View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17264_high_73 (Length: 206)
Name: NF17264_high_73
Description: NF17264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17264_high_73 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 8186964 - 8186792
Alignment:
| Q |
18 |
aacattgctagacaacagtttcaacaattccttgtaagtgtctccttttcaatttcttattttcgaaattaattgattcatattcgagatttgataactt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8186964 |
aacattgctagacaacagtttcaacaattccttgtaagtgtctccttttcaatttcttattttcgaaattaattgattcatattcgagatttgataactt |
8186865 |
T |
|
| Q |
118 |
ggtccaaactttaaatttaaacctcaaagtctactcttgatgcaagataatgttttgttttgttaatattcat |
190 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8186864 |
ggtccaaactttaaatgtaaacctcaaagtctactcttgatgcaagataatgttttgttttgttaatattcat |
8186792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University