View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17264_low_19 (Length: 436)

Name: NF17264_low_19
Description: NF17264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17264_low_19
NF17264_low_19
[»] chr6 (16 HSPs)
chr6 (16-419)||(12700442-12700841)
chr6 (365-419)||(9111033-9111087)
chr6 (371-419)||(12333589-12333637)
chr6 (379-419)||(33938700-33938740)
chr6 (371-419)||(34701139-34701187)
chr6 (372-419)||(655770-655817)
chr6 (376-419)||(3923170-3923213)
chr6 (372-419)||(29335596-29335643)
chr6 (372-419)||(32053781-32053828)
chr6 (374-419)||(20744133-20744178)
chr6 (374-419)||(28951394-28951439)
chr6 (370-419)||(33930486-33930535)
chr6 (371-419)||(9677227-9677275)
chr6 (368-420)||(12459761-12459813)
chr6 (371-419)||(22414469-22414517)
chr6 (379-419)||(24269883-24269923)
[»] chr7 (32 HSPs)
chr7 (57-179)||(45145338-45145460)
chr7 (73-180)||(45152970-45153077)
chr7 (371-419)||(34369471-34369519)
chr7 (379-420)||(31885965-31886006)
chr7 (379-420)||(38139558-38139599)
chr7 (371-420)||(43539124-43539173)
chr7 (88-164)||(45152686-45152762)
chr7 (371-419)||(47589574-47589622)
chr7 (372-419)||(29794407-29794454)
chr7 (372-419)||(37516823-37516870)
chr7 (372-419)||(40752860-40752907)
chr7 (371-418)||(48980479-48980526)
chr7 (373-419)||(10244721-10244767)
chr7 (373-419)||(39801700-39801746)
chr7 (372-418)||(42043088-42043134)
chr7 (370-420)||(43498479-43498529)
chr7 (372-414)||(45051690-45051732)
chr7 (373-419)||(46207754-46207800)
chr7 (373-418)||(5526719-5526764)
chr7 (379-420)||(22327678-22327719)
chr7 (370-419)||(24991772-24991821)
chr7 (370-419)||(27462457-27462506)
chr7 (371-420)||(30397061-30397110)
chr7 (367-420)||(43346584-43346637)
chr7 (79-164)||(45142032-45142117)
chr7 (371-419)||(5579685-5579733)
chr7 (379-419)||(7670434-7670474)
chr7 (379-419)||(9522912-9522952)
chr7 (379-419)||(13955480-13955520)
chr7 (371-419)||(19416506-19416554)
chr7 (371-419)||(25149375-25149423)
chr7 (371-419)||(27993050-27993098)
[»] chr5 (39 HSPs)
chr5 (244-372)||(7125649-7125776)
chr5 (379-419)||(6234821-6234861)
chr5 (278-372)||(10023171-10023261)
chr5 (374-419)||(14188356-14188401)
chr5 (370-419)||(37932321-37932370)
chr5 (372-420)||(17239401-17239449)
chr5 (379-419)||(27903113-27903153)
chr5 (371-419)||(37791184-37791232)
chr5 (371-418)||(10199011-10199058)
chr5 (367-418)||(15725336-15725387)
chr5 (373-420)||(16188818-16188865)
chr5 (373-420)||(16188920-16188967)
chr5 (372-419)||(27721696-27721743)
chr5 (379-418)||(30488925-30488964)
chr5 (376-419)||(32675314-32675357)
chr5 (368-419)||(40056611-40056662)
chr5 (379-417)||(4573082-4573120)
chr5 (365-419)||(6488993-6489047)
chr5 (373-419)||(8410466-8410512)
chr5 (369-419)||(10531530-10531580)
chr5 (373-419)||(10704352-10704398)
chr5 (374-420)||(16193102-16193148)
chr5 (369-419)||(18331697-18331747)
chr5 (373-419)||(18589888-18589934)
chr5 (369-419)||(19248469-19248519)
chr5 (365-419)||(22522822-22522876)
chr5 (377-419)||(31602846-31602888)
chr5 (371-420)||(1512847-1512896)
chr5 (370-419)||(18489097-18489146)
chr5 (370-419)||(26034629-26034678)
chr5 (379-420)||(26409253-26409294)
chr5 (379-420)||(42515807-42515848)
chr5 (366-418)||(12265901-12265953)
chr5 (372-420)||(12909186-12909234)
chr5 (374-418)||(22619869-22619913)
chr5 (379-419)||(27086078-27086118)
chr5 (371-419)||(31708167-31708215)
chr5 (368-419)||(40541084-40541136)
chr5 (371-419)||(42505864-42505912)
[»] chr4 (34 HSPs)
chr4 (370-419)||(19479498-19479547)
chr4 (369-420)||(160699-160750)
chr4 (373-419)||(3936621-3936667)
chr4 (365-419)||(27179737-27179791)
chr4 (365-418)||(7282543-7282596)
chr4 (374-419)||(19854560-19854605)
chr4 (379-420)||(50380856-50380897)
chr4 (366-418)||(2580720-2580772)
chr4 (372-412)||(10401424-10401464)
chr4 (371-419)||(30051888-30051936)
chr4 (370-418)||(32430145-32430193)
chr4 (372-419)||(2186354-2186401)
chr4 (372-419)||(28435269-28435316)
chr4 (368-419)||(37463511-37463562)
chr4 (372-419)||(52270051-52270098)
chr4 (240-366)||(26015231-26015356)
chr4 (377-419)||(29681478-29681520)
chr4 (373-419)||(35287528-35287574)
chr4 (369-411)||(44724373-44724415)
chr4 (384-418)||(47015590-47015624)
chr4 (365-419)||(50362160-50362214)
chr4 (373-418)||(9913893-9913938)
chr4 (366-415)||(16996449-16996498)
chr4 (378-419)||(20383487-20383528)
chr4 (379-420)||(32923250-32923291)
chr4 (379-420)||(36569173-36569214)
chr4 (374-419)||(37193244-37193289)
chr4 (379-420)||(50937568-50937609)
chr4 (379-420)||(51465337-51465378)
chr4 (371-419)||(6087739-6087787)
chr4 (371-419)||(7230272-7230320)
chr4 (380-420)||(8415515-8415555)
chr4 (379-419)||(40070989-40071029)
chr4 (379-419)||(44221447-44221487)
[»] chr2 (29 HSPs)
chr2 (371-420)||(4238751-4238800)
chr2 (360-420)||(17736774-17736834)
chr2 (379-419)||(22520217-22520257)
chr2 (372-415)||(33117430-33117473)
chr2 (374-420)||(15637593-15637639)
chr2 (88-173)||(38256505-38256590)
chr2 (370-418)||(9517031-9517079)
chr2 (372-420)||(27889282-27889330)
chr2 (373-419)||(7201501-7201547)
chr2 (373-419)||(9383230-9383276)
chr2 (381-419)||(9537027-9537065)
chr2 (369-419)||(32204534-32204584)
chr2 (377-419)||(38443539-38443581)
chr2 (377-419)||(41311982-41312024)
chr2 (379-420)||(2429016-2429057)
chr2 (370-419)||(4122034-4122083)
chr2 (370-419)||(8091179-8091228)
chr2 (379-420)||(15770790-15770831)
chr2 (374-419)||(40546311-40546356)
chr2 (382-419)||(41668658-41668695)
chr2 (371-420)||(41682407-41682456)
chr2 (339-372)||(43277042-43277075)
chr2 (372-420)||(346144-346192)
chr2 (375-419)||(2687395-2687439)
chr2 (363-419)||(20200690-20200745)
chr2 (372-420)||(28644518-28644566)
chr2 (372-420)||(35404575-35404623)
chr2 (379-419)||(42714439-42714479)
chr2 (373-417)||(44526122-44526166)
[»] chr1 (31 HSPs)
chr1 (371-418)||(35308177-35308224)
chr1 (371-419)||(1794588-1794636)
chr1 (365-419)||(8384237-8384291)
chr1 (373-419)||(25532967-25533013)
chr1 (373-419)||(48681954-48682000)
chr1 (371-419)||(28832192-28832240)
chr1 (367-419)||(30795689-30795741)
chr1 (371-419)||(32944728-32944776)
chr1 (369-413)||(39452450-39452494)
chr1 (372-419)||(42045393-42045440)
chr1 (379-418)||(44340883-44340922)
chr1 (370-420)||(5320871-5320920)
chr1 (377-419)||(8253737-8253779)
chr1 (379-413)||(15892797-15892831)
chr1 (369-415)||(24752673-24752719)
chr1 (373-419)||(25086477-25086523)
chr1 (373-419)||(27449466-27449512)
chr1 (365-419)||(29935969-29936023)
chr1 (373-419)||(48100716-48100762)
chr1 (369-419)||(52441532-52441582)
chr1 (379-420)||(9413798-9413839)
chr1 (367-420)||(15602197-15602250)
chr1 (369-418)||(19316167-19316216)
chr1 (373-418)||(27853349-27853394)
chr1 (370-419)||(28460240-28460289)
chr1 (379-420)||(30003201-30003242)
chr1 (370-419)||(37045167-37045216)
chr1 (374-418)||(3157739-3157783)
chr1 (371-419)||(36467046-36467094)
chr1 (379-419)||(45140027-45140067)
chr1 (379-419)||(45190290-45190330)
[»] chr3 (32 HSPs)
chr3 (303-380)||(43903512-43903590)
chr3 (370-419)||(53996290-53996339)
chr3 (379-418)||(7938724-7938763)
chr3 (372-419)||(22722395-22722442)
chr3 (373-415)||(15690948-15690990)
chr3 (373-418)||(2496549-2496594)
chr3 (354-419)||(13800642-13800707)
chr3 (371-420)||(19126697-19126746)
chr3 (371-419)||(2753725-2753773)
chr3 (368-420)||(32632310-32632362)
chr3 (376-420)||(42269295-42269339)
chr3 (379-419)||(43490438-43490478)
chr3 (371-419)||(52172808-52172856)
chr3 (364-419)||(7868707-7868762)
chr3 (372-419)||(10498716-10498763)
chr3 (369-419)||(21331438-21331488)
chr3 (373-419)||(38130980-38131026)
chr3 (379-417)||(41493903-41493941)
chr3 (374-415)||(5030200-5030241)
chr3 (374-419)||(8139710-8139755)
chr3 (370-419)||(19468442-19468491)
chr3 (379-420)||(29334578-29334619)
chr3 (373-418)||(38559918-38559963)
chr3 (379-419)||(529180-529220)
chr3 (379-419)||(5941315-5941355)
chr3 (379-419)||(8942017-8942057)
chr3 (371-419)||(20296286-20296334)
chr3 (371-419)||(25441521-25441569)
chr3 (367-419)||(25917606-25917658)
chr3 (372-420)||(33633338-33633386)
chr3 (371-419)||(39083854-39083902)
chr3 (372-420)||(54020669-54020717)
[»] chr8 (27 HSPs)
chr8 (365-419)||(20469332-20469386)
chr8 (373-418)||(8982561-8982606)
chr8 (371-419)||(7996932-7996980)
chr8 (368-419)||(8910002-8910053)
chr8 (373-420)||(21557427-21557474)
chr8 (371-418)||(33445562-33445609)
chr8 (373-419)||(12910827-12910873)
chr8 (373-415)||(15225799-15225841)
chr8 (377-419)||(30427729-30427771)
chr8 (371-420)||(6235571-6235620)
chr8 (280-366)||(13948817-13948899)
chr8 (379-420)||(15188899-15188940)
chr8 (373-418)||(18148824-18148869)
chr8 (366-419)||(23816777-23816830)
chr8 (370-419)||(23852902-23852951)
chr8 (370-419)||(32051553-32051602)
chr8 (379-420)||(32115426-32115467)
chr8 (365-418)||(33620884-33620937)
chr8 (373-418)||(37117546-37117591)
chr8 (379-420)||(41625194-41625235)
chr8 (372-420)||(574377-574425)
chr8 (367-419)||(2060633-2060685)
chr8 (379-415)||(2958425-2958461)
chr8 (379-419)||(10601763-10601803)
chr8 (379-419)||(32878661-32878701)
chr8 (371-419)||(33451370-33451418)
chr8 (371-419)||(40795369-40795417)
[»] scaffold0006 (1 HSPs)
scaffold0006 (379-419)||(223698-223738)
[»] scaffold0098 (1 HSPs)
scaffold0098 (373-418)||(5419-5464)
[»] scaffold0012 (1 HSPs)
scaffold0012 (371-420)||(118811-118860)
[»] scaffold0458 (1 HSPs)
scaffold0458 (369-413)||(11179-11223)
[»] scaffold0118 (1 HSPs)
scaffold0118 (379-419)||(39998-40038)
[»] scaffold0057 (1 HSPs)
scaffold0057 (380-420)||(35179-35219)
[»] scaffold0025 (1 HSPs)
scaffold0025 (371-419)||(64210-64258)
[»] scaffold0011 (1 HSPs)
scaffold0011 (371-419)||(185255-185303)


Alignment Details
Target: chr6 (Bit Score: 355; Significance: 0; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 16 - 419
Target Start/End: Complemental strand, 12700841 - 12700442
Alignment:
Q  16 attgagcctgaagttgtggaagctagcatatgttctaagggtaatctgaagggtgttgtgttgaaggctaagcatattgcagaagcggctttgtttcttg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12700841 attgagcctgaagttgtggaagctagcatatgttctaagggtaatctgaagggtgttgtgttgaaggctaagcatattgcagaagcagctttgtttcttg 12700742  T
Q  116 cttctgatgaagctgtttacattagtggtcataatttggtggttgatggtggtttctctgtggttcataatatagaacgaatggtttaaacttttcgatt 215  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  12700741 cttctgatgaagctgtttacattagtggtcataatttggtagttgatggtggtttctctgtggttcataatatagaacaaacggtttaaacttttcgatt 12700642  T
Q  216 gtgtcctttcaattgcttagacagttggacgctggttagatgtttttacttcgcttcttcttggtgaagtgctgtatttgaacttaatttgttgcccttc 315  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    |||||||||||||    
T  12700641 gtgtcctttcaattgcttagacagttggacactggttagatgtttttacttcgcttcttcttggtgaagtgttgtatttgaac----tttgttgcccttc 12700546  T
Q  316 cttggcacaccatgtgctgagaagagcatcttttgtcgtttaatataagttttatttgtccttgtgagcttagttcagttagtatgaacaatgcataata 415  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12700545 cttggcacaccatatgctgagaagagcatcttttgtcgtttaatataagttttatttgtccttgtgagcttagttcagttggtatgaacaatgcataata 12700446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 365 - 419
Target Start/End: Original strand, 9111033 - 9111087
Alignment:
Q  365 ttttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  9111033 ttttaattgtcctcgtgagcttagttcagttggtatgaacaatgcataatatatg 9111087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 12333637 - 12333589
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| |||||||||| |||||||||||| ||||||||||| |||||    
T  12333637 ttgtcctcgtgagcttagctcagttagtatggacaatgcataaaatatg 12333589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 33938740 - 33938700
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  33938740 gtgagcttagctcagttggtatgaacaatgcataatatatg 33938700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 34701139 - 34701187
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| |||| |||||||||||| ||| |||||||||||||||||||    
T  34701139 ttgtcctcgtgaacttagttcagttggtaggaacaatgcataatatatg 34701187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 655817 - 655770
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||||||| |||||| ||||  |||||||||||||||||    
T  655817 tgtccttgtgagcttagctcagttggtatcgacaatgcataatatatg 655770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 419
Target Start/End: Complemental strand, 3923213 - 3923170
Alignment:
Q  376 cttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||| ||||||| ||||||||||||||| |||||||    
T  3923213 cttgtgagcttaattcagttggtatgaacaatgcattatatatg 3923170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 29335643 - 29335596
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||| |||||||||  ||||||||||| ||||||||||||||||||    
T  29335643 tgtcctcgtgagcttaactcagttagtataaacaatgcataatatatg 29335596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Original strand, 32053781 - 32053828
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||| |||||||||| |||||| ||||| |||||||||||||||||    
T  32053781 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 32053828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 419
Target Start/End: Original strand, 20744133 - 20744178
Alignment:
Q  374 tccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||| |||||||||| |||||| ||||| |||||||||||||||||    
T  20744133 tcctcgtgagcttagctcagttggtatggacaatgcataatatatg 20744178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 419
Target Start/End: Original strand, 28951394 - 28951439
Alignment:
Q  374 tccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||| |||||||||  |||||| |||||||||||||||||||||||    
T  28951394 tcctcgtgagcttaactcagttggtatgaacaatgcataatatatg 28951439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 33930486 - 33930535
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||  |||||||||| |||||||||| ||| |||||||||||||||    
T  33930486 tttgtccccgtgagcttagctcagttagtaggaaaaatgcataatatatg 33930535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 9677227 - 9677275
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| |||||||||| |||||| || || |||||||||||||||||    
T  9677227 ttgtcctcgtgagcttagctcagttggtttggacaatgcataatatatg 9677275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 420
Target Start/End: Complemental strand, 12459813 - 12459761
Alignment:
Q  368 tatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||| ||||||||||||||  | |||| ||||||| ||||||||||||||||    
T  12459813 tatttatccttgtgagcttatcttagtttgtatgaataatgcataatatatgt 12459761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 22414517 - 22414469
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||| |||| |||||||||| | | |||||||||||||||    
T  22414517 ttgtccttgtgagtttagctcagttagtaaggataatgcataatatatg 22414469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 24269883 - 24269923
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||| |||||||||||| ||||||||||| |||||    
T  24269883 gtgagcttagctcagttagtatggacaatgcataaaatatg 24269923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 4e-39; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 57 - 179
Target Start/End: Original strand, 45145338 - 45145460
Alignment:
Q  57 taatctgaagggtgttgtgttgaaggctaagcatattgcagaagcggctttgtttcttgcttctgatgaagctgtttacattagtggtcataatttggtg 156  Q
    |||| |||||||| ||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||| || ||||||||||| |||||     
T  45145338 taatttgaagggtattgtgttgaaggcaaagcatgttgcagaagcagctttgtttcttgcttctgatgaagctgtttatatcagtggtcataacttggtt 45145437  T
Q  157 gttgatggtggtttctctgtggt 179  Q
    ||||||||||||||||| |||||    
T  45145438 gttgatggtggtttctcggtggt 45145460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 180
Target Start/End: Original strand, 45152970 - 45153077
Alignment:
Q  73 gtgttgaaggctaagcatattgcagaagcggctttgtttcttgcttctgatgaagctgtttacattagtggtcataatttggtggttgatggtggtttct 172  Q
    ||||||||| ||| |||||||||| |||| ||||||||||||| ||||||||||||| ||||||| |||||| ||||||||||  ||||| |||| || |    
T  45152970 gtgttgaagtctaggcatattgcataagcagctttgtttcttgattctgatgaagctatttacatcagtggttataatttggttcttgattgtggcttat 45153069  T
Q  173 ctgtggtt 180  Q
    || |||||    
T  45153070 ctatggtt 45153077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 34369471 - 34369519
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| |||||| |||||||||||||||| |||||||||||||||||    
T  34369471 ttgtcctcgtgagcatagttcagttagtatggacaatgcataatatatg 34369519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 379 - 420
Target Start/End: Complemental strand, 31886006 - 31885965
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||| ||||||||||| ||||||||||||||||||||||||    
T  31886006 gtgagtttagttcagttggtatgaacaatgcataatatatgt 31885965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 38139558 - 38139599
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  38139558 gtgagcttagttcagttagtatgaacaatgcatgagatatgt 38139599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 420
Target Start/End: Complemental strand, 43539173 - 43539124
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||||||||||||| ||||||  || ||||||||||||||||||||    
T  43539173 ttgtccttgtgagcttagctcagttgataggaacaatgcataatatatgt 43539124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 45152686 - 45152762
Alignment:
Q  88 catattgcagaagcggctttgtttcttgcttctgatgaagctgtttacattagtggtcataatttggtggttgatgg 164  Q
    |||||||||||||| ||| ||||||||||||| |||||| | | ||| |||||||| || || |||||||| |||||    
T  45152686 catattgcagaagctgctatgtttcttgcttccgatgaatcggcttatattagtggacaaaacttggtggtcgatgg 45152762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 47589622 - 47589574
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| |||||||||| |||||| ||||||||||||||||| |||||    
T  47589622 ttgtcctcgtgagcttagctcagttggtatgaacaatgcataaaatatg 47589574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Original strand, 29794407 - 29794454
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||| || ||||||||||||| ||||||||||||| ||||||||||    
T  29794407 tgtcctcgttagcttagttcagtcagtatgaacaatgtataatatatg 29794454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 37516870 - 37516823
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||||||  |||||||||||| ||||||||||| |||||    
T  37516870 tgtccttgtgagcttaactcagttagtatggacaatgcataacatatg 37516823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 40752907 - 40752860
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||| |||||||||| |||||||||||| ||||| |||||||||||    
T  40752907 tgtcctcgtgagcttagctcagttagtatggacaatacataatatatg 40752860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 418
Target Start/End: Original strand, 48980479 - 48980526
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||||| |||||||||| |||||| ||||| ||||||||||||||||    
T  48980479 ttgtcctcgtgagcttagctcagttggtatggacaatgcataatatat 48980526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 10244721 - 10244767
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| |||||||||| |||||| ||||| |||||||||||||||||    
T  10244721 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 10244767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 39801700 - 39801746
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| |||||||||| |||||| ||||| |||||||||||||||||    
T  39801700 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 39801746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 418
Target Start/End: Complemental strand, 42043134 - 42043088
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    |||| |||||||||||| |||||| ||||| ||||||||||||||||    
T  42043134 tgtctttgtgagcttagctcagttggtatggacaatgcataatatat 42043088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 43498479 - 43498529
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||| |||||||||| |||  ||||||| ||||||||||||||||||    
T  43498479 tttgtcctcgtgagcttagctcaactagtatggacaatgcataatatatgt 43498529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 45051690 - 45051732
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataat 414  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||    
T  45051690 tgtccttctgagcttagctcagttggtatgaacaatgcataat 45051732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 46207754 - 46207800
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| |||||||||| |||||| ||||||||||||||||| |||||    
T  46207754 gtcctcgtgagcttagctcagttggtatgaacaatgcataaaatatg 46207800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 418
Target Start/End: Original strand, 5526719 - 5526764
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||| |||||||||| |||||| ||||| ||||||||||||||||    
T  5526719 gtcctcgtgagcttagctcagttggtatggacaatgcataatatat 5526764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 22327678 - 22327719
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||||| |||||| ||| ||||||||||||||||||||    
T  22327678 gtgagcttagctcagttcgtaagaacaatgcataatatatgt 22327719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 24991772 - 24991821
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| ||||||||||| |||||| ||| | |||||||||||||||||    
T  24991772 tttgtccctgtgagcttagctcagttggtaaggacaatgcataatatatg 24991821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 27462506 - 27462457
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||| |||||| ||| |||||| ||||| |||||||||||||||||    
T  27462506 tttgtcctcgtgagcatagctcagttggtatggacaatgcataatatatg 27462457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 420
Target Start/End: Original strand, 30397061 - 30397110
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||||||||||||| ||| || ||||| ||||||||||| ||||||    
T  30397061 ttgtccttgtgagcttaggtcatttggtatggacaatgcataaaatatgt 30397110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 420
Target Start/End: Complemental strand, 43346637 - 43346584
Alignment:
Q  367 ttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||| ||| ||||||| ||||| |||||| ||||| ||||||||||||||||||    
T  43346637 ttatctgttcttgtgaacttagctcagttggtatggacaatgcataatatatgt 43346584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 45142032 - 45142117
Alignment:
Q  79 aaggctaagcatattgcagaagcggctttgtttcttgcttctgatgaagctgtttacattagtggtcataatttggtggttgatgg 164  Q
    ||||||| ||||||||||||||| ||| | |||||||| || || ||| | | ||| |||||||| || ||||||||||| |||||    
T  45142032 aaggctacgcatattgcagaagctgctctctttcttgcatcggaagaatcggcttatattagtggacacaatttggtggtcgatgg 45142117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 5579685 - 5579733
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||||||||| |||||| ||| | ||| |||||||||||||    
T  5579685 ttgtccttgtgagcttagctcagttggtagggacagtgcataatatatg 5579733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 7670434 - 7670474
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||| |||||| || ||||||||||||||||||||    
T  7670434 gtgagcttagctcagttggtttgaacaatgcataatatatg 7670474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 9522912 - 9522952
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||| ||||| |||||| |||||||||||||||||||||||    
T  9522912 gtgaacttagctcagttggtatgaacaatgcataatatatg 9522952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 13955480 - 13955520
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||| |||||| ||||||||||||||||| |||||    
T  13955480 gtgagcttagctcagttggtatgaacaatgcataaaatatg 13955520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 19416506 - 19416554
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| |||||||||| |||||| ||||| ||||||||||| |||||    
T  19416506 ttgtcctcgtgagcttagctcagttggtatggacaatgcataaaatatg 19416554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 25149375 - 25149423
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||  ||||| |||||||||||| ||| |||||||||||||||||    
T  25149375 ttgtcctcttgagcatagttcagttagcatggacaatgcataatatatg 25149423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 27993098 - 27993050
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| |||||||||  |||||| ||||||||||||||||| |||||    
T  27993098 ttgtcctcgtgagcttaactcagttggtatgaacaatgcataaaatatg 27993050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 372
Target Start/End: Complemental strand, 7125776 - 7125649
Alignment:
Q  244 acgctggttagatgtttttacttcgcttcttctt---ggtgaagtgctgtatttgaacttaatttgttgcccttccttggcacaccatgtgctgagaaga 340  Q
    ||||||||||||||||||||||| ||||||||||   ||||||||| |||||||||||||    || |||  |||||||||||||| |||||||||| ||    
T  7125776 acgctggttagatgtttttactttgcttcttctttatggtgaagtgttgtatttgaactt----tgatgcttttccttggcacaccttgtgctgagagga 7125681  T
Q  341 gcatcttttgtcgtttaatataagttttattt 372  Q
    ||||||||| ||||||||||||||||| ||||    
T  7125680 gcatcttttatcgtttaatataagtttcattt 7125649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 6234861 - 6234821
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  6234861 gtgagcttagctcagttagtatgaacaatgcataatatatg 6234821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 278 - 372
Target Start/End: Original strand, 10023171 - 10023261
Alignment:
Q  278 ggtgaagtgctgtatttgaacttaatttgttgcccttccttggcacaccatgtgctgagaagagcatcttttgtcgtttaatataagttttattt 372  Q
    ||||||||| |||||||||||||    |||| | ||| |||| |||||| |  ||||||| ||| || |||||||||||||||||||||||||||    
T  10023171 ggtgaagtgttgtatttgaactt----tgtttctcttacttgacacaccttaggctgagaggagtatattttgtcgtttaatataagttttattt 10023261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 419
Target Start/End: Complemental strand, 14188401 - 14188356
Alignment:
Q  374 tccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||    
T  14188401 tccttgtgagcttagttcagttggtatggacaatccataatatatg 14188356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 37932321 - 37932370
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||| |||||||||| |||||| ||||| |||||||||||||||||    
T  37932321 tttgtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 37932370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 420
Target Start/End: Complemental strand, 17239449 - 17239401
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||||||||||| | |||||| ||||| ||||||||||||||||||    
T  17239449 tgtccttgtgagctttgctcagttggtatggacaatgcataatatatgt 17239401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 27903113 - 27903153
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  27903113 gtgagtttagttcagttggtatgaacaatgcataatatatg 27903153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 37791232 - 37791184
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||||||||||||||| |||  ||||| ||||||||||||    
T  37791232 ttgtccttgtgagcttagttcagttggtagaaacaacgcataatatatg 37791184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 418
Target Start/End: Original strand, 10199011 - 10199058
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||||| |||||||||| |||||| ||||| ||||||||||||||||    
T  10199011 ttgtcctcgtgagcttagctcagttggtatggacaatgcataatatat 10199058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 418
Target Start/End: Complemental strand, 15725387 - 15725336
Alignment:
Q  367 ttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||||||| | |||||||||  ||||||||||||||||||| |||||||||    
T  15725387 ttatttgtcttcgtgagcttaactcagttagtatgaacaatgtataatatat 15725336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 420
Target Start/End: Original strand, 16188818 - 16188865
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||||| ||||| |||||| ||||| ||||||||||||||||||    
T  16188818 gtccttgtgaacttagctcagttggtatggacaatgcataatatatgt 16188865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 420
Target Start/End: Original strand, 16188920 - 16188967
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||||| ||||| |||||| ||||| ||||||||||||||||||    
T  16188920 gtccttgtgaacttagctcagttggtatggacaatgcataatatatgt 16188967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 27721743 - 27721696
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||| |||||||||| |||||| ||| |||||||||||||||||||    
T  27721743 tgtcctcgtgagcttagctcagttggtaggaacaatgcataatatatg 27721696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Original strand, 30488925 - 30488964
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  30488925 gtgagcttagttcagttgatatgaacaatgcataatatat 30488964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 419
Target Start/End: Complemental strand, 32675357 - 32675314
Alignment:
Q  376 cttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||||||||||| | | |||||||||||||||||||    
T  32675357 cttgtgagcttagttcagttggcaagaacaatgcataatatatg 32675314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 419
Target Start/End: Complemental strand, 40056662 - 40056611
Alignment:
Q  368 tatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||||||||||  |||||| ||| | |||||||||||||||||    
T  40056662 tatttgtccttgtgagcttaactcagttggtaaggacaatgcataatatatg 40056611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 417
Target Start/End: Complemental strand, 4573120 - 4573082
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatata 417  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  4573120 gtgagcttagttcagttggtatggacaatgcataatata 4573082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 419
Target Start/End: Original strand, 6488993 - 6489047
Alignment:
Q  365 ttttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||| |||||| |||||||||| |||||| ||| | |||||||||||||||||    
T  6488993 ttttatgtgtcctcgtgagcttagctcagttggtagggacaatgcataatatatg 6489047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 8410512 - 8410466
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| |||||||||| ||||||||| |||||||||||||| |||||    
T  8410512 gtcctcgtgagcttagctcagttagtgtgaacaatgcataaaatatg 8410466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 10531530 - 10531580
Alignment:
Q  369 atttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||| |||||||||||| ||||  |||| |||||||||||||||||    
T  10531530 atttgtcctcgtgagcttagtttagttgctatggacaatgcataatatatg 10531580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 10704398 - 10704352
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||||||| |||||| ||||| ||||||||||| |||||    
T  10704398 gtccttgtgagcttagctcagttggtatggacaatgcataaaatatg 10704352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 420
Target Start/End: Original strand, 16193102 - 16193148
Alignment:
Q  374 tccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||| ||||| ||||||||||| ||||||||||||||||| ||||||    
T  16193102 tcctcgtgagtttagttcagttggtatgaacaatgcataaaatatgt 16193148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 18331697 - 18331747
Alignment:
Q  369 atttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||||||||||| ||| || ||||| ||||||||||| |||||    
T  18331697 atttgtccttgtgagcttagctcacttggtatggacaatgcataaaatatg 18331747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 18589934 - 18589888
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| |||||||||  |||||| |||||||||||||||||||||||    
T  18589934 gtcctcgtgagcttaactcagttggtatgaacaatgcataatatatg 18589888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 19248469 - 19248519
Alignment:
Q  369 atttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||| |||||||||| |||||| ||||  |||||||||||||||||    
T  19248469 atttgtcctcgtgagcttagctcagttggtatagacaatgcataatatatg 19248519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 419
Target Start/End: Complemental strand, 22522876 - 22522822
Alignment:
Q  365 ttttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||| |||||||| |||||||||| || ||| ||||| |||||||||||||||||    
T  22522876 ttttttttgtcctcgtgagcttagctcggttggtatggacaatgcataatatatg 22522822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 419
Target Start/End: Complemental strand, 31602888 - 31602846
Alignment:
Q  377 ttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||| ||||| |||||| |||||||||||||||||||||||    
T  31602888 ttgtgaccttagctcagttggtatgaacaatgcataatatatg 31602846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 420
Target Start/End: Original strand, 1512847 - 1512896
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||| |||||||||  |||||||||| | ||||||||||||||||||    
T  1512847 ttgtcctcgtgagcttaactcagttagtagggacaatgcataatatatgt 1512896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 18489146 - 18489097
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||||| |||| |||||| ||||  |||||||||||||||||    
T  18489146 tttgtccttgtgagtttagctcagttggtatagacaatgcataatatatg 18489097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 26034678 - 26034629
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| || |||||||||  |||||| |||||||||||||||||||||||    
T  26034678 tttgttctcgtgagcttaactcagttggtatgaacaatgcataatatatg 26034629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 26409253 - 26409294
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||||| |||||| ||||| ||||||||||||||||||    
T  26409253 gtgagcttagctcagttggtatggacaatgcataatatatgt 26409294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 42515807 - 42515848
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||    
T  42515807 gtgagcttaattcagttggtatggacaatgcataatatatgt 42515848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 12265901 - 12265953
Alignment:
Q  366 tttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||| ||| ||| |||||||||||||||| ||||| ||||||||||| ||||    
T  12265901 tttatatgttcttctgagcttagttcagttggtatggacaatgcataaaatat 12265953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 420
Target Start/End: Complemental strand, 12909234 - 12909186
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||| ||||  |||| |||||| ||||||||||||||||||||||||    
T  12909234 tgtcctcgtgaatttagctcagttggtatgaacaatgcataatatatgt 12909186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 418
Target Start/End: Original strand, 22619869 - 22619913
Alignment:
Q  374 tccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    |||| |||||||||| |||||| ||||||||||||||||| ||||    
T  22619869 tcctcgtgagcttagctcagttggtatgaacaatgcataaaatat 22619913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 27086078 - 27086118
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||||||| ||| |||||||| ||||||||||    
T  27086078 gtgagcttagttcagtttgtaagaacaatgtataatatatg 27086118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 31708215 - 31708167
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| |||||| | | |||||| |||||||||||||||||||||||    
T  31708215 ttgtcctcgtgagcattgctcagttggtatgaacaatgcataatatatg 31708167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 419
Target Start/End: Original strand, 40541084 - 40541136
Alignment:
Q  368 tatttgtccttgtgagcttagttcagttagt-atgaacaatgcataatatatg 419  Q
    ||||| ||||||||||||||| |||||| || | |||||||||||||||||||    
T  40541084 tatttttccttgtgagcttagctcagttggtaaggaacaatgcataatatatg 40541136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 42505864 - 42505912
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| || ||||||| |||||| ||||| |||||||||||||||||    
T  42505864 ttgtcctcgtaagcttagctcagttggtatggacaatgcataatatatg 42505912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 19479547 - 19479498
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  19479547 tttgtccttgtgagcttagctcagttaatatgaacaatgcataatatatg 19479498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 369 - 420
Target Start/End: Original strand, 160699 - 160750
Alignment:
Q  369 atttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||||| ||||||||||||||||  |||| |||||||||||||||||||    
T  160699 atttgtcctcgtgagcttagttcagtaggtattaacaatgcataatatatgt 160750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 3936621 - 3936667
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||| ||||||||||| |||||| |||||||||||||||||||||||    
T  3936621 gtccctgtgagcttagctcagttggtatgaacaatgcataatatatg 3936667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 419
Target Start/End: Complemental strand, 27179791 - 27179737
Alignment:
Q  365 ttttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||  || ||||||||||||||||||||||||| |||| ||||||||||    
T  27179791 ttttatttgctctcgtgagcttagttcagttagtatgaataatgtataatatatg 27179737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 7282543 - 7282596
Alignment:
Q  365 ttttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    |||| ||||| ||||||| ||||| |||||| ||||||||||||||||||||||    
T  7282543 ttttctttgttcttgtgaacttagctcagttggtatgaacaatgcataatatat 7282596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 419
Target Start/End: Original strand, 19854560 - 19854605
Alignment:
Q  374 tccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||    
T  19854560 tccttgtgagcttagctcagttggtatggacaatgcataatatatg 19854605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 379 - 420
Target Start/End: Complemental strand, 50380897 - 50380856
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  50380897 gtgagcttaattcagttggtatgaacaatgcataatatatgt 50380856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 2580720 - 2580772
Alignment:
Q  366 tttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    |||||||||| |||||||||||| |||||| ||||| ||||||| ||||||||    
T  2580720 tttatttgtctttgtgagcttagctcagttggtatggacaatgcgtaatatat 2580772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 412
Target Start/End: Complemental strand, 10401464 - 10401424
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcata 412  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  10401464 tgtcctcgtgagcttagttcagttggtatgaacaatgcata 10401424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 30051936 - 30051888
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| |||||||||||||||||  |||| |||||||||||||||||    
T  30051936 ttgtcctcgtgagcttagttcagttgttatggacaatgcataatatatg 30051888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 32430193 - 32430145
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    |||||||| |||||||||  |||||||||||||||||||||||| ||||    
T  32430193 tttgtcctcgtgagcttaactcagttagtatgaacaatgcataaaatat 32430145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 2186401 - 2186354
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||| |||||||||| |||||| ||||| |||||||||||||||||    
T  2186401 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 2186354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 28435316 - 28435269
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||| |||| |||||| ||||| |||||||||||||||||    
T  28435316 tgtccttgtgagtttagctcagttggtatggacaatgcataatatatg 28435269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 419
Target Start/End: Original strand, 37463511 - 37463562
Alignment:
Q  368 tatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||| | |||||||||| || ||| |||||||||||||||||||||||    
T  37463511 tatttgtcatcgtgagcttagctcggttggtatgaacaatgcataatatatg 37463562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 52270098 - 52270051
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||| |||||||||| |||||| ||||| |||||||||||||||||    
T  52270098 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 52270051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 366
Target Start/End: Original strand, 26015231 - 26015356
Alignment:
Q  240 ttggacgctggttagatgtttttacttcg---cttcttcttggtgaagtgctgtatttgaacttaatttgttgcccttccttggcacaccatgtgctgag 336  Q
    ||||||| ||||||||||||||||||| |    ||||| |||||||| || ||||||| |||    ||||||||  || ||| ||||||| | |||| ||    
T  26015231 ttggacgttggttagatgtttttactttgtttgttcttattggtgaaatgttgtatttaaac----tttgttgctttttcttagcacaccttatgcttag 26015326  T
Q  337 aagagcatcttttgtcgtttaatataagtt 366  Q
    | ||| |||||||||||| |||||||||||    
T  26015327 aggagtatcttttgtcgtataatataagtt 26015356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 419
Target Start/End: Complemental strand, 29681520 - 29681478
Alignment:
Q  377 ttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||    
T  29681520 ttgtgagcttagttcagttggtatggacaatgcataaaatatg 29681478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 35287574 - 35287528
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| |||||||||| |||||| ||||||||||||||||| |||||    
T  35287574 gtcctcgtgagcttagctcagttggtatgaacaatgcataaaatatg 35287528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 411
Target Start/End: Original strand, 44724373 - 44724415
Alignment:
Q  369 atttgtccttgtgagcttagttcagttagtatgaacaatgcat 411  Q
    |||||||||||||||||||  |||||| |||||||||||||||    
T  44724373 atttgtccttgtgagcttaactcagttggtatgaacaatgcat 44724415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 418
Target Start/End: Complemental strand, 47015624 - 47015590
Alignment:
Q  384 cttagttcagttagtatgaacaatgcataatatat 418  Q
    |||||||||||||||||| ||||||||||||||||    
T  47015624 cttagttcagttagtatggacaatgcataatatat 47015590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 419
Target Start/End: Complemental strand, 50362214 - 50362160
Alignment:
Q  365 ttttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||| |||||| |||||||||| |||||| ||| | |||||||||||||||||    
T  50362214 ttttatatgtcctcgtgagcttagctcagttggtagggacaatgcataatatatg 50362160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 418
Target Start/End: Original strand, 9913893 - 9913938
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||| |||||||||| |||||| ||||||||||||||||| ||||    
T  9913893 gtcctcgtgagcttagctcagttggtatgaacaatgcataaaatat 9913938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 415
Target Start/End: Original strand, 16996449 - 16996498
Alignment:
Q  366 tttatttgtccttgtgagcttagttcagttagtatgaacaatgcataata 415  Q
    |||||||||||  |||||||||| |||||| ||| |||||||||||||||    
T  16996449 tttatttgtccccgtgagcttagctcagttggtaagaacaatgcataata 16996498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 20383487 - 20383528
Alignment:
Q  378 tgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||| |||||| ||||| |||||||||||||||||    
T  20383487 tgtgagcttagctcagttggtatggacaatgcataatatatg 20383528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Complemental strand, 32923291 - 32923250
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||||  |||||| ||||||||||||||||||||||||    
T  32923291 gtgagcttaactcagttggtatgaacaatgcataatatatgt 32923250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 36569173 - 36569214
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||||| ||| |||||||||| ||||||||||||||||    
T  36569173 gtgagcttagctcaattagtatgaaaaatgcataatatatgt 36569214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 419
Target Start/End: Original strand, 37193244 - 37193289
Alignment:
Q  374 tccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||| |||||||||| |||||||||||| |||||| ||||||||||    
T  37193244 tcctcgtgagcttagctcagttagtatggacaatgtataatatatg 37193289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Complemental strand, 50937609 - 50937568
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||||||||||||| ||| |||||| |||||||||||||    
T  50937609 gtgagcttagttcagttggtaagaacaaagcataatatatgt 50937568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 51465337 - 51465378
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||    
T  51465337 gtgagcttaattcagttggtatggacaatgcataatatatgt 51465378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 6087739 - 6087787
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||||||||| |||||| ||||  | |||||||||||||||    
T  6087739 ttgtccttgtgagcttagctcagttggtatagataatgcataatatatg 6087787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 7230272 - 7230320
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| |||||||||| |||||| ||| | |||||||||||||||||    
T  7230272 ttgtcctcgtgagcttagctcagttggtaaggacaatgcataatatatg 7230320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 420
Target Start/End: Complemental strand, 8415555 - 8415515
Alignment:
Q  380 tgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||| ||||||| ||||| ||||||||||||||||||    
T  8415555 tgagcttaattcagttggtatggacaatgcataatatatgt 8415515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 40071029 - 40070989
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||  |||||| |||||||||||||||||||||||    
T  40071029 gtgagcttaactcagttggtatgaacaatgcataatatatg 40070989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 44221447 - 44221487
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||| ||||||| ||||| |||||||||||||||||    
T  44221447 gtgagcttaattcagttggtatggacaatgcataatatatg 44221487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 420
Target Start/End: Original strand, 4238751 - 4238800
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  4238751 ttgtccttgtgagcttagctcagttagtatggacaatgcataatatatgt 4238800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 420
Target Start/End: Original strand, 17736774 - 17736834
Alignment:
Q  360 ataagttttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||||| | |||||| |||||||||| |||||| ||||||||||||||||| ||||||    
T  17736774 ataagttttttatgtcctcgtgagcttagctcagttggtatgaacaatgcataaaatatgt 17736834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 22520217 - 22520257
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  22520217 gtgagcttagttcagttagtaagaacaatgcataatatatg 22520257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 415
Target Start/End: Complemental strand, 33117473 - 33117430
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataata 415  Q
    ||||||||||||||||| |||||||||||||| |||||||||||    
T  33117473 tgtccttgtgagcttagctcagttagtatgaataatgcataata 33117430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 420
Target Start/End: Original strand, 15637593 - 15637639
Alignment:
Q  374 tccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  15637593 tccttgtgagcttagctcagttaatatgaacaatgtataatatatgt 15637639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 38256505 - 38256590
Alignment:
Q  88 catattgcagaagcggctttgtttcttgcttctgatgaagctgtttacattagtggtcataatttggtggttgatggtggtttctc 173  Q
    |||||||||||  | |||||||||||||| ||||||||| ||| ||| |||||||| || || ||||| |||||||| || |||||    
T  38256505 catattgcagagactgctttgtttcttgcatctgatgaatctgcttatattagtggacacaacttggtcgttgatggaggcttctc 38256590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 9517079 - 9517031
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    |||||||| ||||| |||| |||||| ||||||||||||||||||||||    
T  9517079 tttgtcctcgtgagattagctcagttggtatgaacaatgcataatatat 9517031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 420
Target Start/End: Original strand, 27889282 - 27889330
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||| ||||||||||||||||||  ||||||||||||||| ||||||    
T  27889282 tgtcctcgtgagcttagttcagttatcatgaacaatgcataaaatatgt 27889330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 7201501 - 7201547
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| |||||||||| |||||| || ||||||||||||||||||||    
T  7201501 gtcctcgtgagcttagctcagttggtttgaacaatgcataatatatg 7201547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 9383276 - 9383230
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| |||||||||| |||||| ||||| |||||||||||||||||    
T  9383276 gtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 9383230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 419
Target Start/End: Complemental strand, 9537065 - 9537027
Alignment:
Q  381 gagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  9537065 gagcttagttcagttagtaagaacaatgcctaatatatg 9537027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 32204534 - 32204584
Alignment:
Q  369 atttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||| |||||||||| ||| || | |||||||||||||||||||||    
T  32204534 atttgtcctcgtgagcttagctcaattggcatgaacaatgcataatatatg 32204584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 419
Target Start/End: Complemental strand, 38443581 - 38443539
Alignment:
Q  377 ttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||  |||||| |||||||||||||||||||||||    
T  38443581 ttgtgagcttaactcagttcgtatgaacaatgcataatatatg 38443539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 419
Target Start/End: Original strand, 41311982 - 41312024
Alignment:
Q  377 ttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||||||||||| | | |||||||||||||||||    
T  41311982 ttgtgagcttagttcagttagcagggacaatgcataatatatg 41312024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 2429016 - 2429057
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||||||||||||| ||| | ||||||||||||||||||    
T  2429016 gtgagcttagttcagttggtaaggacaatgcataatatatgt 2429057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 4122083 - 4122034
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||| |||||||||| |||| | ||||| |||||||||||||||||    
T  4122083 tttgtcctcgtgagcttagctcagctggtatggacaatgcataatatatg 4122034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 8091228 - 8091179
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||||||||  |||||  ||||| |||||||||||||||||    
T  8091228 tttgtccttgtgagcttatctcagtaggtatggacaatgcataatatatg 8091179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 15770790 - 15770831
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||||||||| || ||||| ||||||||||||||||||    
T  15770790 gtgagcttagttcaattggtatggacaatgcataatatatgt 15770831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 419
Target Start/End: Original strand, 40546311 - 40546356
Alignment:
Q  374 tccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||| |||||||||| ||||||| || |||||||||||||||||||    
T  40546311 tcctcgtgagcttagctcagttaataagaacaatgcataatatatg 40546356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 419
Target Start/End: Original strand, 41668658 - 41668695
Alignment:
Q  382 agcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  41668658 agcttagctcagttggtatgaacaatgcataatatatg 41668695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 420
Target Start/End: Complemental strand, 41682456 - 41682407
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||||||||||||  |||||| |||| || ||||||||||||||||    
T  41682456 ttgtccttgtgagcttaactcagttggtataaataatgcataatatatgt 41682407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 43277042 - 43277075
Alignment:
Q  339 gagcatcttttgtcgtttaatataagttttattt 372  Q
    ||||||||||||||||||||||||||||| ||||    
T  43277042 gagcatcttttgtcgtttaatataagtttcattt 43277075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 420
Target Start/End: Complemental strand, 346192 - 346144
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||| |||||||||| |||||| || |||| ||||||||||||||||    
T  346192 tgtcctcgtgagcttagctcagttggtttgaataatgcataatatatgt 346144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 419
Target Start/End: Complemental strand, 2687439 - 2687395
Alignment:
Q  375 ccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||||| |||||| ||| ||||||||||| |||||||    
T  2687439 ccttgtgagcttagctcagttggtaagaacaatgcattatatatg 2687395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 419
Target Start/End: Original strand, 20200690 - 20200745
Alignment:
Q  363 agttttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| ||||||||  ||||||||| | || ||||||||||||||||||||||||||    
T  20200690 agtttcatttgtccccgtgagcttact-caattagtatgaacaatgcataatatatg 20200745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 420
Target Start/End: Original strand, 28644518 - 28644566
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||||||||||||  |||||| ||| | ||||||||||||||||||    
T  28644518 tgtccttgtgagcttaactcagttggtagggacaatgcataatatatgt 28644566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 420
Target Start/End: Complemental strand, 35404623 - 35404575
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||| || |||||||||||||| |||||||||||| |||| ||||||    
T  35404623 tgtcctcgttagcttagttcagttggtatgaacaatgtataaaatatgt 35404575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 42714439 - 42714479
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||||||| ||||| ||||||||||| |||||    
T  42714439 gtgagcttagttcagttggtatggacaatgcataaaatatg 42714479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 44526122 - 44526166
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatata 417  Q
    ||||| |||||||||| |||||| ||||| |||||||||||||||    
T  44526122 gtcctcgtgagcttagctcagttggtatggacaatgcataatata 44526166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 418
Target Start/End: Original strand, 35308177 - 35308224
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  35308177 ttgtcctcgtgagcttagttcagttggtatgaacaatgcataatatat 35308224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 1794588 - 1794636
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| |||||||||| |||||||||||| |||||||||||||||||    
T  1794588 ttgtcctcgtgagcttagctcagttagtatggacaatgcataatatatg 1794636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 419
Target Start/End: Original strand, 8384237 - 8384291
Alignment:
Q  365 ttttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||  || ||||||||||||||||||||||||| |||| ||||||||||    
T  8384237 ttttatttgctctcgtgagcttagttcagttagtatgaataatgtataatatatg 8384291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 25532967 - 25533013
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||||||    
T  25532967 gtcctcgtgagcttagttcagttggtatggacaatgcataatatatg 25533013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 48682000 - 48681954
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| |||||||||| |||||| |||||||||||||||||||||||    
T  48682000 gtcctcgtgagcttagctcagttggtatgaacaatgcataatatatg 48681954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 28832240 - 28832192
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||| ||||||||||||  |||||| |||||||||||||||||||||||    
T  28832240 ttgttcttgtgagcttaactcagttggtatgaacaatgcataatatatg 28832192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 367 - 419
Target Start/End: Original strand, 30795689 - 30795741
Alignment:
Q  367 ttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||| |||| ||||| |||||| ||| |||||||||||||||||||    
T  30795689 ttatttgtcctcgtgaacttagctcagttggtaagaacaatgcataatatatg 30795741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 32944728 - 32944776
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||||||||| | |||| ||||| |||||||||||||||||    
T  32944728 ttgtccttgtgagcttagcttagttggtatggacaatgcataatatatg 32944776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 369 - 413
Target Start/End: Original strand, 39452450 - 39452494
Alignment:
Q  369 atttgtccttgtgagcttagttcagttagtatgaacaatgcataa 413  Q
    ||||||||| |||||||||| |||||| |||||||||||||||||    
T  39452450 atttgtcctcgtgagcttagctcagttggtatgaacaatgcataa 39452494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 42045440 - 42045393
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||| |||||||||| |||||| ||||| |||||||||||||||||    
T  42045440 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 42045393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Original strand, 44340883 - 44340922
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  44340883 gtgagcttagttcagttagtatggacaatgcatgatatat 44340922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 5320920 - 5320871
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||||||||||||||| |||||| ||| |||| |||||||||||||||    
T  5320920 tttgtccttgtgagcttagctcagttggtaagaac-atgcataatatatgt 5320871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 419
Target Start/End: Original strand, 8253737 - 8253779
Alignment:
Q  377 ttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||| |||||| ||||| |||||||||||||||||    
T  8253737 ttgtgagcttagctcagttggtatggacaatgcataatatatg 8253779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 413
Target Start/End: Original strand, 15892797 - 15892831
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataa 413  Q
    ||||||||||||||||| |||||||||||||||||    
T  15892797 gtgagcttagttcagttggtatgaacaatgcataa 15892831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 415
Target Start/End: Complemental strand, 24752719 - 24752673
Alignment:
Q  369 atttgtccttgtgagcttagttcagttagtatgaacaatgcataata 415  Q
    ||||||||| |||||||||| |||||| ||||| |||||||||||||    
T  24752719 atttgtcctcgtgagcttagctcagttggtatggacaatgcataata 24752673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 25086477 - 25086523
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||||||| |||||| ||||| ||||||||||| |||||    
T  25086477 gtccttgtgagcttagctcagttggtatggacaatgcataaaatatg 25086523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 27449512 - 27449466
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| |||||||||| ||||||| |||| |||||||||||||||||    
T  27449512 gtcctcgtgagcttagctcagttaatatggacaatgcataatatatg 27449466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 419
Target Start/End: Original strand, 29935969 - 29936023
Alignment:
Q  365 ttttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||| |||||||||||||| |||  |||||| ||||| |||||||||||||||||    
T  29935969 ttttttttgtccttgtgagtttaactcagttggtatggacaatgcataatatatg 29936023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 48100716 - 48100762
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||||||| |||||| ||||| ||||||||||| |||||    
T  48100716 gtccttgtgagcttagctcagttggtatggacaatgcataaaatatg 48100762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 419
Target Start/End: Complemental strand, 52441582 - 52441532
Alignment:
Q  369 atttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||| |||||||||| |||||| ||||  |||||||||||||||||    
T  52441582 atttgtcctcgtgagcttagctcagttggtatagacaatgcataatatatg 52441532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 9413798 - 9413839
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||    
T  9413798 gtgagtttagttcagttggtaagaacaatgcataatatatgt 9413839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 420
Target Start/End: Complemental strand, 15602250 - 15602197
Alignment:
Q  367 ttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||| ||||| |||||| ||| |||||| ||||| ||||||||||||||||||    
T  15602250 ttattagtcctcgtgagcatagctcagttggtatggacaatgcataatatatgt 15602197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 418
Target Start/End: Original strand, 19316167 - 19316216
Alignment:
Q  369 atttgtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    |||||| |||||||| |||  ||| |||||||||||||||||||||||||    
T  19316167 atttgttcttgtgagtttaactcaattagtatgaacaatgcataatatat 19316216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 418
Target Start/End: Original strand, 27853349 - 27853394
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||| |||||||||  |||||| ||||||||||||||||||||||    
T  27853349 gtcctcgtgagcttaactcagttggtatgaacaatgcataatatat 27853394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 28460240 - 28460289
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||| ||| ||||||||||||| |||||||||||| |||| |||||    
T  28460240 tttgtcctcgtgggcttagttcagttcgtatgaacaatgtataaaatatg 28460289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 30003201 - 30003242
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||    
T  30003201 gtgagcttaattcagttggtatggacaatgcataatatatgt 30003242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 37045216 - 37045167
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||| ||||||| || |||||| ||| |||||||||||||||||||    
T  37045216 tttgtcctcgtgagctcagctcagttggtaggaacaatgcataatatatg 37045167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 418
Target Start/End: Complemental strand, 3157783 - 3157739
Alignment:
Q  374 tccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    |||| |||||||||| ||| ||||| |||||||||||||||||||    
T  3157783 tcctcgtgagcttagctcaattagtttgaacaatgcataatatat 3157739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 36467094 - 36467046
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||||||| |||| ||  |||| |||||||||||||||||    
T  36467094 ttgtccttgtgagcttaattcaattgatatggacaatgcataatatatg 36467046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 45140067 - 45140027
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||| |||||| ||||| |||||||||||||||||    
T  45140067 gtgagcttagctcagttggtatggacaatgcataatatatg 45140027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 45190330 - 45190290
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||| |||||||||||| ||||| |||||||||||||||||    
T  45190330 gtgaacttagttcagttggtatggacaatgcataatatatg 45190290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 303 - 380
Target Start/End: Complemental strand, 43903590 - 43903512
Alignment:
Q  303 tttgttgcccttccttggcacaccatgtgctgagaagagcatcttttgtcgttta-atataagttttatttgtccttgt 380  Q
    |||||||  |||||||| |||||| |||| | |||||||||||||||||| |||| |||||||||||||||| ||||||    
T  43903590 tttgttggtcttccttgacacaccttgtgttaagaagagcatcttttgtcatttatatataagttttatttggccttgt 43903512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 53996290 - 53996339
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  53996290 tttgtccttgtgagcttagctcagttggtatggacaatgcataatatatg 53996339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 379 - 418
Target Start/End: Original strand, 7938724 - 7938763
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  7938724 gtgagcttagttcagttggtatgaacaatgcataatatat 7938763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 419
Target Start/End: Original strand, 22722395 - 22722442
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||| |||||||||| |||||||||||||||||||||||| |||||    
T  22722395 tgtcctcgtgagcttagctcagttagtatgaacaatgcataaaatatg 22722442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 415
Target Start/End: Complemental strand, 15690990 - 15690948
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataata 415  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  15690990 gtccttgtgagcttagttcagttactatgaacaatacataata 15690948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 373 - 418
Target Start/End: Original strand, 2496549 - 2496594
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||    
T  2496549 gtcctcgtgagcttagttcagttgctatgaacaatgcataatatat 2496594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 419
Target Start/End: Original strand, 13800642 - 13800707
Alignment:
Q  354 tttaatataagttttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||  || || ||||| ||||||||||| |||||| ||| |||||||||||||||||||    
T  13800642 tttaatataaccttgatatgtccatgtgagcttagctcagttggtaagaacaatgcataatatatg 13800707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 420
Target Start/End: Complemental strand, 19126746 - 19126697
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||||||||| |||||||||| ||||| ||||||||||| ||||||    
T  19126746 ttgtccttgtgagcgtagttcagttggtatggacaatgcataaaatatgt 19126697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 2753773 - 2753725
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||  ||||| |||||||||||||||| |||||||||||||||||    
T  2753773 ttgtcctcttgagcatagttcagttagtatggacaatgcataatatatg 2753725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 368 - 420
Target Start/End: Original strand, 32632310 - 32632362
Alignment:
Q  368 tatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||||| |||||||| | |||||| |||| |||||||||||||||||||    
T  32632310 tatttgtcctcgtgagctttgctcagttggtataaacaatgcataatatatgt 32632362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 376 - 420
Target Start/End: Original strand, 42269295 - 42269339
Alignment:
Q  376 cttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||| |||| |||||||||||| ||||||||||||||||||    
T  42269295 cttgtgagtttagctcagttagtatggacaatgcataatatatgt 42269339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 43490478 - 43490438
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  43490478 gtgagcttagctcagttggtatgaacaatgcataatatatg 43490438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 52172856 - 52172808
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| |||||| |||||| ||||||||| |||||||||||||||||    
T  52172856 ttgtcctcgtgagcatagttcggttagtatggacaatgcataatatatg 52172808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 419
Target Start/End: Original strand, 7868707 - 7868762
Alignment:
Q  364 gttttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||  ||||| |||||||||| |||||| ||| |||||||||||||||||||    
T  7868707 gttttatgcgtcctcgtgagcttagctcagttggtaagaacaatgcataatatatg 7868762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 10498763 - 10498716
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||| |||||||||| |||||| ||||| |||||||||||||||||    
T  10498763 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatg 10498716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 419
Target Start/End: Complemental strand, 21331488 - 21331438
Alignment:
Q  369 atttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||| |||||||||| ||||||  |||| |||||||||||||||||    
T  21331488 atttgtcctcgtgagcttagctcagttgttatggacaatgcataatatatg 21331438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 38131026 - 38130980
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||||||  |||||| ||||| |||||||||||||||||    
T  38131026 gtccttgtgagcttaactcagttggtatggacaatgcataatatatg 38130980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 417
Target Start/End: Original strand, 41493903 - 41493941
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatata 417  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  41493903 gtgaacttagttcagttggtatgaacaatgcataatata 41493941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 415
Target Start/End: Original strand, 5030200 - 5030241
Alignment:
Q  374 tccttgtgagcttagttcagttagtatgaacaatgcataata 415  Q
    |||| ||||| ||||||||||| |||||||||||||||||||    
T  5030200 tcctcgtgagtttagttcagttggtatgaacaatgcataata 5030241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 419
Target Start/End: Original strand, 8139710 - 8139755
Alignment:
Q  374 tccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||| |||||||||||| |||| ||||| |||||||||||||||||    
T  8139710 tcctcgtgagcttagtttagttggtatggacaatgcataatatatg 8139755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 19468442 - 19468491
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||| |||||||||||  |||||| ||||| |||||||||||||||||    
T  19468442 tttgtctttgtgagcttaactcagttggtatggacaatgcataatatatg 19468491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 29334578 - 29334619
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||||| |||||||||| | ||||||||||||||||||    
T  29334578 gtgagcttagatcagttagtaaggacaatgcataatatatgt 29334619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 418
Target Start/End: Complemental strand, 38559963 - 38559918
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    |||||||||||| ||  |||||| ||||||||||||||||||||||    
T  38559963 gtccttgtgagcgtaactcagttggtatgaacaatgcataatatat 38559918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 529180 - 529220
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||||||||| ||||  |||||||||||||||||    
T  529180 gtgagcttagttcagttggtatcgacaatgcataatatatg 529220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 5941355 - 5941315
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||  |||||| |||||||||||||||||||||||    
T  5941355 gtgagcttaactcagttggtatgaacaatgcataatatatg 5941315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 8942017 - 8942057
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||  |||||| |||||||||||||||||||||||    
T  8942017 gtgagcttaactcagttggtatgaacaatgcataatatatg 8942057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 20296286 - 20296334
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| ||||||||| ||||||||  ||| |||||||||||||||||    
T  20296286 ttgtcctcgtgagcttaattcagttaacatggacaatgcataatatatg 20296334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 25441569 - 25441521
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| |||||| ||||| |||||| ||||| |||||||||||||||||    
T  25441569 ttgtctttgtgaacttagctcagttggtatggacaatgcataatatatg 25441521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 419
Target Start/End: Complemental strand, 25917658 - 25917606
Alignment:
Q  367 ttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||| ||||||||||||||||||||   | | |||||||||||||||||    
T  25917658 ttatttgtacttgtgagcttagttcagtttacaaggacaatgcataatatatg 25917606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 420
Target Start/End: Complemental strand, 33633386 - 33633338
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||| |||||||||  |||||||||||  ||||||||||||||||||    
T  33633386 tgtcctcgtgagcttaactcagttagtatagacaatgcataatatatgt 33633338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 39083902 - 39083854
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||  ||||| |||||||||||| ||| |||||||||||||||||    
T  39083902 ttgtcctcttgagcatagttcagttagcatggacaatgcataatatatg 39083854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 420
Target Start/End: Complemental strand, 54020717 - 54020669
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||| |||||||||||| | |||| ||| ||||||||||||||||||||    
T  54020717 tgtcattgtgagcttagcttagttggtaggaacaatgcataatatatgt 54020669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 419
Target Start/End: Complemental strand, 20469386 - 20469332
Alignment:
Q  365 ttttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||| || |||||||||| |||||| |||| ||||||||||||||||||    
T  20469386 ttttatttgttctcgtgagcttagatcagttggtataaacaatgcataatatatg 20469332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 373 - 418
Target Start/End: Original strand, 8982561 - 8982606
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||||||    
T  8982561 gtcctcgtgagtttaattcagttagtatgaacaatgcataatatat 8982606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 7996932 - 7996980
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||||||||| |||||| ||||| |||| ||||||||||||    
T  7996932 ttgtccttgtgagcttagctcagttggtatggacaacgcataatatatg 7996980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 419
Target Start/End: Complemental strand, 8910053 - 8910002
Alignment:
Q  368 tatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||| ||||||||||| |||||| ||| | |||||||||||||||||    
T  8910053 tatttgtccatgtgagcttagctcagttggtaaggacaatgcataatatatg 8910002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 420
Target Start/End: Original strand, 21557427 - 21557474
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||| |||||||||  |||||||||||| ||||||||||||||||||    
T  21557427 gtcctcgtgagcttaactcagttagtatggacaatgcataatatatgt 21557474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 418
Target Start/End: Original strand, 33445562 - 33445609
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||||| |||||||||| |||||| ||| ||||||||||||||||||    
T  33445562 ttgtcctcgtgagcttagctcagttggtaggaacaatgcataatatat 33445609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 12910873 - 12910827
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||||| |||| |||||| ||||| |||||||||||||||||    
T  12910873 gtccttgtgagattagctcagttggtatggacaatgcataatatatg 12910827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 415
Target Start/End: Original strand, 15225799 - 15225841
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataata 415  Q
    |||||||||||||||  |||||||||||| |||||||||||||    
T  15225799 gtccttgtgagcttaactcagttagtatggacaatgcataata 15225841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 419
Target Start/End: Original strand, 30427729 - 30427771
Alignment:
Q  377 ttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||| |||||| ||||| |||||||||||||||||    
T  30427729 ttgtgagcttagctcagttggtatggacaatgcataatatatg 30427771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 420
Target Start/End: Complemental strand, 6235620 - 6235571
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||||||||| |||| |||||| ||||| || |||||||||||||||    
T  6235620 ttgtccttgtgagtttagctcagttggtatggacgatgcataatatatgt 6235571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 366
Target Start/End: Original strand, 13948817 - 13948899
Alignment:
Q  280 tgaagtgctgtatttgaacttaatttgttgcccttccttggcacaccatgtgctgagaagagcatcttttgtcgtttaatataagtt 366  Q
    ||||||| |||||||||||||    |||| | |||||||  |||| | |||| ||||| ||||||||||| ||||||||||||||||    
T  13948817 tgaagtgttgtatttgaactt----tgttactcttccttaacacaacttgtgttgagaggagcatcttttatcgtttaatataagtt 13948899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 15188899 - 15188940
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||||  |||||||||||| ||||||||||||||||||    
T  15188899 gtgagcttaactcagttagtatggacaatgcataatatatgt 15188940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 418
Target Start/End: Complemental strand, 18148869 - 18148824
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||| |||||||||  ||||||| |||||||||||||||||||||    
T  18148869 gtcctcgtgagcttaactcagttaatatgaacaatgcataatatat 18148824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Original strand, 23816777 - 23816830
Alignment:
Q  366 tttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||| |||||||||| |||||| ||| | | |||||||||||||||    
T  23816777 tttatttgtcctcgtgagcttagctcagttggtaaggataatgcataatatatg 23816830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 23852902 - 23852951
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||| |||||||||| |||||  ||||| |||||||||||||||||    
T  23852902 tttgtcctcgtgagcttagctcagtcggtatggacaatgcataatatatg 23852951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 32051602 - 32051553
Alignment:
Q  370 tttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| ||||||||||| |||||| || || |||||||||||||||||    
T  32051602 tttgtccatgtgagcttagctcagttggtttggacaatgcataatatatg 32051553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Complemental strand, 32115467 - 32115426
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||| |||||||||||| |||| ||||||||||||||||||    
T  32115467 gtgagtttagttcagttaatatggacaatgcataatatatgt 32115426  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 33620884 - 33620937
Alignment:
Q  365 ttttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||||||||| | ||||| |||  |||||||||||| ||||||||||||||||    
T  33620884 ttttatttgtcttcgtgagtttaactcagttagtatggacaatgcataatatat 33620937  T

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Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 418
Target Start/End: Complemental strand, 37117591 - 37117546
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||| |||||||||| ||| || ||||||||||||||||||||||    
T  37117591 gtcctcgtgagcttagatcaattggtatgaacaatgcataatatat 37117546  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 41625194 - 41625235
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    |||||||||| |||||| ||||||| ||||||||||||||||    
T  41625194 gtgagcttagctcagttggtatgaataatgcataatatatgt 41625235  T

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Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 420
Target Start/End: Original strand, 574377 - 574425
Alignment:
Q  372 tgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||||||||||||| ||||||  |||  ||||||||||||||||||    
T  574377 tgtccttgtgagcttagctcagttgatatagacaatgcataatatatgt 574425  T

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Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 419
Target Start/End: Original strand, 2060633 - 2060685
Alignment:
Q  367 ttatttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||| ||||||||||||||||| |||| | |||||||||||| |||| |||||    
T  2060633 ttatatgtccttgtgagcttagctcagctggtatgaacaatggataacatatg 2060685  T

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Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 2958425 - 2958461
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataata 415  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  2958425 gtgagcttagttcagttggtatggacaatgcataata 2958461  T

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Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 10601763 - 10601803
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||||| ||||||| ||||| |||||||||||||||||    
T  10601763 gtgagcttaattcagttggtatggacaatgcataatatatg 10601803  T

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Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 32878661 - 32878701
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||| |||||| ||| |||||||||||||||||||    
T  32878661 gtgagcttagctcagttggtaagaacaatgcataatatatg 32878701  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 33451418 - 33451370
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| |||||||||| |||||| ||||| | |||||||||||||||    
T  33451418 ttgtcctcgtgagcttagctcagttggtatggataatgcataatatatg 33451370  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 40795369 - 40795417
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||| |||||||||||  |||||| ||||||||||| |||||||||||    
T  40795369 ttgtcattgtgagcttaactcagttggtatgaacaatacataatatatg 40795417  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 223738 - 223698
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  223738 gtgagcttagctcagttagtttgaacaatgcataatatatg 223698  T

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Target: scaffold0098 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 418
Target Start/End: Original strand, 5419 - 5464
Alignment:
Q  373 gtccttgtgagcttagttcagttagtatgaacaatgcataatatat 418  Q
    ||||| |||||||||| |||||| ||| ||||||||||||||||||    
T  5419 gtcctcgtgagcttagctcagttggtaagaacaatgcataatatat 5464  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 420
Target Start/End: Original strand, 118811 - 118860
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||| |||||||||| |||||| || |||||||||||||| ||||||    
T  118811 ttgtcctcgtgagcttagctcagttggtttgaacaatgcataaaatatgt 118860  T

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Target: scaffold0458 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 413
Target Start/End: Complemental strand, 11223 - 11179
Alignment:
Q  369 atttgtccttgtgagcttagttcagttagtatgaacaatgcataa 413  Q
    ||||||||| |||||||||| |||||| ||||| |||||||||||    
T  11223 atttgtcctcgtgagcttagatcagttggtatggacaatgcataa 11179  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 39998 - 40038
Alignment:
Q  379 gtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||| |||||| ||||| |||||||||||||||||    
T  39998 gtgagcttagctcagttggtatggacaatgcataatatatg 40038  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 420
Target Start/End: Original strand, 35179 - 35219
Alignment:
Q  380 tgagcttagttcagttagtatgaacaatgcataatatatgt 420  Q
    ||||||||| |||||||||||  ||||||||||||||||||    
T  35179 tgagcttagctcagttagtatagacaatgcataatatatgt 35219  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 64210 - 64258
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    |||||||||||||||||| |||  | ||||| |||||||||||||||||    
T  64210 ttgtccttgtgagcttagctcaactggtatggacaatgcataatatatg 64258  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 185255 - 185303
Alignment:
Q  371 ttgtccttgtgagcttagttcagttagtatgaacaatgcataatatatg 419  Q
    ||||||| |||||||||| |||||| ||||| ||||||||||| |||||    
T  185255 ttgtcctcgtgagcttagctcagttggtatggacaatgcataaaatatg 185303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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