View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17264_high_39 (Length: 301)
Name: NF17264_high_39
Description: NF17264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17264_high_39 |
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Alignment Details
Target: chr7 (Bit Score: 176; Significance: 8e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 11 - 277
Target Start/End: Original strand, 2491264 - 2491536
Alignment:
| Q |
11 |
ttatactcatgttccaatccacaatataatatatcatatttacaactaagtatttgatatattcacaaagcttnnnnnnnnntatatcttaattaaagac |
110 |
Q |
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| T |
2491264 |
ttatactcatgttccaatccacaaaataatttatcatatttacaactaagtatttgatatattcacaaagattaaaaaaaaat-tatcttaattaaagat |
2491362 |
T |
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| Q |
111 |
taaaaaacacaaacatgttattttatt------tgagaccgactttgaatatcaaagctaactaacatagacatatttgtgataaaa-ttactcatgttt |
203 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||| |
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| T |
2491363 |
taaaaaacacaaacatgttattttattcaaacatgagaccgactttgaatatcaaagctaactaacataaacatgtttgtgataaaaattactcatgttt |
2491462 |
T |
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| Q |
204 |
catccacaaaataattaatcatatttagaagtaagtatttgatatatgtcataaagatttgacaaagttttacc |
277 |
Q |
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|||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2491463 |
catccacaaaataatttatcatatttagaactaagtatttgatatatgtcataaagatttgacaaagttttacc |
2491536 |
T |
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