View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17260_low_79 (Length: 248)
Name: NF17260_low_79
Description: NF17260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17260_low_79 |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 35916831 - 35916615
Alignment:
| Q |
18 |
gaatttagtggcgaattgagtgatttcatcactagagatgttcgtgagcgctatactcatgtcaaagattacattcatgtcacactcattgaggtatcta |
117 |
Q |
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| T |
35916831 |
gaatttagtggtgaattgagtgatttcatcactagagatgttcgtgagcgctatactcatgtcaaagattacattcatgtcacactcattgaggtatcta |
35916732 |
T |
|
| Q |
118 |
atttatatattgaagtctattttgtgtgctgaggttgttaaatatattaaccgtgtacttaaccactgtgtgtaacttttcataattaggcaaatgagat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35916731 |
atttatatattgaagtctattttgtgtgctgaggttgttaaatatattaaccacgtacttaaccactgtgtgtaacttttcataattaggcaaatgagat |
35916632 |
T |
|
| Q |
218 |
actttcatcctttgatg |
234 |
Q |
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||||||||||||||||| |
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| T |
35916631 |
actttcatcctttgatg |
35916615 |
T |
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