View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17262_low_8 (Length: 217)
Name: NF17262_low_8
Description: NF17262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17262_low_8 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 7465104 - 7464892
Alignment:
| Q |
5 |
ataatatcctctcagccaccgtaataaaaagacctccaccaactgttcatttcactttccattattttggtctgtaagttgatgaaccaccatgctctga |
104 |
Q |
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| T |
7465104 |
ataatatcctctgaatctccgtcataaaaattcctccaccaattgttcatttcacgttccattattttggtctgtaagttgatgaaccaccatgctctga |
7465005 |
T |
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| Q |
105 |
atgttacttgtccttgatgttgcaatagcaatagcaagagcctccgcttttcttaaccaatcttccatcgtcgatctcctgcagcatcatttgggtcgag |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
7465004 |
atgttacttgtccttgatgttgcaatagcaatagcaagagcctccgcttttcttaaccaatcttccatcgtcgatctcctgcagcaccatttgggtcgac |
7464905 |
T |
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| Q |
205 |
catgtagtatgct |
217 |
Q |
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|||||| |||||| |
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| T |
7464904 |
catgtactatgct |
7464892 |
T |
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