View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17264_high_51 (Length: 257)
Name: NF17264_high_51
Description: NF17264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17264_high_51 |
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Alignment Details
Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 25 - 177
Target Start/End: Original strand, 17290293 - 17290445
Alignment:
| Q |
25 |
caatggatggaaatttacaagatgtatatatgatcattcctcaaagagtgactatcacacaacctaataaactatggaagcttttgaagtccttacatgc |
124 |
Q |
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| T |
17290293 |
caatggatggaaatttacaagatgtatatatgatcatccctcaaagagtgactaccacacaacctaataaagtatggaagcttttgaagtccttaaatgc |
17290392 |
T |
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| Q |
125 |
cttaaacaggctattcaaaaatgtgtgaaaatcttacacttcttttactacag |
177 |
Q |
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| T |
17290393 |
cttaaatcggctattcgaaaatgtgtgaaaatcttacacttctcttattacag |
17290445 |
T |
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Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 17291005 - 17291074
Alignment:
| Q |
180 |
tagccgatcgtatcgacactctacactccattgctagattctatttcttccttagatcttctttcatttc |
249 |
Q |
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| T |
17291005 |
tagccggttgtatcgacactctacgctccattgttagattatgtttcttccttagatcttctttcatttc |
17291074 |
T |
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