View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17260_high_93 (Length: 234)
Name: NF17260_high_93
Description: NF17260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17260_high_93 |
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Alignment Details
Target: chr1 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 43 - 221
Target Start/End: Original strand, 41692371 - 41692554
Alignment:
| Q |
43 |
gattcaatctcttataaaatatttaaaaaatgatgtccaacatgcacgtaaagaaaaagtgacatctgacatacatgtcaacttg-tttttgtccaaata |
141 |
Q |
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| T |
41692371 |
gattcaatctcttataaaatatttaaaaaattatgtccaacatgcacgtaaagaaaaagtgacgtctgacatacatgtcaacttgttttttgtccaaata |
41692470 |
T |
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| Q |
142 |
acatcttccaaacaacaaaa----atatgcccccttcagacaatttgattatgattgaagtgctagggctcaaatagaaatatt |
221 |
Q |
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| T |
41692471 |
acatcttccaaacaacaaaaatatatatgccccttccagacaatttgattatgattgaagtgctagggctcaaatagaaatatt |
41692554 |
T |
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