View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17260_high_57 (Length: 294)
Name: NF17260_high_57
Description: NF17260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17260_high_57 |
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Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 16 - 278
Target Start/End: Original strand, 34384620 - 34384882
Alignment:
| Q |
16 |
atcatggaggttgttgcaagaattgttggagcctgcacttctgaactttacattttccttaatgtctattagccttgttgcaaacctaataaatagtaaa |
115 |
Q |
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| T |
34384620 |
atcatggaggttgttgcaagaattgttggagcctgcacttctgaactttacattttccttaatgtctattagccttgttgcaaacctaataaatagtaaa |
34384719 |
T |
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| Q |
116 |
agatgtcggcagaggactaagaaatggaagggaaaaaatgtgatctcaattgaaatgagagacttactgggttccttcaactattggttcaccttctttg |
215 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34384720 |
agatgtcggcagaggactaagaaattgaagggaaaaaatgtgatctcaattgtaatgagagacttactgggttccttcaactattggttcaccttctttg |
34384819 |
T |
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| Q |
216 |
aaaaattcattgtgcgtctcttgccatccatcatcaacgatgataaactttggtgtaaaacct |
278 |
Q |
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| T |
34384820 |
aaaaattcattgtgcgtctcttgccatccatcatcaacgatgataaactttggtgtaaaacct |
34384882 |
T |
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