View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17260_high_65 (Length: 273)
Name: NF17260_high_65
Description: NF17260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17260_high_65 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 14 - 273
Target Start/End: Original strand, 47127298 - 47127557
Alignment:
| Q |
14 |
acatgaggaaatcctattcgcactgttagaagtttcggattttgaacttacctcttgagcagattagccggtagtgcttgttcactgaatacccaatttt |
113 |
Q |
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| T |
47127298 |
acatgaggaaatcctattcgcactgttagaagtttcggattttgaacttacctcttgagcagattagcaggtagtgcttgttcagtgaatacccaatttt |
47127397 |
T |
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| Q |
114 |
tatatacaacagctgacatttccaatgcaaatttaccagggaaaactgttttctctagtacccctccagcgttgataagtgtatgcctagctaaggcatt |
213 |
Q |
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| T |
47127398 |
tatatacaacagctgacatttccaatgcaaatttaccagggaaaactgttttctctagtacccctccagcgttgataagtgtatgcctagctaaggcatt |
47127497 |
T |
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| Q |
214 |
tatatgcattgtatccttgaaatgtggcttcaagagcttatgaattggatgaagaagact |
273 |
Q |
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| T |
47127498 |
tatatgcattgtatccttgaaatgtggcttcaagagcttatgaattggatgaagaagact |
47127557 |
T |
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