View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17260_low_47 (Length: 349)

Name: NF17260_low_47
Description: NF17260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17260_low_47
NF17260_low_47
[»] chr5 (19 HSPs)
chr5 (27-330)||(2686425-2686727)
chr5 (191-307)||(2693727-2693843)
chr5 (27-81)||(19754154-19754208)
chr5 (1-106)||(25524125-25524228)
chr5 (27-81)||(19752934-19752988)
chr5 (17-106)||(25523070-25523156)
chr5 (24-81)||(1796077-1796134)
chr5 (29-106)||(5730442-5730517)
chr5 (26-106)||(22940645-22940722)
chr5 (28-106)||(7311591-7311666)
chr5 (55-106)||(18486954-18487002)
chr5 (57-106)||(5778890-5778936)
chr5 (56-106)||(5777902-5777947)
chr5 (27-85)||(18485157-18485215)
chr5 (17-86)||(2186788-2186857)
chr5 (56-106)||(25056434-25056481)
chr5 (28-80)||(28538700-28538752)
chr5 (26-86)||(33158116-33158176)
chr5 (17-81)||(36486502-36486566)
[»] chr2 (18 HSPs)
chr2 (24-81)||(18868947-18869004)
chr2 (27-81)||(22848214-22848268)
chr2 (25-80)||(16446178-16446233)
chr2 (24-82)||(13567994-13568052)
chr2 (28-106)||(11258836-11258911)
chr2 (28-106)||(18906012-18906087)
chr2 (27-106)||(36449779-36449855)
chr2 (28-106)||(7899907-7899982)
chr2 (38-81)||(11938823-11938866)
chr2 (27-106)||(18904368-18904444)
chr2 (29-80)||(36450947-36450998)
chr2 (28-106)||(38840518-38840593)
chr2 (27-81)||(32739646-32739700)
chr2 (27-80)||(13570581-13570634)
chr2 (55-84)||(21837088-21837117)
chr2 (26-86)||(18300747-18300807)
chr2 (17-84)||(18869177-18869245)
chr2 (28-72)||(23869560-23869604)
[»] chr8 (12 HSPs)
chr8 (27-85)||(1824102-1824160)
chr8 (27-85)||(1858547-1858605)
chr8 (27-106)||(10006345-10006421)
chr8 (27-106)||(24488703-24488785)
chr8 (28-104)||(40471172-40471244)
chr8 (27-106)||(18979144-18979220)
chr8 (17-106)||(30568888-30568973)
chr8 (27-81)||(5514004-5514058)
chr8 (17-106)||(10007777-10007863)
chr8 (17-106)||(12351922-12352008)
chr8 (55-106)||(24483144-24483192)
chr8 (28-80)||(24123923-24123975)
[»] chr1 (16 HSPs)
chr1 (28-104)||(24426100-24426173)
chr1 (27-81)||(45149995-45150049)
chr1 (27-80)||(11437223-11437276)
chr1 (17-106)||(23980480-23980566)
chr1 (27-106)||(11436043-11436119)
chr1 (24-81)||(14999307-14999364)
chr1 (29-81)||(41364851-41364903)
chr1 (26-106)||(45157232-45157308)
chr1 (18-76)||(40384753-40384811)
chr1 (27-81)||(52274991-52275045)
chr1 (27-80)||(24422824-24422877)
chr1 (28-81)||(33088090-33088143)
chr1 (58-106)||(39221359-39221405)
chr1 (37-104)||(52276197-52276261)
chr1 (55-106)||(39222525-39222574)
chr1 (56-106)||(52827348-52827395)
[»] chr7 (17 HSPs)
chr7 (27-106)||(18371425-18371501)
chr7 (27-106)||(7501876-7501952)
chr7 (27-106)||(22629484-22629563)
chr7 (29-106)||(17782579-17782653)
chr7 (27-81)||(47369804-47369858)
chr7 (29-81)||(127359-127411)
chr7 (28-80)||(22630477-22630529)
chr7 (29-81)||(31949828-31949880)
chr7 (29-106)||(3227620-3227694)
chr7 (30-85)||(47524544-47524599)
chr7 (57-106)||(47525421-47525467)
chr7 (27-81)||(18372481-18372535)
chr7 (28-104)||(42886311-42886384)
chr7 (27-80)||(43899470-43899523)
chr7 (29-106)||(3227109-3227182)
chr7 (27-106)||(31659623-31659700)
chr7 (56-106)||(31661062-31661109)
[»] chr3 (22 HSPs)
chr3 (26-106)||(12700176-12700251)
chr3 (27-86)||(8456495-8456554)
chr3 (26-106)||(29932722-29932798)
chr3 (26-106)||(29981876-29981952)
chr3 (17-80)||(54539779-54539842)
chr3 (27-81)||(29931249-29931303)
chr3 (27-81)||(29980403-29980457)
chr3 (27-85)||(47614204-47614262)
chr3 (29-104)||(47610606-47610678)
chr3 (17-81)||(7268841-7268905)
chr3 (27-106)||(54540814-54540890)
chr3 (27-86)||(12703524-12703583)
chr3 (27-85)||(534518-534576)
chr3 (26-106)||(19984850-19984927)
chr3 (27-80)||(7267667-7267720)
chr3 (27-80)||(55192019-55192072)
chr3 (53-81)||(535832-535860)
chr3 (28-80)||(4271464-4271516)
chr3 (28-80)||(6170296-6170348)
chr3 (28-80)||(6249633-6249685)
chr3 (28-80)||(7758426-7758478)
chr3 (55-106)||(47615600-47615648)
[»] chr4 (21 HSPs)
chr4 (26-106)||(26421645-26421721)
chr4 (27-81)||(17383015-17383069)
chr4 (26-104)||(12129626-12129701)
chr4 (29-106)||(25685848-25685922)
chr4 (27-106)||(17388235-17388310)
chr4 (27-106)||(49308051-49308126)
chr4 (27-80)||(52491631-52491684)
chr4 (28-106)||(1963197-1963272)
chr4 (26-85)||(31601008-31601067)
chr4 (53-106)||(48781095-48781145)
chr4 (55-106)||(5526178-5526225)
chr4 (29-106)||(10471414-10471488)
chr4 (29-106)||(13386558-13386633)
chr4 (27-80)||(8758861-8758914)
chr4 (28-81)||(19750600-19750653)
chr4 (28-81)||(19789153-19789206)
chr4 (1-34)||(26421649-26421682)
chr4 (29-106)||(13386015-13386090)
chr4 (56-106)||(25684935-25684982)
chr4 (17-81)||(31599812-31599876)
chr4 (27-79)||(49306799-49306851)
[»] chr6 (12 HSPs)
chr6 (17-106)||(7314881-7314966)
chr6 (29-106)||(8659266-8659340)
chr6 (29-106)||(8821874-8821948)
chr6 (24-106)||(16704518-16704597)
chr6 (28-86)||(16703586-16703643)
chr6 (56-106)||(3721613-3721660)
chr6 (56-106)||(8660256-8660303)
chr6 (57-106)||(17496794-17496844)
chr6 (55-106)||(7316346-7316394)
chr6 (56-84)||(26574639-26574667)
chr6 (27-83)||(26575078-26575134)
chr6 (29-81)||(34834605-34834657)
[»] scaffold2034 (1 HSPs)
scaffold2034 (17-106)||(234-320)
[»] scaffold0059 (1 HSPs)
scaffold0059 (26-106)||(4753-4829)
[»] scaffold0302 (1 HSPs)
scaffold0302 (27-80)||(17494-17547)
[»] scaffold0294 (1 HSPs)
scaffold0294 (27-106)||(5462-5538)


Alignment Details
Target: chr5 (Bit Score: 256; Significance: 1e-142; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 27 - 330
Target Start/End: Original strand, 2686425 - 2686727
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagcatcctaattaatgtacacaa 126  Q
    ||||||| | ||||||||| ||| |||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  2686425 caaaattatagtttttgtacttaagagatcaaaattgcaagtttttaaaagttagagg-agggggaaagtgcactttaacctcctaattaatgtacacaa 2686523  T
Q  127 taatgttaatattgttgtaattaatctaatgttagtttattgtggtaatcttttctatatattccaggtaggtctactatatgatgaggtttcattacat 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2686524 taatgttaatattgttgtaattaatctaatgttagtttattgtggtaatctttcctatatattccaggtaggtctactatatgatgaggtttcattacat 2686623  T
Q  227 aatgtcctggatatgattgctgattggaccaccgaagacagacaatatttaaggaatcaggtaatgaaaaacaacaaattcaaatatatttgttgcctat 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2686624 aatgtcctggatatgattgctgattggaccaccgaagacagacaatatttaagaaatcaggtaatgaaaaacaacaaattcaaatatatttgttgcctat 2686723  T
Q  327 tatt 330  Q
    ||||    
T  2686724 tatt 2686727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 191 - 307
Target Start/End: Original strand, 2693727 - 2693843
Alignment:
Q  191 caggtaggtctactatatgatgaggtttcattacataatgtcctggatatgattgctgattggaccaccgaagacagacaatatttaaggaatcaggtaa 290  Q
    |||||||||||||||||||||||||||||| |||||||||| || ||||||||||| || ||||||   ||||||| ||||||||| |||||||||||||    
T  2693727 caggtaggtctactatatgatgaggtttcactacataatgttctagatatgattgcggactggaccgatgaagacaaacaatatttgaggaatcaggtaa 2693826  T
Q  291 tgaaaaacaacaaattc 307  Q
    ||||||||||| |||||    
T  2693827 tgaaaaacaaccaattc 2693843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 19754154 - 19754208
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||||| ||||||||||||| | | |||||||||||||||||||||||||||    
T  19754154 caaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagttag 19754208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 25524125 - 25524228
Alignment:
Q  1 aattgtagtttttgtacttaggagatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcac 100  Q
    |||| |||||||||||||||||||  ||||||||| ||||||||| ||| | | |||||||| ||| ||||| ||| ||  |||| |||| |||||||||    
T  25524125 aattatagtttttgtacttaggaggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaatt--aggggggggaaaagtgcac 25524222  T
Q  101 tttagc 106  Q
    ||||||    
T  25524223 tttagc 25524228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 19752988 - 19752934
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||||| ||||||||| ||| | | |||||||||||||||||||||||||||    
T  19752988 caaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttag 19752934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 25523156 - 25523070
Alignment:
Q  17 cttaggagatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||| | |||||||||| ||||||||| ||| | | | |||||||||||||||||||||||| |||  |||| |||||||||||||||    
T  25523156 cttagggggtcaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagtta-agg--ggggaaaagtgcactttagc 25523070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 1796134 - 1796077
Alignment:
Q  24 gatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    |||||||||||| ||||||||| ||| | | ||||| |||||||||||||||||||||    
T  1796134 gatcaaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttag 1796077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 5730517 - 5730442
Alignment:
Q  29 aaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||| ||||| ||| ||| ||  |||||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  5730517 aaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagtta-aggg-ggggaaaagtgcactttagc 5730442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 22940645 - 22940722
Alignment:
Q  26 tcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||||||  |||||||| ||| | | |||||||||||||||||||||||||| |||  |||| |||||||||||||||    
T  22940645 tcaaaattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagtta-agg--ggggaaaagtgcactttagc 22940722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 7311666 - 7311591
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||| ||||||||| ||  ||| |||| |||||||||||||||||||||| ||| |||||   ||||||||||||    
T  7311666 aaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagttaggggggggggg---gtgcactttagc 7311591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 18486954 - 18487002
Alignment:
Q  55 ccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||||||||||||||||| |||  ||||||||||||||||||||    
T  18486954 ccaaaattgcaagtttttgaaagtta-agg--gggggaaagtgcactttagc 18487002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 5778890 - 5778936
Alignment:
Q  57 aaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||||||||||||||||||   |||| |||||||||||||||    
T  5778890 aaaattgcaagtttttgaaagttagag---ggggaaaagtgcactttagc 5778936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 5777947 - 5777902
Alignment:
Q  56 caaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||||||||||||||||||||||     ||||||||||||||||||||    
T  5777947 caaaattgcaagtttttgaaagttag-----gggggaaagtgcactttagc 5777902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 18485215 - 18485157
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagaggg 85  Q
    |||||||||||||||  || ||| | | |||||||||||||||||| ||||||||||||    
T  18485215 caaaattgttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggg 18485157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 2186857 - 2186788
Alignment:
Q  17 cttaggagatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagaggga 86  Q
    |||||| ||| |||||||| |||||||||  ||  ||||||||||||||| ||||||||| |||| ||||    
T  2186857 cttaggggattaaaattgtagtttttgtacatagaagaccaaaattgcaactttttgaaacttaggggga 2186788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 25056434 - 25056481
Alignment:
Q  56 caaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||||||||||||||||   |||| || |||||||||||||||    
T  25056434 caaaattgcaagtttttgaaagtta---ggagtggaaaagtgcactttagc 25056481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 28538752 - 28538700
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    |||||||| ||||||||| ||| | |  |||||||||||||||||||||||||    
T  28538752 aaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagtta 28538700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 33158176 - 33158116
Alignment:
Q  26 tcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagaggga 86  Q
    |||||||||| ||||||||| ||| |    |||||||||||||||||||||||||| ||||    
T  33158176 tcaaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttaggggga 33158116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 36486502 - 36486566
Alignment:
Q  17 cttaggagatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    |||||| || ||||||||| ||||||||| ||| | |  ||||||||||||||||| ||||||||    
T  36486502 cttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttag 36486566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 18869004 - 18868947
Alignment:
Q  24 gatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||    
T  18869004 gatcaaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttag 18868947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 22848268 - 22848214
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||||| ||||||||||||| | |||||||||||||||||||||||||||||    
T  22848268 caaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagttag 22848214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 16446233 - 16446178
Alignment:
Q  25 atcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    ||||||||||| |||||||||||||||||   ||||||||||||||||||||||||    
T  16446233 atcaaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagtta 16446178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 13568052 - 13567994
Alignment:
Q  24 gatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttaga 82  Q
    |||||||||||| ||||||||||||| | | |||||||||||||||||||||| |||||    
T  13568052 gatcaaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttaga 13567994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 11258836 - 11258911
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||| ||||||||| ||| | | |||||||||||||||||||||||||||||    ||||||| |||||||||||    
T  11258836 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagag---aggggaaaatgcactttagc 11258911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 18906012 - 18906087
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||| ||||||||| ||| | | | ||||||||||||||||||||||||||   ||||| |||||||||||||||    
T  18906012 aaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaga---aggggaaaagtgcactttagc 18906087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 36449855 - 36449779
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||||| ||||||||| ||| | | |||||||||||||||||||||||||| |||  |||| |||||||||||||||    
T  36449855 caaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta-agg--ggggaaaagtgcactttagc 36449779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 7899907 - 7899982
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||| |||| |||| ||| | |||||||||||||||||||||||||||| |||  |||| |||||||||||||||    
T  7899907 aaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagtta-agg--ggggaaaagtgcactttagc 7899982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 11938823 - 11938866
Alignment:
Q  38 tttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    |||||||| ||| |||||||||||||||||||||||||||||||    
T  11938823 tttttgtacttaggagaccaaaattgcaagtttttgaaagttag 11938866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 18904444 - 18904368
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||||| ||||||||| ||| | | ||||||||||| |||||||||||||| |||  |||| |||||||||||||||    
T  18904444 caaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagtta-agg--ggggaaaagtgcactttagc 18904368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 36450947 - 36450998
Alignment:
Q  29 aaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    ||||||| |||| |||| ||| | ||||||||||||||||||||||||||||    
T  36450947 aaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagtta 36450998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 38840518 - 38840593
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||| ||||||||| ||| | | | |||||||||||||||||||||||| |||  |||| |||||||||||||||    
T  38840518 aaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagtta-agg--ggggaaaagtgcactttagc 38840593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 32739700 - 32739646
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||||| |||||||||  || | | |||||||||||||||||||||||||||    
T  32739700 caaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagttag 32739646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 13570581 - 13570634
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    ||||||| | ||||||||| ||| | ||| ||||||||||||||||||||||||    
T  13570581 caaaattatagtttttgtacttaagggactaaaattgcaagtttttgaaagtta 13570634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 84
Target Start/End: Complemental strand, 21837117 - 21837088
Alignment:
Q  55 ccaaaattgcaagtttttgaaagttagagg 84  Q
    ||||||||||||||||||||||||||||||    
T  21837117 ccaaaattgcaagtttttgaaagttagagg 21837088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 18300747 - 18300807
Alignment:
Q  26 tcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagaggga 86  Q
    |||||||||| ||||||||| ||| | |  ||||||||||||||| |||||||||| ||||    
T  18300747 tcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttatgaaagttaggggga 18300807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 18869177 - 18869245
Alignment:
Q  17 cttaggagatcaaaattgttgtttttgtatttatgagaccaaaattgc-aagtttttgaaagttagagg 84  Q
    |||||| ||| |||||||| ||||||||| |||  || |||||||||| || |||||||||||||||||    
T  18869177 cttaggggataaaaattgtagtttttgtacttagaaggccaaaattgccaaatttttgaaagttagagg 18869245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 23869560 - 23869604
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagttttt 72  Q
    |||||||| ||||||||||||| | | ||||||||||||||||||    
T  23869560 aaaattgtagtttttgtatttagggggccaaaattgcaagttttt 23869604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 1824102 - 1824160
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagaggg 85  Q
    ||||||||| ||||||||| ||| | |||||||||||||||||||||||||||||||||    
T  1824102 caaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagaggg 1824160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 1858547 - 1858605
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagaggg 85  Q
    ||||||||| ||||||||| ||| | |||||||||||||||||||||||||||||||||    
T  1858547 caaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagttagaggg 1858605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 10006421 - 10006345
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||||||  || ||| | | |||||||||||||||||||||||||||||   |||| |||||||||||||||    
T  10006421 caaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagag---ggggaaaagtgcactttagc 10006345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 24488703 - 24488785
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggaggggga---aagtgcactttagc 106  Q
    |||||||||||||||  |||||| | | ||||||||||||||||||||||||||| ||| |||||    ||||||||||||||    
T  24488703 caaaattgttgttttgatatttagggggccaaaattgcaagtttttgaaagttagggggggggggggggaagtgcactttagc 24488785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 40471172 - 40471244
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcacttta 104  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| ||   |||| |||||||||||||    
T  40471172 aaaattgtagtttttgtatttatg-gaccaaaattgtaagttttttaaagttaaag---ggggaaaagtgcacttta 40471244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 18979144 - 18979220
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||||| |||||| |||||| | | ||||||||||||||| ||||||||||   || |||| |||||||||||||||    
T  18979144 caaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagtta---gggggggaaaagtgcactttagc 18979220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 30568973 - 30568888
Alignment:
Q  17 cttaggagatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||| |||||||||| | |||||||||  || |||| |||||||| || ||||||||| ||||||||    |||||||||||||||||    
T  30568973 cttaggggatcaaaattatagtttttgtacctaagagatcaaaattgtaactttttgaaacttagaggg----ggaaagtgcactttagc 30568888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 5514058 - 5514004
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||||| ||||||||| ||| | | ||||||||| |||||||||||||||||    
T  5514058 caaaattgtagtttttgtacttagggggccaaaattggaagtttttgaaagttag 5514004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 10007777 - 10007863
Alignment:
Q  17 cttaggagatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||| || ||||||||| |||| | || ||| | | |||||||||||||||||||||||||| |||  |||| |||||||||||||||    
T  10007777 cttaggggaccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagtta-agg--ggggaaaagtgcactttagc 10007863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 12352008 - 12351922
Alignment:
Q  17 cttaggagatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||| | |||||||||| ||||||||| ||| | |  ||||||||||| ||||||||||||| |||  |||||||| |||||||||||    
T  12352008 cttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagtta-agg--gggggaaaatgcactttagc 12351922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 106
Target Start/End: Complemental strand, 24483192 - 24483144
Alignment:
Q  55 ccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||||||||||||| |||   ||||||| |||||||||||||||    
T  24483192 ccaaaattgcaagtttttgaaaatta---ggaggggaaaagtgcactttagc 24483144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 24123923 - 24123975
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    ||||||||  |||| ||| ||| ||| ||||||||||||||||||||||||||    
T  24123923 aaaattgtaattttagtacttaagaggccaaaattgcaagtttttgaaagtta 24123975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 24426100 - 24426173
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcacttta 104  Q
    |||||||| ||||||||| ||| | | |||||||||||||||||||||||||||||   ||||||||||||||||||    
T  24426100 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttagag---gggggaaagtgcacttta 24426173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 45149995 - 45150049
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||||||||||||||| ||| | | |||||||||||||||||||||||||||    
T  45149995 caaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagttag 45150049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 11437223 - 11437276
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    ||||||||| ||||||||| ||| | ||||||||||||||||||||||||||||    
T  11437223 caaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagtta 11437276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 23980480 - 23980566
Alignment:
Q  17 cttaggagatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||||| ||||||| | ||||||||| ||| |   |||||||||||||||||| ||||||||||   |||| |||||||||||||||    
T  23980480 cttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagag---ggggaaaagtgcactttagc 23980566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 11436119 - 11436043
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||||| |||||| || |||  || |||||||||||||||||||||||||| ||   |||| |||||||||||||||    
T  11436119 caaaattgtagtttttatacttaaaaggccaaaattgcaagtttttgaaagttaaag---ggggaaaagtgcactttagc 11436043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 14999364 - 14999307
Alignment:
Q  24 gatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    |||||||||||| ||||||||| ||| | |  ||||||||||||||||||||||||||    
T  14999364 gatcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttag 14999307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 41364903 - 41364851
Alignment:
Q  29 aaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||| ||||| ||||||| | | |||||||||||||||||||||||||||    
T  41364903 aaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttag 41364851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 45157232 - 45157308
Alignment:
Q  26 tcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||| |||||||||  || | | |||||||||||||||||||||| |||    | ||||||||||||||||||||    
T  45157232 tcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaactta----gggggggaaagtgcactttagc 45157308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 40384811 - 40384753
Alignment:
Q  18 ttaggagatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaa 76  Q
    ||||| |||||||||||| |||||||||  || ||||| |||||||||| |||||||||    
T  40384811 ttaggggatcaaaattgtagtttttgtacataggagactaaaattgcaactttttgaaa 40384753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 52275045 - 52274991
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||||| ||||||||| ||| | |  ||||||||||||||||||||||||||    
T  52275045 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttag 52274991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 24422877 - 24422824
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    ||||||||| ||||||||| ||| | |  |||||||||||||||||||||||||    
T  24422877 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtta 24422824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 33088143 - 33088090
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    |||||||| |||||| |||||| ||||  |||||| ||||||||||||||||||    
T  33088143 aaaattgtagtttttatatttaggagataaaaattacaagtttttgaaagttag 33088090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 39221405 - 39221359
Alignment:
Q  58 aaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||||||||||||||||||  |||| |||||||| ||||||    
T  39221405 aaattgcaagtttttgaaagttagagg--ggggaaaagtgcaatttagc 39221359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 52276197 - 52276261
Alignment:
Q  37 gtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcacttta 104  Q
    ||||||||| ||| | | |||||||| ||| |||||||||||||||   |||||||||||||||||||    
T  52276197 gtttttgtacttagggggccaaaattacaaatttttgaaagttaga---agggggaaagtgcacttta 52276261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 39222525 - 39222574
Alignment:
Q  55 ccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||||||||||||||||| |||  |||  |||||||||||||||    
T  39222525 ccaaaattgcaagtttttgaaagttaaagg--gggtaaaagtgcactttagc 39222574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 52827395 - 52827348
Alignment:
Q  56 caaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||||||||||||||||   || |||| |||||||||||||||    
T  52827395 caaaattgcaagtttttgaaagtta---gggggggaaaagtgcactttagc 52827348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 18371501 - 18371425
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||||| ||||||||| ||| | | ||||||||||||||||||||||||||   ||||||| |||||||||||||||    
T  18371501 caaaattgtagtttttgtacttaaggggccaaaattgcaagtttttgaaagtta---ggaggggaaaagtgcactttagc 18371425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 7501876 - 7501952
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||||||  || ||| | | |||||||||||||||||||||||||||||   |||| |||||||||||||||    
T  7501876 caaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagag---ggggaaaagtgcactttagc 7501952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 22629563 - 22629484
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaag-tgcactttagc 106  Q
    ||||||||| ||||||||| ||| ||| |||||||| ||||||||||||| ||| |||||||||||||  |||||||||||    
T  22629563 caaaattgtagtttttgtacttaggaggccaaaattacaagtttttgaaaatta-agggagggggaaaaatgcactttagc 22629484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 17782579 - 17782653
Alignment:
Q  29 aaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||| ||||| ||| ||| | | |||||||||||||||||||||||||||||   |||| |||||||||||||||    
T  17782579 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagag---ggggaaaagtgcactttagc 17782653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 47369858 - 47369804
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||| | ||||||||| ||||||| | |||||||||||||||||||||||||    
T  47369858 caaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagttag 47369804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 127411 - 127359
Alignment:
Q  29 aaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||| ||||| ||| ||| | |||||||||||||||||||||||||||||    
T  127411 aaattgtggttttggtacttaggggaccaaaattgcaagtttttgaaagttag 127359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 22630477 - 22630529
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    |||||||| ||||||||| ||| | | ||||||||||||||||||||||||||    
T  22630477 aaaattgtagtttttgtaattagggggccaaaattgcaagtttttgaaagtta 22630529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 31949828 - 31949880
Alignment:
Q  29 aaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||| ||||| ||||||| | | |||||||||||||||||||||||||||    
T  31949828 aaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagttag 31949880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 3227620 - 3227694
Alignment:
Q  29 aaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||| ||||| ||| ||| | | ||||||||||||||||||||||||||   || |||| |||||||||||||||    
T  3227620 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagtta---gggggggaaaagtgcactttagc 3227694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 47524599 - 47524544
Alignment:
Q  30 aattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagaggg 85  Q
    |||||| ||||| ||| ||| | | |||||||||||||||||||||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagaggg 47524544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 47525421 - 47525467
Alignment:
Q  57 aaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||||||||||||||||||   |||| |||||||||||||||    
T  47525421 aaaattgcaagtttttgaaagttagag---ggggaaaagtgcactttagc 47525467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 18372481 - 18372535
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||||| ||||||||| ||| | | |||||||||||||||||||||| ||||    
T  18372481 caaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaaattag 18372535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 42886311 - 42886384
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcacttta 104  Q
    |||||||| ||||||||||||| | |  ||||||||||| |||||||||||||   ||||| | |||||||||||||    
T  42886311 aaaattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaagtta---ggaggagaaaagtgcacttta 42886384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 43899523 - 43899470
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    |||||||||  ||||| ||||||  ||| |||||||||||||||||||||||||    
T  43899523 caaaattgtaatttttatatttagaagatcaaaattgcaagtttttgaaagtta 43899470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 3227182 - 3227109
Alignment:
Q  29 aaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||| ||||| ||| ||| | | |||||||||||||||||||||| |||    | ||||||||||||||||||||    
T  3227182 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaatta----gggggggaaagtgcactttagc 3227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 31659700 - 31659623
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||||| ||||||||| ||| | |  |||||||| |||||||||||||||  |||| |||  |||||||||||||||    
T  31659700 caaaattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaagtt--agggggggtaaaagtgcactttagc 31659623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 31661062 - 31661109
Alignment:
Q  56 caaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||||||| ||||||||||||||||    |||||||||||||||||||    
T  31661062 caaaattgcaaatttttgaaagttagag---aggggaaagtgcactttagc 31661109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 12700251 - 12700176
Alignment:
Q  26 tcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||| ||||||||| ||| | | |||||||||||||||||||||||||||     ||||||||||||||||||||    
T  12700251 tcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttag-----gggggaaagtgcactttagc 12700176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 8456554 - 8456495
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagaggga 86  Q
    ||||||||| ||||||||||||| | |||||||||||||||||||||||| |||| ||||    
T  8456554 caaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaaattaggggga 8456495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 29932722 - 29932798
Alignment:
Q  26 tcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||| ||||||||| ||| | | |||||||||||||||||||||||||||||   |||| |||||||||||||||    
T  29932722 tcaaaattgtagtttttgtacttagggg-ccaaaattgcaagtttttgaaagttagag---ggggaaaagtgcactttagc 29932798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 29981876 - 29981952
Alignment:
Q  26 tcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||| ||||||||| ||| | | |||||||||||||||||||||||||||||   |||| |||||||||||||||    
T  29981876 tcaaaattgtagtttttgtacttagggg-ccaaaattgcaagtttttgaaagttagag---ggggaaaagtgcactttagc 29981952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 54539842 - 54539779
Alignment:
Q  17 cttaggagatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    |||||| |||||||||||| ||||||||||||| | |   ||||||||||||||||||||||||    
T  54539842 cttaggggatcaaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagtta 54539779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 29931303 - 29931249
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||||| ||||||||||||| | | | |||||||||||||||||||||||||    
T  29931303 caaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttag 29931249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 29980457 - 29980403
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||||| ||||||||||||| | | | |||||||||||||||||||||||||    
T  29980457 caaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttag 29980403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 47614262 - 47614204
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagaggg 85  Q
    |||||||||||||||  || ||| | | |||||||||||||||||||||||||||||||    
T  47614262 caaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagttagaggg 47614204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 47610606 - 47610678
Alignment:
Q  29 aaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcacttta 104  Q
    ||||||| ||||| ||| ||| | | |||||||||||||||||||||||||||||   |||| |||||||||||||    
T  47610606 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagag---ggggaaaagtgcacttta 47610678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 7268841 - 7268905
Alignment:
Q  17 cttaggagatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||||  ||||||||| |||| | || ||| ||| |||||||||||||||||||||||||||    
T  7268841 cttaggaggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagttag 7268905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 54540814 - 54540890
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||||| ||||||||| ||| | |  ||||||||||||||||||||||||| |||  |||| |||||||||||||||    
T  54540814 caaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagtta-agg--ggggaaaagtgcactttagc 54540890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 12703524 - 12703583
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagaggga 86  Q
    ||||||||| ||||||||| ||| | | |||||||| ||| |||||||||||||||||||    
T  12703524 caaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagttagaggga 12703583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 534576 - 534518
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagaggg 85  Q
    ||||||||| |||||||||  || |||  ||||||||||||||||||| ||||||||||    
T  534576 caaaattgtagtttttgtacataggaggtcaaaattgcaagtttttgagagttagaggg 534518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 19984927 - 19984850
Alignment:
Q  26 tcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||| |||||||||  || | | |||||||||||||||||||||| |||   || |||| |||||||||||||||    
T  19984927 tcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttgaaactta---gggggggaaaagtgcactttagc 19984850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 7267720 - 7267667
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    ||||||||| |||| |||| ||| | | ||||||||||||||||||||||||||    
T  7267720 caaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagtta 7267667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 55192019 - 55192072
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    ||||||||| ||||||||| |||   | ||||||||||||||||||||||||||    
T  55192019 caaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagtta 55192072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 81
Target Start/End: Original strand, 535832 - 535860
Alignment:
Q  53 gaccaaaattgcaagtttttgaaagttag 81  Q
    |||||||||||||||||||||||||||||    
T  535832 gaccaaaattgcaagtttttgaaagttag 535860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 4271516 - 4271464
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    |||||||| |||||| |||||| |||| ||||||| ||| |||||||||||||    
T  4271516 aaaattgtagtttttatatttaagagatcaaaattacaaatttttgaaagtta 4271464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 6170348 - 6170296
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    ||||||||  |||||||| ||| | || |||||||||||||||||||||||||    
T  6170348 aaaattgtaatttttgtacttaagggatcaaaattgcaagtttttgaaagtta 6170296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 6249685 - 6249633
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    |||||||| ||||||||| ||| | ||  ||||||||||||||||||||||||    
T  6249685 aaaattgtagtttttgtacttaagggattaaaattgcaagtttttgaaagtta 6249633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 7758478 - 7758426
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    |||||||| ||||||||| ||| | |  |||||||||||||||||||||||||    
T  7758478 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtta 7758426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 47615600 - 47615648
Alignment:
Q  55 ccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||||||||||||||||| |||  |||| |||||||||||||||    
T  47615600 ccaaaattgcaagtttttgaaagtta-agg--ggggaaaagtgcactttagc 47615648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 26421645 - 26421721
Alignment:
Q  26 tcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||| ||||||||| ||| |||  ||||||||||||||||||||||||||||||    | |||||||||||||||    
T  26421645 tcaaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagttagaggg----gaaaagtgcactttagc 26421721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 17383069 - 17383015
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||||| ||||||||| ||| | |||||||||||||||||||||||||||||    
T  17383069 caaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttag 17383015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 12129701 - 12129626
Alignment:
Q  26 tcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcacttta 104  Q
    |||||||||| ||||||||| ||| | | ||||||||||||||||||||||||||    |||||| |||||||||||||    
T  12129701 tcaaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagtta---agaggggaaaagtgcacttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 25685848 - 25685922
Alignment:
Q  29 aaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||| ||||| ||| ||| | | |||||||||||||||||||||||||||||   |||| |||||||||||||||    
T  25685848 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagag---ggggaaaagtgcactttagc 25685922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 17388235 - 17388310
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||||| |||| |||| ||| | ||||||||||||||||||||||||||||| |||    | |||||||||||||||    
T  17388235 caaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagttaggggg----gaaaagtgcactttagc 17388310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 49308051 - 49308126
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||||| ||||||||| ||| | | ||||||||||||||||||||||||||| |||    | |||||||||||||||    
T  49308051 caaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaggggg----gaaaagtgcactttagc 49308126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 52491631 - 52491684
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    ||||||||| |||| ||||||||   ||||||||||||||||||||||||||||    
T  52491631 caaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagtta 52491684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 1963272 - 1963197
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||| |||||||||  || ||| |||||||||||| ||||||||||||| |||  |||| |||||||||||||||    
T  1963272 aaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagtta-agg--ggggaaaagtgcactttagc 1963197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 31601008 - 31601067
Alignment:
Q  26 tcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagaggg 85  Q
    |||||||||| ||||||||| ||| | |  ||||||||||||||||| ||||||||||||    
T  31601008 tcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggg 31601067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 106
Target Start/End: Original strand, 48781095 - 48781145
Alignment:
Q  53 gaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||||| ||||||||||||||||   |||| |||||||||||||||    
T  48781095 gaccaaaattgcaaatttttgaaagttagag---ggggaaaagtgcactttagc 48781145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 5526178 - 5526225
Alignment:
Q  55 ccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||||||||||||||||||||||    | |||||||||||||||    
T  5526178 ccaaaattgcaagtttttgaaagttagaggg----gaaaagtgcactttagc 5526225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 10471414 - 10471488
Alignment:
Q  29 aaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||| ||||| ||| ||| | | |||||||||||||||||||||||||| |||  |||| |||||||||||||||    
T  10471414 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagtta-agg--ggggaaaagtgcactttagc 10471488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 13386558 - 13386633
Alignment:
Q  29 aaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||| ||||| ||| ||||| |  ||||||||||||||||||||||||  |||| |||  |||||||||||||||    
T  13386558 aaattgtggttttggtacttatggggtcaaaattgcaagtttttgaaagtt--agggggggaaaaagtgcactttagc 13386633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 8758861 - 8758914
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    ||||||||| |||| |||| ||| | | ||||||||||||||||||||||||||    
T  8758861 caaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagtta 8758914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 19750600 - 19750653
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    |||||||| ||||||||| ||| | | |||||||||||||||||| ||||||||    
T  19750600 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttag 19750653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 19789206 - 19789153
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    |||||||| ||||||||| ||| | | |||||||||||||||||| ||||||||    
T  19789206 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttag 19789153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 26421649 - 26421682
Alignment:
Q  1 aattgtagtttttgtacttaggagatcaaaattg 34  Q
    |||||||||||||||||||||||| |||||||||    
T  26421649 aattgtagtttttgtacttaggaggtcaaaattg 26421682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 13386090 - 13386015
Alignment:
Q  29 aaattgttgtttttgtatttatgagaccaaaattgcaagt-ttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||| ||||| ||| ||| | | |||||||||||||| |||||||||||||||   |||| |||||||||||||||    
T  13386090 aaattgtggttttggtacttagggggccaaaattgcaagttttttgaaagttagag---ggggaaaagtgcactttagc 13386015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 25684982 - 25684935
Alignment:
Q  56 caaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||||||||||||||||   || |||| |||||||||||||||    
T  25684982 caaaattgcaagtttttgaaagtta---gggggggaaaagtgcactttagc 25684935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 31599876 - 31599812
Alignment:
Q  17 cttaggagatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    |||||| || ||||||||| ||||||||| ||| | |  ||||||||||||||||| ||||||||    
T  31599876 cttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttag 31599812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 49306851 - 49306799
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtt 79  Q
    ||||||||| ||||||||| |||   | |||||||||||||||||||||||||    
T  49306851 caaaattgtagtttttgtacttaaatggccaaaattgcaagtttttgaaagtt 49306799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 7314966 - 7314881
Alignment:
Q  17 cttaggagatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||| | ||||||||||||||||  || ||| | | |||||||||||||||||||||||||||||   |||| |||||||||||||||    
T  7314966 cttagggggtcaaaattgttgttttgatacttagggg-ccaaaattgcaagtttttgaaagttagag---ggggaaaagtgcactttagc 7314881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 8659340 - 8659266
Alignment:
Q  29 aaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||| ||||| ||| ||| | | |||||||||||||||||||||||||||||   |||| |||||||||||||||    
T  8659340 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagag---ggggaaaagtgcactttagc 8659266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 8821948 - 8821874
Alignment:
Q  29 aaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||| ||||| ||| ||| | | |||||||||||||||||||||||||||||   |||| |||||||||||||||    
T  8821948 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagag---ggggaaaagtgcactttagc 8821874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 16704518 - 16704597
Alignment:
Q  24 gatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||| ||||||||| ||| | |  ||||||||||||||||||||||||| |||||  || |||||||||||||||    
T  16704518 gatcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtta-aggga--ggaaaagtgcactttagc 16704597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 16703643 - 16703586
Alignment:
Q  28 aaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagaggga 86  Q
    |||||||| ||||||||||||||| || |||||||||||||||||||||| ||| ||||    
T  16703643 aaaattgtagtttttgtatttatg-gatcaaaattgcaagtttttgaaagataggggga 16703586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 3721660 - 3721613
Alignment:
Q  56 caaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||||||||||||||||||||||||   |||| |||||||||||||||    
T  3721660 caaaattgcaagtttttgaaagttagag---ggggaaaagtgcactttagc 3721613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 8660256 - 8660303
Alignment:
Q  56 caaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||||||||||||||||   ||||||| |||||||||||||||    
T  8660256 caaaattgcaagtttttgaaagtta---ggaggggaaaagtgcactttagc 8660303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 17496844 - 17496794
Alignment:
Q  57 aaaattgcaagtttttgaaagttagagggaggggg-aaagtgcactttagc 106  Q
    ||||||| ||||||||||||||||| ||||||||| ||| |||||||||||    
T  17496844 aaaattgtaagtttttgaaagttagggggagggggaaaaatgcactttagc 17496794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 7316346 - 7316394
Alignment:
Q  55 ccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||||||||||||||||||| |||  |||| |||||||||||||||    
T  7316346 ccaaaattgcaagtttttgaaagtta-agg--ggggaaaagtgcactttagc 7316394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 84
Target Start/End: Complemental strand, 26574667 - 26574639
Alignment:
Q  56 caaaattgcaagtttttgaaagttagagg 84  Q
    |||||||||||||||||||||||||||||    
T  26574667 caaaattgcaagtttttgaaagttagagg 26574639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 26575078 - 26575134
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagag 83  Q
    ||||||||| ||||||||| ||| | |   |||||||||||||||||||||||||||    
T  26575078 caaaattgtagtttttgtacttaaggggttaaaattgcaagtttttgaaagttagag 26575134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 34834605 - 34834657
Alignment:
Q  29 aaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttag 81  Q
    ||||||| |||||  || ||| |||| ||||||||||||||||||||||||||    
T  34834605 aaattgtggttttgatacttaggagatcaaaattgcaagtttttgaaagttag 34834657  T

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Target: scaffold2034 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 320 - 234
Alignment:
Q  17 cttaggagatcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||| || ||||||| | |||||||||  || | |||||||||||||| ||||||||||||| |||  ||||||||||||||||||||    
T  320 cttaggggaccaaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagtta-agg--gggggaaagtgcactttagc 234  T

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Target: scaffold0059 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 4753 - 4829
Alignment:
Q  26 tcaaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    |||||||||| |||| |||||||| | | ||||||||||| |||||| ||||||  |||||  ||||||||||||||||||    
T  4753 tcaaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagtt--aggga--gggaaagtgcactttagc 4829  T

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Target: scaffold0302 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 17547 - 17494
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagtta 80  Q
    ||||||||| ||||||||| ||| | | |||||||||||||||||| |||||||    
T  17547 caaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtta 17494  T

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Target: scaffold0294 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 5462 - 5538
Alignment:
Q  27 caaaattgttgtttttgtatttatgagaccaaaattgcaagtttttgaaagttagagggagggggaaagtgcactttagc 106  Q
    ||||||||| ||||||||| ||| | |  ||||||||||||||||||||| |||   || |||| |||||||||||||||    
T  5462 caaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaaatta---gggggggaaaagtgcactttagc 5538  T

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