View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17260_low_10 (Length: 563)

Name: NF17260_low_10
Description: NF17260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17260_low_10
NF17260_low_10
[»] chr7 (65 HSPs)
chr7 (40-130)||(38238823-38238913)
chr7 (40-130)||(25079246-25079336)
chr7 (36-125)||(29498827-29498916)
chr7 (24-130)||(27554536-27554642)
chr7 (22-130)||(1706826-1706934)
chr7 (42-125)||(45000614-45000697)
chr7 (35-125)||(22106711-22106801)
chr7 (36-130)||(34703450-34703544)
chr7 (36-130)||(40416913-40417007)
chr7 (35-125)||(40529550-40529640)
chr7 (38-125)||(24936542-24936629)
chr7 (29-123)||(22281443-22281537)
chr7 (40-101)||(46943955-46944016)
chr7 (40-92)||(25079218-25079270)
chr7 (40-130)||(716244-716335)
chr7 (40-102)||(18234412-18234474)
chr7 (18-108)||(6455610-6455700)
chr7 (43-125)||(21387620-21387702)
chr7 (172-226)||(28893787-28893841)
chr7 (77-130)||(4406456-4406509)
chr7 (38-95)||(7430958-7431015)
chr7 (40-92)||(716311-716363)
chr7 (40-91)||(22106678-22106729)
chr7 (40-91)||(40529622-40529673)
chr7 (29-91)||(29498783-29498845)
chr7 (40-106)||(41872114-41872180)
chr7 (36-90)||(46944016-46944070)
chr7 (29-112)||(2456336-2456419)
chr7 (57-125)||(3498322-3498390)
chr7 (24-128)||(7295097-7295201)
chr7 (40-88)||(34703524-34703572)
chr7 (40-91)||(38238794-38238846)
chr7 (40-88)||(40416987-40417035)
chr7 (43-118)||(12274823-12274898)
chr7 (40-91)||(45000679-45000730)
chr7 (43-125)||(2943226-2943308)
chr7 (40-90)||(4406428-4406478)
chr7 (40-130)||(27554508-27554598)
chr7 (41-123)||(43067037-43067118)
chr7 (24-125)||(31319560-31319661)
chr7 (31-88)||(43130235-43130292)
chr7 (38-90)||(22281522-22281574)
chr7 (43-119)||(24280871-24280947)
chr7 (43-123)||(26385639-26385719)
chr7 (57-125)||(28003222-28003290)
chr7 (57-125)||(37066226-37066294)
chr7 (57-125)||(46477161-46477229)
chr7 (18-121)||(28949323-28949426)
chr7 (43-125)||(2533954-2534036)
chr7 (40-90)||(21387587-21387637)
chr7 (40-106)||(34275202-34275268)
chr7 (36-125)||(9555304-9555393)
chr7 (23-108)||(10415000-10415085)
chr7 (60-125)||(33471521-33471586)
chr7 (40-88)||(1706914-1706962)
chr7 (41-121)||(2850989-2851068)
chr7 (40-108)||(4406090-4406158)
chr7 (43-115)||(7701202-7701274)
chr7 (41-125)||(15051095-15051179)
chr7 (57-125)||(19531997-19532065)
chr7 (43-115)||(25245197-25245269)
chr7 (57-125)||(27942353-27942421)
chr7 (41-125)||(30005920-30006003)
chr7 (57-125)||(37066210-37066278)
chr7 (57-125)||(48392894-48392962)
[»] chr3 (68 HSPs)
chr3 (36-123)||(36362650-36362737)
chr3 (23-130)||(21403891-21403997)
chr3 (35-130)||(22173801-22173896)
chr3 (30-125)||(52315434-52315529)
chr3 (40-130)||(51617342-51617432)
chr3 (23-130)||(29565103-29565210)
chr3 (40-130)||(41349671-41349761)
chr3 (40-130)||(51239282-51239372)
chr3 (23-121)||(52168277-52168375)
chr3 (40-121)||(38455213-38455294)
chr3 (40-131)||(22099790-22099881)
chr3 (60-130)||(52931680-52931750)
chr3 (60-123)||(29512162-29512225)
chr3 (40-123)||(29720087-29720170)
chr3 (40-130)||(17552488-17552578)
chr3 (24-130)||(33412504-33412610)
chr3 (40-130)||(42449144-42449234)
chr3 (40-130)||(50260972-50261063)
chr3 (35-123)||(32759012-32759100)
chr3 (42-130)||(33412478-33412566)
chr3 (40-92)||(42449116-42449168)
chr3 (40-91)||(50260944-50260995)
chr3 (21-91)||(52931751-52931821)
chr3 (36-91)||(38455172-38455227)
chr3 (40-91)||(52315401-52315452)
chr3 (43-125)||(12744945-12745027)
chr3 (41-123)||(37492393-37492475)
chr3 (18-91)||(41349738-41349812)
chr3 (24-125)||(10872667-10872768)
chr3 (33-130)||(18939967-18940070)
chr3 (38-105)||(22153123-22153190)
chr3 (36-91)||(29565187-29565242)
chr3 (40-91)||(51239254-51239305)
chr3 (40-91)||(51617409-51617460)
chr3 (36-91)||(52168361-52168416)
chr3 (30-91)||(18940047-18940108)
chr3 (23-91)||(21403974-21404040)
chr3 (22-91)||(36362597-36362666)
chr3 (38-115)||(37897691-37897768)
chr3 (57-125)||(16127792-16127860)
chr3 (40-108)||(25881197-25881265)
chr3 (23-91)||(26367553-26367621)
chr3 (57-125)||(54680517-54680585)
chr3 (61-125)||(54726099-54726163)
chr3 (23-106)||(8439252-8439335)
chr3 (44-91)||(29512209-29512256)
chr3 (40-91)||(29720154-29720205)
chr3 (24-115)||(41253985-41254076)
chr3 (40-91)||(52931652-52931703)
chr3 (50-92)||(3972489-3972531)
chr3 (50-92)||(3994563-3994605)
chr3 (50-92)||(3997347-3997389)
chr3 (57-123)||(18480922-18480988)
chr3 (28-115)||(27102161-27102250)
chr3 (41-91)||(48895594-48895643)
chr3 (79-125)||(51060707-51060753)
chr3 (36-105)||(3074785-3074854)
chr3 (43-88)||(24075526-24075571)
chr3 (43-128)||(52215894-52215979)
chr3 (36-108)||(8504911-8504983)
chr3 (60-125)||(17004989-17005056)
chr3 (43-115)||(21217180-21217252)
chr3 (57-125)||(21659166-21659234)
chr3 (36-88)||(29241561-29241613)
chr3 (57-125)||(34935582-34935650)
chr3 (41-125)||(40326482-40326565)
chr3 (57-125)||(46739335-46739403)
chr3 (61-125)||(52638077-52638141)
[»] scaffold0007 (2 HSPs)
scaffold0007 (36-130)||(246834-246928)
scaffold0007 (40-91)||(246806-246857)
[»] chr8 (45 HSPs)
chr8 (40-130)||(40098771-40098861)
chr8 (36-123)||(13211285-13211372)
chr8 (23-130)||(14381277-14381384)
chr8 (31-130)||(26014608-26014706)
chr8 (41-123)||(9056033-9056115)
chr8 (40-130)||(7377593-7377684)
chr8 (40-123)||(13228881-13228964)
chr8 (40-130)||(29451742-29451828)
chr8 (22-100)||(1739634-1739712)
chr8 (35-123)||(9808380-9808466)
chr8 (36-130)||(15285660-15285754)
chr8 (36-130)||(15466029-15466123)
chr8 (50-123)||(37716120-37716193)
chr8 (40-91)||(14381249-14381300)
chr8 (40-91)||(40098838-40098889)
chr8 (74-123)||(11692093-11692142)
chr8 (21-125)||(2296466-2296570)
chr8 (40-91)||(26014580-26014631)
chr8 (20-88)||(5888417-5888485)
chr8 (43-91)||(7377568-7377616)
chr8 (23-91)||(9056099-9056167)
chr8 (43-115)||(10117024-10117096)
chr8 (57-125)||(42631807-42631875)
chr8 (40-91)||(33574865-33574916)
chr8 (51-121)||(15715375-15715445)
chr8 (43-123)||(10934649-10934729)
chr8 (40-108)||(31810395-31810463)
chr8 (40-103)||(2810089-2810152)
chr8 (36-91)||(9808450-9808505)
chr8 (36-91)||(13211246-13211301)
chr8 (31-125)||(3225824-3225918)
chr8 (43-125)||(5888350-5888432)
chr8 (18-72)||(27502998-27503052)
chr8 (47-125)||(28882682-28882760)
chr8 (40-106)||(31505101-31505167)
chr8 (57-123)||(40716774-40716840)
chr8 (35-88)||(9015897-9015950)
chr8 (30-119)||(27502902-27502991)
chr8 (44-125)||(34326260-34326341)
chr8 (57-125)||(8568848-8568916)
chr8 (43-91)||(11295678-11295726)
chr8 (40-92)||(11692059-11692110)
chr8 (79-123)||(18603504-18603548)
chr8 (57-125)||(27781928-27781996)
chr8 (86-130)||(33574845-33574888)
[»] chr5 (60 HSPs)
chr5 (36-130)||(8961258-8961352)
chr5 (36-130)||(15712128-15712222)
chr5 (41-130)||(19531313-19531402)
chr5 (41-130)||(42013861-42013950)
chr5 (40-130)||(37944641-37944731)
chr5 (40-121)||(43446870-43446951)
chr5 (40-130)||(3851402-3851492)
chr5 (40-130)||(11262367-11262457)
chr5 (40-130)||(13311213-13311303)
chr5 (40-130)||(26300150-26300240)
chr5 (40-130)||(23914880-23914970)
chr5 (33-130)||(38835529-38835626)
chr5 (40-130)||(35969139-35969230)
chr5 (40-130)||(37870056-37870146)
chr5 (40-125)||(13157377-13157461)
chr5 (24-91)||(3851358-3851425)
chr5 (24-91)||(15712199-15712266)
chr5 (64-125)||(21945415-21945476)
chr5 (41-125)||(14064854-14064937)
chr5 (24-91)||(19531379-19531446)
chr5 (40-91)||(23914852-23914903)
chr5 (40-91)||(26300122-26300173)
chr5 (74-125)||(35172475-35172526)
chr5 (23-92)||(37944596-37944665)
chr5 (36-88)||(13157340-13157392)
chr5 (40-91)||(11262339-11262390)
chr5 (40-91)||(42013833-42013884)
chr5 (23-91)||(13311169-13311236)
chr5 (57-125)||(15966000-15966068)
chr5 (57-125)||(21152616-21152684)
chr5 (57-125)||(21159751-21159819)
chr5 (57-125)||(21163558-21163626)
chr5 (57-125)||(42247596-42247664)
chr5 (24-91)||(8961214-8961281)
chr5 (36-100)||(11172048-11172114)
chr5 (40-125)||(25773254-25773339)
chr5 (29-125)||(3100405-3100501)
chr5 (57-125)||(7336899-7336967)
chr5 (40-88)||(11795747-11795795)
chr5 (43-114)||(71273-71344)
chr5 (36-91)||(13356215-13356270)
chr5 (39-125)||(29807089-29807172)
chr5 (35-90)||(35969208-35969263)
chr5 (74-125)||(37637314-37637365)
chr5 (75-125)||(14416450-14416500)
chr5 (57-131)||(26168226-26168300)
chr5 (34-115)||(1100062-1100143)
chr5 (60-125)||(14571052-14571117)
chr5 (41-121)||(5226067-5226146)
chr5 (21-85)||(5259469-5259533)
chr5 (40-88)||(6763778-6763826)
chr5 (36-88)||(12646585-12646637)
chr5 (57-125)||(15965984-15966052)
chr5 (41-121)||(18003870-18003949)
chr5 (57-125)||(18942014-18942082)
chr5 (36-108)||(20518179-20518250)
chr5 (41-125)||(25408555-25408639)
chr5 (40-108)||(26141816-26141884)
chr5 (57-125)||(37684998-37685066)
chr5 (41-125)||(43585539-43585622)
[»] chr6 (40 HSPs)
chr6 (41-130)||(21998078-21998167)
chr6 (40-130)||(17773540-17773630)
chr6 (40-130)||(21506474-21506564)
chr6 (18-130)||(30397764-30397875)
chr6 (39-112)||(28577658-28577731)
chr6 (40-125)||(30460624-30460709)
chr6 (40-123)||(17268059-17268142)
chr6 (36-92)||(21506540-21506596)
chr6 (23-98)||(8363610-8363685)
chr6 (29-91)||(30460691-30460753)
chr6 (28-102)||(31536381-31536455)
chr6 (24-130)||(21998034-21998140)
chr6 (40-108)||(14310582-14310650)
chr6 (58-125)||(6047985-6048052)
chr6 (40-91)||(17773512-17773563)
chr6 (40-91)||(30397736-30397787)
chr6 (40-91)||(31536322-31536373)
chr6 (43-119)||(26527240-26527316)
chr6 (24-96)||(29419860-29419932)
chr6 (40-108)||(31398237-31398305)
chr6 (40-91)||(4844300-4844351)
chr6 (40-91)||(17268024-17268075)
chr6 (58-125)||(21478582-21478649)
chr6 (23-125)||(3012404-3012506)
chr6 (43-85)||(4844359-4844401)
chr6 (75-125)||(5301961-5302011)
chr6 (40-106)||(6560668-6560734)
chr6 (57-123)||(7418903-7418969)
chr6 (43-125)||(14173404-14173486)
chr6 (43-125)||(14177940-14178022)
chr6 (60-125)||(3212272-3212337)
chr6 (58-119)||(3673822-3673883)
chr6 (18-91)||(7158245-7158318)
chr6 (43-88)||(13281548-13281593)
chr6 (24-88)||(10258385-10258449)
chr6 (57-125)||(10731501-10731569)
chr6 (57-121)||(10731521-10731585)
chr6 (41-121)||(12349828-12349907)
chr6 (51-115)||(15467627-15467691)
chr6 (24-108)||(28554942-28555026)
[»] chr4 (55 HSPs)
chr4 (40-125)||(13689547-13689632)
chr4 (40-123)||(5418526-5418609)
chr4 (42-130)||(24941150-24941238)
chr4 (42-130)||(52817580-52817668)
chr4 (40-125)||(10031565-10031650)
chr4 (23-91)||(5418593-5418661)
chr4 (40-92)||(52817644-52817696)
chr4 (22-89)||(55087791-55087858)
chr4 (40-101)||(29223953-29224014)
chr4 (40-91)||(24941122-24941173)
chr4 (31-130)||(38539480-38539579)
chr4 (40-97)||(10031508-10031564)
chr4 (60-125)||(20542834-20542899)
chr4 (40-92)||(5281212-5281264)
chr4 (57-125)||(51126149-51126217)
chr4 (24-91)||(19934716-19934783)
chr4 (43-125)||(4406255-4406337)
chr4 (43-125)||(29006849-29006931)
chr4 (79-125)||(40881477-40881523)
chr4 (86-130)||(5281192-5281236)
chr4 (40-108)||(14451018-14451086)
chr4 (31-123)||(19878288-19878380)
chr4 (40-108)||(49481941-49482009)
chr4 (57-125)||(51126133-51126201)
chr4 (43-91)||(54164891-54164939)
chr4 (24-112)||(54508164-54508252)
chr4 (47-130)||(6243643-6243726)
chr4 (74-125)||(42013190-42013241)
chr4 (31-89)||(3504079-3504137)
chr4 (40-90)||(13689615-13689665)
chr4 (57-123)||(13743904-13743970)
chr4 (40-86)||(44156083-44156129)
chr4 (43-125)||(52281132-52281214)
chr4 (35-88)||(3511715-3511768)
chr4 (27-108)||(4044359-4044440)
chr4 (43-92)||(6462726-6462775)
chr4 (24-85)||(14450952-14451013)
chr4 (41-114)||(15133840-15133912)
chr4 (60-125)||(34827516-34827581)
chr4 (36-105)||(39533820-39533889)
chr4 (40-88)||(6243706-6243754)
chr4 (57-125)||(9968329-9968397)
chr4 (43-91)||(19934652-19934700)
chr4 (36-88)||(20294512-20294564)
chr4 (57-125)||(23329398-23329466)
chr4 (57-125)||(23710879-23710947)
chr4 (57-125)||(25700485-25700553)
chr4 (57-125)||(25856038-25856106)
chr4 (41-125)||(27080087-27080169)
chr4 (41-121)||(31808335-31808414)
chr4 (41-113)||(31860664-31860735)
chr4 (61-125)||(40952571-40952635)
chr4 (57-125)||(42013174-42013242)
chr4 (41-121)||(45861053-45861132)
chr4 (43-91)||(54164827-54164875)
[»] chr1 (79 HSPs)
chr1 (36-123)||(31008305-31008392)
chr1 (21-130)||(3384215-3384324)
chr1 (40-130)||(6065472-6065562)
chr1 (36-122)||(14418104-14418190)
chr1 (40-130)||(15439873-15439963)
chr1 (40-130)||(34658397-34658487)
chr1 (41-130)||(8257955-8258044)
chr1 (23-125)||(4060215-4060317)
chr1 (40-130)||(27206798-27206888)
chr1 (40-130)||(37734784-37734874)
chr1 (40-123)||(40262479-40262562)
chr1 (40-130)||(639838-639928)
chr1 (40-130)||(2349767-2349857)
chr1 (43-125)||(35367522-35367604)
chr1 (40-130)||(48022634-48022724)
chr1 (40-130)||(4602655-4602745)
chr1 (40-130)||(33604002-33604092)
chr1 (50-123)||(2352916-2352989)
chr1 (23-91)||(639793-639861)
chr1 (74-130)||(5856402-5856458)
chr1 (40-91)||(31008270-31008321)
chr1 (40-91)||(33604069-33604120)
chr1 (40-91)||(48022606-48022657)
chr1 (40-89)||(37734853-37734902)
chr1 (40-91)||(6065539-6065590)
chr1 (40-91)||(8258021-8258072)
chr1 (24-91)||(19175666-19175733)
chr1 (40-90)||(27206770-27206820)
chr1 (35-91)||(2352973-2353029)
chr1 (35-91)||(5856435-5856491)
chr1 (21-125)||(34953888-34953992)
chr1 (29-125)||(50550163-50550259)
chr1 (40-91)||(17490499-17490550)
chr1 (40-91)||(23944048-23944099)
chr1 (43-97)||(52923395-52923449)
chr1 (24-121)||(8465974-8466071)
chr1 (38-91)||(15439940-15439993)
chr1 (60-125)||(31909793-31909858)
chr1 (40-108)||(6283596-6283664)
chr1 (43-123)||(33765833-33765913)
chr1 (41-125)||(37255170-37255253)
chr1 (57-125)||(47011288-47011356)
chr1 (36-108)||(49586150-49586222)
chr1 (40-90)||(2349835-2349886)
chr1 (40-91)||(4060182-4060233)
chr1 (24-91)||(4602722-4602789)
chr1 (40-91)||(5431418-5431469)
chr1 (43-125)||(5595434-5595516)
chr1 (24-119)||(6735748-6735843)
chr1 (57-124)||(33738208-33738275)
chr1 (36-91)||(34658464-34658519)
chr1 (35-125)||(1035893-1035983)
chr1 (57-131)||(5852716-5852790)
chr1 (41-91)||(15351793-15351843)
chr1 (40-106)||(36040157-36040223)
chr1 (57-131)||(46517983-46518057)
chr1 (23-92)||(3384300-3384369)
chr1 (43-84)||(3549793-3549834)
chr1 (31-92)||(14967302-14967363)
chr1 (41-121)||(435219-435298)
chr1 (21-89)||(1035967-1036035)
chr1 (41-125)||(4682950-4683033)
chr1 (57-125)||(15278593-15278661)
chr1 (41-125)||(15351727-15351811)
chr1 (87-123)||(21321376-21321412)
chr1 (57-125)||(25378285-25378353)
chr1 (57-125)||(27549089-27549157)
chr1 (57-125)||(31909777-31909845)
chr1 (57-125)||(35049976-35050044)
chr1 (58-90)||(36535718-36535750)
chr1 (39-91)||(37255137-37255188)
chr1 (61-125)||(38468730-38468794)
chr1 (41-121)||(38847350-38847429)
chr1 (41-121)||(42761246-42761325)
chr1 (36-88)||(42761460-42761512)
chr1 (24-108)||(45115165-45115249)
chr1 (57-125)||(45239019-45239087)
chr1 (41-121)||(45925292-45925371)
chr1 (57-125)||(52253566-52253634)
[»] chr2 (60 HSPs)
chr2 (36-130)||(43426667-43426761)
chr2 (40-130)||(34248454-34248544)
chr2 (40-130)||(3887872-3887962)
chr2 (40-130)||(38594383-38594473)
chr2 (40-130)||(38597979-38598069)
chr2 (36-121)||(38618146-38618231)
chr2 (40-130)||(1981024-1981113)
chr2 (40-130)||(5574121-5574211)
chr2 (40-130)||(30902284-30902374)
chr2 (47-130)||(3714252-3714335)
chr2 (40-123)||(6566961-6567044)
chr2 (40-130)||(22373621-22373711)
chr2 (36-130)||(25278181-25278275)
chr2 (40-124)||(7837096-7837180)
chr2 (40-91)||(5574188-5574239)
chr2 (38-121)||(8383233-8383316)
chr2 (35-90)||(3887839-3887894)
chr2 (36-119)||(15859601-15859684)
chr2 (58-125)||(20504287-20504354)
chr2 (40-91)||(30902351-30902402)
chr2 (40-90)||(34248426-34248476)
chr2 (43-123)||(1961355-1961435)
chr2 (57-125)||(4898193-4898261)
chr2 (57-125)||(4945587-4945655)
chr2 (57-125)||(20195317-20195385)
chr2 (40-88)||(20504254-20504302)
chr2 (36-108)||(21488088-21488160)
chr2 (21-88)||(38465870-38465937)
chr2 (40-91)||(38594355-38594406)
chr2 (40-91)||(38597951-38598002)
chr2 (40-91)||(43426639-43426690)
chr2 (43-125)||(21183371-21183453)
chr2 (43-108)||(4563925-4563990)
chr2 (43-88)||(26003516-26003561)
chr2 (36-125)||(38181767-38181856)
chr2 (61-125)||(4637051-4637115)
chr2 (61-125)||(9071237-9071301)
chr2 (61-125)||(10041574-10041638)
chr2 (40-91)||(22373688-22373740)
chr2 (43-90)||(27331838-27331885)
chr2 (50-125)||(40320153-40320228)
chr2 (40-90)||(3714224-3714274)
chr2 (57-123)||(5144296-5144362)
chr2 (29-123)||(7079370-7079464)
chr2 (43-125)||(26003449-26003531)
chr2 (43-125)||(38465803-38465885)
chr2 (79-128)||(37195093-37195142)
chr2 (43-115)||(3098180-3098252)
chr2 (41-121)||(15080886-15080965)
chr2 (57-125)||(17843979-17844047)
chr2 (43-115)||(25270910-25270982)
chr2 (57-125)||(29771746-29771814)
chr2 (36-88)||(32630413-32630465)
chr2 (61-125)||(37396236-37396300)
chr2 (31-91)||(40187321-40187381)
chr2 (43-115)||(40363233-40363305)
chr2 (43-115)||(41056942-41057014)
chr2 (41-121)||(42230535-42230614)
chr2 (42-90)||(44274620-44274668)
chr2 (41-121)||(44402132-44402211)
[»] scaffold0039 (2 HSPs)
scaffold0039 (40-130)||(54399-54489)
scaffold0039 (35-91)||(54466-54522)
[»] scaffold0024 (2 HSPs)
scaffold0024 (40-130)||(120184-120274)
scaffold0024 (40-91)||(120156-120207)
[»] scaffold0536 (2 HSPs)
scaffold0536 (40-121)||(3998-4079)
scaffold0536 (23-91)||(3944-4012)
[»] scaffold0047 (2 HSPs)
scaffold0047 (18-130)||(61152-61263)
scaffold0047 (40-91)||(61240-61291)
[»] scaffold0027 (1 HSPs)
scaffold0027 (40-123)||(17178-17260)
[»] scaffold0009 (1 HSPs)
scaffold0009 (29-108)||(7657-7736)
[»] scaffold0036 (1 HSPs)
scaffold0036 (35-125)||(89604-89694)
[»] scaffold0050 (1 HSPs)
scaffold0050 (24-108)||(6274-6358)
[»] scaffold0172 (2 HSPs)
scaffold0172 (52-125)||(11628-11701)
scaffold0172 (52-125)||(11607-11680)
[»] scaffold0635 (1 HSPs)
scaffold0635 (61-125)||(5432-5496)
[»] scaffold0121 (1 HSPs)
scaffold0121 (41-121)||(17482-17561)


Alignment Details
Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 38238913 - 38238823
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  38238913 taatataagcaaaaatctactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgta 38238823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 25079336 - 25079246
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||| ||||||||| ||||    
T  25079336 taatataaacaaaaatctactttttagatacattcaattaatgatgtatgtgacatataataaggatcacatacatcattaattgaatgta 25079246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 29498916 - 29498827
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||||||||||| | |||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  29498916 tcattaatataagcaaaaatccattttttagatacatttaattaattatgtatgtgacatataataaagaccacatacatcattaattga 29498827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 27554642 - 27554536
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||| ||||| |||| |||||||||||||||| ||||||| | |||||| ||||||||||||||||||| |||||||||||| ||||||||| |||||||    
T  27554642 tacaccctccgatcactaatataagcaaaaatttacttttaaaatacattcaattaatgatgtatgtgatatataataaagatcacatacatcattaatt 27554543  T
Q  124 gagtgta 130  Q
    || ||||    
T  27554542 gaatgta 27554536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 1706826 - 1706934
Alignment:
Q  22 agtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    |||||| |||||  ||| ||||||||| |||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||    
T  1706826 agtacaccctccggtcactaatataagtaaaaatttattttttagatacattcaattaatgatgtatgtgacatataataaagaccatatacatcattaa 1706925  T
Q  122 ttgagtgta 130  Q
     ||| ||||    
T  1706926 atgaatgta 1706934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 45000614 - 45000697
Alignment:
Q  42 atataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||| || ||||||    
T  45000614 atataagcaaaaatctattttctagatacattcaattaatgatgtgtgtgacatataataaagaccacatacatcatcaattga 45000697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 22106801 - 22106711
Alignment:
Q  35 atcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||| |||||||| ||||| |  | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22106801 atcactaatataaacaaaatttcattttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattga 22106711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 34703450 - 34703544
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||||||  ||  ||||||||||| |||||||||||| |||||||||||||||||||||| |||||| ||||||||| ||||    
T  34703450 tcattaatataagcaaaaattcacaatttagatacattcaattaatgatgcatgtgacatataataaagaccatatacatcattaattgaatgta 34703544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 40416913 - 40417007
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||||||  ||  ||||||||||| |||||||||||| |||||||||||||||||||||| |||||| ||||||||| ||||    
T  40416913 tcattaatataagcaaaaattcacaatttagatacattcaattaatgatgcatgtgacatataataaagaccatatacatcattaattgaatgta 40417007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 40529550 - 40529640
Alignment:
Q  35 atcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||| |||||||| ||||| |  | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40529550 atcactaatataaacaaaatttcattttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattga 40529640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 24936542 - 24936629
Alignment:
Q  38 attaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| |||||||  ||||||| ||||||| |||||||| |||| |||||||||||||||||||||||||||| |||||||||    
T  24936542 attaatataaacaaaaattcactttttggatacattcaattaattatgtctgtgacatataataaagaccacatacatcattaattga 24936629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 22281443 - 22281537
Alignment:
Q  29 cctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    ||||| |||| |||||||| |||||||||| |||||||||| || ||||||||||||||| ||||||||||||||||  |||| ||| |||||||    
T  22281443 cctccgatcactaatataaacaaaaatctaatttttagatatattcaattaatgatgtatatgacatataataaagagtacattcatcattaatt 22281537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 46943955 - 46944016
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataata 101  Q
    |||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  46943955 taatataaacaaaaatccactttttagatacattcaattaatgatgtatgtgacatataata 46944016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 25079218 - 25079270
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtga 92  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25079218 taatataagcaaaaatctactttttagatacattcaattaatgatgtatgtga 25079270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 716244 - 716335
Alignment:
Q  40 taatataagcaaaaatctactttt-tagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||| |||||| || |||| ||||||||| ||||||||||||||| ||||||| |||||||| ||||||||| ||||||||| ||||    
T  716244 taatataagtaaaaatttatttttttagatacattcaattaatgatgtatatgacatagaataaagatcacatacatcattaattgaatgta 716335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 18234474 - 18234412
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataa 102  Q
    |||||||| ||||||| || ||||||||||||| |||||||||||||||||||||||||||||    
T  18234474 taatataaacaaaaatttaatttttagatacattcaattaatgatgtatgtgacatataataa 18234412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 6455700 - 6455610
Alignment:
Q  18 aacaagtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    ||||| |||| ||||| |||| |||||||||||||||||||| |||||| | ||| || |||||||||||||||   ||||||||||||||    
T  6455700 aacaaatacaccctccgatcactaatataagcaaaaatctacattttaggttcattcatttaatgatgtatgtggtctataataaagacca 6455610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 21387702 - 21387620
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||| | |||||||||||| |||  ||| |||||||||||||  ||||||||||||| |||||||| |||||||||    
T  21387702 tataagcaaaattttactttttagattcatttaataaatgatgtatgtggtatataataaagactacatacatcattaattga 21387620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 28893841 - 28893787
Alignment:
Q  172 aaccatcaaagtatctgaagcagtatgtttaatcccaaccttgagggaaaacctg 226  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||    
T  28893841 aaccatcaaggtatctcaagcagtatgttttatcccaaccttgagggaaaacctg 28893787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 4406509 - 4406456
Alignment:
Q  77 ttaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| ||||    
T  4406509 ttaatgatgtatgtgacatataataaagacaacatacatcattaattgaatgta 4406456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 7431015 - 7430958
Alignment:
Q  38 attaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacat 95  Q
    ||||||||||  ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  7431015 attaatataaataaaaaactactttttagatacattcaattaatgatgtatgtgacat 7430958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 716363 - 716311
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtga 92  Q
    |||||||||||||||| || ||||||||||||| |||||||||||||||||||    
T  716363 taatataagcaaaaatttaatttttagatacattcaattaatgatgtatgtga 716311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 22106678 - 22106729
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||||||||    
T  22106678 taatataagcaaaaatctattttttagatatattcaattaatgatgtatgtg 22106729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 40529673 - 40529622
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||||||||    
T  40529673 taatataagcaaaaatctattttttagatatattcaattaatgatgtatgtg 40529622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 29498783 - 29498845
Alignment:
Q  29 cctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||| |||| ||||||||||||||||| || ||||||||| || ||||||||||||||||||    
T  29498783 cctccgatcaataatataagcaaaaatccacattttagatatattcaattaatgatgtatgtg 29498845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 41872180 - 41872114
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagac 106  Q
    |||||||||||||||||||| |||||||| ||| || |||||||||||||||   ||||||||||||    
T  41872180 taatataagcaaaaatctacattttagattcattcatttaatgatgtatgtggtctataataaagac 41872114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 46944070 - 46944016
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgt 90  Q
    ||||||||||||| |||||| || ||||||||||||| |||||||||||||||||    
T  46944070 tcattaatataagtaaaaatttaatttttagatacattcaattaatgatgtatgt 46944016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 2456336 - 2456419
Alignment:
Q  29 cctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgt-gacatataataaagaccacata 112  Q
    ||||| |||| || |||||||||||||||||||||||| | |||  |||||||||||||||| ||||| ||||| ||||||||||    
T  2456336 cctccgatcactattataagcaaaaatctactttttaggttcattgaattaatgatgtatgtggacat-taatatagaccacata 2456419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 3498322 - 3498390
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||| ||| ||||||||||||||||||   |||||||  |||||||||||| |||||||||    
T  3498322 tactttttagattcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattga 3498390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 7295201 - 7295097
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||| ||||| ||||||| ||||| |||||||  || ||||| || |||  | | |||||||||||||| ||||||||||||||||| |||  |||||||    
T  7295201 tacaccctccgatcattattataaacaaaaattaacattttacattcatttattaaatgatgtatgtgatatataataaagaccacaaacaacattaatt 7295102  T
Q  124 gagtg 128  Q
    |||||    
T  7295101 gagtg 7295097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 34703572 - 34703524
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  34703572 taatataagcaaaaattcactttttagatacattcaattaatgatgtat 34703524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 38238794 - 38238846
Alignment:
Q  40 taatataagcaaaaatct-actttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  38238794 taatataagcaaaaatttcactttttagatacattcaattaatgatgtatgtg 38238846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 40417035 - 40416987
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  40417035 taatataagcaaaaattcactttttagatacattcaattaatgatgtat 40416987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 12274823 - 12274898
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattat 118  Q
    |||||||||||||| || |||||  | ||| |||| ||||||||||||| | ||||||| ||||||||||||||||    
T  12274823 tataagcaaaaatccacattttatgttcattcaataaatgatgtatgtggcctataatatagaccacatacattat 12274898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 45000730 - 45000679
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||||||||||| ||||||||||| |||| ||||| ||||||||||||    
T  45000730 taatataagcaaaaatgtactttttagacacattcaattgatgatgtatgtg 45000679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 2943226 - 2943308
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||||| || |||||||| ||| || | |||||||||||||   || ||||||||  ||||||||||||||||||    
T  2943226 tataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtctacaataaagagtacatacattattaattga 2943308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 4406428 - 4406478
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgt 90  Q
    ||||||| ||||||||  ||||||||||||||| |||||||||||||||||    
T  4406428 taatatatgcaaaaattcactttttagatacattcaattaatgatgtatgt 4406478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 27554508 - 27554598
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||  |||||| || ||||||||||||| |||||||||||||||||||  | || || | | ||||||||| ||||||||| ||||    
T  27554508 taatataaataaaaatttattttttagatacattcaattaatgatgtatgtgatctttattatatatcacatacatcattaattgaatgta 27554598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 43067037 - 43067118
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    ||||||||||||| | |||||||||| | ||| ||||||||||||||||||    |||||| ||||||||||||| |||||||    
T  43067037 aatataagcaaaatt-tactttttaggttcattcaattaatgatgtatgtggttcataatatagaccacatacatcattaatt 43067118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 31319661 - 31319560
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||| ||||| |||| || |||||| |||||| || ||||||||| ||| |||  ||||||||||||    |||||||||||||||||| || |||||||    
T  31319661 tacaccctccgatcactattataaggaaaaatatattttttagattcattcaaaaaatgatgtatgtagtctataataaagaccacatatatcattaatt 31319562  T
Q  124 ga 125  Q
    ||    
T  31319561 ga 31319560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 43130235 - 43130292
Alignment:
Q  31 tccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    ||||||||||| |||||  |||||||||| |||||||| ||| |||||||||||||||    
T  43130235 tccaatcattattataaataaaaatctacgttttagattcattcaattaatgatgtat 43130292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 22281574 - 22281522
Alignment:
Q  38 attaatataagcaaaaatctactttttagatacatccaattaatgatgtatgt 90  Q
    |||||||||||||||||| ||||||||| ||||||  ||||||||||| ||||    
T  22281574 attaatataagcaaaaatttactttttaaatacattgaattaatgatgaatgt 22281522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 24280947 - 24280871
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattatt 119  Q
    |||||| |||||||||| ||||| || ||| ||||||||||||||| | | || || || |||||||||||||||||    
T  24280947 tataagtaaaaatctacattttaaattcattcaattaatgatgtatataatatttattatagaccacatacattatt 24280871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 26385639 - 26385719
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    ||||| |||| || ||| |||||||| ||| |||| ||| |||||||||   ||||||||||||||||||||| |||||||    
T  26385639 tataaacaaagatttacattttagattcattcaataaattatgtatgtggtctataataaagaccacatacatcattaatt 26385719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 28003290 - 28003222
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| |||||||||||||||||||  |||||||  |||||||||||| | |||||||    
T  28003290 tactttttaggttcattcaattaatgatgtatgtgatttataatatggaccacatacatcaataattga 28003222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 37066294 - 37066226
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||||||    |||||| ||||||||||||| |||||||||    
T  37066294 tactttttaggttcattcaattaatgatgtatgtggtccataatatagaccacatacatcattaattga 37066226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 46477161 - 46477229
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||||||   |||||||  |||||||||||| |||||||||    
T  46477161 tactttttaggttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattga 46477229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 28949426 - 28949323
Alignment:
Q  18 aacaagtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacatta 117  Q
    |||| ||||| |||||  ||| ||||||||||||||| |||| || ||| | ||| || |||||||||||||||   |||||||||||||| || ||| |    
T  28949426 aacatgtacaccctccggtcactaatataagcaaaaaactacattctaggttcattcatttaatgatgtatgtggtctataataaagaccatatgcatca 28949327  T
Q  118 ttaa 121  Q
    ||||    
T  28949326 ttaa 28949323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 2533954 - 2534036
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||| ||  ||||||||  || ||||  ||||||||||||   |||||||||||| | ||||||||||||||||    
T  2533954 tataagcaaaaatttatattttagatttattcaatagatgatgtatgtggtgtataataaagactatatacattattaattga 2534036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 21387587 - 21387637
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgt 90  Q
    ||||||||||||||||| | ||| ||||| ||| |||||||||||||||||    
T  21387587 taatataagcaaaaatccattttctagattcattcaattaatgatgtatgt 21387637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 34275202 - 34275268
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagac 106  Q
    ||||||||||||||| |||| |||||| | ||| || |||||||||||||||   ||||||||||||    
T  34275202 taatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataataaagac 34275268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 9555393 - 9555304
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||| ||||||||||| | ||| |||||||| ||| || | |||||||||||||   ||| |||||||| | |||||| |||||||||    
T  9555393 tcattattataagcaaaactttacattttagattcattcattaaatgatgtatgtggtttatgataaagactatatacatcattaattga 9555304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 10415085 - 10415000
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    ||||| ||||| |||| ||||||||||||||| |||  |||||  | ||| || |||||||||||||||   ||||||||||||||    
T  10415085 gtacaccctccgatcactaatataagcaaaaaactatattttatgttcattcatttaatgatgtatgtggtctataataaagacca 10415000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 33471521 - 33471586
Alignment:
Q  60 tttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||| ||| ||||||||||||||||||    ||| || ||||||||||||| |||||||||    
T  33471521 tttttagattcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattga 33471586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 1706962 - 1706914
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    ||||||||||||||||  | ||||||||||||| || ||||||||||||    
T  1706962 taatataagcaaaaattcattttttagatacattcatttaatgatgtat 1706914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 2850989 - 2851068
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||||||||||| || ||||||||| | ||| || ||| ||||||||||||   |||||| ||||||||||||| |||||    
T  2850989 aatataagcaaaattc-actttttaggttcattcatttagtgatgtatgtgattcataatatagaccacatacatcattaa 2851068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 4406090 - 4406158
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    ||||||||| ||||| |||| |||||| | ||| || |||||||||||||||   ||||||||||||||    
T  4406090 taatataagaaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataataaagacca 4406158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 7701202 - 7701274
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacat 115  Q
    ||||||||||||||||| |||||||| ||| || | ||||||||||| |   ||||||| |||| ||||||||    
T  7701202 tataagcaaaaatctacattttagattcattcattaaatgatgtatgcggtttataatacagactacatacat 7701274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 15051095 - 15051179
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||||| ||  |||||||||||| |||| |||||||||| |    || |||||||  ||||||||||||| |||||    
T  15051095 aatataagcaaaaatttatgttttagatacattcaataaatgatgtatattgtctacaataaaggtcacatacattatttattga 15051179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 19532065 - 19531997
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| |||||||||||||||||    |||||||  |||||||||||| |||||||||    
T  19532065 tactttttaggttcattcaattaatgatgtatgtagtttataatatggaccacatacatcattaattga 19531997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 25245269 - 25245197
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacat 115  Q
    |||||||||||||| || |||||||| ||| || | |||||||||||||   || ||||||||| ||||||||    
T  25245269 tataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtctacaataaagactacatacat 25245197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 27942353 - 27942421
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||| ||| ||||||||||||||| |||   ||| || | ||||||||||| |||||||||    
T  27942353 tactttttagattcattcaattaatgatgtatatgatccatattataaaccacatacatcattaattga 27942421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 30006003 - 30005920
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||| |  ||||||||| | ||| |||||||||||||||||||   ||| || ||||||||||| | |||||||||    
T  30006003 aatataagcaaaattg-actttttaggttcattcaattaatgatgtatgtgattcatattatagaccacatacgtcattaattga 30005920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 37066210 - 37066278
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||||||   |||| ||  |||||||||||| |||||||||    
T  37066210 tactttttaggttcattcaattaatgatgtatgtggtctatattatggaccacatacatcattaattga 37066278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 48392894 - 48392962
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||| |||  ||||| ||||||||||||   |||||| | ||||||||||| |||||||||    
T  48392894 tactttttagattcatttaattagtgatgtatgtgattcataatatataccacatacatcattaattga 48392962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 7e-35; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 36362737 - 36362650
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  36362737 tcattaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtgacatataataaggaccacatacatcattaatt 36362650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 21403891 - 21403997
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaat 122  Q
    ||||| ||||| |||| |||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21403891 gtacatcctccgatcactaatataaacaaaaatctactttttagata-attcaattaatgatgtatgtgacatataataaagaccacatacatcattaat 21403989  T
Q  123 tgagtgta 130  Q
    ||| ||||    
T  21403990 tgaatgta 21403997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 22173801 - 22173896
Alignment:
Q  35 atcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| || |||||| ||||||||||| ||||    
T  22173801 atcattaatataagcaaaaatctacattttagatacattcaattaatgatgtatgtgacatataataaaaactacatactttattaattgaatgta 22173896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 52315529 - 52315434
Alignment:
Q  30 ctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||| |||| || |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  52315529 ctccgatcactagtataagcaaaaatccactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattga 52315434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 51617342 - 51617432
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  51617342 taatataaccaaaaatccactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacaacattaattgaatgta 51617432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 29565103 - 29565210
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaat 122  Q
    ||||| |||||  ||| ||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||    
T  29565103 gtacaccctccggtcactaatataagcaaaaatcaattttttagatacatttaattaatgatgtatgtgacatataataaagaccacatatatcattaat 29565202  T
Q  123 tgagtgta 130  Q
    ||| ||||    
T  29565203 tgaatgta 29565210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 41349671 - 41349761
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||  |||||| | |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  41349671 taatataagcaaaaattcacttttaaaatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgta 41349761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 51239372 - 51239282
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| || |||| |||| ||||    
T  51239372 taatataagcaaaaatctattttttagatacattcaattaatgatgtatgtgacatataataaggaccacatatatcattagttgaatgta 51239282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 52168277 - 52168375
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||| |||||  ||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||| |||||    
T  52168277 gtacaccctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgtatgtggcatataataaagaccacatacatcattaa 52168375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 38455294 - 38455213
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    |||||||| ||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  38455294 taatataaacaaaaatttactttttagatacatttaattaatgatgtatgtgacatataataaagaccacatacatcattaa 38455213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 22099790 - 22099881
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgtac 131  Q
    |||| ||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || |||||||| ||||||||| |||||    
T  22099790 taatttaaacaaaaatctactttttagatacattcaattaataatgtatgtgacatataataaaaactacatacatcattaattgaatgtac 22099881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 52931750 - 52931680
Alignment:
Q  60 tttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  52931750 tttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgta 52931680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 29512162 - 29512225
Alignment:
Q  60 tttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29512162 tttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaatt 29512225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 29720087 - 29720170
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||| |||||||| ||||||||||| ||| |||||| |||| |||||||||||||||||||||||||||||| |||||||    
T  29720087 taatataatcaaaaatccactttttagatgcattcaattattgatatatgtgacatataataaagaccacatacatcattaatt 29720170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 17552488 - 17552578
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||  |||||| | |||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||| ||||    
T  17552488 taatataagcaaaaattcacttttaaaatacattcaattaataatgtatgtgacatataataaagaccacatacatcgttaattgaatgta 17552578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 33412610 - 33412504
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||| |||||| ||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||  || |||  ||| ||||||||| |||||||    
T  33412610 tacaccctccagtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtgatctaaaatttagatcacatacatcattaatt 33412511  T
Q  124 gagtgta 130  Q
    || ||||    
T  33412510 gaatgta 33412504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 42449234 - 42449144
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||| ||||||| || |||||| |||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||||||| ||||    
T  42449234 taatataaacaaaaatatattttttaaatacattcaattaatgatgaatgtgacatataataaagatcacatacatcattaattgaatgta 42449144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 50261063 - 50260972
Alignment:
Q  40 taatataagcaaaaatct-actttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||||||||  | |||||| |||||||| || |||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  50261063 taatataagcaaaaaattcacttttaagatacattcatttaaggatgtatgtgacatataataaagaccacatacatcattaattgaatgta 50260972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 32759100 - 32759012
Alignment:
Q  35 atcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||| ||||||||  |||||| ||||||||||||| ||  |||||||||| ||||||| |||||||||||||||| ||||| |||||||    
T  32759100 atcactaatataaataaaaatttactttttagatatatttaattaatgatatatgtgatatataataaagaccacgtacatcattaatt 32759012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 33412478 - 33412566
Alignment:
Q  42 atataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||  || | |  ||| ||||||||| ||||||||| ||||    
T  33412478 atataagcaaaaatccactttttagatacattcaattaatgatgtatgtgatctaaattttagatcacatacatcattaattgaatgta 33412566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 42449116 - 42449168
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtga 92  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  42449116 taatataagcaaaaatccactttttagatacattcaattaatgatgtatgtga 42449168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 50260944 - 50260995
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  50260944 taatataagcaaaaatccactttttagatacattcaattaatgatgtatgtg 50260995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 52931821 - 52931751
Alignment:
Q  21 aagtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||| |||||  ||| | ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  52931821 aagtacaccctccggtcactgatataagtaaaaatctactttttagatacattcaattaatgatgtatgtg 52931751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 38455172 - 38455227
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||||||| |||||||||||||||  | |||||||||||||||    
T  38455172 tcattaatataagcaaaaatccactttttagatacattaatttaatgatgtatgtg 38455227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 52315401 - 52315452
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||||    
T  52315401 taatataagcaaaaatccactttttagatatattcaattaatgatgtatgtg 52315452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 12745027 - 12744945
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||||  || |||||||||||| || | |||||||||||||   |||||||||||||| |||||| |||||||||    
T  12745027 tataagcaaaaattaacattttagatacattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattga 12744945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 37492393 - 37492475
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||  |||||| || ||||||||||||| ||||||| ||||||| |||||||||||||||||  |||| || |||||||    
T  37492393 aatataaataaaaatttattttttagatacattcaattaacgatgtatatgacatataataaagacggcatatatcattaatt 37492475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 41349812 - 41349738
Alignment:
Q  18 aacaagtacaacctccaatcattaatataagcaaaaatctacttttt-agatacatccaattaatgatgtatgtg 91  Q
    |||||||||| |||||  ||| ||||||||||||||||| | ||||| |||||||| ||||||||||||||||||    
T  41349812 aacaagtacaccctccggtcactaatataagcaaaaatccatttttttagatacattcaattaatgatgtatgtg 41349738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 10872667 - 10872768
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||| |||||| ||| || |||||||||||||| |  ||||| || ||| || | ||||||||||||||  |||||||||||||| |||||| |||||||    
T  10872667 tacaccctccagtcactattataagcaaaaatcaatattttaaattcattcattaaatgatgtatgtgatttataataaagaccatatacatcattaatt 10872766  T
Q  124 ga 125  Q
    ||    
T  10872767 ga 10872768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 18939967 - 18940070
Alignment:
Q  33 caatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataata------aagaccacatacattattaattgag 126  Q
    |||||| ||||||||| ||||||  | |||||| ||||||  |||||||||||||||||| ||||||||      |||||||||||||| |||||||||     
T  18939967 caatcactaatataagtaaaaattcattttttaaatacatttaattaatgatgtatgtgatatataataaaaaccaagaccacatacatcattaattgaa 18940066  T
Q  127 tgta 130  Q
    ||||    
T  18940067 tgta 18940070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 22153190 - 22153123
Alignment:
Q  38 attaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaaga 105  Q
    ||||||||||  |||||| ||||||||||||||||  ||||||| |||||| ||| ||||||||||||    
T  22153190 attaatataaataaaaatttactttttagatacatttaattaataatgtatatgatatataataaaga 22153123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 29565242 - 29565187
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||||||  |||||||| |||||| ||||||||||| ||||||    
T  29565242 tcattaatataagcaaaaattcactttttacatacattcaattaatgatatatgtg 29565187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 51239254 - 51239305
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||    
T  51239254 taatataagcaaaaatctactctttagatacattcaactaatgatatatgtg 51239305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 51617460 - 51617409
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||||||||| || ||||||||||||||| ||||||||| ||||||||    
T  51617460 taatataagcaaaattccactttttagatacattcaattaatgttgtatgtg 51617409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 52168416 - 52168361
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||| ||||||||||||| |||||||||||||||  | |||||||||||||||    
T  52168416 tcattaacataagcaaaaatccactttttagatacattaatttaatgatgtatgtg 52168361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 18940108 - 18940047
Alignment:
Q  30 ctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||| |||| |||||||||||||||| ||  ||||| |||||| ||||||||||||||||||    
T  18940108 ctccgatcactaatataagcaaaaatttatattttatatacattcaattaatgatgtatgtg 18940047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 21404040 - 21403974
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||| |||||  ||| ||||||||||||||||| |  |||||||||||| ||||||||||||||||||    
T  21404040 gtacaccctccggtcactaatataagcaaaaatcca--ttttagatacattcaattaatgatgtatgtg 21403974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 36362597 - 36362666
Alignment:
Q  22 agtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||| |||||  ||| ||||||||||||||||| ||| |||| ||||||  |||||||||||||||||    
T  36362597 agtacaccctccggtcactaatataagcaaaaatcaactctttaaatacatttaattaatgatgtatgtg 36362666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 37897691 - 37897768
Alignment:
Q  38 attaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacat 115  Q
    |||| ||||||||||||||||  |||||||| ||| ||||||||||||||| |||  | || || |||||||||||||    
T  37897691 attattataagcaaaaatctaaattttagattcattcaattaatgatgtatatgatctttattatagaccacatacat 37897768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 16127860 - 16127792
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||||||   |||||||  |||||||||||| |||||||||    
T  16127860 tactttttaggttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattga 16127792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 25881265 - 25881197
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    ||||||||||||||| |||| |||||| | ||| || |||||||||||||||   ||||||||||||||    
T  25881265 taatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataataaagacca 25881197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 26367621 - 26367553
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||| |||||| |||| |||||||||||||||| |  |||||||| ||| |||| |||||||||||||    
T  26367621 gtacaccctccagtcataaatataagcaaaaatcaatgttttagattcattcaataaatgatgtatgtg 26367553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 54680517 - 54680585
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| ||||| |||||||||||||||||||   ||||||  ||| |||||||| |||||||||    
T  54680517 tactttttaggtacattcaattaatgatgtatgtgattcataatatggactacatacatcattaattga 54680585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 54726163 - 54726099
Alignment:
Q  61 ttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||| |||  |||||||||| |||||||  ||||||| |||||||||| ||||||||||||    
T  54726163 ttttagattcatttaattaatgatatatgtgatttataatatagaccacatatattattaattga 54726099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 8439252 - 8439335
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagac 106  Q
    ||||| |||||  ||| ||||||||||||||| |||| |||||| | ||| || |||||||||||||||   ||||||||||||    
T  8439252 gtacatcctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataataaagac 8439335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 29512256 - 29512209
Alignment:
Q  44 ataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||||||| || |||||||||||||  |||||||||||||||||    
T  29512256 ataagcaaaaatttattttttagatacatttaattaatgatgtatgtg 29512209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 29720205 - 29720154
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||  |||||||| ||||||  |||||||||||||||||    
T  29720205 taatataagcaaaaattcactttttaaatacatttaattaatgatgtatgtg 29720154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 41254076 - 41253985
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacat 115  Q
    |||| ||||| ||||||| |||||||||||||| || ||||||||||||  | | |||||||||||| | || || || | |||||||||||    
T  41254076 tacaccctccgatcattattataagcaaaaatcaacattttagatacatttattaaatgatgtatgtaatatttattataaaccacatacat 41253985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 52931652 - 52931703
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||  | | ||||||||||| ||||||||||||||||||    
T  52931652 taatataagcaaaaattcattctttagatacattcaattaatgatgtatgtg 52931703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 3972489 - 3972531
Alignment:
Q  50 aaaaatctactttttagatacatccaattaatgatgtatgtga 92  Q
    |||||||||| |||||||| ||| |||||||||||||||||||    
T  3972489 aaaaatctacattttagattcattcaattaatgatgtatgtga 3972531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 3994605 - 3994563
Alignment:
Q  50 aaaaatctactttttagatacatccaattaatgatgtatgtga 92  Q
    |||||||||| |||||||| ||| |||||||||||||||||||    
T  3994605 aaaaatctacattttagattcattcaattaatgatgtatgtga 3994563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 3997389 - 3997347
Alignment:
Q  50 aaaaatctactttttagatacatccaattaatgatgtatgtga 92  Q
    |||||||||| |||||||| ||| |||||||||||||||||||    
T  3997389 aaaaatctacattttagattcattcaattaatgatgtatgtga 3997347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 18480988 - 18480922
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||||| |  |||||||||||||||||||||   |||||||  |||||||||||| |||||||    
T  18480988 tactttttaggtttatccaattaatgatgtatgtggtttataatatggaccacatacatcattaatt 18480922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 27102250 - 27102161
Alignment:
Q  28 acctccaatcattaatataagcaaaaatcta--ctttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacat 115  Q
    |||||||||||||| ||||||||||||| ||   ||||||||| ||| |||| ||| |||||||||   |||| || |||||||||||||    
T  27102250 acctccaatcattattataagcaaaaatgtattttttttagattcattcaataaataatgtatgtgttctatattatagaccacatacat 27102161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 48895643 - 48895594
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||| || ||||||||||| |||||| |||||||||||||||    
T  48895643 aatataagcaaaattc-actttttagattcatccatttaatgatgtatgtg 48895594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 51060753 - 51060707
Alignment:
Q  79 aatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||| |||| |||||||||||| || ||||||||||||||||    
T  51060753 aatgatgtacgtgatatataataaagatcatatacattattaattga 51060707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 3074785 - 3074854
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaaga 105  Q
    ||||||||||||||||||| |||| || ||| | ||| || ||||||||||||||||  || ||||||||    
T  3074785 tcattaatataagcaaaaaactacattctaggttcattcatttaatgatgtatgtgatctacaataaaga 3074854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 24075571 - 24075526
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    ||||||||||||||||| |||||||| ||| ||||| |||||||||    
T  24075571 tataagcaaaaatctacattttagattcattcaattcatgatgtat 24075526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 52215894 - 52215979
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtg 128  Q
    ||||||||||||| ||| |||||||| ||| ||||| ||||||||| |||  | || || ||||||||||||| ||| | ||||||    
T  52215894 tataagcaaaaatttacattttagattcatgcaattgatgatgtatatgatctttattatagaccacatacatcatttaatgagtg 52215979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 8504983 - 8504911
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    |||||||||||| |||||| |||| |||||| | |||  | |||||||||||||||   ||||||||||||||    
T  8504983 tcattaatataaacaaaaaactacattttaggttcatttatttaatgatgtatgtggtctataataaagacca 8504911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 17004989 - 17005056
Alignment:
Q  60 tttttagatacatccaattaatgatgtatgtga--catataataaagaccacatacattattaattga 125  Q
    ||||||| | ||| ||||||||||||||||||   |||||| || ||||||||||||| |||||||||    
T  17004989 tttttaggttcattcaattaatgatgtatgtggtccatatattatagaccacatacatcattaattga 17005056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 21217180 - 21217252
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacat 115  Q
    ||||||||||||||||| |||||||| ||| || | ||||||||||| |   ||||||| |||| ||||||||    
T  21217180 tataagcaaaaatctacattttagattcattcattaaatgatgtatgcggtttataatacagactacatacat 21217252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 21659166 - 21659234
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||  | ||| |||||||||||||||||||   |||||| |||||||||| || |||||||||    
T  21659166 tactttttaagttcattcaattaatgatgtatgtgattcataatatagaccacatatatcattaattga 21659234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 29241613 - 29241561
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    |||||| ||||||| |||||| ||||||||||| ||| |||| ||||||||||    
T  29241613 tcattattataagccaaaatcaactttttagattcattcaataaatgatgtat 29241561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 34935650 - 34935582
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||  || |||||||||||||||||||   | ||||  |||||||||||| |||||||||    
T  34935650 tactttttagatttattcaattaatgatgtatgtgattcaaaatatggaccacatacatcattaattga 34935582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 40326565 - 40326482
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||| |  ||||||||| | ||| ||||||||||||||||||   |||||||   ||||||||||| |||||||||    
T  40326565 aatataagcaaaattg-actttttaggttcattcaattaatgatgtatgtggtttataatatgaaccacatacatcattaattga 40326482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 46739335 - 46739403
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||| ||    |||||| ||| |||||||||||||||||||    
T  46739335 tactttttaggttcattcaattaatgatgtatatggttcataatatagatcacatacattattaattga 46739403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 52638141 - 52638077
Alignment:
Q  61 ttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||| ||| ||||||||||||||||||    |||||| | | |||||||||||||||||||    
T  52638141 ttttagattcattcaattaatgatgtatgtggtcgataatataaatcacatacattattaattga 52638077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 246928 - 246834
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||    
T  246928 tcattaatataagcaaaaatctactttttagatacattcaattaatgatgtatctgacatataataaaaaccacatacatcattaattgaatgta 246834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 246806 - 246857
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  246806 taatataagcaaaaatttactttttagatacattcaattaatgatgtatgtg 246857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 3e-34; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 40098771 - 40098861
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  40098771 taatataagcaaaaatctactttttagatacattcaattaatgatatatgtgacatataataaagaccacatacatcattaattgaatgta 40098861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 13211372 - 13211285
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||    
T  13211372 tcattaatataagtaaaaatctattttttagatacattcaattaatgatgtatgtgacatataataaagaccacatatatcattaatt 13211285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 14381384 - 14381277
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaat 122  Q
    ||||| |||||  ||| |||||||| |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  14381384 gtacatcctccggtcactaatataaacaaaaatccactttttagatacattcaattaatgatgtatgtgatatataataaagaccacatacatcattaat 14381285  T
Q  123 tgagtgta 130  Q
    ||| ||||    
T  14381284 tgaatgta 14381277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 26014706 - 26014608
Alignment:
Q  31 tccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||| ||| ||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  26014706 tccagtcactaatataagcaaaaatccactttttagatacatc-aattaataatgtatgtgacatataataaagaccacatacatcattaattgaatgta 26014608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 9056033 - 9056115
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9056033 aatataagcaaaaattcactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaatt 9056115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 7377684 - 7377593
Alignment:
Q  40 taatataagcaaaaatctacttttt-agatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||  | ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||    
T  7377684 taatataagcaaaaattcatttttttagatacattcaattaatgatgtatgtgacatataataaagcccacatacatcattaattgaatgta 7377593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 13228881 - 13228964
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||| |||||||| | |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  13228881 taatataaacaaaaatccattttttaaatacattcaattaatgatatatgtgacatataataaagaccacatacatcattaatt 13228964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 29451742 - 29451828
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||| |||||||||||    ||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  29451742 taatataagaaaaaatctact----agatatattcaattaatgatgtatgtgacatataattaagaccacatacattattaattgaatgta 29451828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 1739712 - 1739634
Alignment:
Q  22 agtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataat 100  Q
    |||||| |||||  ||| |||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||    
T  1739712 agtacaccctccggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgtaacatataat 1739634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 9808380 - 9808466
Alignment:
Q  35 atcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||| |||||||| ||||||| ||||||||| |||||| ||||||||| |||||||||  ||||||||||||||||||||| |||||||    
T  9808380 atcactaatataaacaaaaatttactttttatatacattcaattaatggtgtatgtga--tataataaagaccacatacataattaatt 9808466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 15285660 - 15285754
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||  |||||| || |||||| ||||||  |||||||||||||||||||||||||||||||| | ||||||  |||||||| ||||    
T  15285660 tcattaatataaataaaaatttattttttaaatacatttaattaatgatgtatgtgacatataataaagactatatacatccttaattgaatgta 15285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 15466029 - 15466123
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||  |||||| || |||||| ||||||  |||||||||||||||||||||||||||||||| | ||||||  |||||||| ||||    
T  15466029 tcattaatataaataaaaatttattttttaaatacatttaattaatgatgtatgtgacatataataaagactatatacatccttaattgaatgta 15466123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 37716193 - 37716120
Alignment:
Q  50 aaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||| || ||||||||||||| ||||||||||||||||||| ||||||||||||| ||||| || |||||||    
T  37716193 aaaaatttattttttagatacattcaattaatgatgtatgtgatatataataaagactacatatatcattaatt 37716120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 14381249 - 14381300
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  14381249 taatataagcaaaaatccactttttagatacattcaattaatgatgtatgtg 14381300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 40098889 - 40098838
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  40098889 taatataagcaaaaatccactttttagatacattcaattaatgatgtatgtg 40098838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 11692142 - 11692093
Alignment:
Q  74 caattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  11692142 caattaatgatgtatgtgacatataataaagatcacatacatcattaatt 11692093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 2296466 - 2296570
Alignment:
Q  21 aagtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattatta 120  Q
    ||||||| ||||| ||||||| ||||||||||| | ||| |||||||| ||| || | |||||||||| ||   ||||||||||||||  ||||||||||    
T  2296466 aagtacatcctccgatcattattataagcaaaattttacattttagattcattcattaaatgatgtatatggtctataataaagaccatgtacattatta 2296565  T
Q  121 attga 125  Q
    |||||    
T  2296566 attga 2296570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 26014580 - 26014631
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  26014580 taatataagcaaaaattcactttttagatacattcaattaatgatgtatgtg 26014631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 5888485 - 5888417
Alignment:
Q  20 caagtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    ||||||||||||||   || || |||||||||||||||||||| ||||| ||| |||||||||||||||    
T  5888485 caagtacaacctccgggcactattataagcaaaaatctactttgtagattcattcaattaatgatgtat 5888417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 7377568 - 7377616
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  7377568 tataagcaaaaattcactttttagatacattcaattaatgatgtatgtg 7377616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 9056167 - 9056099
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||| |||||  ||| ||||||||||||||||  |||||||||||||||  |||||||||||||||||    
T  9056167 gtacaccctccggtcactaatataagcaaaaattcactttttagatacatttaattaatgatgtatgtg 9056099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 10117096 - 10117024
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacat 115  Q
    ||||||||||||| ||| |||||||| ||| ||||||||||||||| ||| || || || |||||||||||||    
T  10117096 tataagcaaaaatttacattttagattcattcaattaatgatgtatatgatatttattatagaccacatacat 10117024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 42631807 - 42631875
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||| ||| ||||||||||||||||||   |||||||  |||||||||||| |||||||||    
T  42631807 tactttttagattcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattga 42631875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 33574916 - 33574865
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||| |||||||| || |||||||||||| ||||||||||||||||||    
T  33574916 taatataaacaaaaatccacattttagatacattcaattaatgatgtatgtg 33574865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 15715375 - 15715445
Alignment:
Q  51 aaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||| |||||||||||| ||| || ||||||||||||||||   |||||| |||||||||| ||||||||    
T  15715375 aaaatttactttttagattcattcatttaatgatgtatgtgattcataatatagaccacatatattattaa 15715445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 10934729 - 10934649
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||||||||| || |||||||| ||| || | |||||||||||||   || ||||||||| |||||||| |||||||    
T  10934729 tataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtctacaataaagactacatacatcattaatt 10934649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 31810463 - 31810395
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    ||||||||||||||| |||| |||||||| ||| || ||||||||||||| |   ||||||||||||||    
T  31810463 taatataagcaaaaaactacattttagattcattcatttaatgatgtatgcggtctataataaagacca 31810395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 2810152 - 2810089
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaa 103  Q
    |||||||| |||||||||||||| || ||||||  ||| |||||| ||| ||||||||||||||    
T  2810152 taatataaacaaaaatctactttgtacatacatttaataaatgatatatatgacatataataaa 2810089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 9808505 - 9808450
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||||||  | |||||||||||||  ||||||| |||||||||    
T  9808505 tcattaatataagcaaaaattcattttttagatacatttaattaattatgtatgtg 9808450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 13211246 - 13211301
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||| |||||| || |||||||||||||  |||||||||| ||||||    
T  13211246 tcattaatataagtaaaaatttattttttagatacatttaattaatgatatatgtg 13211301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 3225918 - 3225824
Alignment:
Q  31 tccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||| |||||||||||||| |  |||| | | ||| || | |||||||||||||   ||||||||||| || |||||| |||||||||    
T  3225918 tccaatcattattataagcaaaaatcaatatttttggttcattcattaaatgatgtatgtggtctataataaagatcatatacatcattaattga 3225824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 5888350 - 5888432
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||||  || |||||||| ||| || | ||||||||||||    |||||||||||||| |||||| |||||||||    
T  5888350 tataagcaaaaattaacgttttagattcattcattaaatgatgtatgttgtctataataaagaccatatacatcattaattga 5888432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 27503052 - 27502998
Alignment:
Q  18 aacaagtacaacctccaatcattaatataagcaaaaatctactttttagatacat 72  Q
    ||||| |||| |||||| |||||| |||||||||||||| || ||||||||||||    
T  27503052 aacaactacaccctccagtcattattataagcaaaaatcaacattttagatacat 27502998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 28882682 - 28882760
Alignment:
Q  47 agcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||| |||||||||||||| ||| |||| |||||||||||||  |||||  | |||||||||| || ||| |||||    
T  28882682 agcaaaagtctactttttagattcattcaataaatgatgtatgtggtatatataatagaccacatatatcatttattga 28882760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 31505167 - 31505101
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagac 106  Q
    ||||||||||||||| |||| |||||| | ||| || |||||||||||||||   ||||||||||||    
T  31505167 taatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataataaagac 31505101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 40716774 - 40716840
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||||||| ||| ||||||||||||||||||  | ||| || | ||||||||||| |||||||    
T  40716774 tactttttagattcattcaattaatgatgtatgtggtacatattataaaccacatacatcattaatt 40716840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 9015950 - 9015897
Alignment:
Q  35 atcattaatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    ||||||| |||||| |||||||||  |||||||| ||| |||||||||||||||    
T  9015950 atcattattataagtaaaaatctatattttagattcattcaattaatgatgtat 9015897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 27502902 - 27502991
Alignment:
Q  30 ctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattatt 119  Q
    |||| |||| || |||||||||||||  || ||||| || ||| || | ||||||||||||||  |||||||||||| ||||| ||||||    
T  27502902 ctccgatcactattataagcaaaaattaacattttaaattcattcattaaatgatgtatgtgatttataataaagactacatatattatt 27502991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 34326260 - 34326341
Alignment:
Q  44 ataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | | | |||||||| ||| |||||||||||||||||    |||||||||||| | |||||| |||||||||    
T  34326260 ataagcaaaactttgcattttagattcattcaattaatgatgtatgttgtttataataaagactatatacatcattaattga 34326341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 8568848 - 8568916
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||||||   |||||||   ||||||||||| |||||||||    
T  8568848 tactttttaggttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattga 8568916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 11295678 - 11295726
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||||||||| || |||||||||||| || | |||||||||||||    
T  11295678 tataagcaaaaatcaacattttagatacattcattaaatgatgtatgtg 11295726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 11692059 - 11692110
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtga 92  Q
    |||||||| |||||||| |||||||||| ||||  ||||||||||||||||||    
T  11692059 taatataaacaaaaatccactttttagacacatt-aattaatgatgtatgtga 11692110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 18603548 - 18603504
Alignment:
Q  79 aatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||||||||  |||||||||||| || ||||||||||||||    
T  18603548 aatgatgtatgtggtatataataaagatcatatacattattaatt 18603504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 27781996 - 27781928
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||   ||| ||||||||||||||||||   |||||||  |||||||||||| |||||||||    
T  27781996 tactttttagggtcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattga 27781928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 33574845 - 33574888
Alignment:
Q  86 tatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||||| |||||||||| ||||||||| ||||    
T  33574845 tatgtgacatataataaag-ccacatacatcattaattgaatgta 33574888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 8961352 - 8961258
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||||| |||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8961352 tcattaatataaacaaaaatctactgtttaaatacattcaattaatgatgtatgtgacatataataaagaccacatacattattaattgaatgta 8961258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 15712128 - 15712222
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  15712128 tcattaatataagcaaaaatccattttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgta 15712222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 19531313 - 19531402
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  19531313 aatataagcaaaaattcactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgta 19531402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 42013950 - 42013861
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  42013950 aatataagcaaaaattcactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgta 42013861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 37944731 - 37944641
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  37944731 taatataagcaaaaatttattttttagatacattcaattaatgatgtatgtgacatataataaagatcacatacatcattaattgaatgta 37944641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 43446870 - 43446951
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  43446870 taatataagcaaaaatttactttttagatacatttaattaatgatgtatgtgacatataataaagaccacatacatcattaa 43446951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 3851492 - 3851402
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||  | |||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  3851492 taatataagcaaaaattcattttttagatacatttaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgta 3851402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 11262457 - 11262367
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||  | ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  11262457 taatataagcaaaaattcattttgtagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgta 11262367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 13311303 - 13311213
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||| |||||||||  |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  13311303 taatataagtaaaaatctatcttttagatacattcaattaatgatgtatgtaacatataataaagaccacatacatcattaattgaatgta 13311213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 26300240 - 26300150
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||| |||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  26300240 taatataagtaaaattttactttttagatacattcaattaatgatgtatatgacatataataaagaccacatacatcattaattgaatgta 26300150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 23914970 - 23914880
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||  |||||| |||||||| || |||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  23914970 taatataagcaaaaattcacttttaagatacattcatttaaggatgtatgtgacatataataaagaccacatacatcattaattgaatgta 23914880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 38835529 - 38835626
Alignment:
Q  33 caatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||| ||||||||||||||||  | |||||||||||||  |||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||    
T  38835529 caatcactaatataagcaaaaattcattttttagatacatttaattaatgatgtatgtgacatataataaagaccgtatacatcattaattgaatgta 38835626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 35969139 - 35969230
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaa-ttaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||  ||||||||| ||||    
T  35969139 taatataagcaaaaatccactttttagatacattcaaattaatgatgtatgtggcatataataaagactacatacaccattaattgaatgta 35969230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 37870146 - 37870056
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||||  |||||||||| || |||||||||||| |||||||||||||||||||| | ||||| |||||||||| ||||    
T  37870146 taatataagcaaaaatctcatttttagatatattcaattaatgatgaatgtgacatataataaagactatatacaatattaattgaatgta 37870056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 13157461 - 13157377
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||||||  |||||||| | |||| ||||||||||||||||||| ||||||||||||||| |||||| |||||||||    
T  13157461 taatataagcaaaaattcactttttaaa-acattcaattaatgatgtatgtgatatataataaagaccatatacatcattaattga 13157377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 3851358 - 3851425
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||| ||||| |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  3851358 tacaccctccgatcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtg 3851425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 15712266 - 15712199
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||| ||||| |||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  15712266 tacaccctccgatcattaatataagcaaaaatcaactttttaaatacattcaattaatgatgtatgtg 15712199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 21945415 - 21945476
Alignment:
Q  64 tagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||| || ||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  21945415 tagataaattcaattaatgatgtatgtgacatataataaagaccagatacatcattaattga 21945476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 14064937 - 14064854
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||||| |||||||||||| ||| |||||||||||||||||||   ||||||  |||||||||||| |||||||||    
T  14064937 aatataagcaaaaat-tactttttagattcattcaattaatgatgtatgtgattcataatatggaccacatacatcattaattga 14064854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 19531446 - 19531379
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||| ||||| |||| ||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  19531446 tacatcctccgatcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtg 19531379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 23914852 - 23914903
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  23914852 taatataagcaaaaatccactttttagatacattcaattaatgatgtatgtg 23914903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 26300122 - 26300173
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  26300122 taatataagcaaaaatttactttttagatacattcaattaatgatgtatgtg 26300173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 35172475 - 35172526
Alignment:
Q  74 caattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  35172475 caattaatgatgtatgtgacctataatatagaccacatacattattaattga 35172526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 37944596 - 37944665
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtga 92  Q
    ||||| |||||  ||| ||||||||||||||||  ||||||||||||||| |||||||||||||||||||    
T  37944596 gtacatcctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtga 37944665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 13157340 - 13157392
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  13157340 tcattaatataagcaaaaatccactttttagatatattcaattaatgatgtat 13157392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 11262339 - 11262390
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  11262339 taatataagcaaaaattcactttttagatacattcaattaatgatgtatgtg 11262390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 42013833 - 42013884
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  42013833 taatataagcaaaaattcactttttagatacattcaattaatgatgtatgtg 42013884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 13311169 - 13311236
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||| |||||  ||| |||||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  13311169 gtacaccctccggtcactaatataagcaaaagtctactttt-agatacattcaattaatgatgtatgtg 13311236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 15966068 - 15966000
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||||||   ||||||| ||||||||||||| |||||||||    
T  15966068 tactttttaggttcattcaattaatgatgtatgtggtttataatatagaccacatacatcattaattga 15966000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 21152616 - 21152684
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| |||||||||||||||||||  |||||||  |||||||||||| |||||||||    
T  21152616 tactttttaggttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaattga 21152684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 21159751 - 21159819
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| |||||||||||||||||||  |||||||  |||||||||||| |||||||||    
T  21159751 tactttttaggttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaattga 21159819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 21163558 - 21163626
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| |||||||||||||||||||  |||||||  |||||||||||| |||||||||    
T  21163558 tactttttaggttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaattga 21163626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 42247664 - 42247596
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||| |||||||| ||||||||||||| | ||||||| ||||||| ||||| ||| |||||    
T  42247664 tactttttagattcatccaataaatgatgtatgtggcctataatatagaccacgtacatcatttattga 42247596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 8961214 - 8961281
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||| |||||| ||| ||||||||||||||||  ||| ||||||||||| |||||||| |||||||||    
T  8961214 tacaccctccagtcactaatataagcaaaaattcactctttagatacattcaattaataatgtatgtg 8961281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 11172114 - 11172048
Alignment:
Q  36 tcattaatataagcaaaaat-ctacttttt-agatacatccaattaatgatgtatgtgacatataat 100  Q
    |||||||||||| ||||||  ||||||||| |||||||| |||||||||||||||||||||| ||||    
T  11172114 tcattaatataaacaaaaaaactacttttttagatacattcaattaatgatgtatgtgacatttaat 11172048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 25773254 - 25773339
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||||| |  || |||||||| ||| || | |||||||||| |||  |||||||||||||| |||||| |||||||||    
T  25773254 taatataagcaaaagtgaacattttagattcattcattaaatgatgtatttgatctataataaagaccatatacatcattaattga 25773339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 3100405 - 3100501
Alignment:
Q  29 cctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||| ||||| || |||||||||||||  || |||||||| ||| |||| ||||||||||||    ||||||||||| || |||||| |||||||||    
T  3100405 cctctaatcactattataagcaaaaattaacattttagattcattcaataaatgatgtatgtagtctataataaagatcatatacatcattaattga 3100501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 7336967 - 7336899
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||||||   |||||||  |||||||||||| |||||||||    
T  7336967 tactttttaggttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattga 7336899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 11795747 - 11795795
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    ||||||||||||||||| || |||||||| ||| |||||||||||||||    
T  11795747 taatataagcaaaaatcaacattttagattcattcaattaatgatgtat 11795795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 71273 - 71344
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacataca 114  Q
    ||||||||||||||||  |||||||| ||| ||||||||||||||| |||  | || || ||||||||||||    
T  71273 tataagcaaaaatctatattttagattcattcaattaatgatgtatatgatctttattatagaccacataca 71344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 13356270 - 13356215
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||| |||||||||||||||||||||||  | ||| |||| |||||||||||||    
T  13356270 tcattattataagcaaaaatctactttttaagttcattcaataaatgatgtatgtg 13356215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 29807089 - 29807172
Alignment:
Q  39 ttaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||||  | |||||||||||| ||| ||||||||||||||||||   ||||||   |||||||||||| |||||||||    
T  29807089 ttaatataagcaaattt-tactttttagattcattcaattaatgatgtatgtggtctataat--ggaccacatacataattaattga 29807172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 35969263 - 35969208
Alignment:
Q  35 atcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgt 90  Q
    |||| ||||||||| ||||||  ||||||||||||||| ||||||||| |||||||    
T  35969263 atcactaatataagtaaaaattcactttttagatacattcaattaatggtgtatgt 35969208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 37637314 - 37637365
Alignment:
Q  74 caattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||||||||||  |||||| | || ||||||||||||||||||    
T  37637314 caattaatgatgtatgtgactcataatataaactacatacattattaattga 37637365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 14416500 - 14416450
Alignment:
Q  75 aattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||||||||  |||||||  |||||||||||| |||||||||    
T  14416500 aattaatgatgtatgtgatttataatatggaccacatacatcattaattga 14416450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 26168300 - 26168226
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgtac 131  Q
    |||||||||| | ||| ||||||||||||||||||   |||||||  |||||||||||| |||| |||| |||||    
T  26168300 tactttttaggttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattagttgaatgtac 26168226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 1100062 - 1100143
Alignment:
Q  34 aatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacat 115  Q
    |||||||  ||||||||||| | ||| |||||||| ||| || | |||||||||||||   |||||||||||| ||||||||    
T  1100062 aatcattgttataagcaaaagtttacattttagattcattcattaaatgatgtatgtggtctataataaagactacatacat 1100143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 14571117 - 14571052
Alignment:
Q  60 tttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||| ||| ||||||||||||||||||    ||||||  |||||||||||| |||||||||    
T  14571117 tttttagattcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaattga 14571052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 5226146 - 5226067
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||||||||||| || ||||||||||| ||| || |||||||||||||||    ||||||  |||||||||||| |||||    
T  5226146 aatataagcaaaattc-actttttagattcattcatttaatgatgtatgtggttcataatatggaccacatacatcattaa 5226067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 5259533 - 5259469
Alignment:
Q  21 aagtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatg 85  Q
    ||||||| |||||  ||| ||||||||||||||| |||| |||||||| ||| || |||||||||    
T  5259533 aagtacaccctccggtcactaatataagcaaaaaactacattttagattcattcatttaatgatg 5259469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 6763826 - 6763778
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    ||||||||||||||||| | ||| ||||| ||| |||||||||||||||    
T  6763826 taatataagcaaaaatccattttctagattcattcaattaatgatgtat 6763778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 12646637 - 12646585
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    |||| ||||||||||||||| |||||||||||| |||  ||| ||||||||||    
T  12646637 tcataaatataagcaaaaatttactttttagattcatttaataaatgatgtat 12646585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 15965984 - 15966052
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||||||   |||| || | ||||||||||| |||||||||    
T  15965984 tactttttaggttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattga 15966052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 18003870 - 18003949
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||||||||||| || ||||||||| | ||| || |||||||||||||||    |||||| ||||||||||||| |||||    
T  18003870 aatataagcaaaattc-actttttaggttcattcatttaatgatgtatgtggttcataatatagaccacatacatcattaa 18003949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 18942014 - 18942082
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||| ||    |||||| ||||||||||||| |||||||||    
T  18942014 tactttttaggttcattcaattaatgatgtatatggttcataatatagaccacatacatcattaattga 18942082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 20518179 - 20518250
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    ||||||||||||| ||||| |||| ||||||||  || || |||||||||||||||   ||||||||||||||    
T  20518179 tcattaatataagaaaaaa-ctacattttagatttattcatttaatgatgtatgtggtctataataaagacca 20518250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 25408555 - 25408639
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||||||  |  |||||||| ||| |||| ||||||||||||    || |||||||||||||||||| ||| |||||    
T  25408555 aatataagcaaaaattcatattttagattcattcaataaatgatgtatgttgtctacaataaagaccacatacatcatttattga 25408639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 26141884 - 26141816
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    ||||||||||||||| |||  || ||||| ||| || |||||||||||||||   ||||||||||||||    
T  26141884 taatataagcaaaaaactatattctagattcattcatttaatgatgtatgtggtctataataaagacca 26141816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 37684998 - 37685066
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||  | ||| ||||||||||||||||||    |||||| |||| ||||||||||||||||||    
T  37684998 tactttttaagttcattcaattaatgatgtatgtggttcataatatagactacatacattattaattga 37685066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 43585622 - 43585539
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||| | |||||||||| | ||| ||||||||||||||||||    ||||||   ||||||||||| |||||||||    
T  43585622 aatataagcaaaatt-tactttttaggttcattcaattaatgatgtatgtggttcataatatgaaccacatacatcattaattga 43585539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 1e-33; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 21998167 - 21998078
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  21998167 aatataagcaaaaatctactttttagatacattcaattaatgatgtatgtgacatataataaatatcacatacattattaattgaatgta 21998078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 17773630 - 17773540
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||| ||||| ||||    
T  17773630 taatataagcaaaaatctactttttagatacattcaattaatgatgtatgtgatatataataaagaccacatacatcatttattgaatgta 17773540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 21506474 - 21506564
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  21506474 taatataagcaaaaatccactttttagatacattcaattaatgatgtatgtgacatataataaagatcacatacatcattaattgaatgta 21506564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 30397875 - 30397764
Alignment:
Q  18 aacaagtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacatta 117  Q
    |||| ||||| |||||  ||| |||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |    
T  30397875 aacatgtacaccctccggtcactaatataagcaaaaatcccttttttagatacattcaattaatgatgtatgtgacatataataaag-ccacatacatca 30397777  T
Q  118 ttaattgagtgta 130  Q
    |||||||| ||||    
T  30397776 ttaattgaatgta 30397764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 28577731 - 28577658
Alignment:
Q  39 ttaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacata 112  Q
    ||||||||||||||||| |||||||||||||||| |||||||| |||||||||| |||||||||||||||||||    
T  28577731 ttaatataagcaaaaatatactttttagatacattcaattaataatgtatgtgatatataataaagaccacata 28577658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 30460624 - 30460709
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||||||| ||||| |||||| || |||| |||||||||||||| |||||||||||||||||||||| |||||||||    
T  30460624 taatataagcaaaaatccactttgtagatatattcaatcaatgatgtatgtgatatataataaagaccacatacatcattaattga 30460709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 17268142 - 17268059
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    ||||||||| |||| |  ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  17268142 taatataagtaaaagttcactttctagatacattcaattaataatgtatgtgacatataataaagaccacatacatcattaatt 17268059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 21506596 - 21506540
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtga 92  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||||||||||||    
T  21506596 tcattaatataagcaaaaatttaatttttagatacattcaattaatgatgtatgtga 21506540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 8363610 - 8363685
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatata 98  Q
    ||||| |||||| |||||||||||| ||||||| || ||||||||||||| ||||||||||| ||||| |||||||    
T  8363610 gtacaccctccagtcattaatataaacaaaaatatattttttagatacattcaattaatgatatatgtcacatata 8363685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 30460753 - 30460691
Alignment:
Q  29 cctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||| ||| |||||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  30460753 cctccagtcactaatataagcaaaaatttactttttagatagattcaattaatgatgtatgtg 30460691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 31536455 - 31536381
Alignment:
Q  28 acctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataa 102  Q
    ||||||| ||| |||||||||||||||| ||||||||| |||||| |||||||| ||| |||||||| |||||||    
T  31536455 acctccagtcactaatataagcaaaaatttactttttaaatacattcaattaattatgcatgtgacacataataa 31536381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 21998034 - 21998140
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||| ||||| |||| ||||||||||||||||  | ||||||||||||| |||||||| |||||||||| || || || |   ||||||||| |||||||    
T  21998034 tacaccctccgatcactaatataagcaaaaatacattttttagatacattcaattaataatgtatgtgatatttattatatgtcacatacatcattaatt 21998133  T
Q  124 gagtgta 130  Q
    || ||||    
T  21998134 gaatgta 21998140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 14310650 - 14310582
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    ||||||||||||||||||   |||||||| ||| || |||||||||||||||  |||||||||||||||    
T  14310650 taatataagcaaaaatctgtattttagattcattcatttaatgatgtatgtggtatataataaagacca 14310582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 6047985 - 6048052
Alignment:
Q  58 actttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||| ||| ||||||||||||||||||||  ||||||   ||||||||||| |||||||||    
T  6047985 actttttagattcattcaattaatgatgtatgtgacccataatatgaaccacatacatcattaattga 6048052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 17773512 - 17773563
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||| |||||||| ||||||||||||||| |||| |||||||||||||    
T  17773512 taatataaacaaaaatccactttttagatacattcaataaatgatgtatgtg 17773563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 30397736 - 30397787
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||| |||||||| || |||||||||||| ||||||||||||||||||    
T  30397736 taatataaacaaaaatccacattttagatacattcaattaatgatgtatgtg 30397787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 31536322 - 31536373
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||| |||||||||||||||  | |||||||||||||||    
T  31536322 taatataagcaaaaatcaactttttagatacatttatttaatgatgtatgtg 31536373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 26527316 - 26527240
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattatt 119  Q
    |||||||||||||  || |||||||| ||| || | |||||||||||||   |||||||||||| ||||||||||||    
T  26527316 tataagcaaaaattaacattttagattcattcattaaatgatgtatgtggtttataataaagactacatacattatt 26527240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 29419932 - 29419860
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacata 96  Q
    |||| ||||||||||||| |||||| ||||||| || |||||||| ||| || | ||||||||||||| ||||    
T  29419932 tacatcctccaatcattattataagtaaaaatcaacattttagattcattcattaaatgatgtatgtggcata 29419860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 31398237 - 31398305
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    ||||||||||||||| |||| |||||| | ||| || |||||||||||||||   ||||||||||||||    
T  31398237 taatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataataaagacca 31398305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 4844300 - 4844351
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||||||||||   | ||||||||||||| ||||||||||||||||||    
T  4844300 taatataagcaaaaaatcattttttagatacattcaattaatgatgtatgtg 4844351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 17268024 - 17268075
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||| ||||||||| |||||| ||||||  |||||||||||||||||    
T  17268024 taatataagtaaaaatctattttttaaatacatttaattaatgatgtatgtg 17268075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 21478582 - 21478649
Alignment:
Q  58 actttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||| ||| ||||||||||||||||||    ||| || ||||||||||||| |||||||||    
T  21478582 actttttagattcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattga 21478649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 3012506 - 3012404
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaat 122  Q
    ||||| ||| || |||| |||||||||||||||  |  |||||||| ||| |||| ||||||||||||    || |||||||||||||||||| ||| ||    
T  3012506 gtacacccttcagtcataaatataagcaaaaattcatgttttagattcattcaataaatgatgtatgttgtttacaataaagaccacatacatcatttat 3012407  T
Q  123 tga 125  Q
    |||    
T  3012406 tga 3012404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 4844401 - 4844359
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatg 85  Q
    |||||||||||||  ||||||||||||||| ||||||||||||    
T  4844401 tataagcaaaaattcactttttagatacattcaattaatgatg 4844359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 5302011 - 5301961
Alignment:
Q  75 aattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| |||||||  ||||||| |||||||||| ||||||||||||    
T  5302011 aattaatgatatatgtgatttataatatagaccacatatattattaattga 5301961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 6560668 - 6560734
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagac 106  Q
    ||||||||||||||| |||| |||||| | ||| || |||||||||||||||   ||||||||||||    
T  6560668 taatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataataaagac 6560734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 7418903 - 7418969
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||||| | ||| ||||||||||||||||||    |||||| ||||||||||||| |||||||    
T  7418903 tactttttaggttcattcaattaatgatgtatgtggttcataatatagaccacatacatcattaatt 7418969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 14173404 - 14173486
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||||||| ||||||||| ||| |||| ||||| ||||||    |||||||  |||||||||||| ||| |||||    
T  14173404 tataagcaaaaatctaatttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattga 14173486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 14177940 - 14178022
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||||||| ||||||||| ||| |||| ||||| ||||||    |||||||  |||||||||||| ||| |||||    
T  14177940 tataagcaaaaatctaatttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattga 14178022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 3212272 - 3212337
Alignment:
Q  60 tttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||| | ||| |||||||||||||||||||  |||| ||  |||||||||||| |||||||||    
T  3212272 tttttaggttcattcaattaatgatgtatgtgatttatattatggaccacatacatcattaattga 3212337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 3673883 - 3673822
Alignment:
Q  58 actttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattatt 119  Q
    ||||||||||| ||| |||| |||||||||| ||| ||||||||  || |||||||||||||    
T  3673883 actttttagattcattcaataaatgatgtatatgatatataatatggatcacatacattatt 3673822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 7158245 - 7158318
Alignment:
Q  18 aacaagtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||||| ||||  ||||  ||||||||||||||||||  ||||||||  || |||| |||||||||||||    
T  7158245 aacaagtacaccctctgatcacaaatataagcaaaaatctatgttttagatttattcaataaatgatgtatgtg 7158318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 13281548 - 13281593
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    ||||||||||||||||  |||||||| ||| |||||||||||||||    
T  13281548 tataagcaaaaatctagattttagattcattcaattaatgatgtat 13281593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 10258449 - 10258385
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    |||| ||||| ||||||| |||||| |||||   ||||||||||| ||| |||||||||||||||    
T  10258449 tacatcctccgatcattattataagtaaaaaataactttttagattcattcaattaatgatgtat 10258385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 10731501 - 10731569
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| || ||||||||||||||||  |||| || | ||||||||||| |||||||||    
T  10731501 tactttttaggttcattcatttaatgatgtatgtgatctatattataaaccacatacatcattaattga 10731569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 10731585 - 10731521
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    |||||||||| | ||| ||||||||||||||||||   ||||||| ||| ||||||||| |||||    
T  10731585 tactttttaggttcattcaattaatgatgtatgtggtttataatatagatcacatacatcattaa 10731521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 12349828 - 12349907
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||||||||||| || ||||||||| |  || || |||||||||||||||||  ||||||  |||||||||||| |||||    
T  12349828 aatataagcaaaattc-actttttaggttaattcatttaatgatgtatgtgactcataatatggaccacatacatcattaa 12349907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 15467691 - 15467627
Alignment:
Q  51 aaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacat 115  Q
    ||||| || |||| |||| ||| |||||||||||||||||||  ||||||| ||| |||||||||    
T  15467691 aaaatttatttttcagattcattcaattaatgatgtatgtgatttataatatagatcacatacat 15467627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 28554942 - 28555026
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    |||| |||||| ||| ||||||||| |||||| ||| |||||| | ||| || |||||||||||| ||   ||||||||||||||    
T  28554942 tacatcctccagtcactaatataagtaaaaatttacattttaggttcattcatttaatgatgtatatggtctataataaagacca 28555026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 13689547 - 13689632
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13689547 taatataagcaaaaatctattttttagatacattcaattaatgatgtatgtgacatataataaagacaacatacattattaattga 13689632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 5418526 - 5418609
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||| |||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5418526 taatatgagcaaaaatcaattttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaatt 5418609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 24941238 - 24941150
Alignment:
Q  42 atataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||| |||||||||  || |||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| ||||||||| ||||    
T  24941238 atatgagcaaaaattcaccttttagatacattcaattaatgatgtatttgatatataataaagaccacatacatcattaattgaatgta 24941150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 52817580 - 52817668
Alignment:
Q  42 atataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||  |||||| |||||||| || |||| |||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  52817580 atataagcaaaaattcacttttaagatacattcatttaaggatgtatgtgacatataataaagatcacatacatcattaattgaatgta 52817668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 10031650 - 10031565
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||| ||||||||  ||||||||||| ||  ||||||| ||||||||||||||||||||||| ||||||||| |||||||||    
T  10031650 taatataaacaaaaatccgctttttagatatatttaattaataatgtatgtgacatataataaagatcacatacatcattaattga 10031565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 5418661 - 5418593
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||| ||||| |||| |||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  5418661 gtacaccctccgatcactaatataagcaaaaatttactttttagatacattgaattaatgatgtatgtg 5418593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 52817696 - 52817644
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtga 92  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  52817696 taatataagcaaaaatccactttttagatacattcaattaatgatgtatgtga 52817644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 55087858 - 55087791
Alignment:
Q  22 agtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatg 89  Q
    |||||| |||||  ||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  55087858 agtacaccctccggtcactaatataagcaaaaatctaatttttagatacattcaattaatgatgtatg 55087791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 29223953 - 29224014
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataata 101  Q
    ||||||||||||||||| | |||||||||| || ||||||||||| ||||||||||||||||    
T  29223953 taatataagcaaaaatccattttttagatatattcaattaatgatatatgtgacatataata 29224014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 24941122 - 24941173
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  24941122 taatataagcaaaaattcactttttagatacattcaattaatgatgtatgtg 24941173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 38539480 - 38539579
Alignment:
Q  31 tccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||| || ||||||||||||| ||  ||||| ||  || |||| |||||||||| || |||||||||||||||||||||||  |||||||| ||||    
T  38539480 tccaatcactattataagcaaaaatttatattttaaatttattcaataaatgatgtatatggcatataataaagaccacatacatagttaattgaatgta 38539579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 10031508 - 10031564
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatat 97  Q
    ||||||||| |||||| |||||||||||||||| |||||||||||||| |||||||||    
T  10031508 taatataag-aaaaatttactttttagatacattcaattaatgatgtacgtgacatat 10031564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 20542834 - 20542899
Alignment:
Q  60 tttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||| ||| ||||||||||||||||||   ||||||| ||||||||||||| |||||||||    
T  20542834 tttttagattcattcaattaatgatgtatgtgggttataatatagaccacatacatcattaattga 20542899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 5281264 - 5281212
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtga 92  Q
    ||||||||| ||||||  ||||||||||||||| |||||||||||||||||||    
T  5281264 taatataagtaaaaattcactttttagatacattcaattaatgatgtatgtga 5281212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 51126217 - 51126149
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||||||   ||||||| ||||||||||||| |||||||||    
T  51126217 tactttttaggttcattcaattaatgatgtatgtggtctataatatagaccacatacatcattaattga 51126149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 19934783 - 19934716
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||| ||||| |||| || |||||||||||||||| ||||||||| ||| |||| |||||||||||||    
T  19934783 tacaccctccgatcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtg 19934716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 4406255 - 4406337
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||| ||||||| || ||||||||  || || | |||||||||||||   ||||||||||||||||||||| |||||||||    
T  4406255 tataagtaaaaatcaacattttagatttattcattaaatgatgtatgtggtctataataaagaccacatacatcattaattga 4406337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 29006849 - 29006931
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||||||| ||||||||| ||| |||| ||||||||||||||   || | | ||||||||||||| ||| |||||    
T  29006849 tataagcaaaaatctattttttagattcattcaataaatgatgtatgtgatccattaaatagaccacatacatcatttattga 29006931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 40881477 - 40881523
Alignment:
Q  79 aatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||    
T  40881477 aatgatgtatgtgacatataataaagatcatatacatcattaattga 40881523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 5281192 - 5281236
Alignment:
Q  86 tatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||    
T  5281192 tatgtgacatataataaagatcacatacatcattaattgaatgta 5281236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 14451086 - 14451018
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    |||||||||||||||| ||| |||||| | ||| |  ||||||||||||||||  ||||||||||||||    
T  14451086 taatataagcaaaaatttacattttaggttcattcgtttaatgatgtatgtgatctataataaagacca 14451018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 19878288 - 19878380
Alignment:
Q  31 tccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||| ||||||||||||||||  || |||||||| ||| || | || ||||||||||   ||||||||||| || |||||| |||||||    
T  19878288 tccaatcactaatataagcaaaaattaacattttagattcattcattaaacgatgtatgtggactataataaagatcatatacatcattaatt 19878380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 49482009 - 49481941
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    ||||||||||||||| |||| || ||| ||||| || |||||||||||||||   ||||||||||||||    
T  49482009 taatataagcaaaaaactacattctaggtacattcatttaatgatgtatgtggtctataataaagacca 49481941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 51126133 - 51126201
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||||||   |||| || ||||||||||||| |||||||||    
T  51126133 tactttttaggttcattcaattaatgatgtatgtggtctatattatagaccacatacatcattaattga 51126201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 54164939 - 54164891
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||||||||||| ||||||||| ||| |||| |||||||||||||    
T  54164939 tataagcaaaaatctattttttagattcattcaataaatgatgtatgtg 54164891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 54508164 - 54508252
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacata 112  Q
    |||| ||||| ||||| ||||||||||||||| ||  |||||||| ||| |||| ||||||||||||    || |||||||||||||||    
T  54508164 tacaccctccgatcataaatataagcaaaaatttatattttagattcattcaataaatgatgtatgttgtctacaataaagaccacata 54508252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 6243643 - 6243726
Alignment:
Q  47 agcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||| || |||||||||||||  ||||||| || ||||||| |||||| |||||  | |||||| ||||||||| ||||    
T  6243643 agcaaaaatttattttttagatacatttaattaataatatatgtgatatataaaaaagattatatacatcattaattgaatgta 6243726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 42013241 - 42013190
Alignment:
Q  74 caattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||||||||   ||||||| ||||||||||||| |||||||||    
T  42013241 caattaatgatgtatgtggtttataatatagaccacatacatcattaattga 42013190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 3504079 - 3504137
Alignment:
Q  31 tccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatg 89  Q
    |||||||| |||||||| |||||||  | ||||||||| ||| ||||||||||||||||    
T  3504079 tccaatcactaatataaacaaaaattcattttttagattcattcaattaatgatgtatg 3504137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 13689665 - 13689615
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgt 90  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||    
T  13689665 taatataagcaaaaattcactttttagattcattcaattaataatgtatgt 13689615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 13743970 - 13743904
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||||| | ||| ||||||||||||||||||   |||||||  |||||||||||| |||||||    
T  13743970 tactttttaggttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaatt 13743904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 44156129 - 44156083
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgt 86  Q
    ||||||||||||||||  |||||||||||||||  ||||||||||||    
T  44156129 taatataagcaaaaattcactttttagatacattgaattaatgatgt 44156083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 52281132 - 52281214
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||| | | ||||| || ||| |||| ||||||||||||   |||||||||||||||||| |||  ||||||||    
T  52281132 tataagcaaaaatatgcattttatattcattcaataaatgatgtatgtagtatataataaagaccacatgcatccttaattga 52281214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 3511715 - 3511768
Alignment:
Q  35 atcattaatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    |||| |||||||||||||| | ||| |||||||| ||| |||||||||||||||    
T  3511715 atcactaatataagcaaaactttacattttagattcattcaattaatgatgtat 3511768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 4044440 - 4044359
Alignment:
Q  27 aacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    |||||||  ||| ||||||||||||||| |||| |||||  | ||| || |||||||||||||||   ||||||||||||||    
T  4044440 aacctccggtcactaatataagcaaaaaactacattttatgttcattcatttaatgatgtatgtggtctataataaagacca 4044359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 6462726 - 6462775
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtga 92  Q
    ||||| |||||||||||||||||| | ||| |||| ||||||||||||||    
T  6462726 tataaacaaaaatctactttttaggttcattcaataaatgatgtatgtga 6462775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 14450952 - 14451013
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatg 85  Q
    |||| ||||| |||| || ||||||||||||||||| |||||||| ||| || |||||||||    
T  14450952 tacaccctccgatcactattataagcaaaaatctacattttagattcattcatttaatgatg 14451013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 15133840 - 15133912
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacataca 114  Q
    ||||||||||||| | |||||||||| | ||| |||||||||||||||||||   ||||||  |||||||||||    
T  15133840 aatataagcaaaatt-tactttttaggttcattcaattaatgatgtatgtgagtcataatatggaccacataca 15133912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 34827581 - 34827516
Alignment:
Q  60 tttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||| ||| ||||||||||||||||||   ||| |||  ||||||||| ||||||||||||    
T  34827581 tttttagattcattcaattaatgatgtatgtggtttatgatattgaccacatatattattaattga 34827516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 39533889 - 39533820
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaaga 105  Q
    |||||| |||||||||||||| || ||||||||  || || | ||||||||||||||  |||||||||||    
T  39533889 tcattattataagcaaaaatcaacattttagatttattcattaaatgatgtatgtgatctataataaaga 39533820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 6243754 - 6243706
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    ||||||||| |||||| || | ||||||||||| |||||||||||||||    
T  6243754 taatataagaaaaaatttattatttagatacattcaattaatgatgtat 6243706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 9968329 - 9968397
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||||||    ||||||  |||||||||||| |||||||||    
T  9968329 tactttttaggttcattcaattaatgatgtatgtggttaataatatggaccacatacatcattaattga 9968397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 19934652 - 19934700
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||| || ||||||||||| ||| |||| |||||||||||||    
T  19934652 tataagcaaaattccactttttagattcattcaataaatgatgtatgtg 19934700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 20294564 - 20294512
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    |||||||||||||||||||| ||| |||||| | ||| || ||||||||||||    
T  20294564 tcattaatataagcaaaaatttacattttaggttcattcatttaatgatgtat 20294512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 23329398 - 23329466
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||||||   |||||||  |||||||||||| | |||||||    
T  23329398 tactttttaggttcattcaattaatgatgtatgtggtttataatatggaccacatacatcaataattga 23329466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 23710947 - 23710879
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||||||   |||||||  |||||||||||| | |||||||    
T  23710947 tactttttaggttcattcaattaatgatgtatgtggtttataatatggaccacatacatcaataattga 23710879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 25700485 - 25700553
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||| ||| || | ||||||||||||||  || |||| ||||||||||||| ||| |||||    
T  25700485 tactttttagattcattcagtaaatgatgtatgtgatctacaatatagaccacatacatcatttattga 25700553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 25856038 - 25856106
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||| |||  ||| |||||||||||||    |||||| ||||||||||||| |||||||||    
T  25856038 tactttttagattcatttaatcaatgatgtatgtggttcataatatagaccacatacatcattaattga 25856106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 27080169 - 27080087
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||| | |||||||||| | ||| |||||||| |||||||||   ||||||| ||||||||||||  |||||||||    
T  27080169 aatataagcaaaatt-tactttttaggttcattcaattaat-atgtatgtggtttataatatagaccacatacaacattaattga 27080087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 31808335 - 31808414
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||||||||||| || ||||||||| | ||| || |||||||||||||||    |||||| ||||||||||||| |||||    
T  31808335 aatataagcaaaattc-actttttaggttcattcatttaatgatgtatgtggttcataatatagaccacatacatcattaa 31808414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 31860664 - 31860735
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatac 113  Q
    ||||||||||||| || ||||||||||| ||| || |||||||||||||||    |||||| |||||||||||    
T  31860664 aatataagcaaaattc-actttttagattcattcatttaatgatgtatgtggttcataatatagaccacatac 31860735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 40952571 - 40952635
Alignment:
Q  61 ttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||| ||| |||||||||||||||||    ||||||| | || ||||||||||||||||||    
T  40952571 ttttagattcattcaattaatgatgtatgtagtctataatataaactacatacattattaattga 40952635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 42013174 - 42013242
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||| || ||| ||||||||||||||||||   |||| || | ||||||||||| |||||||||    
T  42013174 tactttttaaattcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattga 42013242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 45861132 - 45861053
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||||||||||| || ||||||||||| ||| || |||||||||||||||    ||||||  |||||||||||| |||||    
T  45861132 aatataagcaaaattc-actttttagattcattcatttaatgatgtatgtggttcataatatggaccacatacatcattaa 45861053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 54164827 - 54164875
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||| || ||||||||||| ||| |||| |||||||||||||    
T  54164827 tataagcaaaattccactttttagattcattcaataaatgatgtatgtg 54164875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 2e-32; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 31008392 - 31008305
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  31008392 tcattaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtaacatataataaagaccacatacatcattaatt 31008305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 21 - 130
Target Start/End: Original strand, 3384215 - 3384324
Alignment:
Q  21 aagtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattatta 120  Q
    ||||||| |||||  ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || |    
T  3384215 aagtacaccctccggtcattaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtgacatataataaagatcacatacatcatca 3384314  T
Q  121 attgagtgta 130  Q
    ||||| ||||    
T  3384315 attgaatgta 3384324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 6065472 - 6065562
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||| ||||||||| ||||    
T  6065472 taatataagcaaaattctactttttagatacattcaattaatgatggatgtgacatataataaggaccacatacatcattaattgaatgta 6065562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 14418190 - 14418104
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaat 122  Q
    ||||||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  14418190 tcattaatataagcaaaaattcactttttagatacattcaactaatgatgtatgtgacatataataaagaccacatacatcattaat 14418104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 15439873 - 15439963
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||| |||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  15439873 taatataaacaaaaatctattttgtagatacattcaattaatgatatatgtgacatataataaagaccacatacattattaattgaatgta 15439963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 34658397 - 34658487
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||  |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34658397 taatataagcaaaaattcacttttcagatacatttaattaatgatgtatgtgacatataataaagaccacatacattattaattgaatgta 34658487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 8257955 - 8258044
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||||||||  ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  8257955 aatataagcaaaaattcactttttagatacattcaattaataatgtatgtgacatataataaagaccacatacatcattaattgaatgta 8258044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 4060317 - 4060215
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaat 122  Q
    ||||| |||||  ||| |||||||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||||||||||| |||||||||    
T  4060317 gtacaccctccggtcactaatataagcaaaaatctactttttagatacatttaactaatgatgtatttgagatataataaagaccacatatattattaat 4060218  T
Q  123 tga 125  Q
    |||    
T  4060217 tga 4060215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 27206888 - 27206798
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||| ||||    
T  27206888 taatataagcaaaaatcaactatttagatacattcaattaatgatgtatgcgacatataataaagactacatacatcattaattgaatgta 27206798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 37734784 - 37734874
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||  |||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  37734784 taatataagcaaaaattcacttttaagatacattcaattaatgatgtatgtgacatataataaagaccgcatacatcattaattgaatgta 37734874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 40262479 - 40262562
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||| |||||||| | |||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40262479 taatataaacaaaaatccagtttttagatatattcaattaatgatgtatgtgacatataataaagaccacatacatcattaatt 40262562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 639928 - 639838
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||  |||||| |||||||| || |||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  639928 taatataagcaaaaattcacttttaagatacattcatttaaggatgtatgtgacatataataaagaccacatacatcattaattgaatgta 639838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 2349767 - 2349857
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||| |||||||| | ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| ||||||||| ||||    
T  2349767 taatataaacaaaaatccattttttagatacattcaattaatgatgcatgtgacatataataaagactacatacatcattaattgaatgta 2349857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 35367604 - 35367522
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||||| | ||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||| |||||||||    
T  35367604 tataagcaaaaatccattttttagatacattcaattaatgatgtatgtgacatattataaagaccacatgcatcattaattga 35367522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 48022724 - 48022634
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||  |||||| |||||||| || |||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  48022724 taatataagcaaaaattcacttttaagatacattcatttaaggatgtatgtgacatataataaagaccacatacatcattaattgaatgta 48022634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 4602655 - 4602745
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||| ||||| || ||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| || ||||||||| ||||    
T  4602655 taatataaacaaaattccactttttagatacattcaattaatgatatatgtgacatataataaataccacatatatcattaattgaatgta 4602745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 33604002 - 33604092
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||| |||||||  |||||| |||||||| || |||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  33604002 taatataaacaaaaattcacttttaagatacattcatttaaggatgtatgtgacatataataaagaccacatacatcattaattgaatgta 33604092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 2352916 - 2352989
Alignment:
Q  50 aaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    ||||||| ||||||||||||||| |||||||||| |||| |||||||||||||||| ||||||||| |||||||    
T  2352916 aaaaatccactttttagatacattcaattaatgacgtatttgacatataataaagagcacatacatcattaatt 2352989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 639793 - 639861
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||| |||||  ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  639793 gtacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtg 639861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 5856402 - 5856458
Alignment:
Q  74 caattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||    
T  5856402 caattaatgatgtacgtgacatataataaagaccacatacataattaattgaatgta 5856458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 31008270 - 31008321
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  31008270 taatataagcaaaaatctactttttagatacatttaattaatgatgtatgtg 31008321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 33604120 - 33604069
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  33604120 taatataagcaaaaatccactttttagatacattcaattaatgatgtatgtg 33604069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 48022606 - 48022657
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  48022606 taatataagcaaaaatccactttttagatacattcaattaatgatgtatgtg 48022657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 37734902 - 37734853
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatg 89  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  37734902 taatataagcaaaaatccactttttagatacattcaattaatgatgtatg 37734853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 6065590 - 6065539
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  6065590 taatataagcaaaaatccactctttagatacattcaattaatgatgtatgtg 6065539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 8258072 - 8258021
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  8258072 taatataagcaaaaattcactttttagatacattcaattaatgatgtatgtg 8258021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 19175733 - 19175666
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||| |||||| ||| || |||||||||||||||||||||||||| ||| |||| |||||||||||||    
T  19175733 tacaccctccagtcactattataagcaaaaatctactttttagattcattcaataaatgatgtatgtg 19175666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 27206770 - 27206820
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgt 90  Q
    ||||||||||||||| | ||||||||||||||| |||||||||||||||||    
T  27206770 taatataagcaaaaaaccactttttagatacattcaattaatgatgtatgt 27206820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 2353029 - 2352973
Alignment:
Q  35 atcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||| |||||||||||||||| || |||||||||||||  |||||||||||||||||    
T  2353029 atcactaatataagcaaaaatttattttttagatacatttaattaatgatgtatgtg 2352973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 5856491 - 5856435
Alignment:
Q  35 atcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||| ||||||||||||||||| |||||||| |||||| |||||||| |||||||||    
T  5856491 atcactaatataagcaaaaatccactttttaaatacattcaattaattatgtatgtg 5856435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 34953888 - 34953992
Alignment:
Q  21 aagtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattatta 120  Q
    ||||||| |||||| ||| || |||||||||||||| |  ||||| || ||| || | |||||||||||||   |||||||||||||| |||||| ||||    
T  34953888 aagtacaccctccagtcactattataagcaaaaatcaatattttaaattcattcattaaatgatgtatgtggtctataataaagaccatatacatcatta 34953987  T
Q  121 attga 125  Q
    |||||    
T  34953988 attga 34953992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 50550259 - 50550163
Alignment:
Q  29 cctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||| |||| || |||||  ||||||| || |||||||| ||| || | ||||||||||||||  ||||||||||| || ||||||||||||||||    
T  50550259 cctccgatcactattataaagaaaaatcaacattttagattcattcattaaatgatgtatgtgatctataataaagatcatatacattattaattga 50550163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 17490499 - 17490550
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||| |||||||||||||||  |||||||||| ||||||    
T  17490499 taatataagcaaaaatccactttttagatacatttaattaatgatatatgtg 17490550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 23944048 - 23944099
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||  | ||||||||||||| ||||||||||||||||||    
T  23944048 taatataagcaaaaattcattttttagatacattcaattaatgatgtatgtg 23944099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 52923449 - 52923395
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatat 97  Q
    |||||||||||||||||||||||| | ||| |||| |||||||||||||| ||||    
T  52923449 tataagcaaaaatctactttttaggttcattcaataaatgatgtatgtgatatat 52923395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 8466071 - 8465974
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    |||| |||||| |||||| ||||| ||||| | | | |||||||| |||  | |||||||||||||||   ||||||||||||||||||||| |||||    
T  8466071 tacatcctccagtcattattataaacaaaactttgcattttagattcatttatttaatgatgtatgtggtctataataaagaccacatacatcattaa 8465974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 15439993 - 15439940
Alignment:
Q  38 attaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||||  |||||||| |||||| |||||||| |||||||||    
T  15439993 attaatataagcaaaaattgactttttaaatacattcaattaataatgtatgtg 15439940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 31909858 - 31909793
Alignment:
Q  60 tttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||| | ||| ||||||||||||||||||   ||||||| ||||||||||||| |||||||||    
T  31909858 tttttaggttcattcaattaatgatgtatgtggtttataatatagaccacatacatcattaattga 31909793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 6283664 - 6283596
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    ||||||||||||||| |||| |||||| | ||| || |||||||||||||||   ||||||||||||||    
T  6283664 taatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataataaagacca 6283596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 33765913 - 33765833
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||||||||| || |||||||| |||  | | |||||||||||||   |||||||||||||| |||||| |||||||    
T  33765913 tataagcaaaaatcaacattttagattcatttattaaatgatgtatgtggtctataataaagaccatatacatcattaatt 33765833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 37255253 - 37255170
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||| || |||||||||| | ||| ||||||||||||||||||    ||||||  |||||||||||| |||||||||    
T  37255253 aatataagcaaatat-tactttttaggttcattcaattaatgatgtatgtggttaataatatggaccacatacatcattaattga 37255170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 47011356 - 47011288
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| |||||||||||||||||||  |||||||  ||||||||| || |||||||||    
T  47011356 tactttttaggttcattcaattaatgatgtatgtgatttataatatggaccacatatatcattaattga 47011288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 49586222 - 49586150
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    ||||||||||||||||||| |||| || ||| | ||| || |||||||||||||||   ||||||||||||||    
T  49586222 tcattaatataagcaaaaaactacattctaggttcattcatttaatgatgtatgtggtttataataaagacca 49586150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 2349886 - 2349835
Alignment:
Q  40 taatataagcaaaaatctacttttt-agatacatccaattaatgatgtatgt 90  Q
    ||||||||| ||||||||| ||||| |||||||| |||||||||||||||||    
T  2349886 taatataagtaaaaatctatttttttagatacattcaattaatgatgtatgt 2349835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 4060182 - 4060233
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||| |||||||||||| || |||||||| || ||||||    
T  4060182 taatataagcaaaaatccactttttagatatattcaattaataatatatgtg 4060233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 4602789 - 4602722
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||  ||| ||||||||| ||||||  | ||||||||||||| ||||||||||| ||||||    
T  4602789 tacaacctccggtcactaatataagtaaaaattcattttttagatacattcaattaatgatatatgtg 4602722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 5431469 - 5431418
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||  ||||||||||| ||| |||| |||||||||||||    
T  5431469 taatataagcaaaaattaactttttagattcattcaataaatgatgtatgtg 5431418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 5595434 - 5595516
Alignment:
Q  43 tataagcaaaaatcta-ctttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||| |||| | |||||||| ||| || ||||| |||||||||| ||||||||||||||| ||| |||| |||||||    
T  5595434 tataagcaaaattctaacattttagattcattca-ttaataatgtatgtgatatataataaagaccatatatattactaattga 5595516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 119
Target Start/End: Complemental strand, 6735843 - 6735748
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattatt 119  Q
    |||||||| ||||||||| | |||||||||||| |||||||||||  ||  ||| |||||| ||||   | |||| || |||||||||||||||||    
T  6735843 tacaaccttcaatcattattttaagcaaaaatcaactttttagatttattgaataaatgatatatgcatcttatattatagaccacatacattatt 6735748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 33738275 - 33738208
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattg 124  Q
    |||||||||| | ||| ||||||||||||||||||   |||||||  |||||||||||| ||||||||    
T  33738275 tactttttaggttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattg 33738208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 34658519 - 34658464
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||| |||||||||||| |||| |||||| |||||| |||||||| |||||||||    
T  34658519 tcattgatataagcaaaattctattttttaaatacattcaattaataatgtatgtg 34658464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 1035893 - 1035983
Alignment:
Q  35 atcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||| ||||||||||||||||| | ||| ||||| ||| |||| |||||||||||| || |||||| || ||  |||| || |||||||||    
T  1035893 atcactaatataagcaaaaatccagtttctagattcattcaataaatgatgtatgttacctataattaaaactgcataaatcattaattga 1035983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 131
Target Start/End: Original strand, 5852716 - 5852790
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgtac 131  Q
    |||||||||| | ||| ||||||||||||||||||   |||||||  |||||||||||| |||| |||| |||||    
T  5852716 tactttttaggttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattagttgaatgtac 5852790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 15351843 - 15351793
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||||  |||||||| ||| |||| |||||||||||||    
T  15351843 aatataagcaaaaatctatgttttagattcattcaataaatgatgtatgtg 15351793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 36040157 - 36040223
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagac 106  Q
    ||||||||||||||| |||| |||||| | ||| || |||||||||||||||   ||||||||||||    
T  36040157 taatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataataaagac 36040223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 46518057 - 46517983
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgtac 131  Q
    |||||||||| | ||| ||||||||||||||||||   |||||||  |||||||||||| |||| |||| |||||    
T  46518057 tactttttaggttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattagttgaatgtac 46517983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 3384369 - 3384300
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtga 92  Q
    ||||| |||||  ||| ||||||||  ||||||  ||||||||||||||| ||||| |||||||||||||    
T  3384369 gtacatcctccggtcactaatataaataaaaattcactttttagatacattcaattgatgatgtatgtga 3384300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 3549793 - 3549834
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgat 84  Q
    ||||||||||||||||| |||||||| ||| |||||||||||    
T  3549793 tataagcaaaaatctacattttagattcattcaattaatgat 3549834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 14967363 - 14967302
Alignment:
Q  31 tccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtga 92  Q
    |||||||| || |||||||||||||| || |||||||| ||| || | ||||||||||||||    
T  14967363 tccaatcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtga 14967302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 435219 - 435298
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||||||||||| |  ||||||||||| ||| || |||||||||||||||   |||||||  |||||||||||| |||||    
T  435219 aatataagcaaaattg-actttttagattcattcatttaatgatgtatgtggtttataatatggaccacatacatcattaa 435298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 1036035 - 1035967
Alignment:
Q  21 aagtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatg 89  Q
    ||||||| |||||  ||| ||||||||||||||||  ||||| ||||| ||| ||||||||||| ||||    
T  1036035 aagtacaccctccggtcactaatataagcaaaaattcactttctagattcattcaattaatgatttatg 1035967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 4682950 - 4683033
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||| |  |||||||||||  || ||||||||||||||||||    ||| || ||||||||||||| |||||||||    
T  4682950 aatataagcaaaatta-actttttagatttattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattga 4683033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 15278593 - 15278661
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| || ||||||||||||||||  |||| || | ||||||||||| |||||||||    
T  15278593 tactttttaggttcattcatttaatgatgtatgtgatctatattataaaccacatacatcattaattga 15278661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 15351727 - 15351811
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||||| ||  ||||| || ||| |||| ||||||||||||    || |||||||||||||||||| ||| |||||    
T  15351727 aatataagcaaaaatttatattttaaattcattcaataaatgatgtatgttgtctacaataaagaccacatacatcatttattga 15351811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 21321376 - 21321412
Alignment:
Q  87 atgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||||||||||||||||| |||||| |||||||    
T  21321376 atgtgacatataataaagaccatatacatcattaatt 21321412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 25378285 - 25378353
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||||||    ||||||  |||||||||||| |||||||||    
T  25378285 tactttttaggttcattcaattaatgatgtatgtggttcataatattgaccacatacatcattaattga 25378353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 27549157 - 27549089
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||||||    ||||||  |||||||||||| |||||||||    
T  27549157 tactttttaggttcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaattga 27549089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 31909777 - 31909845
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||||||   |||| || | ||||||||||| |||||||||    
T  31909777 tactttttaggttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattga 31909845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 35050044 - 35049976
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||| ||| |||  ||||||| ||| ||||||||| |||||||||    
T  35050044 tactttttagtttcattcaattaatgatatatatgatttataatatagatcacatacatcattaattga 35049976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 36535718 - 36535750
Alignment:
Q  58 actttttagatacatccaattaatgatgtatgt 90  Q
    ||||||||||||||| |||||||||||||||||    
T  36535718 actttttagatacattcaattaatgatgtatgt 36535750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 37255137 - 37255188
Alignment:
Q  39 ttaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||  | |||||||||||| ||| ||||||||||||||||||    
T  37255137 ttaatataagcaaattt-tactttttagattcattcaattaatgatgtatgtg 37255188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 38468794 - 38468730
Alignment:
Q  61 ttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||  ||| ||||||||||||    || |||||||||||||||||||||| |||||    
T  38468794 ttttagatacatttaataaatgatgtatgttgtctacaataaagaccacatacattatttattga 38468730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 38847429 - 38847350
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||||||||||| |  ||||||||| | ||| || |||||||||||||||   ||||||| ||||||||||||| |||||    
T  38847429 aatataagcaaaattg-actttttaggttcattcatttaatgatgtatgtggtttataatatagaccacatacatcattaa 38847350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 42761246 - 42761325
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||||||||||| || ||||||||| | ||| || |||||||||||||||    |||||| ||||||||||||| |||||    
T  42761246 aatataagcaaaattc-actttttaggttcattcatttaatgatgtatgtggttcataatatagaccacatacatcattaa 42761325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 42761460 - 42761512
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    |||||| ||||||||||| | ||| |||||||| ||| |||||||||||||||    
T  42761460 tcattattataagcaaaactttacattttagattcattcaattaatgatgtat 42761512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 45115165 - 45115249
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    |||| ||||| |||| |||||||||||||||||||  |||||| |  || || |||||||| ||||||   ||||||||||||||    
T  45115165 tacaccctccgatcactaatataagcaaaaatctatattttaggtttattcatttaatgatatatgtggtctataataaagacca 45115249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 45239019 - 45239087
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||| |||  ||| |||||||||||||    |||||| ||||||||||||| |||||||||    
T  45239019 tactttttagattcatttaatcaatgatgtatgtggttcataatatagaccacatacatcattaattga 45239087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 45925371 - 45925292
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||||||||||| | |||||||||| | ||| || |||||||||||||||    |||||| ||||||||||||| |||||    
T  45925371 aatataagcaaaatt-tactttttaggttcattcatttaatgatgtatgtggttcataatatagaccacatacatcattaa 45925292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 52253566 - 52253634
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||| || ||| |||||||||||||||||||  |||||||  ||| |||| ||| |||||||||    
T  52253566 tactttttatattcattcaattaatgatgtatgtgatttataatatggactacatgcatcattaattga 52253634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 7e-32; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 43426761 - 43426667
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  43426761 tcattaatataagcaaaaatttattttttagatacattcaattaatgatatatgtgacatataataaagaccacatacatcattaattgaatgta 43426667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 34248544 - 34248454
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||| ||||    
T  34248544 taatataagcaaaaatccactttttagatacattcaattaatgatgtatctgacatataataaagacaacatacatcattaattgaatgta 34248454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 3887962 - 3887872
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || ||||||||| ||||    
T  3887962 taatataagcaaaaatcatctttttagatacattcaattaatgatgtatgtgacatataataaagactacataaatcattaattgaatgta 3887872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 38594473 - 38594383
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| || |||| |||| ||||    
T  38594473 taatataagcaaaaatctattttttagatacattcaattaatgatgtatgtgacatataataaggaccacatatatcattagttgaatgta 38594383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 38598069 - 38597979
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| || |||| |||| ||||    
T  38598069 taatataagcaaaaatctattttttagatacattcaattaatgatgtatgtgacatataataaggaccacatatatcattagttgaatgta 38597979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 38618231 - 38618146
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||||||||||| ||||||||| || |||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||    
T  38618231 tcattaatataagtaaaaatctatttgttagatacattcaattaatgatgtatgtgatatataataaagaccacatacatcattaa 38618146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 1981113 - 1981024
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| || ||||||||| ||||    
T  1981113 taatataagcaaaaatctcatttttagatacattcaattaatgatgtatgtgacatataataaag-ccacataaatcattaattgaatgta 1981024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 5574121 - 5574211
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||  |||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  5574121 taatataagcaaaaattcacttttaaaatacattcaattaatgatatatgtgacatataataaagaccacatacatcattaattgaatgta 5574211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 30902284 - 30902374
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||  | |||||| |||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||    
T  30902284 taatataagcaaaaattcattttttaaatacattcaattaatgatgtatgtgacatataataaagaccacatatatcattaattgaatgta 30902374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 3714335 - 3714252
Alignment:
Q  47 agcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||  ||||||||| || |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||| ||||    
T  3714335 agcaaaaattcactttttaggtatatccaattaatgatgtatgtgatatataataaagactacatacataattaattgaatgta 3714252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 6567044 - 6566961
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    ||||||||||||||||| ||| |||||||| || |||||||||||||||| ||||||||||||| || | ||||||||||||||    
T  6567044 taatataagcaaaaatccactatttagatatattcaattaatgatgtatgcgacatataataaaaactatatacattattaatt 6566961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 22373621 - 22373711
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||||||||| || |||||| ||| || ||||||||||||||| | |||||||||||||||||||||||| ||||| ||| ||||    
T  22373621 taatataagcaaaaatatattttttaaatatattcaattaatgatgtatataacatataataaagaccacatacatcattaactgaatgta 22373711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 25278181 - 25278275
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||||||||||||| ||| ||||||||||||  |||||||||||||||||| | ||||||||||||| | |||  ||||||||| ||||    
T  25278181 tcattaatataagcaaaaatttaccttttagatacatttaattaatgatgtatgtgatacataataaagaccataaacaacattaattgaatgta 25278275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 7837096 - 7837180
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattg 124  Q
    |||||||| |||||||||  ||||||||||||| |||||||||||  ||||||||||||||||||||||| |||||  |||||||    
T  7837096 taatataaacaaaaatctcatttttagatacattcaattaatgataaatgtgacatataataaagaccacgtacatctttaattg 7837180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 5574239 - 5574188
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5574239 taatataagcaaaaatctactttttagatacattcaattaatgatgtatgtg 5574188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 8383316 - 8383233
Alignment:
Q  38 attaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||||||||||||||| |||| |||||||| |||  | ||||||||||||||||  ||||||||||||||  |||||||||||    
T  8383316 attaatataagcaaaaaactacattttagattcatttatttaatgatgtatgtgatctataataaagaccatgtacattattaa 8383233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 3887839 - 3887894
Alignment:
Q  35 atcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgt 90  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||||||||| |||||    
T  3887839 atcactaatataagcaaaaatctattttttagatacattcaattaatgatttatgt 3887894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 15859684 - 15859601
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattatt 119  Q
    |||||| ||||||||||||||||  |||||||| ||| ||||||||||||||| ||| || || || |||| ||||||||||||    
T  15859684 tcattattataagcaaaaatctatattttagattcattcaattaatgatgtatatgatatttattatagacaacatacattatt 15859601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 20504354 - 20504287
Alignment:
Q  58 actttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||||||||||| ||||||||||||||| | ||||||||||||||  | |||||| |||||||||    
T  20504354 actttttagatacattcaattaatgatgtatataacatataataaagattatatacatcattaattga 20504287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 30902402 - 30902351
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| ||||||    
T  30902402 taatataagcaaaaatttactttttagatacattcaattaatgatatatgtg 30902351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 34248426 - 34248476
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgt 90  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||||    
T  34248426 taatataagcaaaaattcactttttagatacattcaattaatgatgtatgt 34248476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 1961435 - 1961355
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||||||||| || |||||||| ||| || | |||||||||||||   |||||||||||||| |||||| |||||||    
T  1961435 tataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtctataataaagaccatatacatcattaatt 1961355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 4898193 - 4898261
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| |||||||||||||||||||  |||||||  |||||||||||| |||||||||    
T  4898193 tactttttaggttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaattga 4898261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 4945587 - 4945655
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| |||||||||||||||||||  |||||||  |||||||||||| |||||||||    
T  4945587 tactttttaggttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaattga 4945655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 20195317 - 20195385
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||| ||| |||||||||||||||||||   ||||||  |||||||||||| |||||||||    
T  20195317 tactttttagattcattcaattaatgatgtatgtgattcataatatggaccacatacatcattaattga 20195385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 20504254 - 20504302
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    |||||||| ||||||||||||||||||||| || |||||||||||||||    
T  20504254 taatataaacaaaaatctactttttagatatattcaattaatgatgtat 20504302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 21488160 - 21488088
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    |||||||||||||||||||  ||| |||||||| ||| || |||||||||||||||   ||||||||||||||    
T  21488160 tcattaatataagcaaaaaattacattttagattcattcatttaatgatgtatgtggtttataataaagacca 21488088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 38465937 - 38465870
Alignment:
Q  21 aagtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    ||||||| |||||| ||| || | ||||||||||||||| |||||||| ||| |||||||||||||||    
T  38465937 aagtacaccctccagtcactattgtaagcaaaaatctacattttagattcattcaattaatgatgtat 38465870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 38594355 - 38594406
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||    
T  38594355 taatataagcaaaaatctactctttagatacattcaactaatgatatatgtg 38594406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 38597951 - 38598002
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||    
T  38597951 taatataagcaaaaatctactctttagatacattcaactaatgatatatgtg 38598002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 43426639 - 43426690
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||| ||||||| |||||||| |||||| ||||||||||||||||||    
T  43426639 taatataagtaaaaatccactttttaaatacattcaattaatgatgtatgtg 43426690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 21183453 - 21183371
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||||| || |||||||| ||| || | |||||||||||||   || ||||||||| |||| |||||||||||||    
T  21183453 tataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtctacaataaagactacatgcattattaattga 21183371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 4563990 - 4563925
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    |||||| ||||||| |  |||||||| |||| | | ||||||||||||||||||||||||||||||    
T  4563990 tataagtaaaaatcaatattttagattcatctattaaatgatgtatgtgacatataataaagacca 4563925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 26003561 - 26003516
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    ||||||||||||||||| |||||||| ||| |||||||||||||||    
T  26003561 tataagcaaaaatctacattttagattcattcaattaatgatgtat 26003516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 38181767 - 38181856
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||| |||||||||||||| |  |||||||| ||| || | ||||||||||||||  || ||||||||| | |||||| |||||||||    
T  38181767 tcattattataagcaaaaatcaatattttagattcattcattaaatgatgtatgtgatctacaataaagactatatacatcattaattga 38181856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 4637115 - 4637051
Alignment:
Q  61 ttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||| ||| ||||||||||||||||||   |||| || ||||||||||||||||| |||||    
T  4637115 ttttagattcattcaattaatgatgtatgtggtttatattatagaccacatacattattgattga 4637051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 9071237 - 9071301
Alignment:
Q  61 ttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||| ||| |||||||||||||||||    ||||||| | |||||||||||||||||||||    
T  9071237 ttttagattcattcaattaatgatgtatgtagtctataatataaaccacatacattattaattga 9071301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 10041574 - 10041638
Alignment:
Q  61 ttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||| |||  |||||||||||||||||   ||||||| ||||||||||||| |||||||||    
T  10041574 ttttagattcatttaattaatgatgtatgtggtttataatatagaccacatacatcattaattga 10041638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 22373740 - 22373688
Alignment:
Q  40 taatataagcaaaaatctacttttt-agatacatccaattaatgatgtatgtg 91  Q
    ||||||||||||||||||| ||||| |||||||| || |||||||||||||||    
T  22373740 taatataagcaaaaatctaattttttagatacattcagttaatgatgtatgtg 22373688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 27331885 - 27331838
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgt 90  Q
    |||||||||||||| || |||||||| ||| |||||||||||||||||    
T  27331885 tataagcaaaaatcaacattttagattcattcaattaatgatgtatgt 27331838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 40320153 - 40320228
Alignment:
Q  50 aaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||| |||||||||| | ||| ||||||||||| |||||||   ||||||   |||||||||||||||||||||    
T  40320153 aaaaatttactttttaggttcattcaattaatgatatatgtgattcataatatgtaccacatacattattaattga 40320228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 3714224 - 3714274
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgt 90  Q
    ||||||||| ||||| | ||||||||||||||| |||||||| ||||||||    
T  3714224 taatataagtaaaaaaccactttttagatacattcaattaattatgtatgt 3714274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 5144296 - 5144362
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||||| | ||| ||||||||||||||||||   |||||||  |||||||||||| |||||||    
T  5144296 tactttttaggttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaatt 5144362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 7079370 - 7079464
Alignment:
Q  29 cctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    ||||| |||| || |||||||||||||| || ||||| || |||||| | |||||| ||||||   |||||| ||||||| |||||| |||||||    
T  7079370 cctccgatcactattataagcaaaaatcaacattttaaattcatccattaaatgatatatgtggtctataattaagaccatatacatcattaatt 7079464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 26003449 - 26003531
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||||| |  |||||| | ||| || | ||||||||||||   ||||||||||||||| |||||| |||||||||    
T  26003449 tataagcaaaaatcaatattttaggttcattcattaaatgatgtatgtagtatataataaagaccatatacatcattaattga 26003531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 125
Target Start/End: Original strand, 38465803 - 38465885
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||||| || ||||||||  || || | |||||||||||||    ||||||||||||| |||||| |||||||||    
T  38465803 tataagcaaaaatcaacattttagattaattcattaaatgatgtatgtggtccataataaagaccatatacatcattaattga 38465885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 37195142 - 37195093
Alignment:
Q  79 aatgatgtatgtgacatataataaagaccacatacattattaattgagtg 128  Q
    |||||||||||||   |||||||||||||| |||||| ||||||||||||    
T  37195142 aatgatgtatgtggtctataataaagaccatatacatcattaattgagtg 37195093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 3098252 - 3098180
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacat 115  Q
    ||||||||||||||||| |||||||| ||| || | ||||||||||| |   ||||||| |||| ||||||||    
T  3098252 tataagcaaaaatctacattttagattcattcattaaatgatgtatgcggtttataatacagactacatacat 3098180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 15080965 - 15080886
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||||||||||| || ||||||||| | ||| || |||||||||||||||    |||||| ||||||||||||| |||||    
T  15080965 aatataagcaaaattc-actttttaggttcattcatttaatgatgtatgtggttcataatatagaccacatacatcattaa 15080886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 17843979 - 17844047
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||| | ||| ||||||||||||||| ||   |||||||  |||||||||||| |||||||||    
T  17843979 tactttttaggttcattcaattaatgatgtatatggtttataatatggaccacatacatcattaattga 17844047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 25270982 - 25270910
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacat 115  Q
    ||||||||||||||||| |||||||| ||| || | ||||||||||| |   ||||||| |||| ||||||||    
T  25270982 tataagcaaaaatctacattttagattcattcattaaatgatgtatgcggtttataatacagactacatacat 25270910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 29771746 - 29771814
Alignment:
Q  57 tactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||||||| ||| |||||||||||||||||||   ||| ||   ||||||||||| |||||||||    
T  29771746 tactttttagattcattcaattaatgatgtatgtgatccatattatgaaccacatacatcattaattga 29771814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 32630413 - 32630465
Alignment:
Q  36 tcattaatataagcaaaaatctactttttagatacatccaattaatgatgtat 88  Q
    |||||| ||||| ||||||||||| |||| ||| ||| |||||||||||||||    
T  32630413 tcattattataaacaaaaatctacattttggattcattcaattaatgatgtat 32630465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 37396236 - 37396300
Alignment:
Q  61 ttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||| ||| ||||||||||||||| |||  |||| || ||||||||||||| ||| |||||    
T  37396236 ttttagattcattcaattaatgatgtatatgatttatattatagaccacatacatcattgattga 37396300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 40187381 - 40187321
Alignment:
Q  31 tccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||||||||| ||||| ||||||| ||| ||||||||  || || |||||||||||||||    
T  40187381 tccaatcattattataaacaaaaatttacattttagattgattcagttaatgatgtatgtg 40187321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 40363233 - 40363305
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacat 115  Q
    |||||||||||| ||||||||||| | |||  ||| ||||||||| ||||  |||| ||| ||||||||||||    
T  40363233 tataagcaaaaaactactttttaggttcattgaataaatgatgtacgtgatctatattaatgaccacatacat 40363305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 41057014 - 41056942
Alignment:
Q  43 tataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacat 115  Q
    ||||||||||||||||| |||||||| ||| || | ||||||||||| |   ||||||| |||| ||||||||    
T  41057014 tataagcaaaaatctacattttagattcattcattaaatgatgtatgcggtttataatacagactacatacat 41056942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 42230535 - 42230614
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||||||||||| |  ||||||||||| ||| || |||||||||||||||   |||||||  |||||||||||| |||||    
T  42230535 aatataagcaaaattg-actttttagattcattcatttaatgatgtatgtggtttataatatggaccacatacatcattaa 42230614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 44274668 - 44274620
Alignment:
Q  42 atataagcaaaaatctactttttagatacatccaattaatgatgtatgt 90  Q
    ||||||||||||||  ||||||||||| ||| |||| ||||||||||||    
T  44274668 atataagcaaaaattcactttttagattcattcaataaatgatgtatgt 44274620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 44402211 - 44402132
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||||||||||| || ||||||||| | ||| || |||||||||||||||    |||||| ||||||||||||| |||||    
T  44402211 aatataagcaaaattc-actttttaggttcattcatttaatgatgtatgtggttcataatatagaccacatacatcattaa 44402132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 54399 - 54489
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| |||||||||||| ||||||||| ||||    
T  54399 taatataagcaaaaatctactttttagatacattcaattaatgatgtatatgatatataataaggaccacatacatcattaattgaatgta 54489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 54522 - 54466
Alignment:
Q  35 atcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||| ||||||||||||||||  ||| ||||||||||| ||||||||||||||||||    
T  54522 atcactaatataagcaaaaattcactctttagatacattcaattaatgatgtatgtg 54466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 120274 - 120184
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattgagtgta 130  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||| |||||| ||||||||||| ||||||||| ||||    
T  120274 taatataagcaaaaatttactttttagatacattcaattaatgatgtatgtgatatacaataaataccacatacatcattaattgaatgta 120184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 120156 - 120207
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||||||||| |  ||||||||||||||| ||||||||||||||||||    
T  120156 taatataagcaaaatttcactttttagatacattcaattaatgatgtatgtg 120207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 4079 - 3998
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    |||||||||||||||| |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||| |||||    
T  4079 taatataagcaaaaatttactttttagatacattcaataaatgttgtatgtgacatataataaagaccacatacatcattaa 3998  T

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Target: scaffold0536; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 3944 - 4012
Alignment:
Q  23 gtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    ||||| |||||  ||| ||||||||||||||||  |||||||| ||||||  | |||||||||||||||    
T  3944 gtacaccctccggtcactaatataagcaaaaatacactttttaaatacattaatttaatgatgtatgtg 4012  T

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Target: scaffold0047 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 61152 - 61263
Alignment:
Q  18 aacaagtacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacatta 117  Q
    ||||| |||| |||||  ||| |||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |    
T  61152 aacaaatacaccctccggtcactaatataagcaaaaatcccttttttagatacattcaattaatgatgtatgtgacatataataaag-ccacatacatca 61250  T
Q  118 ttaattgagtgta 130  Q
    |||||||| ||||    
T  61251 ttaattgaatgta 61263  T

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Target: scaffold0047; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 61291 - 61240
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtg 91  Q
    |||||||| |||||||| || |||||||||||| ||||||||||||||||||    
T  61291 taatataaacaaaaatccacattttagatacattcaattaatgatgtatgtg 61240  T

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Target: scaffold0027 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 17178 - 17260
Alignment:
Q  40 taatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaatt 123  Q
    |||||||||||||| || |||||||| ||| || ||||||||||||||||||||| |||||||| ||||| || || |||||||    
T  17178 taatataagcaaaattc-actttttatatatattcaattaatgatgtatgtgacacataataaaaaccacgtatatcattaatt 17260  T

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Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 7657 - 7736
Alignment:
Q  29 cctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    ||||||||||||||||||||||||||||||  |||||| | | | || |||||||||||||||   ||||||||||||||    
T  7657 cctccaatcattaatataagcaaaaatctatattttaggttcgttcatttaatgatgtatgtggtctataataaagacca 7736  T

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Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 89604 - 89694
Alignment:
Q  35 atcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    ||||||| |||||||||||||| || |||||||| | | || | ||||||||||||||  ||||||||||| || |||||| |||||||||    
T  89604 atcattattataagcaaaaatcaacattttagattctttcattaaatgatgtatgtgatctataataaagatcatatacatcattaattga 89694  T

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Target: scaffold0050 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 6358 - 6274
Alignment:
Q  24 tacaacctccaatcattaatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagacca 108  Q
    |||| |||||| ||||||||||||| |||||  ||| |||||| | ||| || ||||||||||||||||  ||||||||||||||    
T  6358 tacaccctccagtcattaatataagtaaaaaattacattttaggttcattcatttaatgatgtatgtgatctataataaagacca 6274  T

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Target: scaffold0172 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 11701 - 11628
Alignment:
Q  52 aaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||| |||||||||| | ||| ||||||||||||||||||   |||||||  |||||||||||| |||||||||    
T  11701 aaatttactttttaggttcattcaattaatgatgtatgtggtctataatatggaccacatacatcattaattga 11628  T

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Target: scaffold0172; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 11607 - 11680
Alignment:
Q  52 aaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||| |||||||||| | ||| ||||||||||||||||||    ||| || ||||||||||||| |||||||||    
T  11607 aaatttactttttaggttcattcaattaatgatgtatgtggtccatattatagaccacatacatcattaattga 11680  T

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Target: scaffold0635 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 5496 - 5432
Alignment:
Q  61 ttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaattga 125  Q
    |||||||| |||  |||||||||||||||||   ||||||| ||||||||||||| |||||||||    
T  5496 ttttagattcatttaattaatgatgtatgtggtttataatatagaccacatacatcattaattga 5432  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 17561 - 17482
Alignment:
Q  41 aatataagcaaaaatctactttttagatacatccaattaatgatgtatgtgacatataataaagaccacatacattattaa 121  Q
    ||||||||||||| |  ||||||||| | ||| || |||||||||||||||   ||||||| ||||||||||||| |||||    
T  17561 aatataagcaaaattg-actttttaggttcattcatttaatgatgtatgtggtttataatatagaccacatacatcattaa 17482  T

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