||||||| |||||    
T  22266240 tagaaaaattgtcttgaaaacataaactgttactttttactaactaattattac--cactttttaataaaatcttacctcttttaactgct 22266328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 345 - 449
Target Start/End: Complemental strand, 35762399 - 35762296
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 444  Q
    ||||||| ||||||||||||||  |  ||| ||||||||||||||| |||||| ||| |||||||||||  ||||||||||||||| ||||||||||||     
T  35762399 aaggaatccaaaaatagaaaaaaaaatttgaaaatataaactgtta-ttttgattaattaattattacaccactttttaataaaattttgcctcttttaa 35762301  T
Q  445 ctgct 449  Q
    |||||    
T  35762300 ctgct 35762296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 340 - 426
Target Start/End: Complemental strand, 37564865 - 37564779
Alignment:
Q  340 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaata 426  Q
    |||| |||||||  |||| ||||||||||||||| ||||||||  | |||||||||||| || |||||||||||  |||||||||||    
T  37564865 tggttaaggaatctaaaagtagaaaaattatctttgaaatatatgcggttacttttgaccaattaattattacaccactttttaata 37564779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 9791864 - 9791960
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttt 442  Q
    ||||||| ||| |||| ||||||| ||||| |||||||||||| || ||||||  |||||||||||| |  |||||||||||||||||| | ||||||    
T  9791864 aaggaatccaagaata-aaaaattgtcttgaaaatataaactgctatttttgatcaactaattattatatcactttttaataaaatcttacttctttt 9791960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 412
Target Start/End: Original strand, 13904055 - 13904105
Alignment:
Q  362 aaaaattatcttggaaatataaactgttacttttgactaactaattattac 412  Q
    ||||||| ||||| ||||||||||||||| ||||||| |||||||||||||    
T  13904055 aaaaattgtcttgaaaatataaactgttatttttgaccaactaattattac 13904105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 397
Target Start/End: Complemental strand, 12201898 - 12201850
Alignment:
Q  349 aattcaaaaatagaaaaattatcttggaaatataaactgttacttttga 397  Q
    ||||||||||||||||  || |||||||||||||| |||||||||||||    
T  12201898 aattcaaaaatagaaattttgtcttggaaatataagctgttacttttga 12201850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 397
Target Start/End: Complemental strand, 12446326 - 12446278
Alignment:
Q  349 aattcaaaaatagaaaaattatcttggaaatataaactgttacttttga 397  Q
    ||||||||||||||||  || |||||||||||||| |||||||||||||    
T  12446326 aattcaaaaatagaaattttgtcttggaaatataagctgttacttttga 12446278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 348 - 449
Target Start/End: Original strand, 19994924 - 19995025
Alignment:
Q  348 gaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctg 447  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||| ||||||||| |||    
T  19994924 gaatccaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacatcactttttaataaatgcttacctcttttaactg 19995023  T
Q  448 ct 449  Q
    ||    
T  19995024 ct 19995025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 337 - 444
Target Start/End: Complemental strand, 36622222 - 36622114
Alignment:
Q  337 cattggtcaaggaattcaaaaa-tagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgc 435  Q
    ||||||| |||||||  ||||| |||||||||| |||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |    
T  36622222 cattggttaaggaataaaaaaagtagaaaaattgtcttagaaatataaactattacttttgactaactaattattacacaactttttaataaaatcttac 36622123  T
Q  436 ctcttttag 444  Q
    |||||||||    
T  36622122 ctcttttag 36622114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 345 - 449
Target Start/End: Complemental strand, 41385149 - 41385045
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 444  Q
    ||||||| |||||||||||||||| | ||||||||||||| ||||||||||||| |||||||||| |||  |||||| |||||||| || | ||||||||    
T  41385149 aaggaatccaaaaatagaaaaattgtattggaaatataaattgttacttttgaccaactaattatcacaccacttttcaataaaatattacttcttttag 41385050  T
Q  445 ctgct 449  Q
    |||||    
T  41385049 ctgct 41385045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 345 - 448
Target Start/End: Complemental strand, 43248811 - 43248708
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 444  Q
    ||||||| ||||| |||||||||| |||| |||||||||||||||||||||||| ||||||||||||||  | ||||| |||||||||| | |||||||     
T  43248811 aaggaatccaaaagtagaaaaattgtcttagaaatataaactgttacttttgaccaactaattattacaccaatttttgataaaatcttacttcttttat 43248712  T
Q  445 ctgc 448  Q
    ||||    
T  43248711 ctgc 43248708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 372 - 449
Target Start/End: Original strand, 16498137 - 16498214
Alignment:
Q  372 ttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 449  Q
    ||||||||||||| ||||| ||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||||    
T  16498137 ttggaaatataaattgttaattttgactaactaattattacatcactttttaataaaatcttacctcttttaactgct 16498214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 353 - 446
Target Start/End: Original strand, 19606282 - 19606375
Alignment:
Q  353 caaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagct 446  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||| | ||| ||||||    
T  19606282 caaaagtagaaaaactattttggaaatataaactgttacttttgatgaactaattattacaccactttttaataaaatcttacatctcttagct 19606375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 340 - 449
Target Start/End: Complemental strand, 35501515 - 35501406
Alignment:
Q  340 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctct 439  Q
    |||| ||||| | ||||| ||||||||||   ||||||||||||||| ||| ||||||||||||||||||||||  |||||||||||||||||| | |||    
T  35501515 tggttaaggattccaaaagtagaaaaattgatttggaaatataaacttttatttttgactaactaattattacatcactttttaataaaatcttacttct 35501416  T
Q  440 tttagctgct 449  Q
    |||| |||||    
T  35501415 tttacctgct 35501406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 40664663 - 40664723
Alignment:
Q  353 caaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattaca 413  Q
    ||||| || ||||||| |||||||||||||||||||||||||||   ||||||||| ||||    
T  40664663 caaaagtaaaaaaattgtcttggaaatataaactgttacttttggtcaactaattactaca 40664723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 422
Target Start/End: Complemental strand, 18717972 - 18717883
Alignment:
Q  333 gagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaacttttt 422  Q
    ||||||||||| |||||||| | |||||||||  |||| ||  ||||||||  ||||||||||||  || |||| |||||| ||||||||    
T  18717972 gagacattggttaaggaatttacaaatagaaattttattttaaaaatataagatgttacttttgatcaagtaatgattacacaacttttt 18717883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 357 - 425
Target Start/End: Complemental strand, 27896561 - 27896493
Alignment:
Q  357 aatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaat 425  Q
    ||||||||| || | || ||||||||| ||||||||||||| | | |||| |||||| |||||||||||    
T  27896561 aatagaaaatttgttttagaaatataagctgttacttttgatttagtaataattacacaactttttaat 27896493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 345 - 444
Target Start/End: Complemental strand, 20585915 - 20585816
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 444  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||    
T  20585915 aaggaattcaaaagtagaaaaattgttttggaaatataaactgttacttttgattaactaattattacaccactttttaataaaatcttacctcttttag 20585816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 309 - 449
Target Start/End: Complemental strand, 29458179 - 29458040
Alignment:
Q  309 gggtcatgttaactagtgtctcgggagacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaatta 408  Q
    ||||| |||||||||||| | ||| || || |||| |||||||  |||| |||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  29458179 gggtcttgttaactagtgccccgg-aggcactggttaaggaatctaaaagtagaaaaattgtcttggaaatataaactgttatttttgactaactaatta 29458081  T
Q  409 ttacagaactttttaataaaatcttgcctcttttagctgct 449  Q
    |||||  ||||||||||||||| ||  ||||||||||||||    
T  29458080 ttacaccactttttaataaaatattatctcttttagctgct 29458040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 345 - 449
Target Start/End: Original strand, 26835700 - 26835804
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 444  Q
    ||||||||||||| |||||||||| ||||| ||||||||| |||||||||||| ||||||||||||| |  ||||||||||||||| ||  |||||||||    
T  26835700 aaggaattcaaaagtagaaaaattgtcttgaaaatataaattgttacttttgattaactaattattatatcactttttaataaaattttaactcttttag 26835799  T
Q  445 ctgct 449  Q
    |||||    
T  26835800 ctgct 26835804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 349 - 443
Target Start/End: Complemental strand, 45054493 - 45054399
Alignment:
Q  349 aattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttta 443  Q
    ||||||||| |||||||||| | || |||||||||||||||||||||||||||||||||||||||  | |||||||||||||||| | |||||||    
T  45054493 aattcaaaagtagaaaaattgtgttagaaatataaactgttacttttgactaactaattattacactattttttaataaaatcttacttctttta 45054399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 49452624 - 49452713
Alignment:
Q  359 tagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 449  Q
    |||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||  | ||||||||||| |||| ||||||||| |||||    
T  49452624 tagaaaaattgttttgaaaatataaactgtta-ttttgactaactaattattacatcattttttaataaattcttacctcttttaactgct 49452713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 446
Target Start/End: Complemental strand, 14622204 - 14622103
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 444  Q
    ||||||| |||||||||||||||| | ||| ||||||||| ||||||||||||| |||||||| | |||  |||||| |||||||| || | ||||||||    
T  14622204 aaggaatccaaaaatagaaaaattgtattgaaaatataaattgttacttttgaccaactaattttcacaccacttttcaataaaatattacttcttttag 14622105  T
Q  445 ct 446  Q
    ||    
T  14622104 ct 14622103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 433
Target Start/End: Original strand, 30863629 - 30863717
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 433  Q
    ||||||||||||| |||||||||| ||||  ||||||||| ||||| |||| |||||| ||||||||||  |||||| |||||||||||    
T  30863629 aaggaattcaaaagtagaaaaattgtcttcaaaatataaattgttatttttaactaacaaattattacaccacttttcaataaaatctt 30863717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 449
Target Start/End: Complemental strand, 32961247 - 32961187
Alignment:
Q  389 tacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 449  Q
    ||||||| |||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  32961247 tactttttactaactaattattacaccactttttaataaaatcttacctcttttagctgct 32961187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 345 - 433
Target Start/End: Complemental strand, 35483705 - 35483617
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 433  Q
    ||||||||||||| |||||||| | ||||  ||||||||||| ||||||||||  |||||||||||||   ||| ||||||||||||||    
T  35483705 aaggaattcaaaagtagaaaaactgtcttacaaatataaacttttacttttgatcaactaattattactccactctttaataaaatctt 35483617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 392
Target Start/End: Complemental strand, 32961551 - 32961504
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttact 392  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  32961551 aaggaatccaaaagtagaaaaattatcttggaaatataaactgttact 32961504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 429
Target Start/End: Complemental strand, 48338930 - 48338839
Alignment:
Q  338 attggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 429  Q
    |||||| || ||||| | |||||||||  |||||||||||||||||  ||||| ||||||  || ||||||||||| |||||||| ||||||    
T  48338930 attggttaaagaatttataaatagaaattttatcttggaaatataagatgttatttttgataaagtaattattacacaacttttttataaaa 48338839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 368 - 429
Target Start/End: Original strand, 17109561 - 17109622
Alignment:
Q  368 tatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 429  Q
    ||||||||||||||||||||| || ||| | ||| |||| |||||| |||||||||||||||    
T  17109561 tatcttggaaatataaactgtaacattttattaagtaataattacataactttttaataaaa 17109622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 433
Target Start/End: Complemental strand, 36436701 - 36436606
Alignment:
Q  338 attggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 433  Q
    |||||| ||| |||| |||||||||||   | ||||| ||||||||||| ||| ||||||  || |||||||| ||  ||||||||||||||||||    
T  36436701 attggttaagcaatttaaaaatagaaattatgtcttgtaaatataaacttttatttttgatcaaataattattgcactactttttaataaaatctt 36436606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 430
Target Start/End: Original strand, 49419085 - 49419140
Alignment:
Q  375 gaaatataaactgttacttttgactaactaattattacagaactttttaataaaat 430  Q
    |||||||||| ||| |||||| | |||||||| |||||| ||||||||||||||||    
T  49419085 gaaatataaattgtcactttttattaactaataattacataactttttaataaaat 49419140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 429
Target Start/End: Complemental strand, 4020218 - 4020124
Alignment:
Q  335 gacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 429  Q
    |||| |||| |||||||  | |||||||||  || ||||| ||||||||| ||||| |||||| ||| ||||||||||| || ||||| ||||||    
T  4020218 gacaatggttaaggaatctacaaatagaaattttgtcttgaaaatataaaatgttaattttgattaagtaattattacacaattttttcataaaa 4020124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 44291258 - 44291316
Alignment:
Q  370 tcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaa 428  Q
    ||||||||||||||||||| |||||| | ||| |||| ||||||  |||||||||||||    
T  44291258 tcttggaaatataaactgtcactttttattaagtaataattacattactttttaataaa 44291316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 345 - 449
Target Start/End: Original strand, 17900748 - 17900852
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 444  Q
    ||||||| ||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||  |||||||||||||||||| |||||||||     
T  17900748 aaggaatccaaaagtagaaaaattgtcttggagatataaactcttacttttgactaactaattattacaccactttttaataaaatcttacctcttttaa 17900847  T
Q  445 ctgct 449  Q
    |||||    
T  17900848 ctgct 17900852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 335 - 449
Target Start/End: Complemental strand, 11102020 - 11101906
Alignment:
Q  335 gacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttg 434  Q
    |||| |||| ||||||| ||||| |||||||||||||||  |||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||     
T  11102020 gacactggttaaggaatccaaaagtagaaaaattatcttaaaaatataaacagttacttttgactaactaattattaaactactttttaataaaatctta 11101921  T
Q  435 cctcttttagctgct 449  Q
    |||||||||| ||||    
T  11101920 cctcttttagttgct 11101906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 345 - 449
Target Start/End: Original strand, 26608910 - 26609013
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 444  Q
    |||||||  ||||||| |||| || ||||| ||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||  ||||||||     
T  26608910 aaggaatctaaaaata-aaaagttgtcttgaaaatataaactgttacttttgactagctaattattacatcactttttaataaaatcttatctcttttaa 26609008  T
Q  445 ctgct 449  Q
    |||||    
T  26609009 ctgct 26609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 340 - 442
Target Start/End: Complemental strand, 19418710 - 19418608
Alignment:
Q  340 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctct 439  Q
    |||| ||||||| ||||| || ||||||| ||||  ||||||||||||||||||||||| | ||||||||||||  |||||||||||||||||| | |||    
T  19418710 tggttaaggaatccaaaagtaaaaaaattgtcttaaaaatataaactgttacttttgaccagctaattattacatcactttttaataaaatcttacttct 19418611  T
Q  440 ttt 442  Q
    |||    
T  19418610 ttt 19418608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 354 - 442
Target Start/End: Complemental strand, 10253067 - 10252979
Alignment:
Q  354 aaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttt 442  Q
    |||| |||||||| | ||||| ||||||||||||||| ||||||||||||||||||||||  | |||||||||||||||| | ||||||    
T  10253067 aaaagtagaaaaactgtcttgaaaatataaactgttatttttgactaactaattattacatcattttttaataaaatcttacttctttt 10252979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 449
Target Start/End: Original strand, 22297584 - 22297684
Alignment:
Q  348 gaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctg 447  Q
    ||||||| || |||||||||| ||||| |||||||||  |||||||||||| ||||||||||||||  || |||||||||||| || | |||||||||||    
T  22297584 gaattcagaagtagaaaaattgtcttgaaaatataaatcgttacttttgacaaactaattattacaccac-ttttaataaaattttacttcttttagctg 22297682  T
Q  448 ct 449  Q
    ||    
T  22297683 ct 22297684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 394
Target Start/End: Original strand, 1970647 - 1970706
Alignment:
Q  335 gacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttt 394  Q
    |||| |||| ||| |||| |||||||| |||||||||||| |||||||||||||||||||    
T  1970647 gacactggttaagaaatttaaaaatagtaaaattatcttgaaaatataaactgttacttt 1970706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 429
Target Start/End: Complemental strand, 18493331 - 18493269
Alignment:
Q  367 ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 429  Q
    |||||||| ||||||||| ||||||||||||  || ||||||||||| |||||||| ||||||    
T  18493331 ttatcttgaaaatataaaatgttacttttgatcaagtaattattacaaaacttttttataaaa 18493269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 433
Target Start/End: Complemental strand, 34301963 - 34301869
Alignment:
Q  340 tggtcaaggaattcaaaaatagaaaaa-ttatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 433  Q
    |||| |||||||||||||||| ||||| |||| |   || ||||||||||||  |||||| |||||||||||| |  ||||||||||||||||||    
T  34301963 tggttaaggaattcaaaaataaaaaaaattatttaaaaattataaactgttatgtttgaccaactaattattataccactttttaataaaatctt 34301869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 345 - 449
Target Start/End: Complemental strand, 5178845 - 5178741
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 444  Q
    ||||||| ||||| |||||||||| ||||||||| |||||||||||||||| |||||||||||||||||  ||||||||||||||| || ||| ||||||    
T  5178845 aaggaatccaaaagtagaaaaattgtcttggaaacataaactgttactttttactaactaattattacaccactttttaataaaattttacctattttag 5178746  T
Q  445 ctgct 449  Q
    |||||    
T  5178745 ctgct 5178741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 345 - 449
Target Start/End: Complemental strand, 11803018 - 11802914
Alignment:
Q  345 aaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttag 444  Q
    ||||||| ||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||   ||||||||    
T  11803018 aaggaatccaaaagtagaaaaattgttttggaaatataaactgttacttttgactaactaattattacattactttttaataaattctttagtcttttag 11802919  T
Q  445 ctgct 449  Q
    |||||    
T  11802918 ctgct 11802914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 354 - 441
Target Start/End: Complemental strand, 48502667 - 48502580
Alignment:
Q  354 aaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttt 441  Q
    |||| |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| || |||||||    
T  48502667 aaaagtagaaaaattgtcttgaaaatataagctgttacttttgactaactaattattacacaactttttaataaaattttacctcttt 48502580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 449
Target Start/End: Complemental strand, 52112446 - 52112357
Alignment:
Q  359 tagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 449  Q
    |||||||||| |||| |||| |||||| ||||||||| ||||||||| |||||||  ||||||||||||||||||  ||||||||||||||    
T  52112446 tagaaaaattgtctttgaaacataaacggttactttt-actaactaactattacaccactttttaataaaatcttttctcttttagctgct 52112357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 449
Target Start/End: Complemental strand, 13643692 - 13643581
Alignment:
Q  337 cattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcc 436  Q
    ||||||| |||||||||| || || ||||||| ||||| |||||||||| |||||||||||| || |||||||||||  || |||||||||||| ||       
T  13643692 cattggttaaggaattcataagtaaaaaaattgtcttgaaaatataaaccgttacttttgacaaattaattattacaccac-ttttaataaaattttatt 13643594  T
Q  437 tcttttagctgct 449  Q
    |||||||||||||    
T  13643593 tcttttagctgct 13643581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 375 - 432
Target Start/End: Original strand, 25161449 - 25161506
Alignment:
Q  375 gaaatataaactgttacttttgactaactaattattacagaactttttaataaaatct 432  Q
    ||||||||||||||||  ||| |||||||||||||||||  |||||||||||||||||    
T  25161449 gaaatataaactgttatattttactaactaattattacaccactttttaataaaatct 25161506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 449
Target Start/End: Complemental strand, 50295322 - 50295245
Alignment:
Q  372 ttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 449  Q
    ||||||||||||||||||| |||| || ||||||||||||||  | |||||| ||||||||  | |||||||||||||    
T  50295322 ttggaaatataaactgttatttttaaccaactaattattacaacattttttactaaaatctcacttcttttagctgct 50295245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 2356382 - 2356477
Alignment:
Q  346 aggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctctttt 442  Q
    |||||| ||||| || ||||||| ||||  ||||||||| ||||| ||||||| ||||||| |||||| ||||||| ||||||||||| | ||||||    
T  2356382 aggaatccaaaagtaaaaaaattgtcttaaaaatataaattgttatttttgaccaactaat-attacacaacttttaaataaaatcttacttctttt 2356477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 429
Target Start/End: Original strand, 13969113 - 13969186
Alignment:
Q  356 aaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 429  Q
    |||||||||  || ||||| ||||||||| |||||||||| | ||| ||||||||||| || ||||| ||||||    
T  13969113 aaatagaaattttgtcttgaaaatataaaatgttacttttaattaagtaattattacacaattttttcataaaa 13969186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 15419681 - 15419738
Alignment:
Q  372 ttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 429  Q
    |||||||||||||||||||||||| | ||| |||| |||| |  ||||||||||||||    
T  15419681 ttggaaatataaactgttactttttattaagtaataattatattactttttaataaaa 15419738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 429
Target Start/End: Original strand, 44109097 - 44109158
Alignment:
Q  368 tatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 429  Q
    |||||||||||||||||||||  ||||| | ||| |||| ||||||  ||||||||||||||    
T  44109097 tatcttggaaatataaactgtccctttttattaagtaataattacattactttttaataaaa 44109158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 449
Target Start/End: Complemental strand, 35556990 - 35556890
Alignment:
Q  348 gaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctg 447  Q
    |||||||||| |||||||||| ||||| ||||||||||||  | ||||||||||||||||||||||  || |||||||||| |||| |||||||||| ||    
T  35556990 gaattcaaaagtagaaaaattgtcttgaaaatataaactgccatttttgactaactaattattacaccac-ttttaataaattcttacctcttttagttg 35556892  T
Q  448 ct 449  Q
    ||    
T  35556891 ct 35556890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 449
Target Start/End: Complemental strand, 19129838 - 19129728
Alignment:
Q  340 tggtcaaggaattcaaaaa-tagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctc 438  Q
    |||| ||||||| |||||| || ||||||| | |||||||||||||| | |||||||||||||||||||||||    | |||||||||||||||| ||||    
T  19129838 tggttaaggaatccaaaaagtaaaaaaattgtattggaaatataaacagctacttttgactaactaattattaatccattttttaataaaatcttacctc 19129739  T
Q  439 ttttagctgct 449  Q
    ||||| |||||    
T  19129738 ttttatctgct 19129728  T

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Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 407
Target Start/End: Complemental strand, 26139777 - 26139710
Alignment:
Q  340 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaatt 407  Q
    |||| ||||||| ||||| |||||||| | |||||||||||||| | |||||||||||||||||||||    
T  26139777 tggttaaggaatccaaaagtagaaaaactgtcttggaaatataaccggttacttttgactaactaatt 26139710  T

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Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 433
Target Start/End: Complemental strand, 8435151 - 8435079
Alignment:
Q  361 gaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatctt 433  Q
    |||||||| ||||||||||||||| ||| ||||||||| ||||||| |||| |  | ||||||||||||||||    
T  8435151 gaaaaattgtcttggaaatataaagtgtaacttttgaccaactaataattataccattttttaataaaatctt 8435079  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 426
Target Start/End: Complemental strand, 10569060 - 10568975
Alignment:
Q  340 tggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaata 426  Q
    |||| ||||||| ||||| || ||||||| ||||  ||||||||||| |||||||||||  ||| |||||||||  |||||||||||    
T  10569060 tggttaaggaatccaaaagtaaaaaaattgtcttaaaaatataaacttttacttttgaccgact-attattacaccactttttaata 10568975  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 362 - 449
Target Start/End: Complemental strand, 24327 - 24240
Alignment:
Q  362 aaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaatcttgcctcttttagctgct 449  Q
    ||||||| | |||||||||||| || ||| ||||||| |||||||||| |||  |  ||||||||||||||| | |||||||||||||    
T  24327 aaaaattgtgttggaaatataaccttttatttttgaccaactaattatcacaccagcttttaataaaatcttacttcttttagctgct 24240  T

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Target: scaffold0886 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 429
Target Start/End: Original strand, 1098 - 1192
Alignment:
Q  335 gacattggtcaaggaattcaaaaatagaaaaattatcttggaaatataaactgttacttttgactaactaattattacagaactttttaataaaa 429  Q
    |||| |||||||| |||| | ||||||||   || ||||| ||||||||||||| |||||| | ||| |||| ||||||  ||||||||||||||    
T  1098 gacactggtcaagaaatttataaatagaatttttttcttgaaaatataaactgtcactttttattaagtaataattacattactttttaataaaa 1192  T

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