View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17264_high_46 (Length: 293)
Name: NF17264_high_46
Description: NF17264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17264_high_46 |
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Alignment Details
Target: chr7 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 99 - 278
Target Start/End: Complemental strand, 4504450 - 4504272
Alignment:
| Q |
99 |
cattgttcttaaacactcctttctgaaagggaaatgcaaaaggatcatttacataatttttaaactgtctctgaagtttcttttcttctgttatcgccat |
198 |
Q |
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| T |
4504450 |
cattgttcttaaacactcctttctgaaagggaaatgcaaaaggatcatttacataatttttaaactgtctctgaagtttc-tttcttctgttatcgccat |
4504352 |
T |
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| Q |
199 |
ctggatacttgtaacacatagagttgaagaataagattgaagnnnnnnntaaagaaaagttgcaactaagggaagagact |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
4504351 |
ctggatacttgtaacacatagagttgaagaataagattgaagaaaaaaataaagaaaagttgcaactaagggaagagact |
4504272 |
T |
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