View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17264_low_42 (Length: 301)

Name: NF17264_low_42
Description: NF17264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17264_low_42
NF17264_low_42
[»] chr5 (50 HSPs)
chr5 (1-301)||(39574175-39574473)
chr5 (5-234)||(36798173-36798407)
chr5 (5-155)||(19340843-19340997)
chr5 (5-165)||(2974704-2974864)
chr5 (5-165)||(12406124-12406283)
chr5 (5-137)||(6130337-6130470)
chr5 (5-165)||(32391801-32391962)
chr5 (4-143)||(3999167-3999317)
chr5 (5-234)||(37897800-37898028)
chr5 (62-234)||(27904620-27904794)
chr5 (5-158)||(9852864-9853016)
chr5 (5-165)||(31080547-31080711)
chr5 (5-234)||(40276101-40276341)
chr5 (5-143)||(22300695-22300843)
chr5 (5-107)||(21066471-21066571)
chr5 (5-234)||(3333774-3334012)
chr5 (5-153)||(28446087-28446235)
chr5 (5-165)||(18403057-18403223)
chr5 (179-236)||(3999087-3999144)
chr5 (180-236)||(25364082-25364138)
chr5 (61-165)||(25910794-25910901)
chr5 (124-245)||(32391711-32391832)
chr5 (124-234)||(2974833-2974945)
chr5 (5-165)||(20629820-20629987)
chr5 (56-157)||(26702514-26702618)
chr5 (56-157)||(26972247-26972351)
chr5 (61-165)||(16132815-16132922)
chr5 (58-158)||(20512274-20512377)
chr5 (122-234)||(35166491-35166604)
chr5 (189-235)||(3333694-3333740)
chr5 (61-158)||(34320083-34320183)
chr5 (190-234)||(25910992-25911036)
chr5 (179-234)||(12406044-12406099)
chr5 (187-234)||(20512463-20512510)
chr5 (113-236)||(20629737-20629862)
chr5 (189-236)||(43098029-43098076)
chr5 (179-233)||(34319964-34320017)
chr5 (189-234)||(586678-586723)
chr5 (2-140)||(24779371-24779508)
chr5 (179-234)||(18403246-18403300)
chr5 (54-165)||(30604216-30604330)
chr5 (63-158)||(35166373-35166471)
chr5 (179-234)||(36798432-36798487)
chr5 (180-234)||(6464332-6464386)
chr5 (5-39)||(30603695-30603729)
chr5 (61-155)||(43098163-43098260)
chr5 (189-234)||(35877545-35877590)
chr5 (187-236)||(40133143-40133192)
chr5 (54-98)||(31157031-31157075)
chr5 (5-49)||(43098215-43098258)
[»] chr7 (53 HSPs)
chr7 (5-234)||(35250122-35250351)
chr7 (5-165)||(15107075-15107235)
chr7 (5-239)||(18186522-18186768)
chr7 (5-157)||(41243721-41243874)
chr7 (5-165)||(18504314-18504472)
chr7 (5-140)||(21505697-21505833)
chr7 (5-165)||(36580356-36580518)
chr7 (113-234)||(28350119-28350241)
chr7 (5-138)||(19644902-19645034)
chr7 (5-153)||(28472470-28472610)
chr7 (5-157)||(15348029-15348188)
chr7 (5-157)||(36903341-36903502)
chr7 (5-155)||(44312827-44312975)
chr7 (113-234)||(9500090-9500213)
chr7 (5-158)||(28785840-28785991)
chr7 (179-234)||(4049977-4050032)
chr7 (5-234)||(20184919-20185148)
chr7 (191-234)||(21748082-21748125)
chr7 (5-142)||(23826115-23826250)
chr7 (123-234)||(14247297-14247408)
chr7 (180-234)||(20185172-20185226)
chr7 (5-158)||(23745970-23746120)
chr7 (113-234)||(15348146-15348269)
chr7 (187-236)||(19645065-19645114)
chr7 (5-154)||(5172593-5172755)
chr7 (6-153)||(8073957-8074104)
chr7 (190-234)||(8074142-8074186)
chr7 (61-165)||(15029132-15029238)
chr7 (181-233)||(28785760-28785812)
chr7 (61-165)||(29834287-29834394)
chr7 (113-234)||(36580277-36580398)
chr7 (1-115)||(40872245-40872356)
chr7 (5-64)||(4049894-4049953)
chr7 (62-234)||(6726392-6726570)
chr7 (187-234)||(17876421-17876468)
chr7 (187-234)||(23826286-23826333)
chr7 (179-234)||(45697490-45697545)
chr7 (180-234)||(21939331-21939385)
chr7 (193-234)||(11373850-11373891)
chr7 (179-236)||(20505099-20505156)
chr7 (187-242)||(3247435-3247490)
chr7 (5-64)||(17876330-17876389)
chr7 (190-237)||(23746161-23746208)
chr7 (179-214)||(24432981-24433016)
chr7 (179-234)||(41243900-41243955)
chr7 (179-234)||(47909697-47909752)
chr7 (5-59)||(11374032-11374086)
chr7 (180-234)||(20505266-20505320)
chr7 (189-234)||(6726261-6726305)
chr7 (179-236)||(6792052-6792109)
chr7 (187-236)||(18186440-18186489)
chr7 (189-234)||(18504505-18504550)
chr7 (180-236)||(42438033-42438089)
[»] chr4 (75 HSPs)
chr4 (1-158)||(43074667-43074824)
chr4 (5-165)||(51362610-51362770)
chr4 (5-157)||(21597484-21597637)
chr4 (5-165)||(2836970-2837131)
chr4 (5-234)||(12719531-12719757)
chr4 (15-234)||(53312289-53312508)
chr4 (5-169)||(53924829-53924998)
chr4 (1-115)||(42526043-42526153)
chr4 (5-236)||(50769364-50769594)
chr4 (5-158)||(6637148-6637299)
chr4 (5-165)||(10059766-10059940)
chr4 (61-234)||(44356534-44356707)
chr4 (5-142)||(6614928-6615060)
chr4 (5-234)||(14449356-14449596)
chr4 (5-158)||(2654037-2654205)
chr4 (1-165)||(6207255-6207417)
chr4 (179-239)||(14449271-14449331)
chr4 (61-142)||(49185665-49185747)
chr4 (61-234)||(25909490-25909665)
chr4 (113-234)||(50769552-50769672)
chr4 (180-234)||(35383768-35383822)
chr4 (5-158)||(54855382-54855539)
chr4 (63-168)||(4796178-4796286)
chr4 (54-158)||(2016869-2016975)
chr4 (187-234)||(43074619-43074666)
chr4 (5-115)||(34771353-34771462)
chr4 (188-234)||(35393934-35393980)
chr4 (5-158)||(51371541-51371695)
chr4 (5-169)||(8965603-8965763)
chr4 (190-235)||(21322709-21322754)
chr4 (5-165)||(21871462-21871630)
chr4 (5-165)||(21927323-21927491)
chr4 (5-234)||(27978695-27978930)
chr4 (5-165)||(29697593-29697753)
chr4 (125-234)||(6614850-6614958)
chr4 (5-234)||(11824191-11824427)
chr4 (189-236)||(3658190-3658237)
chr4 (56-142)||(8070721-8070808)
chr4 (63-234)||(20112288-20112460)
chr4 (54-140)||(35383888-35383975)
chr4 (55-158)||(54983963-54984069)
chr4 (56-234)||(1420675-1420855)
chr4 (1-59)||(1571585-1571643)
chr4 (190-236)||(4411493-4411539)
chr4 (190-236)||(16292534-16292580)
chr4 (188-234)||(35615433-35615478)
chr4 (188-234)||(51371728-51371774)
chr4 (185-234)||(11824460-11824509)
chr4 (5-169)||(21322790-21322958)
chr4 (179-236)||(37831593-37831650)
chr4 (61-137)||(51233582-51233658)
chr4 (189-234)||(53312551-53312596)
chr4 (182-234)||(2653956-2654008)
chr4 (5-57)||(3658104-3658156)
chr4 (61-136)||(35393402-35393478)
chr4 (8-64)||(35393841-35393897)
chr4 (1-32)||(4796114-4796145)
chr4 (1-59)||(8070822-8070878)
chr4 (187-234)||(23759564-23759611)
chr4 (187-234)||(27978960-27979007)
chr4 (179-234)||(29697778-29697832)
chr4 (179-234)||(49185815-49185869)
chr4 (6-64)||(14016906-14016964)
chr4 (1-59)||(20117978-20118036)
chr4 (61-115)||(21451581-21451635)
chr4 (5-98)||(26089610-26089701)
chr4 (5-58)||(2181304-2181356)
chr4 (70-142)||(47999625-47999698)
chr4 (189-234)||(53924750-53924795)
chr4 (54-102)||(6768924-6768972)
chr4 (180-236)||(8965523-8965579)
chr4 (187-231)||(18937248-18937292)
chr4 (182-234)||(21451462-21451514)
chr4 (198-234)||(34771275-34771311)
chr4 (191-239)||(54983846-54983894)
[»] chr1 (59 HSPs)
chr1 (5-234)||(17760685-17760921)
chr1 (3-165)||(41997720-41997884)
chr1 (5-165)||(50401442-50401603)
chr1 (5-234)||(3377504-3377743)
chr1 (9-165)||(44672383-44672539)
chr1 (5-157)||(46572905-46573058)
chr1 (5-157)||(12960928-12961080)
chr1 (3-158)||(16298139-16298293)
chr1 (1-165)||(45739006-45739171)
chr1 (5-165)||(32295035-32295196)
chr1 (61-157)||(1853591-1853688)
chr1 (5-169)||(25486281-25486443)
chr1 (5-58)||(23891742-23891795)
chr1 (61-165)||(23220637-23220744)
chr1 (5-165)||(39642283-39642451)
chr1 (187-234)||(39642203-39642250)
chr1 (5-153)||(46505255-46505401)
chr1 (9-158)||(14978874-14979028)
chr1 (5-140)||(46912272-46912407)
chr1 (192-247)||(16874498-16874553)
chr1 (62-165)||(16874640-16874746)
chr1 (187-234)||(18632603-18632650)
chr1 (179-234)||(23891663-23891718)
chr1 (9-157)||(30849307-30849465)
chr1 (5-153)||(49426078-49426223)
chr1 (62-142)||(25085530-25085611)
chr1 (185-234)||(25486474-25486523)
chr1 (187-236)||(45739197-45739246)
chr1 (61-167)||(20224667-20224775)
chr1 (188-236)||(46912191-46912239)
chr1 (179-234)||(46573083-46573138)
chr1 (190-236)||(1096717-1096763)
chr1 (5-158)||(15659063-15659227)
chr1 (180-234)||(42924331-42924385)
chr1 (5-134)||(7060711-7060849)
chr1 (187-236)||(11050430-11050478)
chr1 (189-234)||(25085402-25085447)
chr1 (63-164)||(50226529-50226633)
chr1 (179-236)||(50401627-50401684)
chr1 (189-236)||(1853447-1853494)
chr1 (20-98)||(5287324-5287400)
chr1 (179-234)||(6320837-6320891)
chr1 (189-236)||(7060628-7060675)
chr1 (187-234)||(14979064-14979111)
chr1 (179-234)||(18216689-18216744)
chr1 (188-231)||(23220826-23220869)
chr1 (189-236)||(46880739-46880786)
chr1 (5-59)||(6320759-6320812)
chr1 (180-234)||(37008220-37008274)
chr1 (181-234)||(3377769-3377822)
chr1 (9-54)||(6569613-6569658)
chr1 (187-236)||(8009730-8009779)
chr1 (56-140)||(23356791-23356876)
chr1 (87-143)||(23891797-23891854)
chr1 (187-236)||(41997641-41997690)
chr1 (61-165)||(7579735-7579842)
chr1 (77-157)||(8301497-8301580)
chr1 (54-98)||(13791717-13791761)
chr1 (5-123)||(46880820-46880941)
[»] chr3 (69 HSPs)
chr3 (9-236)||(44585874-44586099)
chr3 (4-165)||(43747360-43747523)
chr3 (5-165)||(44436471-44436641)
chr3 (56-234)||(51315615-51315795)
chr3 (5-98)||(12759590-12759681)
chr3 (5-165)||(54719073-54719240)
chr3 (5-154)||(4474150-4474301)
chr3 (1-165)||(14856625-14856799)
chr3 (5-157)||(54464241-54464394)
chr3 (5-142)||(7218235-7218369)
chr3 (8-157)||(8024860-8025017)
chr3 (61-157)||(33329753-33329852)
chr3 (61-153)||(47189730-47189825)
chr3 (180-234)||(36677527-36677581)
chr3 (180-234)||(36687609-36687663)
chr3 (56-144)||(19404525-19404614)
chr3 (5-157)||(1814631-1814789)
chr3 (179-234)||(14856549-14856604)
chr3 (179-234)||(17773173-17773228)
chr3 (179-234)||(19074474-19074529)
chr3 (5-158)||(28712532-28712693)
chr3 (179-234)||(33329614-33329669)
chr3 (5-115)||(3192897-3193013)
chr3 (1-157)||(14340812-14340969)
chr3 (179-236)||(43747280-43747337)
chr3 (5-115)||(52008368-52008479)
chr3 (113-247)||(44433253-44433390)
chr3 (56-154)||(3916511-3916612)
chr3 (5-98)||(25154322-25154412)
chr3 (187-245)||(25248949-25249007)
chr3 (180-234)||(28204483-28204537)
chr3 (180-234)||(46226944-46226998)
chr3 (188-234)||(48348258-48348304)
chr3 (5-157)||(44624703-44624861)
chr3 (189-234)||(54718997-54719042)
chr3 (61-169)||(86640-86751)
chr3 (180-236)||(4474324-4474380)
chr3 (190-234)||(14349375-14349419)
chr3 (43-156)||(36677627-36677745)
chr3 (179-234)||(86820-86875)
chr3 (179-234)||(3193037-3193092)
chr3 (63-158)||(25843443-25843541)
chr3 (179-234)||(25902609-25902664)
chr3 (66-165)||(27178288-27178390)
chr3 (179-234)||(28712717-28712772)
chr3 (119-234)||(35359179-35359295)
chr3 (43-98)||(36687709-36687764)
chr3 (113-165)||(38957917-38957971)
chr3 (188-234)||(14340736-14340782)
chr3 (61-142)||(20432320-20432402)
chr3 (9-59)||(25902488-25902538)
chr3 (5-136)||(14992704-14992843)
chr3 (189-234)||(38958109-38958154)
chr3 (190-234)||(19404401-19404445)
chr3 (191-243)||(27178134-27178186)
chr3 (190-234)||(53184784-53184828)
chr3 (179-234)||(20432193-20432248)
chr3 (63-157)||(578551-578648)
chr3 (179-245)||(7218411-7218477)
chr3 (184-234)||(44433058-44433107)
chr3 (180-234)||(47189601-47189655)
chr3 (5-158)||(48348337-48348494)
chr3 (189-234)||(53020530-53020576)
chr3 (10-142)||(53184605-53184744)
chr3 (179-236)||(25843593-25843650)
chr3 (5-38)||(51315577-51315610)
chr3 (54-98)||(19914617-19914661)
chr3 (113-158)||(28944106-28944153)
chr3 (61-140)||(37182134-37182214)
[»] chr6 (35 HSPs)
chr6 (5-233)||(10727273-10727504)
chr6 (3-234)||(30349352-30349588)
chr6 (5-136)||(18031016-18031154)
chr6 (62-165)||(32143329-32143435)
chr6 (113-234)||(12766404-12766525)
chr6 (8-165)||(26311480-26311647)
chr6 (5-99)||(12766355-12766446)
chr6 (5-59)||(33401232-33401286)
chr6 (61-158)||(5003215-5003315)
chr6 (113-234)||(6036647-6036769)
chr6 (64-157)||(6036799-6036895)
chr6 (5-90)||(1377356-1377439)
chr6 (5-90)||(1385104-1385187)
chr6 (5-57)||(2840872-2840924)
chr6 (6-165)||(17248707-17248872)
chr6 (180-234)||(33401310-33401364)
chr6 (189-234)||(238933-238978)
chr6 (187-236)||(1377470-1377519)
chr6 (187-236)||(1385218-1385267)
chr6 (189-234)||(28011390-28011435)
chr6 (187-234)||(3579598-3579645)
chr6 (187-230)||(18030944-18030987)
chr6 (55-165)||(266242-266354)
chr6 (188-242)||(2840784-2840838)
chr6 (188-236)||(12799057-12799105)
chr6 (5-64)||(2853510-2853568)
chr6 (113-165)||(2853604-2853658)
chr6 (61-156)||(3812820-3812917)
chr6 (179-234)||(5003092-5003147)
chr6 (113-165)||(26601531-26601585)
chr6 (191-233)||(26601727-26601769)
chr6 (113-230)||(2853435-2853552)
chr6 (180-229)||(3813000-3813048)
chr6 (179-244)||(30349612-30349677)
chr6 (180-232)||(10582155-10582206)
[»] chr8 (50 HSPs)
chr8 (5-234)||(20853381-20853610)
chr8 (5-234)||(30539071-30539301)
chr8 (5-165)||(6807254-6807412)
chr8 (1-157)||(45177280-45177443)
chr8 (5-98)||(35213111-35213202)
chr8 (2-98)||(39889850-39889946)
chr8 (56-236)||(41487341-41487522)
chr8 (61-165)||(21486725-21486832)
chr8 (6-165)||(3676201-3676371)
chr8 (180-234)||(17070910-17070964)
chr8 (180-234)||(17577308-17577362)
chr8 (5-154)||(25144024-25144174)
chr8 (5-165)||(29657774-29657932)
chr8 (5-140)||(9762298-9762432)
chr8 (179-232)||(22192307-22192360)
chr8 (179-236)||(37263359-37263416)
chr8 (61-165)||(16982747-16982853)
chr8 (179-231)||(33298589-33298641)
chr8 (5-157)||(14880414-14880566)
chr8 (113-236)||(27545545-27545668)
chr8 (113-234)||(41487203-41487326)
chr8 (81-165)||(37813247-37813334)
chr8 (5-140)||(22846541-22846673)
chr8 (179-234)||(32768505-32768560)
chr8 (179-234)||(37813165-37813220)
chr8 (180-234)||(755906-755960)
chr8 (5-98)||(44101372-44101463)
chr8 (180-237)||(25896990-25897047)
chr8 (190-234)||(521709-521753)
chr8 (179-227)||(14880590-14880638)
chr8 (179-231)||(16982632-16982684)
chr8 (189-233)||(26824098-26824141)
chr8 (61-153)||(29044683-29044778)
chr8 (179-234)||(6807176-6807231)
chr8 (187-234)||(9762463-9762510)
chr8 (179-234)||(23702126-23702181)
chr8 (124-236)||(25144143-25144253)
chr8 (179-234)||(28349563-28349618)
chr8 (189-236)||(29657964-29658011)
chr8 (113-165)||(37939982-37940035)
chr8 (187-234)||(39889775-39889822)
chr8 (189-236)||(45456967-45457014)
chr8 (5-39)||(17070989-17071023)
chr8 (5-39)||(17577249-17577283)
chr8 (180-234)||(35213034-35213088)
chr8 (186-236)||(37940166-37940215)
chr8 (179-236)||(7010924-7010981)
chr8 (54-156)||(27545420-27545524)
chr8 (61-154)||(29790839-29790935)
chr8 (124-165)||(41602553-41602596)
[»] chr2 (59 HSPs)
chr2 (5-234)||(44617814-44618048)
chr2 (1-165)||(8857117-8857282)
chr2 (5-158)||(24472529-24472683)
chr2 (1-137)||(4576622-4576756)
chr2 (5-234)||(39918437-39918673)
chr2 (5-99)||(6510139-6510231)
chr2 (124-238)||(6510200-6510314)
chr2 (116-234)||(14489404-14489521)
chr2 (54-154)||(37431625-37431728)
chr2 (54-165)||(34760918-34761032)
chr2 (5-157)||(15022916-15023070)
chr2 (5-234)||(43028797-43029025)
chr2 (5-159)||(27489509-27489667)
chr2 (71-169)||(25333565-25333666)
chr2 (5-165)||(31827596-31827764)
chr2 (4-85)||(36715383-36715460)
chr2 (5-157)||(6592805-6592965)
chr2 (5-158)||(34679175-34679324)
chr2 (5-231)||(5470410-5470643)
chr2 (61-234)||(14489217-14489391)
chr2 (5-157)||(4925518-4925678)
chr2 (187-236)||(37431801-37431850)
chr2 (113-234)||(16043211-16043336)
chr2 (54-153)||(41196359-41196461)
chr2 (180-234)||(34679347-34679401)
chr2 (190-236)||(34761127-34761173)
chr2 (180-234)||(36176984-36177038)
chr2 (5-165)||(14943618-14943788)
chr2 (179-236)||(43029050-43029106)
chr2 (22-142)||(5362275-5362394)
chr2 (190-242)||(5470325-5470377)
chr2 (5-142)||(18969178-18969312)
chr2 (1-165)||(37803194-37803366)
chr2 (61-153)||(8553680-8553774)
chr2 (187-234)||(18709250-18709297)
chr2 (5-142)||(35718741-35718887)
chr2 (54-168)||(5008417-5008534)
chr2 (180-234)||(19206145-19206199)
chr2 (63-169)||(24306157-24306266)
chr2 (5-85)||(19206223-19206308)
chr2 (113-234)||(31827722-31827842)
chr2 (190-234)||(32969794-32969838)
chr2 (187-234)||(5362178-5362225)
chr2 (179-234)||(15023094-15023149)
chr2 (179-234)||(21358361-21358416)
chr2 (193-236)||(35718925-35718968)
chr2 (180-234)||(14816054-14816108)
chr2 (180-226)||(25333749-25333795)
chr2 (61-115)||(34100862-34100916)
chr2 (115-165)||(25456-25508)
chr2 (115-165)||(21361951-21362003)
chr2 (72-165)||(25411612-25411708)
chr2 (189-234)||(37803398-37803443)
chr2 (187-235)||(2609080-2609128)
chr2 (113-158)||(5470405-5470452)
chr2 (190-226)||(6592999-6593035)
chr2 (180-236)||(12948890-12948946)
chr2 (5-64)||(18224905-18224965)
chr2 (179-231)||(20650376-20650428)
[»] scaffold0248 (2 HSPs)
scaffold0248 (5-234)||(405-640)
scaffold0248 (179-231)||(666-718)
[»] scaffold0015 (1 HSPs)
scaffold0015 (5-158)||(76940-77092)
[»] scaffold0809 (1 HSPs)
scaffold0809 (9-153)||(2839-2991)
[»] scaffold0328 (1 HSPs)
scaffold0328 (5-157)||(9490-9652)
[»] scaffold0250 (1 HSPs)
scaffold0250 (187-242)||(3567-3622)
[»] scaffold0150 (1 HSPs)
scaffold0150 (5-82)||(9633-9706)
[»] scaffold0062 (1 HSPs)
scaffold0062 (124-231)||(46082-46190)
[»] scaffold0011 (1 HSPs)
scaffold0011 (5-142)||(145449-145586)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-115)||(93926-94037)
[»] scaffold1458 (1 HSPs)
scaffold1458 (179-234)||(1474-1529)
[»] scaffold0515 (1 HSPs)
scaffold0515 (179-234)||(3642-3697)
[»] scaffold0417 (2 HSPs)
scaffold0417 (189-236)||(9603-9650)
scaffold0417 (65-144)||(9431-9511)
[»] scaffold0306 (1 HSPs)
scaffold0306 (179-234)||(3642-3697)
[»] scaffold0025 (2 HSPs)
scaffold0025 (179-234)||(19043-19098)
scaffold0025 (113-165)||(19218-19272)
[»] scaffold0735 (1 HSPs)
scaffold0735 (180-234)||(6063-6117)
[»] scaffold0166 (1 HSPs)
scaffold0166 (2-140)||(21754-21891)
[»] scaffold0372 (2 HSPs)
scaffold0372 (61-115)||(246-300)
scaffold0372 (182-234)||(127-179)


Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 39574473 - 39574175
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaat 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||      
T  39574473 cccataagttttgcaactgtggcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacgtcacttatggtgtcacgtcagc 39574374  T
Q  101 gtagacaaagtcaaattggtcttgggggccaaaactgccacatgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaac 200  Q
    ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||    
T  39574373 gtagaccgagtcaaattggtcttgggggccaaaactgccacatgcaaaacttagggggtgattttatag--tttttttcttagggagccaaaatcgcaac 39574276  T
Q  201 ttcgtgaaagttagagggcgaaaactgctattaaacttatttattaaaggcttacttatttacggtaaactatattgnnnnnnnagggagtaatattgtt 300  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||       ||||||||||||||||    
T  39574275 ttcgtgaaagttagagggcgaaaactgctattaagcttatttattaaaggcttacttatttacagtaaactatattgtttttttagggagtaatattgtt 39574176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 36798407 - 36798173
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaaga---aaataacatgtggcacctcacttaaggtgtcacgtcaatg 101  Q
    |||||||||||||||||||||||||||| ||||||   |||||||| |||| ||| |   ||||||||||||||||||||||||  ||| ||||||| ||    
T  36798407 taagttttgcaactgtagcagttttggccccccaaagccaattttttgtaataaaaataaaaataacatgtggcacctcacttagagtgccacgtcagtg 36798308  T
Q  102 tagacaaagtcaaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaa 199  Q
    |||||  |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||         ||||||| |||||||| ||||    
T  36798307 tagaccgagtcaaattggtcttgggggccaaaactgccacagatgcaaaacttagggggtggttttgtagtttttttttcttagggggccaaaattgcaa 36798208  T
Q  200 cttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||| |  |||||||  || | ||||||||||||||    
T  36798207 ctttggaaaagttaagggtctaaaactgctattaa 36798173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 19340843 - 19340997
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggt-aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgta 103  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||| |||||| ||||||||| ||||||||||| ||| |||| |||||||| ||     
T  19340843 taagttttgcaactgtagcagttttggccccccaagatcaatttttggtaaaaaaaaaaaataacacgtggcacctcatttagggtgccacgtcaacgtt 19340942  T
Q  104 gacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagg 155  Q
    |||  |||| |||||||  |||||| | |||||||||||  ||||||||||||||    
T  19340943 gaccgagtcaaaattggctttggggactaaaactgccacagatgcaaaacttagg 19340997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 2974864 - 2974704
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    ||||||||||| |||||||||||||||| ||| ||   |||||||||||||||   ||||| ||||||||||||||||||| |||| |||||||  ||||    
T  2974864 taagttttgcacctgtagcagttttggccccctaaggccaatttttggtaaaa---aaaattacatgtggcacctcacttagggtgccacgtcagcgtag 2974768  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    ||  |||| |||||||  ||||||||||||||||||||  ||||||||||||||||| ||||||    
T  2974767 accgagtcaaaattggcattgggggccaaaactgccacagatgcaaaacttagggggcggtttt 2974704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 12406124 - 12406283
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    ||||||||||||||||| |||||||||| ||||||   |||||||||||||||||   ||||||| ||||||||||||||| |||| |||||||  ||||    
T  12406124 taagttttgcaactgta-cagttttggccccccaaggccaatttttggtaaaaaa---aataacacgtggcacctcacttagggtgccacgtcagcgtag 12406219  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    ||  |||| ||||||| |||||||||||||||||||||  ||| ||||||||||||| ||||||    
T  12406220 actgagtcaaaattggccttgggggccaaaactgccacagatgtaaaacttagggggcggtttt 12406283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 6130337 - 6130470
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaa-agaaaataacatgtggcacctcacttaaggtgtcacgtcaatgta 103  Q
    |||||||||||||||||||||||||||| ||||||   |||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||  ||    
T  6130337 taagttttgcaactgtagcagttttggccccccaaggccaatttttggtaaaaataaaaaataacatgtggcacctcacttagggtgtcacgtcaacata 6130436  T
Q  104 gacaaagtcaaattggtcttgggggccaaaactg 137  Q
    |||  ||||||| | | | | |||||||||||||    
T  6130437 gaccgagtcaaaattgaccttggggccaaaactg 6130470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 32391801 - 32391962
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||||| ||||||   |||||||||||| |||  ||||||||||||||||||||||||| |||| |||||||  ||||    
T  32391801 taagttttgcaactgtagcagttttggccccccaaggccaatttttggtagaaa--aaaataacatgtggcacctcacttagggtgccacgtcagcgtag 32391898  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactg--ccacatgcaaaacttagggggtggtttt 165  Q
    ||  |||| |||||||||||||  | ||||||||   ||||||||||||||| |||| ||||||    
T  32391899 accgagtcaaaattggtcttggatgtcaaaactgtcacacatgcaaaacttaaggggcggtttt 32391962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 3999167 - 3999317
Alignment:
Q  4 ataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaag----------aaaataacatgtggcacctcacttaaggtgtca 93  Q
    ||||||||||||||||||||||||||||| || |||   |||||||||||||||||           |||||||||||||||||||||||||||||| ||    
T  3999167 ataagttttgcaactgtagcagttttggcccctcaaggccaatttttggtaaaaaaataaaaacaaaaaaataacatgtggcacctcacttaaggtgcca 3999266  T
Q  94 cgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccacat 143  Q
    |||||  |||||| ||||| ||||||| |||||||||||||||||||||||    
T  3999267 cgtcagcgtagaccaagtcaaaattggccttgggggccaaaactgccacat 3999317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 234
Target Start/End: Original strand, 37897800 - 37898028
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||| |||||| |||||||| ||| || | |||||||| |||||||  |||| |||||||||| ||||||||||||||  ||||||   |||    
T  37897800 taagttttgcaattgtagctgttttggcccccgaagaccaatttttagtaaaaa--aaaaaaacatgtggcgcctcacttaaggtgctacgtcagcatag 37897897  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaact 201  Q
    ||  |||| ||||||||||||| |||||||||||||||  |||||||||||| |||| |||||| |||         ||||||| |||||||||||||||    
T  37897898 accgagtcaaaattggtcttggaggccaaaactgccacatatgcaaaactta-ggggcggttttgtag-ttttttttcttagggggccaaaatcgcaact 37897995  T
Q  202 tcgtgaaagttagagggcgaaaactgctattaa 234  Q
    | |  |||||||| |||| ||||||||||||||    
T  37897996 ttgaaaaagttagggggctaaaactgctattaa 37898028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 234
Target Start/End: Original strand, 27904620 - 27904794
Alignment:
Q  62 aaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttaggggg 158  Q
    |||||||| ||||||||||||||| |||| |||||||  ||||||  |||| |||||||||||||||| |||||||||||||  ||||||||||||||||    
T  27904620 aaataacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggtcttgggggacaaaactgccacaagtgcaaaacttaggggg 27904719  T
Q  159 tggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
     |||||| |||         |||| || |||||||||||||||| |  ||||||||||||| ||||||||||||||    
T  27904720 cggttttgtag-ttttttttcttacggggccaaaatcgcaactttgaaaaagttagagggctaaaactgctattaa 27904794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 9853016 - 9852864
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||| | |||||   ||||||| ||||||||||||||| |||| |||||||  ||||    
T  9853016 taagttttgcaactgtatcagttttggc-ccccaaagtcaatttttgattaaaaa---aataacacgtggcacctcacttagggtgccacgtcagcgtag 9852921  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttaggggg 158  Q
    |  ||||| ||||||| |||||| ||||||||||||||  |||||||||||||||||    
T  9852920 atcaagtcaaaattggccttgggagccaaaactgccacagatgcaaaacttaggggg 9852864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 31080711 - 31080547
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaaga--aaataacatgtggcacctcacttaaggtgtcacgtcaatgt 102  Q
    |||||||||||||||||||||||||| | ||  ||   ||||||||||||||||| |  |||||||| ||||||||||||||| |||| |||||||   |    
T  31080711 taagttttgcaactgtagcagttttgcctcct-aaggccaatttttggtaaaaaaaataaaataacacgtggcacctcacttagggtgccacgtcagcat 31080613  T
Q  103 agacaaag-tcaaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    ||||  || | ||||||| |||||||||||||||||||||  ||||||||||||||||||||||||    
T  31080612 agaccgagttaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggtggtttt 31080547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 234
Target Start/End: Original strand, 40276101 - 40276341
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaa--------agaaaataacatgtggcacctcacttaaggtgtcacgt 96  Q
    |||||||||||||||||||||||||||| ||||||   ||||||||||||||||        | |||| |||||||||||||||||||| ||||||||||    
T  40276101 taagttttgcaactgtagcagttttggccccccaaggccaatttttggtaaaaaaaattattaaaaaaaaacatgtggcacctcacttagggtgtcacgt 40276200  T
Q  97 caatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaa 193  Q
    ||  ||||||   ||| ||||| | |||||||| ||||| ||||||  ||||||||||||||||  |||||| |||         ||||||| |  ||||    
T  40276201 cagcgtagaccgggtcaaaattagccttgggggtcaaaattgccacatatgcaaaacttaggggacggttttgtagtttttttttcttagggggttaaaa 40276300  T
Q  194 tcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| || | ||||||||| |||  ||||||||||||||    
T  40276301 tcgcaaatttgggaaagttagggggataaaactgctattaa 40276341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 143
Target Start/End: Complemental strand, 22300843 - 22300695
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataa---------catgtggcacctcacttaaggtgtcacg 95  Q
    |||||||||||||||||||||||||||| | ||||   ||||||||||||||||| |||||||         |||||||||||||||||| |||| ||||    
T  22300843 taagttttgcaactgtagcagttttggccctccaaggccaatttttggtaaaaaataaaataaaaaaaataacatgtggcacctcacttagggtgccacg 22300744  T
Q  96 tcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccacat 143  Q
    |||| ||||||  |||| |||||||||||||  | ||||||||||||||    
T  22300743 tcaacgtagaccgagtcaaaattggtcttggaagtcaaaactgccacat 22300695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 21066571 - 21066471
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||||| ||||||   ||||||||||||||||  ||||||||| ||||||||||||||| |||| ||| |||  ||||    
T  21066571 taagttttgcaactgtagcagttttggccccccaaggccaatttttggtaaaaa--aaaataacacgtggcacctcacttagggtgccacatcagcgtag 21066474  T
Q  105 aca 107  Q
    |||    
T  21066473 aca 21066471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 234
Target Start/End: Original strand, 3333774 - 3334012
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaa-------aaagaaaataacatgtggcacctcacttaaggtgtcacgtc 97  Q
    |||||||||||| ||||||||||||||| ||||||   ||||||||||||||       ||| || ||||||  |||||||||||||| |||| ||||||    
T  3333774 taagttttgcaaatgtagcagttttggccccccaaggccaatttttggtaaaaaaaaataaaaaatataacacatggcacctcacttagggtgccacgtc 3333873  T
Q  98 aatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaat 194  Q
    |  ||||||  |||| ||||||  |||||||||||||||||||||  |||||||||||| || | |||||| |||         ||||||| ||||||||    
T  3333874 agcgtagaccgagtcaaaattgaccttgggggccaaaactgccacatatgcaaaacttatggagcggttttgtag-tttttcttcttagggggccaaaat 3333972  T
Q  195 cgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||| |  |||||||| |||| |||||| |||||||    
T  3333973 cgcaactttggaaaagttagggggctaaaactactattaa 3334012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 28446235 - 28446087
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||   |||||||| ||| |||||||| || ||||||| ||||  |||     
T  28446235 taagttttgcaactgtagcagttttggc-ccccaagatcaatttttggtaaaaa--taaataacacgtgacacctcacgtagggtgtcaggtcagcgtat 28446139  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaactta 153  Q
    ||  |||| ||||||| ||| ||||||||| ||| |||  ||||||||||||    
T  28446138 accgagtcaaaattggccttaggggccaaagctgtcacaaatgcaaaactta 28446087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 18403223 - 18403057
Alignment:
Q  5 taagttttgcaactgtagcagttt-tggcaccccaatatcaatttttggtaaaaaagaaaa--taacatgtggcacctcacttaaggtgtcacgtcaatg 101  Q
    ||||||||||||| |||| ||||| |||  ||||||   ||||||||||||||||| ||||  || || ||| ||||||||||| |||| |||||||| |    
T  18403223 taagttttgcaaccgtagaagtttctggtcccccaaggccaatttttggtaaaaaaaaaaaaatagcacgtgacacctcacttagggtgccacgtcaacg 18403124  T
Q  102 tagacaaagtc-aaattggtcttgggggccaaaactgcc--acatgcaaaacttagggggtggtttt 165  Q
    |||||  |||| |||||||||||||||| ||||||||||  | ||||||||||||||| ||| ||||    
T  18403123 tagactgagtcaaaattggtcttgggggtcaaaactgccagagatgcaaaacttagggagtgatttt 18403057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 3999144 - 3999087
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||    
T  3999144 cttagggggtcaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaaac 3999087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 25364082 - 25364138
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  25364082 ttagggggccaaaattgcaacttcgtgaaagttagagggtgaaaactgctattaaac 25364138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 165
Target Start/End: Complemental strand, 25910901 - 25910794
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggg 157  Q
    ||||||||||||| ||||||||||| |||| |||||||  ||||||  |||| ||||||  ||||||||||||||||||||||  ||||||| |||| ||    
T  25910901 aaaataacatgtgacacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgggggccaaaactgccacaggtgcaaaatttagagg 25910802  T
Q  158 gtggtttt 165  Q
    ||||||||    
T  25910801 gtggtttt 25910794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 245
Target Start/End: Complemental strand, 32391832 - 32391711
Alignment:
Q  124 gggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagagggcga 221  Q
    ||||||||||||||| |||  |||||||||||||||||| |||| |||         |||| || ||||||||| |||||||||||||||||  ||||||    
T  32391832 gggggccaaaactgctacagttgcaaaacttagggggtgattttgtagttttttt--cttaaggggccaaaatcacaacttcgtgaaagttaaggggcga 32391735  T
Q  222 aaactgctattaaacttatttatt 245  Q
    ||||||||||||| ||||||||||    
T  32391734 aaactgctattaagcttatttatt 32391711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 2974833 - 2974945
Alignment:
Q  124 gggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagagggcga 221  Q
    ||||||||||||||| |||  |||||||||||||||| |||| | |||         ||| ||| |||||||||||||||||||||||||||| |||| |    
T  2974833 gggggccaaaactgctacaggtgcaaaacttagggggcggttctgtagttttttttccttggggggccaaaatcgcaacttcgtgaaagttagggggcaa 2974932  T
Q  222 aaactgctattaa 234  Q
    |||||||||||||    
T  2974933 aaactgctattaa 2974945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 20629820 - 20629987
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaaga-----aaataacatgtggcacctcacttaaggtgtcacgtcaa 99  Q
    ||||||||| ||||||| |||||||||  ||||||   |||||||||||| |||| |     |||||||| ||||||||||||||| |||| |||||||     
T  20629820 taagttttgaaactgtaacagttttggt-ccccaaggccaatttttggtagaaaaaacaaaaaaataacacgtggcacctcacttagggtgccacgtcag 20629918  T
Q  100 tgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
     |||||   |||| ||||||||| ||| |||||||||| ||||  ||||||||||||||||| ||||||    
T  20629919 cgtagatcgagtcaaaattggtcctggaggccaaaacttccacaaatgcaaaacttagggggcggtttt 20629987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 56 - 157
Target Start/End: Complemental strand, 26702618 - 26702514
Alignment:
Q  56 aaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaactt 152  Q
    |||| ||||||||| ||||||||||||||| |||| |||||||   |||||  | || |||||||||||||||||||||||||||||  |||||||||||    
T  26702618 aaaataaaataacacgtggcacctcacttagggtgccacgtcaggatagaccgaatcaaaattggtcttgggggccaaaactgccacaaatgcaaaactt 26702519  T
Q  153 agggg 157  Q
     ||||    
T  26702518 ggggg 26702514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 56 - 157
Target Start/End: Complemental strand, 26972351 - 26972247
Alignment:
Q  56 aaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaactt 152  Q
    |||| ||||||||| ||||||||||||||| |||| |||||||   |||||  | || |||||||||||||||||||||||||||||  |||||||||||    
T  26972351 aaaataaaataacacgtggcacctcacttagggtgccacgtcaggatagaccgaatcaaaattggtcttgggggccaaaactgccacaaatgcaaaactt 26972252  T
Q  153 agggg 157  Q
     ||||    
T  26972251 ggggg 26972247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 165
Target Start/End: Complemental strand, 16132922 - 16132815
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggg 157  Q
    |||||||||  |||||||||||||| | || ||| |||  |||||||||||| ||||||| ||||||| |||||||||||| |  |||||||||||||||    
T  16132922 aaaataacacatggcacctcacttaggatgccacatcagcgtagacaaagtcaaaattggccttggggaccaaaactgccataggtgcaaaacttagggg 16132823  T
Q  158 gtggtttt 165  Q
    | ||||||    
T  16132822 gcggtttt 16132815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 20512377 - 20512274
Alignment:
Q  58 aagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttag 154  Q
    |||||||||||| ||||||||||||||| |||| || || |  ||||||  |||| |||||||||||||||| ||||||| |||||  ||||||||||||    
T  20512377 aagaaaataacacgtggcacctcacttagggtgccatgttagcgtagaccgagtcaaaattggtcttgggggtcaaaactaccacaggtgcaaaacttag 20512278  T
Q  155 gggg 158  Q
    ||||    
T  20512277 gggg 20512274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 35166491 - 35166604
Alignment:
Q  122 ttgggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagtta-gaggg 218  Q
    ||||||||||||||||| |||  |||||||||||||||||| |||| |||         |||||||  |||||||||||||||||||||||||| | |||    
T  35166491 ttgggggccaaaactgctacagctgcaaaacttagggggtgattttgtagttttttt--cttaggggaccaaaatcgcaacttcgtgaaagttagggggg 35166588  T
Q  219 cgaaaactgctattaa 234  Q
    ||||||||||||||||    
T  35166589 cgaaaactgctattaa 35166604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 3333740 - 3333694
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaa 235  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  3333740 caaaatcgcaacttcatgaaagttagggggcgaaaactgctattaaa 3333694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 34320083 - 34320183
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    |||||||||||| ||||| |||| | |||| ||||||| ||||||| ||||| ||||||   ||||||||||||||||||||  ||| ||||||||||||    
T  34320083 aaaataacatgtagcaccccactaagggtgccacgtcagtgtagaccaagtcaaaattgactttgggggccaaaactgccacaaatgtaaaacttagggg 34320182  T
Q  158 g 158  Q
    |    
T  34320183 g 34320183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 25910992 - 25911036
Alignment:
Q  190 aaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| |||||||||||||||||| |||||||||||||||||||    
T  25910992 aaaatctcaacttcgtgaaagttagggggcgaaaactgctattaa 25911036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 12406099 - 12406044
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| |||||||||||||||| | ||||||||| |||| ||||||||||||||    
T  12406099 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 12406044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 20512463 - 20512510
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||    
T  20512463 gccaaaatcgcaacttcgtgaaagttaagaggcgaaaactgctattaa 20512510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 236
Target Start/End: Complemental strand, 20629862 - 20629737
Alignment:
Q  113 aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaag 210  Q
    ||||||| ||||||| |||||||||  |||  | ||||||||||||||| ||||| |||         ||||||| |  ||||||||||||| |||||||    
T  20629862 aaattggccttggggaccaaaactgttacagtttcaaaacttagggggttgttttgtagtttttttttcttagggggttaaaatcgcaactttgtgaaag 20629763  T
Q  211 ttagagggcgaaaactgctattaaac 236  Q
    |||  |||||||||||||||||||||    
T  20629762 ttaaggggcgaaaactgctattaaac 20629737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 43098076 - 43098029
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||||||||||||| |||||||| || ||||||||||||||||||    
T  43098076 caaaatcgcaacttcgtaaaagttaggggacgaaaactgctattaaac 43098029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 34320017 - 34319964
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctatta 233  Q
    ||||||| |||||||||||||||||  ||||||||| ||||||||||||||||||    
T  34320017 cttagggggccaaaatcgcaacttcaagaaagttag-gggcgaaaactgctatta 34319964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 586678 - 586723
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||||    
T  586678 caaaatcgcaacttcatgaaagttagaggacgaaaattgctattaa 586723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 24779508 - 24779371
Alignment:
Q  2 ccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatg 101  Q
    ||||||||||| ||||||||  ||||||||| ||  |||   |||||||||||||||  ||||||||| ||| || |||||||  |||| |||||||  |    
T  24779508 ccataagttttacaactgtattagttttggctccttaatgctaatttttggtaaaaa--aaaataacacgtgacaactcacttggggtgccacgtcagcg 24779411  T
Q  102 tagacaaagtc-aaattggtcttgggggccaaaactgcca 140  Q
    |||||  |||| |||||||| |||||  ||||||||||||    
T  24779410 tagaccgagtcaaaattggttttgggaaccaaaactgcca 24779371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 18403246 - 18403300
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| ||||||||||||||| | ||||||||||  ||||||||||||||||||    
T  18403246 cttagggggccaaaatcgcaact-catgaaagttaggtggcgaaaactgctattaa 18403300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 165
Target Start/End: Original strand, 30604216 - 30604330
Alignment:
Q  54 aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccaca--tgcaaaac 150  Q
    |||||| |||||||||   ||||||||||||| |||| |||||||  ||||||| ||||||| |||| ||   ||  |||||||||||||  ||||||||    
T  30604216 aaaaaaaaaaataacactgggcacctcacttagggtgccacgtcagcgtagacagagtcaaaattggcctacaggtgcaaaactgccacaggtgcaaaac 30604315  T
Q  151 ttagggggtggtttt 165  Q
    |||||||| ||||||    
T  30604316 ttagggggcggtttt 30604330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 158
Target Start/End: Complemental strand, 35166471 - 35166373
Alignment:
Q  63 aataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaattggtc-ttgggggccaaaactgccacatg--caaaacttaggggg 158  Q
    ||||||||||||||||||||||| ||||||| ||||  ||||||  ||||||| | | | |||  ||||||||| ||||||||  ||||||||||||||    
T  35166471 aataacatgtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattgaaggccaaaaccgccacatgtgcaaaacttaggggg 35166373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 36798432 - 36798487
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||  ||||||||||||||| | ||||||||| |||| ||||||||||||||    
T  36798432 cttaggggaccaaaatcgcaactttgagaaagttagggggctaaaactgctattaa 36798487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 6464332 - 6464386
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| ||||||||||||||||| |||||  ||| |||| ||||||||||||||    
T  6464332 ttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaa 6464386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 30603695 - 30603729
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaa 39  Q
    |||||||||||||||||||||||||||| ||||||    
T  30603695 taagttttgcaactgtagcagttttggccccccaa 30603729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 43098163 - 43098260
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttagg 155  Q
    ||||||||| | ||||||||||||| |||| |||||||  ||||||  |||| |||||| | | ||||||||||||||| |||  |||||||||||||    
T  43098163 aaaataacacgcggcacctcacttagggtgccacgtcagcgtagactgagtcaaaattgatatcgggggccaaaactgctacaggtgcaaaacttagg 43098260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 35877545 - 35877590
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| ||||| ||||||||||||| ||| |||||||||||||||    
T  35877545 caaaattgcaacctcgtgaaagttagggggtgaaaactgctattaa 35877590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 40133143 - 40133192
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||||||||||||| | ||||||||| |||| |||| |||||||||||    
T  40133143 gccaaaatcgcaactttgggaaagttagggggctaaaattgctattaaac 40133192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 31157031 - 31157075
Alignment:
Q  54 aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    |||||| |||| |||| ||||||||||||||| ||||||||||||    
T  31157031 aaaaaaaaaaaaaacaagtggcacctcacttagggtgtcacgtca 31157075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 43098258 - 43098215
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttt 49  Q
    ||||||||||| |||||||||||||||| |||| |||||||||||    
T  43098258 taagttttgcacctgtagcagttttggc-ccccgatatcaatttt 43098215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 4e-41; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 35250351 - 35250122
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||| |||||    
T  35250351 taagttttgcaactgtagcagttttggccccccaagaccaatttttggtaaaaaa-aaaataacacgtggcacctcacttaaggtgccacgtcagtgtag 35250253  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgcc--acatgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaact 201  Q
    ||  |||| ||||||| ||||||| ||||||||| |  | ||||||||||||| ||| ||||||||||         |||| ||  ||||||||||||||    
T  35250252 accgagtcaaaattggccttggggtccaaaactgtcaaagatgcaaaacttagagggcggttttatag--tttttttcttaagggaccaaaatcgcaact 35250155  T
Q  202 tcgtgaaagttagagggcgaaaactgctattaa 234  Q
    | |  ||||||||||||| |||||| |||||||    
T  35250154 ttggaaaagttagagggctaaaactactattaa 35250122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 15107075 - 15107235
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||| ||||||||||||| ||||||   |||||||||||||||||  |||||||||||||||||||||||| |||| ||| ||| |||||    
T  15107075 taagttttgcaactatagcagttttggc-ccccaagcccaatttttggtaaaaaa--aaataacatgtggcacctcacttagggtgccacatcagtgtag 15107171  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    ||  |||| |||||||  |||| |||||||||||||||  ||||||||||||||| | ||||||    
T  15107172 accgagtcaaaattggcattggaggccaaaactgccacaaatgcaaaacttagggagcggtttt 15107235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 239
Target Start/End: Original strand, 18186522 - 18186768
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacat---------gtggcacctcacttaaggtgtcacg 95  Q
    |||||||||||||| |||||||||||||  | ||| |||||||||| ||| |||| ||||||| ||         ||||||||||||||| |||| ||||    
T  18186522 taagttttgcaactatagcagttttggcctctcaagatcaattttttgtataaaaaaaaataaaataaataacccgtggcacctcacttagggtgccacg 18186621  T
Q  96 tcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaa 192  Q
    |||| ||||||  |||| ||||||| ||||||| |||||||||||||  |||||||||||| |||  ||||||||||         ||||||| | ||||    
T  18186622 tcaacgtagactgagtcaaaattggccttggggaccaaaactgccacagatgcaaaacttaagggacggttttatagtttttttttcttagggggtcaaa 18186721  T
Q  193 atcgcaacttcgtgaaagttagagggcgaaaactgctattaaactta 239  Q
    |||| ||||| |  |||||||| |||| |||||||||||||||||||    
T  18186722 atcgtaactttggaaaagttagggggctaaaactgctattaaactta 18186768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 41243874 - 41243721
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||| ||||||||| || ||||  ||||||||||||||||| |||||||||  || ||||||||||| |||| |||||||| ||||    
T  41243874 taagttttgcaactgtagtagttttggc-cctcaatgccaatttttggtaaaaaa-aaaataacacatgacacctcacttagggtgccacgtcaacgtag 41243777  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    ||  |||| ||||||| ||||||| | |||||||||||  ||||||||||||||||    
T  41243776 accgagtcaaaattggccttggggacaaaaactgccacaaatgcaaaacttagggg 41243721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 18504472 - 18504314
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||| |||||||||||||||  ||||||  |||||||||||||     ||||||||| |||| |||||||||| |||| |||||||  ||||    
T  18504472 taagttttgcaattgtagcagttttggcctcccaatgccaatttttggtaa-----aaaataacacgtggaacctcacttagggtgccacgtcagcgtag 18504378  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    ||  |||| ||||||| ||| | |||||||||||||||  ||||||||||||||||| ||||||    
T  18504377 actgagtcaaaattggccttagaggccaaaactgccacatatgcaaaacttagggggcggtttt 18504314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 21505697 - 21505833
Alignment:
Q  5 taagttttgcaactgtagcagtttt-ggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgta 103  Q
    ||||||||| |||| ||||| |||| ||| ||||||   ||||||||||||||||| || |||||| ||| ||||||||||| ||||||||||||| |||    
T  21505697 taagttttgtaactatagcattttttggccccccaaggccaatttttggtaaaaaaaaatataacacgtgacacctcacttagggtgtcacgtcaacgta 21505796  T
Q  104 gacaaagtcaaattggtcttgggggccaaaactgcca 140  Q
    |||  ||||||| ||| |||||| |||||||||||||    
T  21505797 gactgagtcaaaatggccttgggagccaaaactgcca 21505833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 36580356 - 36580518
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||||| | ||||   ||||||||||||||| | ||| ||||| ||| ||||||| ||| |||| |||||||  ||||    
T  36580356 taagttttgcaactgtagcagttttggc-caccaaggccaatttttggtaaaataaaaattaacacgtgacacctcatttagggtgccacgtcagcgtag 36580454  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    ||  |||| ||||||   ||||||||||||||||||||  ||||||||||||||||| ||||||    
T  36580455 accgagtcaaaattgactttgggggccaaaactgccacaaatgcaaaacttagggggcggtttt 36580518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 28350241 - 28350119
Alignment:
Q  113 aaattggtcttgggggccaaaactgccacatg--caaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaag 210  Q
    |||||||||||||||||||||||||||||| |  |||||||||||||| |||||| |||         ||||||| |||||||||| |||||||||||||    
T  28350241 aaattggtcttgggggccaaaactgccacaggggcaaaacttagggggcggttttgtagtttttttt-cttagggggccaaaatcgtaacttcgtgaaag 28350143  T
Q  211 ttagagggcgaaaactgctattaa 234  Q
    |||| |||| ||||||||||||||    
T  28350142 ttagggggctaaaactgctattaa 28350119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 19645034 - 19644902
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||||| | ||||   ||||||||||||||||| || | || ||||||||||||||||| |||| |||||||  ||||    
T  19645034 taagttttgcaactgtagcagttttggc-ctccaaagccaatttttggtaaaaaa-aataaaaaatgtggcacctcacttacggtgccacgtcagcgtag 19644937  T
Q  105 acaaag-tcaaattggtcttgggggccaaaactgc 138  Q
    ||   | | ||||||||||||| ||||||||||||    
T  19644936 actgggttaaaattggtcttggaggccaaaactgc 19644902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 28472610 - 28472470
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||||| ||||||           || |||||| |||| |||||||||||||||| | | ||||||||||||| ||||    
T  28472610 taagttttgcaactgtagcagttttggccccccaa-----------ggcaaaaaaaaaaaaaacatgtggcacctcattcagggtgtcacgtcaacgtag 28472522  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccacat--gcaaaactta 153  Q
    ||  | || ||||||||||||||||| |||||||||||||  ||||||||||    
T  28472521 accgaatcaaaattggtcttgggggcgaaaactgccacataagcaaaactta 28472470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 15348188 - 15348029
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggta-----aaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaa 99  Q
    ||||||||||||| |||||||||||||| ||||||   ||||||||||||     ||||||||| |||||||||| |||||||||| |||| ||| |||     
T  15348188 taagttttgcaaccgtagcagttttggc-ccccaaggccaatttttggtaaaaataaaaagaaattaacatgtggaacctcacttagggtgccacatcag 15348090  T
Q  100 tgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
     ||||||  |||| ||||||  ||||||||||| |||| ||||  ||||||||||||||||    
T  15348089 cgtagaccgagtcaaaattgaccttgggggccataacttccacagatgcaaaacttagggg 15348029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 36903502 - 36903341
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaa-------taacatgtggcacctcacttaaggtgtcacgtc 97  Q
    ||||||||||||||||||||||||| || ||||||   ||||||| ||||||||| ||||       ||||||||||||||||||||| |||| || |||    
T  36903502 taagttttgcaactgtagcagttttagc-ccccaaggccaattttcggtaaaaaataaaaataaaaataacatgtggcacctcacttagggtgccatgtc 36903404  T
Q  98 aatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    |  ||||||  |||| ||||||| |||| ||||||||||||||||  ||| ||||||||||||    
T  36903403 agcgtagaccgagtcaaaattggccttgagggccaaaactgccacagatggaaaacttagggg 36903341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 44312827 - 44312975
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    ||||||||||||||||| ||||||||  ||||||| | ||||||||||| |||||  |||||||||||||||||||||||| |||| || ||||   |||    
T  44312827 taagttttgcaactgtaacagttttg--accccaagaccaatttttggttaaaaa--aaataacatgtggcacctcacttagggtgacatgtcagcatag 44312922  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagg 155  Q
    ||  |||| ||||||||||| |  |||||||||| |||  ||||||||||||||    
T  44312923 accgagtcaaaattggtctt-gaagccaaaactgtcacaaatgcaaaacttagg 44312975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 9500090 - 9500213
Alignment:
Q  113 aaattggtcttgggggccaaaactgccacatg--caaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaag 210  Q
    ||||||| |||||||||||||||| ||||| |  |||||||||||||| |||||| |||         |||||||  |||||||||||||||| |||||     
T  9500090 aaattggccttgggggccaaaactaccacaaggtcaaaacttagggggcggttttgtagtttttttttcttaggggaccaaaatcgcaacttcttgaaac 9500189  T
Q  211 ttagagggcgaaaactgctattaa 234  Q
    |||| |||| ||||||||||||||    
T  9500190 ttagggggctaaaactgctattaa 9500213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 28785840 - 28785991
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||| | ||||||||| | | ||   |||||||||||||     ||||||||| ||||||||||||||| ||||||||||||  ||||    
T  28785840 taagttttgcaactgttgtagttttggcccacaaaggccaatttttggtaa-----aaaataacacgtggcacctcacttagggtgtcacgtcagcgtag 28785934  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgcc--acatgcaaaacttaggggg 158  Q
    ||  |||| ||||| | |||||||| ||||||||||  | |||||||||||| ||||    
T  28785935 accgagtcaaaattagccttgggggtcaaaactgccataaatgcaaaacttatgggg 28785991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 4049977 - 4050032
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| ||||||||| |||||||||||||||||  |||||||||||||||||||    
T  4049977 cttagggggccaaaatcacaacttcgtgaaagttaaggggcgaaaactgctattaa 4050032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 20185148 - 20184919
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||||| ||||||    |||||||| |||||||  |||||||| | | ||||||||||| ||||  || |||  ||||    
T  20185148 taagttttgcaactgtagcagttttggccccccaaggctaatttttgataaaaaa--aaataacacgcgacacctcactta-ggtgctacatcagcgtag 20185052  T
Q  105 acaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaact 201  Q
    ||  ||||||| |||  ||||||||||||||||| |||  |||||||||||| | || |||||| |||         ||||||| || ||||||||||||    
T  20185051 accgagtcaaaattgaccttgggggccaaaactggcacatatgcaaaacttaagaggcggttttgtagtttttttttcttagggggctaaaatcgcaact 20184952  T
Q  202 tcgtgaaagttagagggcgaaaactgctattaa 234  Q
    | |  |||||||| | || ||||||| ||||||    
T  20184951 ttggaaaagttagggagctaaaactgttattaa 20184919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 21748082 - 21748125
Alignment:
Q  191 aaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  21748082 aaatcgcaacttcgtgaaagttagggggcgaaaactgctattaa 21748125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 23826250 - 23826115
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||||  ||| || ||||| ||||||||||||  ||||| |||  || ||| ||| ||| || |||||||||  ||||    
T  23826250 taagttttgcaactgtagcagttttgg-tccctaagatcaagttttggtaaaaa--aaaatgacacatgacacttcaattagggcgtcacgtcagcgtag 23826154  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccaca 142  Q
    ||  | || |||||| |||||||||||||||||||||||    
T  23826153 accgaatcaaaattgatcttgggggccaaaactgccaca 23826115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 14247408 - 14247297
Alignment:
Q  123 tgggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagagggcg 220  Q
    ||||||||||||||||||||  ||||||||||| |||| |||||| |||         ||||||  ||||||||| ||||||||||||||||||  ||||    
T  14247408 tgggggccaaaactgccacaattgcaaaacttatggggcggttttgtagttttttt--cttaggcggccaaaatcacaacttcgtgaaagttaggtggcg 14247311  T
Q  221 aaaactgctattaa 234  Q
    ||||||||||||||    
T  14247310 aaaactgctattaa 14247297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 20185172 - 20185226
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| | |||||||||||||||||||||||||| ||||||||||| |||||||    
T  20185172 ttagggggtcaaaatcgcaacttcgtgaaagttagggggcgaaaactactattaa 20185226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 23746120 - 23745970
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    ||||||||||||||||||||||||||||| || ||   |||||| || |||||   ||||||||||||| ||||||||||| |||  |||||||  ||||    
T  23746120 taagttttgcaactgtagcagttttggca-cctaaggccaatttatgttaaaa---aaaataacatgtgacacctcacttacggtaccacgtcagcgtag 23746025  T
Q  105 acaaagtcaaattggtcttgggggccaaaactgccac--atgcaaaacttaggggg 158  Q
    ||  ||||||| ||| ||| |||||||| |||| |||  ||||||||||| |||||    
T  23746024 accgagtcaaagtggcctt-ggggccaacactgtcacaaatgcaaaactttggggg 23745970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 15348146 - 15348269
Alignment:
Q  113 aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaag 210  Q
    ||||||| |||||||||||||||||| ||   |||||||||||||||| |||||| |||         ||||| |   ||||||||||||||||||||||    
T  15348146 aaattggccttgggggccaaaactgctacggttgcaaaacttagggggcggttttgtagtttttttttcttagaggatcaaaatcgcaacttcgtgaaag 15348245  T
Q  211 ttagagggcgaaaactgctattaa 234  Q
    |||| ||| ||| |||||||||||    
T  15348246 ttagggggtgaatactgctattaa 15348269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 19645065 - 19645114
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  19645065 gccaaaatcgcaacttcgtgaaagttaaggggcgaaaattgctattaaac 19645114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 154
Target Start/End: Complemental strand, 5172755 - 5172593
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaa----------aagaaaataacatgtggcacctcacttaaggtgtcac 94  Q
    |||||||||||||||||||||||||||  ||||||   |||||||||||||||          || |||||||||  |||||||||||||| ||||  |     
T  5172755 taagttttgcaactgtagcagttttggtcccccaaggccaatttttggtaaaataaaaaaaataaaaaaataacacatggcacctcacttagggtgcaat 5172656  T
Q  95 gtcaatgtagacaaagtca-aattggtcttgggggccaaaactgccac--atgcaaaacttag 154  Q
    ||||| ||||||  ||||| ||||||| ||||| || |||||||||||  |||||||||||||    
T  5172655 gtcaacgtagaccgagtcataattggttttgggagctaaaactgccacagatgcaaaacttag 5172593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 153
Target Start/End: Complemental strand, 8074104 - 8073957
Alignment:
Q  6 aagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtaga 105  Q
    ||||||||||||||||||||||||||| | ||||   ||||||| | || |||| ||||  ||| |||||||||||||||  ||| |||||||  | |||    
T  8074104 aagttttgcaactgtagcagttttggccctccaacgccaatttt-gatataaaaaaaaa--acacgtggcacctcacttagagtgccacgtcagcgaaga 8074008  T
Q  106 caaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaactta 153  Q
    |  | || ||||||| |||||||||||||||||||||  ||||||||||||    
T  8074007 ccgaatcaaaattggccttgggggccaaaactgccacatatgcaaaactta 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 8074142 - 8074186
Alignment:
Q  190 aaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||    
T  8074142 aaaatcgtaacttcgtgaaagttagggggcgaaaactgctattaa 8074186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 165
Target Start/End: Complemental strand, 15029238 - 15029132
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccaca--tgcaaaacttagggg 157  Q
    ||||||||| ||||||  ||||||||||||||||||||   | ||| | |||||| |||  ||||||||||||||||||||||  |||||||||||||||    
T  15029238 aaaataacacgtggcatttcacttaaggtgtcacgtcagcatggacga-gtcaaaattgaccttgggggccaaaactgccacatgtgcaaaacttagggg 15029140  T
Q  158 gtggtttt 165  Q
    | ||||||    
T  15029139 gcggtttt 15029132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 28785812 - 28785760
Alignment:
Q  181 tagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctatta 233  Q
    ||||| |||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  28785812 tagggggccaaaatcgtaacttcgtgaaagttagggggcggaaactgctatta 28785760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 165
Target Start/End: Original strand, 29834287 - 29834394
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggg 157  Q
    ||||||||||||||||||||||||| ||||||||||||  || |||  |||| ||||||  ||||||||  |||| || ||||  |||||||||||||||    
T  29834287 aaaataacatgtggcacctcacttagggtgtcacgtcagcgtggaccgagtctaaattgaccttgggggagaaaattgtcacaggtgcaaaacttagggg 29834386  T
Q  158 gtggtttt 165  Q
    | ||||||    
T  29834387 gcggtttt 29834394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 36580398 - 36580277
Alignment:
Q  113 aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaag 210  Q
    ||||||| ||||| |||||||||||| |||  |||||||||||||||  |||||| |||         |||||||  |||||||| ||||||||||||||    
T  36580398 aaattggccttggtggccaaaactgctacagttgcaaaacttaggggacggttttgtagttttttt--cttaggggaccaaaatcacaacttcgtgaaag 36580301  T
Q  211 ttagagggcgaaaactgctattaa 234  Q
    |||| || ||||||||||||||||    
T  36580300 ttaggggccgaaaactgctattaa 36580277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 40872245 - 40872356
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaat 100  Q
    ||||||||||||| |||||||||||||| ||| | |||||  |||||||||||| ||   ||||||||| || | |||||||||| |||| |||||||      
T  40872245 cccataagttttgtaactgtagcagtttaggccctccaatgccaatttttggtataa---aaaataacacgtagtacctcacttagggtgccacgtcagc 40872341  T
Q  101 gtagacaaagtcaaa 115  Q
    ||||||  |||||||    
T  40872342 gtagaccgagtcaaa 40872356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 4049953 - 4049894
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaa 64  Q
    |||| ||||||||||||||||||||||| ||||||   ||||||||||||||||| ||||    
T  4049953 taaggtttgcaactgtagcagttttggccccccaaggccaatttttggtaaaaaaaaaaa 4049894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 234
Target Start/End: Original strand, 6726392 - 6726570
Alignment:
Q  62 aaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggt 159  Q
    ||||| || ||||||||||||||| |||| |||||||  ||| ||  ||||||| | ||| | |||| |||||||||||||  |||||||||||||||||    
T  6726392 aaatatcacgtggcacctcacttagggtgccacgtcagcgtaaactgagtcaaaattgtccttgggggcaaaactgccacatgtgcaaaacttagggggt 6726491  T
Q  160 ggttttatag----nnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    | |||| |||             ||||||| ||| |||||||||||||||||||||||| || | ||||| ||||||||    
T  6726492 gattttgtagtttttttttctttcttagggggcctaaatcgcaacttcgtgaaagttaggggacaaaaacagctattaa 6726570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 17876421 - 17876468
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  17876421 gccaaaatcgtaacttcgtgaaagttagggggtgaaaactgctattaa 17876468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 23826286 - 23826333
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||||||||||||||||||| || | ||||||||||||||    
T  23826286 gccaaaatcgcaacttcgtgaaagttaggggacaaaaactgctattaa 23826333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 45697545 - 45697490
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| |||||||||||||||||| ||||||||| || ||||||||| ||||||    
T  45697545 cttagggggccaaaatcgcaacttcgagaaagttaggggacgaaaactgttattaa 45697490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 21939331 - 21939385
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| ||||||||||||||||||||| | |||| |||| ||||||||||||||    
T  21939331 ttagggggccaaaatcgcaacttcgtgatacttagggggccaaaactgctattaa 21939385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 11373891 - 11373850
Alignment:
Q  193 atcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||| |||||||| |||||||||||||||||||    
T  11373891 atcgcaacttcgtaaaagttagggggcgaaaactgctattaa 11373850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 20505156 - 20505099
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||| |||||| ||||||||| | ||||||||| |||| ||||||||||||||||    
T  20505156 cttagggggccaaagtcgcaactttgagaaagttagggggctaaaactgctattaaac 20505099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 3247435 - 3247490
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaacttattt 242  Q
    ||||||||| |||||||||||||||||| || |||||| || |||||| |||||||    
T  3247435 gccaaaatcacaacttcgtgaaagttaggggacgaaaattgttattaagcttattt 3247490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 17876389 - 17876330
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaa 64  Q
    |||||||||||||||||||||||||||| ||| || | ||||| ||| ||||||| ||||    
T  17876389 taagttttgcaactgtagcagttttggcccccaaaaaccaattgttgctaaaaaaaaaaa 17876330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 23746161 - 23746208
Alignment:
Q  190 aaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaact 237  Q
    |||||||||||||||| |||||||| || ||||| |||||||||||||    
T  23746161 aaaatcgcaacttcgtaaaagttaggggacgaaagctgctattaaact 23746208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 214
Target Start/End: Complemental strand, 24433016 - 24432981
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttag 214  Q
    ||||||| ||||||||||||||||||||||||||||    
T  24433016 cttagggggccaaaatcgcaacttcgtgaaagttag 24432981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 41243900 - 41243955
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| |||||||||| ||||| ||||||||||| |  ||||||||||||||||    
T  41243900 cttagggtgccaaaatcgtaactttgtgaaagttagggaccgaaaactgctattaa 41243955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 47909752 - 47909697
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| || ||||||||||||| | ||||||||| |||| ||||||||||||||    
T  47909752 cttagggggctaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 47909697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 11374032 - 11374086
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaa 59  Q
    |||||||||||||| ||||||||||||| | ||||   |||||||||||||||||    
T  11374032 taagttttgcaactttagcagttttggccctccaaagccaatttttggtaaaaaa 11374086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 20505266 - 20505320
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| ||||||||||||||||| | |||| ||| ||| |||||||||||||||    
T  20505266 ttagggggccaaaatcgcaacttcataaaagctagggggtgaaaactgctattaa 20505320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 6726305 - 6726261
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||||    
T  6726305 caaaatcgcaacttcgtgaaaggtag-gggcgaaaactgttattaa 6726261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 6792052 - 6792109
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||||  ||||||||||||||| |  |||||||| |||| ||||||||||||||||    
T  6792052 cttaggggaccaaaatcgcaactttggaaaagttagggggctaaaactgctattaaac 6792109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 18186489 - 18186440
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||||||||||||| | |||||||| ||||||||||  |||||||||    
T  18186489 gccaaaatcgcaacttcataaaagttagggggcgaaaaccactattaaac 18186440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 18504505 - 18504550
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||| |||||||||| || ||||||||| ||||||    
T  18504505 caaaatcgcaacttcatgaaagttaggggacgaaaactgttattaa 18504550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 42438033 - 42438089
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||| ||||||||||||||||| |||||  |||||||| |||| ||| |||||||    
T  42438033 ttagggggccaaaatcgcaacttcttgaaatatagagggccaaaagtgcaattaaac 42438089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 6e-40; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 43074667 - 43074824
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaat 100  Q
    |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||   ||||||||| ||||||||||||||| |||| |||||||      
T  43074667 cccataagttttgcaactgtagcagttttggccccccaatgccaatttttggtaaaa---aaaataacacgtggcacctcacttagggtgccacgtcagc 43074763  T
Q  101 gtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttaggggg 158  Q
    ||||||  |||| ||||||| |||||||||||||||||||||  |||||||||||||||||    
T  43074764 gtagactgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttaggggg 43074824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 51362770 - 51362610
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||  |||||||| || | |||||||||| |||| ||||||| |||||    
T  51362770 taagttttgcaactgtagcagttttggt-ccccaagaccaatttttggtaaaaaa--aaataacacgttgaacctcacttagggtgccacgtcagtgtag 51362674  T
Q  105 acaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    ||  ||||||| ||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  51362673 actgagtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggtttt 51362610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 21597484 - 21597637
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||||||||||||  |||||||||| ||||||  ||||||||| ||||||||||| ||| |||| |||||||  ||||    
T  21597484 taagttttgcaactgtagcagttttggcaccccaaggtcaatttttgataaaaa--aaaataacacgtggcacctcatttagggtgccacgtcagcgtag 21597581  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    ||  |||| ||||| || ||||||||||||||||||||  |||||||| |||||||    
T  21597582 accgagtcaaaattagttttgggggccaaaactgccacatatgcaaaatttagggg 21597637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 2837131 - 2836970
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||| ||| ||||||||||||||| | ||||   |||||||||||||||||  |||||||| ||||||||||||||| |||| ||||||| |||||    
T  2837131 taagttttacaattgtagcagttttggccctccaaggccaatttttggtaaaaaa--aaataacacgtggcacctcacttagggtgccacgtcagtgtag 2837034  T
Q  105 acaaagtc-aaattggtcttgggggccaaaa--ctgccacatgcaaaacttagggggtggtttt 165  Q
    ||  |||| ||||||| ||||||||||||||  ||  |||||||||||||||||||| ||||||    
T  2837033 actgagtcaaaattggccttgggggccaaaactctcacacatgcaaaacttagggggcggtttt 2836970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 234
Target Start/End: Original strand, 12719531 - 12719757
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||   |||||||||  |||||||  ||||||||||| |||||  |||||||||||||||||||||||  |||| ||| |||  ||||    
T  12719531 taagttttgcaactg---cagttttggt-ccccaatgccaatttttggtcaaaaa--aaataacatgtggcacctcacttggggtgccacatcagcgtag 12719624  T
Q  105 acaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaact 201  Q
    ||  ||||||| |||||||||| |||||||||||||||  |||||||||||||||||||||||| |||         ||||||| ||||||||  |||||    
T  12719625 accgagtcaaaattggtcttggaggccaaaactgccacagatgcaaaacttagggggtggttttgtagtttttttttcttagggggccaaaatatcaact 12719724  T
Q  202 tcgtgaaagttagagggcgaaaactgctattaa 234  Q
    | | ||||||||| |||  ||||||||||||||    
T  12719725 ttgggaaagttagggggttaaaactgctattaa 12719757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 234
Target Start/End: Complemental strand, 53312508 - 53312289
Alignment:
Q  15 aactgtagcagttttggcacccc-aatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc- 112  Q
    |||||||||||||||||| |||| ||   ||||||||||||||||| |||    || ||||||||||||||| |||| |||||||  ||||||  ||||     
T  53312508 aactgtagcagttttggcccccctaaggccaatttttggtaaaaaaaaaa----cacgtggcacctcacttagggtgccacgtcagcgtagactgagtcc 53312413  T
Q  113 aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaag 210  Q
    ||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||| |||         ||||||| |||||||||||||||| |  ||||    
T  53312412 aaattggccttgggggccaaaactgccacatgtgcaaaatttagggggtggttttgtagtttgtttttcttagggggccaaaatcgcaactttgaaaaag 53312313  T
Q  211 ttagagggcgaaaactgctattaa 234  Q
    |||| |||| |||| |||||||||    
T  53312312 ttagggggctaaaaatgctattaa 53312289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 53924829 - 53924998
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaaga---aaataacatgtggcacctcacttaaggtgtcacgtcaatg 101  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |   |||||||| ||| || |||||||| |||||||| |||| |    
T  53924829 taagttttgcaactgtagcagttttggc-ccccaagatcaatttttggtaaaaaataaataaataacacgtgacatctcacttagggtgtcacatcaacg 53924927  T
Q  102 tagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatag 169  Q
    |||||  |||| ||||||  |||| ||| |||||||| |||  ||||||||||||||||| | ||||||||    
T  53924928 tagaccgagtcaaaattgaccttgagggtcaaaactgtcacaaatgcaaaacttagggggagattttatag 53924998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 42526043 - 42526153
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaat 100  Q
    ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| ||    ||||||||| ||||||||||||||| |||||||||||| |    
T  42526043 cccattagttttgcaactgtagtagttttggccccccaatgtcaatttttggttaa----aaaataacacgtggcacctcacttagggtgtcacgtcagt 42526138  T
Q  101 gtagacaaagtcaaa 115  Q
    ||||||  |||||||    
T  42526139 gtagactgagtcaaa 42526153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 236
Target Start/End: Complemental strand, 50769594 - 50769364
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||||| |||||| | ||||||||||||||||  ||||||||| ||||||||||||| | ||||  ||||||  ||||    
T  50769594 taagttttgcaactgtagcagttttggc-ccccaagaccaatttttggtaaaaa--aaaataacacgtggcacctcactcagggtgctacgtcagcgtag 50769498  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgcc--acatgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaact 201  Q
     |  |||| ||||||  ||| ||||| |||||||||  | |||||||||||| |||| |||||| |||         ||||||| | |||||||||||||    
T  50769497 gccgagtcaaaattgaccttaggggctaaaactgccatagatgcaaaactta-ggggcggttttgtagtttttttttcttaggggggcaaaatcgcaact 50769399  T
Q  202 tcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    | | ||||||||| |||  ||||||||||||||||    
T  50769398 ttgggaaagttagggggataaaactgctattaaac 50769364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 6637148 - 6637299
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    ||||||||||||||||||| ||||||  ||||||| | |||||||||||||||||   ||||||||||||||||||||||| |||| || |||| |||||    
T  6637148 taagttttgcaactgtagcggttttg--accccaagaccaatttttggtaaaaaa---aataacatgtggcacctcacttagggtgccatgtcagtgtag 6637242  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgcc--acatgcaaaacttaggggg 158  Q
    ||  |||| |||||||  ||| ||||||||||||||  | |||||||||||| ||||    
T  6637243 accgagtcaaaattggcattgtgggccaaaactgccagaaatgcaaaacttaagggg 6637299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 10059766 - 10059940
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaa-------ataacatgtggcac----ctcacttaaggtgtca 93  Q
    |||||||||||||||||||||||||||  ||||||  |||||||||||||||||| |||       |||||| |||||||    |||||||| |||| ||    
T  10059766 taagttttgcaactgtagcagttttggtcccccaaggtcaatttttggtaaaaaaaaaattaaaaaataacacgtggcacgcacctcacttagggtgcca 10059865  T
Q  94 cgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    |||||| ||||||  |||| ||||||| |||| ||||||||||||||||  ||||||||||||||||| ||||||    
T  10059866 cgtcaacgtagaccgagtcaaaattggccttgagggccaaaactgccacagatgcaaaacttagggggcggtttt 10059940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 44356534 - 44356707
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    ||||||||| ||| ||||||||||| |||| ||||| |  |||||| |||||||| ||||||||||||||||||||||||||  ||||||||||||||||    
T  44356534 aaaataacacgtgacacctcacttagggtgccacgttatcgtagaccaagtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggg 44356633  T
Q  158 gtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    | |||||| ||          ||||||  |||||||||||||||| | ||||||||| |||| ||||||||||||||    
T  44356634 gcggttttgta--atttttttcttaggcggccaaaatcgcaactttgagaaagttag-gggctaaaactgctattaa 44356707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 6614928 - 6615060
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||||  ||||||  |||||||||||||||||  || |||||||||||||||||||||| ||||||| ||||  ||||    
T  6614928 taagttttgcaactgtagcagttttgg--ccccaaggtcaatttttggtaaaaa--aatataacatgtggcacctcacttagggtgtcatgtcagcgtag 6615023  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccaca 142  Q
    ||  |||| |||||||| |  |||| |||||||||||||    
T  6615024 accgagtcaaaattggtat--ggggtcaaaactgccaca 6615060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 234
Target Start/End: Original strand, 14449356 - 14449596
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaag--------aaaataacatgtggcacctcacttaaggtgtcacgt 96  Q
    |||||||||||||| || |||||||||| |||||||  ||||||| |||||||||         ||||||||| ||||||||||||||| |||| |||||    
T  14449356 taagttttgcaactataccagttttggccccccaatgccaattttcggtaaaaaaataaaataaaaaataacacgtggcacctcacttatggtgccacgt 14449455  T
Q  97 caatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaa 193  Q
    ||  ||| ||  |||| ||||||| |||||||||||||||||||||  ||||||||||||||| | |||||| |||         |||| |  |||||||    
T  14449456 cagcgtaaaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggagcggttttgtagttttttttccttaagaggccaaaa 14449555  T
Q  194 tcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||| |  |||||||| |||| |||||| |||||||    
T  14449556 tcgcaactttggaaaagttagggggctaaaactactattaa 14449596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 2654037 - 2654205
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaaga------------aaataacatgtggcacctcacttaaggtgtc 92  Q
    |||||||||||||||||||||||||||| ||||||   ||||||||||| ||||| |            |||||||||||||| ||| ||||| |||| |    
T  2654037 taagttttgcaactgtagcagttttggccccccaaagccaatttttggttaaaaaaatatataaacaaaaaataacatgtggctcctgacttagggtgcc 2654136  T
Q  93 acgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttaggggg 158  Q
    ||||||  |||||| ||||| ||||||| |||||||| ||||||||||||  |||||||||||||||||    
T  2654137 acgtcagcgtagaccaagtcaaaattggccttgggggtcaaaactgccacatatgcaaaacttaggggg 2654205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 6207255 - 6207417
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaat 100  Q
    |||||||||||| ||||||||||||||||||| |||||| | ||||||||||     ||||||| || ||||| || ||||||||  ||| ||| | |      
T  6207255 cccataagttttacaactgtagcagttttggctccccaagaccaatttttgg-----aagaaaaaaagatgtgacatctcacttagagtgccacattagc 6207349  T
Q  101 gtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    |||||| ||||| ||||||  |||||||||||||| ||||||  ||||||||||||||||| ||||||    
T  6207350 gtagaccaagtcaaaattgaccttgggggccaaaattgccacaaatgcaaaacttagggggcggtttt 6207417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 14449331 - 14449271
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaactta 239  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  14449331 cttagggggccaaaatctcaacttcgtgaaagttagggggcgaaaactgctattaaactta 14449271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 49185747 - 49185665
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca 142  Q
    |||||||||||||||||||| |||| |||| |||||||  |||||| ||||| ||||||| ||||||||||||||||||||||    
T  49185747 aaaataacatgtggcacctcgcttagggtgccacgtcagcgtagaccaagtcaaaattggccttgggggccaaaactgccaca 49185665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 25909665 - 25909490
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccaca--tgcaaaacttagggg 157  Q
    ||||||||| |||||| || |||||||||| |||||||  ||||||  ||||||| |||| |||||||||||||||  |||||  |||||||||||||||    
T  25909665 aaaataacacgtggcatcttacttaaggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaacctccacaagtgcaaaacttagggg 25909566  T
Q  158 gtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    | ||||||||||         ||||||| ||||||||| |||||| |  |||||||| |||  ||||||||||||||    
T  25909565 gcggttttatag-ttttttttcttagggggccaaaatcacaactttggaaaagttagggggttaaaactgctattaa 25909490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 50769552 - 50769672
Alignment:
Q  113 aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaag 210  Q
    |||||||||||||||||||||||||| |||  ||||||||||||  || ||||||||||          |||||| ||||||||||||||||||| ||||    
T  50769552 aaattggtcttgggggccaaaactgctacagttgcaaaacttagtaggcggttttatagttttttt---ttagggggccaaaatcgcaacttcgtaaaag 50769648  T
Q  211 ttagagggcgaaaactgctattaa 234  Q
    |||| |||||||||||||| ||||    
T  50769649 ttagggggcgaaaactgcttttaa 50769672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 35383822 - 35383768
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  35383822 ttagggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaa 35383768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 54855539 - 54855382
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaa--aataacatgtggcacctcacttaaggtgtcacgtcaatgt 102  Q
    ||||||||| |||| ||| ||||||||| ||||||   ||||||||||||||||  ||  ||||||| ||||||||||||||| |||| |||||||  ||    
T  54855539 taagttttgtaactttagaagttttggccccccaaggccaatttttggtaaaaataaataaataacaagtggcacctcacttagggtgccacgtcagcgt 54855440  T
Q  103 agacaaagtc-aaattggtcttgggggccaaaactgcc-acatgcaaaacttaggggg 158  Q
    ||||  |||| |||||||  |||||| |||||||| || | |||||||||||| ||||    
T  54855439 agaccgagtcaaaattggctttggggaccaaaactaccaagatgcaaaacttaagggg 54855382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 4796178 - 4796286
Alignment:
Q  63 aataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggt 159  Q
    ||||||| ||||||||||||||| |||| |||||||  ||||||  |||| |||||| | |||||||||||||||||||||  |||||||||||  |||     
T  4796178 aataacaagtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgattttgggggccaaaactgccacaggtgcaaaacttaaagggc 4796277  T
Q  160 ggttttata 168  Q
    |||||||||    
T  4796278 ggttttata 4796286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 2016975 - 2016869
Alignment:
Q  54 aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccaca--tgcaaaac 150  Q
    |||||| |||| |||| |||| |||||||||| |||| |||||||  ||||||  ||||||| |||| ||||||||||||||||||||||  ||||||||    
T  2016975 aaaaaaaaaaaaaacacgtgg-acctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacatgtgcaaaac 2016877  T
Q  151 ttaggggg 158  Q
    ||||||||    
T  2016876 ttaggggg 2016869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 43074666 - 43074619
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  43074666 gccaaaatcgcaacttcgtgaaagttagggggcgaaaattgctattaa 43074619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 34771353 - 34771462
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||| |  |  ||   ||||| ||||||||||| ||||||||| ||||||||||||||| |||| ||| |||| ||||    
T  34771353 taagttttgcaactgtagcagttttgccctcataaggccaattattggtaaaaaa-aaaataacacgtggcacctcacttagggtgccacatcaacgtag 34771451  T
Q  105 acaaagtcaaa 115  Q
    ||  |||||||    
T  34771452 acggagtcaaa 34771462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 35393934 - 35393980
Alignment:
Q  188 ccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  35393934 ccaaaatcgcaacttcgtgaaagttagggggtgaaaactgctattaa 35393980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 51371695 - 51371541
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    ||||||||  |||| |||| |||||||| ||||||  |||||||||||||||||  | || |||| ||||||||||| ||| |||| ||||||| |||||    
T  51371695 taagtttttaaactatagccgttttggccccccaaggtcaatttttggtaaaaa--ataacaacacgtggcacctcatttagggtgccacgtcagtgtag 51371598  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgcc--acatgcaaaacttaggggg 158  Q
    ||  |||| ||||||   ||||||| ||||||||||  | |||||||||||| ||||    
T  51371597 accgagtcaaaattgacattgggggtcaaaactgccatatatgcaaaacttaagggg 51371541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 8965603 - 8965763
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    ||||||||||||||||  |||||||||  ||||||  ||||||||||| | |||| ||||||||| ||||      ||||| |||| ||| |||| ||||    
T  8965603 taagttttgcaactgtgccagttttggt-ccccaaggtcaatttttggaagaaaaaaaaataacacgtgg------acttagggtgccacatcaacgtag 8965695  T
Q  105 acaaagtcaaattggtc-ttgggggccaaaactgccaca--tgcaaaacttagggggtggttttatag 169  Q
    ||  ||||||| | | | |||||| ||||||||||||||  |||||||||||||||| ||||||||||    
T  8965696 accgagtcaaaattgacattggggaccaaaactgccacagatgcaaaacttagggggcggttttatag 8965763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 21322754 - 21322709
Alignment:
Q  190 aaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaa 235  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||    
T  21322754 aaaatcgcaacttcatgaaagttagagggcgaaaattgctattaaa 21322709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 21871462 - 21871630
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggt-----aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaa 99  Q
    |||||||||||||||||||||||||||| | |||| | |||||||||||     ||| || ||||||||| ||| |||| ||||||  |||||| ||||     
T  21871462 taagttttgcaactgtagcagttttggccctccaaaaccaatttttggtaaataaaataaaaaaataacacgtgacaccccacttagagtgtcatgtcag 21871561  T
Q  100 tgtagacaaag-tcaaattggtcttgggggccaaaactgcc--acatgcaaaacttagggggtggtttt 165  Q
     ||||||  || | |||||| | ||||||||||||||| ||  | |||||||||||||| || ||||||    
T  21871562 cgtagaccgagttaaaattgattttgggggccaaaactaccaaagatgcaaaacttaggaggcggtttt 21871630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 21927323 - 21927491
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggt-----aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaa 99  Q
    |||||||||||||||||||||||||||| | |||| | |||||||||||     ||| || ||||||||| ||| |||| ||||||  |||||| ||||     
T  21927323 taagttttgcaactgtagcagttttggccctccaaaaccaatttttggtaaataaaataaaaaaataacacgtgacaccccacttagagtgtcatgtcag 21927422  T
Q  100 tgtagacaaag-tcaaattggtcttgggggccaaaactgcc--acatgcaaaacttagggggtggtttt 165  Q
     ||||||  || | |||||| | ||||||||||||||| ||  | |||||||||||||| || ||||||    
T  21927423 cgtagaccgagttaaaattgattttgggggccaaaactaccaaagatgcaaaacttaggaggcggtttt 21927491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 27978930 - 27978695
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaa------aataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    |||||||| ||||| ||||||||||| | |||||||| ||||||||||||||||| ||      ||||||| ||||||| |||| |  |||| |||||||    
T  27978930 taagttttacaactctagcagttttgac-ccccaataccaatttttggtaaaaaaaaattaaaaaataacacgtggcacttcacgtggggtgccacgtca 27978832  T
Q  99 atgtagacaaagtcaaa-ttggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatc 195  Q
      ||||||  ||||||| |||| |||||||| |||||||||||||  |||||||||||   ||  ||||| ||          ||||||| | |||||||    
T  27978831 gcgtagaccgagtcaaaattggccttgggggtcaaaactgccacaaatgcaaaacttatatggcagttttgta--atttttttcttagggggtcaaaatc 27978734  T
Q  196 gcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| | ||||||||||||||  |||||||||||||    
T  27978733 gcaactttgagaaagttagagggcttaaactgctattaa 27978695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 29697753 - 29697593
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||| ||||||||  ||| ||   ||||||||| | ||||  ||||||||| ||| ||||||||||| |||| |||||||  ||||    
T  29697753 taagttttgcaactgtagtagttttggtcccctaaggccaatttttgattaaaa--aaaataacacgtgacacctcacttagggtgccacgtcagcgtag 29697656  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    ||   ||| ||||||| ||| ||  |||||||||||||  ||||||||||||||||| ||||||    
T  29697655 actgggtcaaaattggcctt-ggaaccaaaactgccacagatgcaaaacttagggggcggtttt 29697593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 6614958 - 6614850
Alignment:
Q  125 ggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagagggcgaa 222  Q
    |||||||||||||| |||  ||||||||||||||| ||||||| |||         |||| ||||||||||||||||||||||||||||||  || ||||    
T  6614958 ggggccaaaactgctacagttgcaaaacttaggggatggttttgtagtttttt---cttaaggagccaaaatcgcaacttcgtgaaagttaagggtcgaa 6614862  T
Q  223 aactgctattaa 234  Q
    || |||||||||    
T  6614861 aaatgctattaa 6614850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 11824427 - 11824191
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggta---aaaa---agaaaataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    |||||||||||||||||| ||||||||| |  ||| | ||||||||||||   ||||   | |||||||||  |||||||||||||| |||| ||| |||    
T  11824427 taagttttgcaactgtagtagttttggccctgcaagaccaatttttggtattaaaaatttaaaaaataacaattggcacctcacttagggtgccacatca 11824328  T
Q  99 atgtagacaaagtcaaa-ttggtcttgggggccaaaactgc--cacatgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatc 195  Q
      ||||||  ||||||| |||| ||||||  ||||||||||  ||||||||||||||| |||| |||||| |||         |||||||| ||||||||    
T  11824327 gcgtagactgagtcaaaattggccttggga-ccaaaactgccacacatgcaaaactta-ggggcggttttgtagtttttgtttcttagggaaccaaaatc 11824230  T
Q  196 gcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
     ||||||   ||||||||| |||  ||||||||||||||    
T  11824229 acaactttaggaaagttagggggttaaaactgctattaa 11824191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 3658190 - 3658237
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||||||    
T  3658190 caaaatcgcaacttcataaaagttagaggacgaaaactgctattaaac 3658237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 142
Target Start/End: Complemental strand, 8070808 - 8070721
Alignment:
Q  56 aaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaag-tcaaattggtcttgggggccaaaactgccaca 142  Q
    |||| ||||||||| ||||||||||||||  |||| |||||||  |||||| ||| | |||||| ||| |||||||||||||||||||    
T  8070808 aaaataaaataacacgtggcacctcacttggggtgccacgtcagcgtagaccaagttaaaattgatctagggggccaaaactgccaca 8070721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 234
Target Start/End: Original strand, 20112288 - 20112460
Alignment:
Q  63 aataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggggt 159  Q
    ||||||| |||||||||||||||  ||| |||||||  || |||  ||||||| ||||  ||||||||||||||||||||  ||||||||||| |||||     
T  20112288 aataacacgtggcacctcacttagagtgccacgtcagcgttgaccgagtcaaaattggctttgggggccaaaactgccacatatgcaaaactttgggggc 20112387  T
Q  160 ggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| |||         ||| ||| |||||||||||||||| |  ||||||||| ||| ||||||| ||||||    
T  20112388 ggttttgtag--tatttttctttgggggccaaaatcgcaactttggaaaagttagaaggctaaaactgttattaa 20112460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 140
Target Start/End: Original strand, 35383888 - 35383975
Alignment:
Q  54 aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgcca 140  Q
    |||||| ||| ||||  ||||||||||||||| |||| |||||||| ||||||  | || ||||||| ||||||||||||||||||||    
T  35383888 aaaaaaaaaattaacgcgtggcacctcacttacggtgccacgtcaacgtagaccgaatcaaaattggccttgggggccaaaactgcca 35383975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 54983963 - 54984069
Alignment:
Q  55 aaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaact 151  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||  |||||| ||| | ||||||   ||||| |||||||||| ||||  ||||||| |    
T  54983963 aaaaagaaaataacatggggcacctcacttagggtgccacgtcagcgtagaccaagccaaaattgacattgggtgccaaaactgacacatgtgcaaaatt 54984062  T
Q  152 taggggg 158  Q
    |||||||    
T  54984063 taggggg 54984069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 234
Target Start/End: Original strand, 1420675 - 1420855
Alignment:
Q  56 aaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaactt 152  Q
    |||| ||| ||||| ||||||||||||||| |||| |||||||  || |||  |||| ||||||| |||||||| || |||||||||  |||||||||||    
T  1420675 aaaaaaaactaacacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaaaattggccttgggggtcataactgccacaaatgcaaaactt 1420774  T
Q  153 agggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    | |||| |||||| |||         |||||||  ||||||||| ||||| | ||||||||  |||| ||||||||||||||    
T  1420775 atggggcggttttgtag-ttctttttcttaggggaccaaaatcgtaactttgggaaagttaaggggctaaaactgctattaa 1420855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1571643 - 1571585
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaa 59  Q
    |||||||||||||||||||| ||||||||||| ||| ||   |||||||||||||||||    
T  1571643 cccataagttttgcaactgtggcagttttggccccctaaggccaatttttggtaaaaaa 1571585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 4411493 - 4411539
Alignment:
Q  190 aaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||||||||||||||||| |||| |||||||||||| ||||||||    
T  4411493 aaaatcgcaacttcgtgaaaattagggggcgaaaactgttattaaac 4411539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 16292534 - 16292580
Alignment:
Q  190 aaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||||    
T  16292534 aaaatcgcaacttcgtgaaagttagggggcgaaaattgttattaaac 16292580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 35615433 - 35615478
Alignment:
Q  188 ccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  35615433 ccaaaatcgcaacttcgtgaaagttag-gggtgaaaactgctattaa 35615478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 51371728 - 51371774
Alignment:
Q  188 ccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  51371728 ccaaaatcgcaacttcgagaaagttagggggcgaaaactactattaa 51371774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 11824460 - 11824509
Alignment:
Q  185 gagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||||||||| |||||||| ||||| |||||| ||||||    
T  11824460 gagccaaaatcgcaacttcgtaaaagttagggggcggaaactgttattaa 11824509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 21322790 - 21322958
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaaga-aaataacatgtggcacctcacttaaggtgtcacgtcaatgta 103  Q
    |||||||||||||| || ||||||||||  |||||   ||||||||||||||||| | |||||| | |||||| |||| |||  ||||| ||| |  |||    
T  21322790 taagttttgcaactttaacagttttggcctcccaaggccaatttttggtaaaaaaaataaataatacgtggcatctcatttagagtgtcgcgttagcgta 21322889  T
Q  104 gacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatag 169  Q
    |||  |||| |||||||  ||||||| |||||||| |||  |||||||||||||| ||  |||||||||    
T  21322890 gaccgagtcaaaattggcattgggggtcaaaactgtcacatatgcaaaacttaggaggcagttttatag 21322958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 37831650 - 37831593
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||| ||||||||||||||||| | ||| |||| |||| ||||||||||||||||    
T  37831650 cttagggggccaaaatcgcaacttcttaaaacttagggggctaaaactgctattaaac 37831593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 51233658 - 51233582
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactg 137  Q
    |||||| || ||||||||||||||| |||| |||||||  |||||| ||||| ||||||| |||||||||||||||||    
T  51233658 aaaataccacgtggcacctcacttagggtgccacgtcagcgtagaccaagtccaaattgg-cttgggggccaaaactg 51233582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 53312551 - 53312596
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||    
T  53312551 caaaatcgcaacttcgtgaaagttagggggtgaaaactgttattaa 53312596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 2654008 - 2653956
Alignment:
Q  182 agggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||| ||||||||||||||||||| ||||||||  ||| ||||||||||||||    
T  2654008 agggggccaaaatcgcaacttcgtaaaagttaggaggcaaaaactgctattaa 2653956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 3658156 - 3658104
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaa 57  Q
    |||||||||||||||||||||||||||| ||||||   |||||||||| ||||    
T  3658156 taagttttgcaactgtagcagttttggctccccaaggccaatttttggcaaaa 3658104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 136
Target Start/End: Complemental strand, 35393478 - 35393402
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaact 136  Q
    ||||||||||||||||||||||||| |||| ||| |||   ||||  ||||| ||||||| ||||||||||||||||    
T  35393478 aaaataacatgtggcacctcacttagggtgccacatcagcatagaacaagtcaaaattgggcttgggggccaaaact 35393402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 35393897 - 35393841
Alignment:
Q  8 gttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaa 64  Q
    |||||| |||||||||||||||||| ||||||   ||||||||||||||||| ||||    
T  35393897 gttttgtaactgtagcagttttggccccccaaggccaatttttggtaaaaaataaaa 35393841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 4796114 - 4796145
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggc 32  Q
    ||||||||||||||||||||||||||||||||    
T  4796114 cccataagttttgcaactgtagcagttttggc 4796145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8070878 - 8070822
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaa 59  Q
    |||||||||||||||| |||||||||||||  ||||||||  ||||||||| |||||||    
T  8070878 cccataagttttgcaattgtagcagttttg--accccaatgccaatttttgataaaaaa 8070822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 23759611 - 23759564
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||||  |||||||||| ||||||||||| |||||||    
T  23759611 gccaaaatcgcaactttatgaaagttagggggcgaaaactactattaa 23759564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 27978960 - 27979007
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||||||| |||||||| ||||||||| || ||||||    
T  27978960 gccaaaatcgcaacttcgttaaagttagggggcgaaaaatgttattaa 27979007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 29697778 - 29697832
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||| |||||||||||||||| ||||||||||  || |||||||||||||||    
T  29697778 cttaggga-ccaaaatcgcaacttcatgaaagttaggaggtgaaaactgctattaa 29697832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 49185815 - 49185869
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| |||||||||||||||| ||||||||| | ||| |||||||||||||||    
T  49185815 cttagggggccaaaatcgcaactttgtgaaagtt-gggggtgaaaactgctattaa 49185869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 14016964 - 14016906
Alignment:
Q  6 aagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaa 64  Q
    ||||||||||||||||||||||| ||  ||||||   ||||||||||||||||| ||||    
T  14016964 aagttttgcaactgtagcagtttcggtcccccaaggccaatttttggtaaaaaaaaaaa 14016906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 20117978 - 20118036
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaa 59  Q
    |||||||||||| ||||||| ||||||||| || |||||   |||||||||||||||||    
T  20117978 cccataagttttacaactgtcgcagttttgacatcccaaagccaatttttggtaaaaaa 20118036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 21451635 - 21451581
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa 115  Q
    ||||||| | ||||||||||||||| |||||||||||| |||||||  |||||||    
T  21451635 aaaataatacgtggcacctcacttagggtgtcacgtcagtgtagaccgagtcaaa 21451581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 26089701 - 26089610
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    |||||||| |||||||| |||||||||| | ||||   |||||||||||| |||   |||||||| ||||||| ||||||| |||| |||||||    
T  26089701 taagttttacaactgtaacagttttggctcgccaaggccaatttttggtataaa--taaataacacgtggcacttcacttagggtgccacgtca 26089610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 2181356 - 2181304
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaa 58  Q
    ||||||||||||||||| |||||||||| ||||||   ||||||||||||||||    
T  2181356 taagttttgcaactgtaacagttttggc-ccccaaggacaatttttggtaaaaa 2181304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 47999698 - 47999625
Alignment:
Q  70 tgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca 142  Q
    ||||||||||||||||||||| |||||||  ||||||  | || ||||||| ||| |||| |||||||||||||    
T  47999698 tgtggcacctcacttaaggtgccacgtcagcgtagaccgaatcaaaattggccttaggggtcaaaactgccaca 47999625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 53924795 - 53924750
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| |||||||||||||||||| |||||| |||| |||||||    
T  53924795 caaaatcacaacttcgtgaaagttagggggcgagaactactattaa 53924750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 6768924 - 6768972
Alignment:
Q  54 aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgt 102  Q
    |||||| ||||| ||| ||||||||||||||| |||| |||||||||||    
T  6768924 aaaaaaaaaaatgacacgtggcacctcacttagggtgccacgtcaatgt 6768972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 8965579 - 8965523
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||| || |||||| ||||||||| ||||| || ||||||||||| |||||||||    
T  8965579 ttagggggctaaaatcacaacttcgtaaaagtaagggggcgaaaacttctattaaac 8965523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 18937292 - 18937248
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctat 231  Q
    |||||||| ||||||||||||||||||||||  |||| |||||||    
T  18937292 gccaaaattgcaacttcgtgaaagttagaggaagaaacctgctat 18937248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 21451514 - 21451462
Alignment:
Q  182 agggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| ||||||||||||| | |||||||||  ||| ||||||||||||||    
T  21451514 agggagcaaaaatcgcaactttgagaaagttaggaggctaaaactgctattaa 21451462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 34771311 - 34771275
Alignment:
Q  198 aacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  34771311 aactttgtgaaagttagagggcgaaaactgttattaa 34771275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 54983894 - 54983846
Alignment:
Q  191 aaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaactta 239  Q
    |||||||| |||||| |||||||| || |||||||||||||||| ||||    
T  54983894 aaatcgcatcttcgtaaaagttaggggacgaaaactgctattaagctta 54983846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 9e-36; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 17760921 - 17760685
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaa---aaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatg 101  Q
    |||||||||||| ||||||||||||||| ||||||  |||| |||||||||   |||| ||||||||| ||||||||||| ||| |||| ||||||| ||    
T  17760921 taagttttgcaattgtagcagttttggccccccaaggtcaagttttggtaaaataaaataaaataacacgtggcacctcatttagggtgccacgtcagtg 17760822  T
Q  102 tagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatag-nnnnnnnnncttagggagccaaaatcgc 197  Q
    |||||  |||| |||||| |||||| |||||||||||||||  |||||||||||||||||||||||| |||          ||||||| |||||||||||    
T  17760821 tagaccgagtcaaaattgatcttggtggccaaaactgccacatatgcaaaacttagggggtggttttgtagttttttttttcttagggggccaaaatcgc 17760722  T
Q  198 aacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||| | | ||||||| |||| ||| ||||||||||    
T  17760721 aactttgaggaagttagggggctaaagctgctattaa 17760685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 41997720 - 41997884
Alignment:
Q  3 cataagttttgcaactgtagcagttttggcaccc-caatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatg 101  Q
    |||||||||||||||||||||||||||||| ||| ||| | ||| ||||||||||||| |||| |  ||||||||||||||||| ||||||||||||  |    
T  41997720 cataagttttgcaactgtagcagttttggccccctcaagaccaaattttggtaaaaaaaaaaaca--atgtggcacctcacttagggtgtcacgtcagcg 41997817  T
Q  102 tagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    |||||  |||| ||||||| ||||| |||||||||||||||  ||||||| |||||||| |||||||    
T  41997818 tagaccgagtcaaaattggccttggaggccaaaactgccacagatgcaaagcttaggggttggtttt 41997884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 50401603 - 50401442
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||| ||| ||||||  ||||||||||||||||||  |||||| | ||||||||||| ||||||||||||||||  ||||    
T  50401603 taagttttgcaactgtagcagttt-ggctccccaaggtcaatttttggtaaaaaaataaataatacgtggcacctcatttaaggtgtcacgtcagagtag 50401505  T
Q  105 acaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    ||  ||||||| |||| ||||||| ||||||||| |||  ||||||||||||||||| ||||||    
T  50401504 accgagtcaaaattggccttgggg-ccaaaactgtcacaaatgcaaaacttagggggcggtttt 50401442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 3377743 - 3377504
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaa--------agaaaataacatgtggcacctcacttaaggtgtcacgt 96  Q
    |||||||||||||| ||||||||||||| | ||||   ||||||||||||||||        | |||||||||| || ||||||||||| || |||||||    
T  3377743 taagttttgcaactttagcagttttggccctccaaggccaatttttggtaaaaagataaaataaaaaataacatatgacacctcacttagggcgtcacgt 3377644  T
Q  97 caatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaa 193  Q
    ||  ||||||  ||||||| |||| |||||||||||||||||||||  ||||||||||||||||| |||||| |||         ||||||| |||||||    
T  3377643 cagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtag-ttttttttcttagggggccaaaa 3377545  T
Q  194 tcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||| |  |||||||| |||| ||||||||||||||    
T  3377544 tcgcaactttggaaaagttagggggctaaaactgctattaa 3377504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 165
Target Start/End: Complemental strand, 44672539 - 44672383
Alignment:
Q  9 ttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaa 108  Q
    |||| ||||||||||||||||||| ||||||  ||||||||||||||||   ||||||||| ||||||| ||||||| |||| |||||||  ||||||      
T  44672539 tttttcaactgtagcagttttggccccccaaggtcaatttttggtaaaa---aaaataacacgtggcacttcacttagggtgccacgtcagcgtagaccg 44672443  T
Q  109 agtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    | || |||||| ||||||| ||||||||||||||  ||||||||||||||||| ||||||    
T  44672442 aatcaaaattgatcttgggcgccaaaactgccacatatgcaaaacttagggggcggtttt 44672383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 46573058 - 46572905
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||||  |||| | ||||||||||| ||||||| ||| ||||| ||||||||||||||| ||| |||| |||  ||||    
T  46573058 taagttttgcaactgtagcagttttggtcccccgagatcaatttttgataaaaaaaaaattaacacgtggcacctcacttagggtctcacatcagcgtag 46572959  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    || ||||| ||||||| |||||||  | ||||||||||  ||||||||||||||||    
T  46572958 accaagtcaaaattggccttgggg--ccaaactgccacaaatgcaaaacttagggg 46572905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 12960928 - 12961080
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||| ||||||||||||| ||||||    ||||||||||||||   |||| ||||||||||| |||||||| ||||||||||||  ||||    
T  12960928 taagttttgcaactatagcagttttggccccccaaggctaatttttggtaaaa---aaaagaacatgtggcatctcacttagggtgtcacgtcagcgtag 12961024  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggg 157  Q
    ||  |||| ||||||| ||| || |||||||||||||||  ||||||| |||||||    
T  12961025 accgagtcaaaattggcctttggagccaaaactgccacagttgcaaaatttagggg 12961080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 16298139 - 16298293
Alignment:
Q  3 cataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgt 102  Q
    |||||||||| ||||||||||||||||||   |||||    ||||||||||||||||  |||||||| |||||||||||||||  |||||||||||  ||    
T  16298139 cataagttttacaactgtagcagttttggt--cccaaggctaatttttggtaaaaaa--aaataacacgtggcacctcacttagagtgtcacgtcagcgt 16298234  T
Q  103 agacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttaggggg 158  Q
    |||| ||||| |||||| | ||||| ||||||||||||||  ||||||||| |||||||    
T  16298235 agaccaagtcaaaattgatattgggagccaaaactgccacagatgcaaaacataggggg 16298293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 45739171 - 45739006
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaat 100  Q
    |||||||||||||||||||||||||||||||| ||||||   ||||||| ||||||||| |||| |||  ||||||||||||||| |||| ||||| |      
T  45739171 cccataagttttgcaactgtagcagttttggccccccaaggccaattttgggtaaaaaaaaaaaaaac--gtggcacctcacttagggtgccacgttagc 45739074  T
Q  101 gtagacaaagtc-aaattggtcttgggggccaaaactgcc--acatgcaaaacttagggggtggtttt 165  Q
     |||||  |||| ||||||   ||||||||||||||||||  | |||||||||||| |||| ||||||    
T  45739073 atagaccgagtcaaaattgactttgggggccaaaactgccatagatgcaaaacttaaggggcggtttt 45739006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 32295035 - 32295196
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||| ||||||||||||||| || |||   ||||||||||||||||| ||||||||| ||||||||||| ||| |||| ||||||   ||||    
T  32295035 taagttttgcaattgtagcagttttggc-ccacaaggccaatttttggtaaaaaa-aaaataacacgtggcacctcatttagggtgccacgtccgggtag 32295132  T
Q  105 acaaag-tcaaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    ||  || | |||||||  |||||||||||||||| |||  ||| |||||||||| |||||||||    
T  32295133 accgagttaaaattggctttgggggccaaaactgtcacaaatgtaaaacttaggtggtggtttt 32295196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 1853591 - 1853688
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaattggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    ||||||||| ||||| || |||||| ||||||||||||| |||||| |||||||||||||||| |||||||||| || |||  ||||||||||||||||    
T  1853591 aaaataacacgtggctccccacttagggtgtcacgtcaacgtagaccaagtcaaattggtctt-ggggccaaaattgtcacaaatgcaaaacttagggg 1853688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 169
Target Start/End: Complemental strand, 25486443 - 25486281
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||| ||||| ||||||||||||| ||||||  |||||||||||||||    ||||||||| ||||||||||| ||| |||| |||||||  ||||    
T  25486443 taagttttacaactatagcagttttggccccccaaagtcaatttttggtaaa----aaaataacacgtggcacctcatttagggtgccacgtcagcgtag 25486348  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatag 169  Q
    ||  |||| ||||||  ||| ||||||||||| |||||  ||||||||||||| ||| | ||||||||    
T  25486347 accgagtcaaaattgaacttaggggccaaaac-gccacagatgcaaaacttagagggcgattttatag 25486281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 23891742 - 23891795
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaa 58  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  23891742 taagttttgcaactgtagcagttttggccccccaagatcaatttttggtaaaaa 23891795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 165
Target Start/End: Complemental strand, 23220744 - 23220637
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccaca--tgcaaaacttagggg 157  Q
    |||| |||||||||||||||||||| |||| |||||||  ||||||  | ||||| |||||||||||||||||||| ||||||  ||||||||||| |||    
T  23220744 aaaaaaacatgtggcacctcacttagggtgccacgtcagcgtagaccgaatcaaaattggtcttgggggccaaaaccgccacatgtgcaaaacttaaggg 23220645  T
Q  158 gtggtttt 165  Q
    | ||||||    
T  23220644 gcggtttt 23220637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 39642283 - 39642451
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaaga---aaataa--catgtggcacctcacttaaggtgtcacgtcaa 99  Q
    |||||| ||||| ||||||||||||||| ||||||   ||||||||||||||||| |   ||||||  || ||||||| ||||||| |||| | |||||     
T  39642283 taagttctgcaattgtagcagttttggccccccaaggccaatttttggtaaaaaaaataaaaataaaacacgtggcacttcacttagggtgccgcgtcag 39642382  T
Q  100 tgtagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
      |||||  ||||||| ||||  ||||||||||||||||||||  ||||||||||||||||| ||||||    
T  39642383 catagaccgagtcaaaattggctttgggggccaaaactgccacaaatgcaaaacttagggggcggtttt 39642451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 39642250 - 39642203
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  39642250 gccaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaa 39642203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 46505255 - 46505401
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||| ||  ||||||| |||||||  |||||| || ||||||| |||    |||||||||||||||||| ||||||||||||| |||     
T  46505255 taagttttgcaactgtggcttttttggc-ccccaatggcaatttatgataaaaaaaaaa----catgtggcacctcacttagggtgtcacgtcaacgtaa 46505349  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgc--cacatgcaaaactta 153  Q
    ||  || | ||||||||||||||||||| ||||||  || ||||||||||||    
T  46505350 accgagccaaaattggtcttgggggccagaactgccgcaaatgcaaaactta 46505401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 14979028 - 14978874
Alignment:
Q  9 ttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaa---aagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtaga 105  Q
    |||||||||||||| |||||||| |||||||   |||||||   |||||   || ||||||||||||||||||||||||| |||| ||| |||  |||||    
T  14979028 ttttgcaactgtagtagttttgg-accccaaggccaattttaaataaaaaataaaaaaataacatgtggcacctcacttagggtgccacatcagcgtaga 14978930  T
Q  106 caaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttaggggg 158  Q
    | || || ||||||| ||| |||||||||||| |||||  ||||||||||||||||    
T  14978929 ccaattcaaaattggcctttggggccaaaactaccacaggtgcaaaacttaggggg 14978874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 46912272 - 46912407
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataa-catgtggcacctcacttaaggtgtcacgtcaatgta 103  Q
    |||||||||||| ||||| |||||||  |||||||  |||||||||||||||||| |||| || || ||||||||||| ||| |||| |||||||  |||    
T  46912272 taagttttgcaattgtagaagttttg--accccaaggtcaatttttggtaaaaaaaaaaaaaaacacgtggcacctcatttagggtgccacgtcagcgta 46912369  T
Q  104 gacaaagtc-aaattggtcttgggggccaaaactgcca 140  Q
     ||| |||| |||||||  || ||||||||||||||||    
T  46912370 aacagagtcaaaattggcattaggggccaaaactgcca 46912407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 16874553 - 16874498
Alignment:
Q  192 aatcgcaacttcgtgaaagttagagggcgaaaactgctattaaacttatttattaa 247  Q
    |||||||||||||| |||||||| ||||||||| ||||||||||||||||| ||||    
T  16874553 aatcgcaacttcgtaaaagttagggggcgaaaattgctattaaacttattttttaa 16874498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 165
Target Start/End: Original strand, 16874640 - 16874746
Alignment:
Q  62 aaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttaggggg 158  Q
    ||||| || ||||||||||||||| |||| |||||||  ||||||  |||| ||||||| |||||| ||||||||||||||  |||||||||||| ||||    
T  16874640 aaatatcacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggagccaaaactgccacagatgcaaaacttatgggg 16874739  T
Q  159 tggtttt 165  Q
     ||||||    
T  16874740 cggtttt 16874746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 18632603 - 18632650
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  18632603 gccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 18632650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 23891718 - 23891663
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| ||||||||| |||||||||||||||||| | |||||||||||||||||    
T  23891718 cttagggggccaaaatcacaacttcgtgaaagttagggagcgaaaactgctattaa 23891663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 30849307 - 30849465
Alignment:
Q  9 ttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaa--------taacatgtggcacctcacttaaggtgtcacgtcaat 100  Q
    |||||||||| ||||||||||| | |||||| ||||||||||||||||||| ||||        ||||| ||||||||||||||| ||||| ||||||      
T  30849307 ttttgcaactatagcagttttgac-ccccaagatcaatttttggtaaaaaataaaaataaaaaataacacgtggcacctcacttagggtgttacgtcagc 30849405  T
Q  101 gtagacaaag-tcaaattggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
     ||||| ||| | ||||||| |||| |||||||||||  |||  ||||||||||||||||    
T  30849406 atagaccaagttaaaattggccttgtgggccaaaactatcacagatgcaaaacttagggg 30849465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 49426078 - 49426223
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||| ||||||||||||| | || |||   ||||||||||| |||||    |||||| ||| ||||| ||||| ||||||||||||  ||||    
T  49426078 taagttttgcaattgtagcagttttgac-cctcaaggccaatttttggttaaaaa----ataacacgtgacaccttacttagggtgtcacgtcagcgtag 49426172  T
Q  105 acaaagtcaaattggtcttgggggccaaaactgccac--atgcaaaactta 153  Q
    || |||||||| | | | | |||||||||||||||||  ||||||||||||    
T  49426173 accaagtcaaaattggcattggggccaaaactgccacaaatgcaaaactta 49426223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 25085530 - 25085611
Alignment:
Q  62 aaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca 142  Q
    |||||||| ||||||||||||||| |||| ||||||| |||||||   ||| |||||| ||||| |||||||||||||||||    
T  25085530 aaataacacgtggcacctcacttagggtgccacgtcagtgtagaccgggtcaaaattgatcttgagggccaaaactgccaca 25085611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 25486474 - 25486523
Alignment:
Q  185 gagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||||    
T  25486474 gagctaaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaa 25486523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 45739197 - 45739246
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||||    
T  45739197 gccaaaatcgcaacttcgtgaaagttaaaggacgaaaactactattaaac 45739246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 167
Target Start/End: Original strand, 20224667 - 20224775
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaattggtc-ttgggggccaaaactgccac-atgcaaaacttaggggg 158  Q
    ||||||||| |||| |||||| ||| |||| |||||||  ||||||| ||||||| | ||| ||| |||||||||||||||| || |||||| |||||||    
T  20224667 aaaataacacgtggtacctcatttagggtgccacgtcagcgtagacagagtcaaaattgtcattgagggccaaaactgccacaatacaaaacataggggg 20224766  T
Q  159 tggttttat 167  Q
     ||||||||    
T  20224767 gggttttat 20224775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 46912239 - 46912191
Alignment:
Q  188 ccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||||||||||||||||||||||  | |||||||||||||||||||    
T  46912239 ccaaaatcgcaacttcgtgaaagttaaggagcgaaaactgctattaaac 46912191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 46573083 - 46573138
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||  |||||||||||||||||| ||||||||||| | ||||||||||||||    
T  46573083 cttaggggaccaaaatcgcaacttcgtaaaagttagaggacaaaaactgctattaa 46573138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 1096717 - 1096763
Alignment:
Q  190 aaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||||||| |||||||||||||||| ||||||||||| |||||||    
T  1096717 aaaatcgcaatttcgtgaaagttagagagcgaaaactgcaattaaac 1096763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 15659063 - 15659227
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaa---------aagaaaataacatgtggcacctcacttaaggtgtcacg 95  Q
    ||||||||||||||| |||||||||||| ||||||   |||||||||||||||         || ||||||||| |||| |||||||||| |||||| ||    
T  15659063 taagttttgcaactggagcagttttggc-ccccaaagccaatttttggtaaaaaaaaacaataaaaaaataacacgtggaacctcacttagggtgtctcg 15659161  T
Q  96 tcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttaggggg 158  Q
    | || |||||   |||| |||||||||||| |||||||||  |||||  ||||||||||| |||||    
T  15659162 ttaacgtagatcgagtcaaaattggtcttgagggccaaaatcgccacatatgcaaaactttggggg 15659227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 42924385 - 42924331
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| | ||||||| ||||||||||||||||||||||| |||||| |||||||    
T  42924385 ttagggggtcaaaatcacaacttcgtgaaagttagagggcaaaaactactattaa 42924331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 7060711 - 7060849
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaaga--------aaataacatgtggcacctcacttaaggtgtcacgt 96  Q
    ||||||||||||||||| || ||||| | ||||||   ||||||||||||||||| |        |||||||| | ||||||||||||| |||| |||||    
T  7060711 taagttttgcaactgtaacaattttgaccccccaaagccaatttttggtaaaaaaaataataaacaaataacacgcggcacctcacttagggtgccacgt 7060810  T
Q  97 caatgtagacaaagtc-aaattggtcttgggggccaaaa 134  Q
    || |||||||  |||| |||||| ||||||| |||||||    
T  7060811 cagtgtagaccgagtcaaaattgatcttgggtgccaaaa 7060849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 11050430 - 11050478
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||||||    
T  11050430 gccaaaattgcaacttcgtgaaagttag-ggacgaaaactgctattaaac 11050478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 25085447 - 25085402
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||  |||||||||| |||||||||||||||||||    
T  25085447 caaaatcgcaactttatgaaagttagggggcgaaaactgctattaa 25085402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 50226529 - 50226633
Alignment:
Q  63 aataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaa-attggtcttgggggccaaaactgccaca--tgcaaaacttagggggt 159  Q
    ||||||| ||||||||||||||| |||| |||||||  ||||||  |||||| ||| | ||| |||||||||||||| |||  |||||||||||| |||     
T  50226529 aataacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaatattagccttcggggccaaaactgctacaggtgcaaaacttagagggc 50226628  T
Q  160 ggttt 164  Q
    |||||    
T  50226629 ggttt 50226633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 50401627 - 50401684
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||| |||||||||||||||||||||  ||| |||  |||||||||||||||||||||    
T  50401627 cttaaggagccaaaatcgcaacttcgaaaaaattaaggggcgaaaactgctattaaac 50401684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 1853494 - 1853447
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||||||||||||||||| ||| |  |||||||||||||||||||    
T  1853494 caaaatcgcaacttcgtgaaaattaaaacgcgaaaactgctattaaac 1853447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 5287324 - 5287400
Alignment:
Q  20 tagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    ||||||||||| | ||| || | |||||||||||||||||  ||||||||  |||||||||||||| |||| |||||||    
T  5287324 tagcagttttgacccccaaagaccaatttttggtaaaaaa--aaataacacttggcacctcacttagggtgccacgtca 5287400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 6320837 - 6320891
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| ||||||||||||||||| | |||||||| |||||||||||| ||||||    
T  6320837 cttagggggccaaaatcgcaacttcttaaaagttag-gggcgaaaactggtattaa 6320891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 7060675 - 7060628
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||||||||||| | ||||||| || |||||||||||||||||||    
T  7060675 caaaatcgcaacttcataaaagttaaagagcgaaaactgctattaaac 7060628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 14979064 - 14979111
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||| |||||||| |||||||||| ||||||||||| |||||||    
T  14979064 gccaaaattgcaacttcatgaaagttagggggcgaaaacttctattaa 14979111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 18216744 - 18216689
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| |||||||| | |||||| | ||||||||||||||||||||| ||||||    
T  18216744 cttagggggccaaaattgtaacttcataaaagttagagggcgaaaactgttattaa 18216689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 23220826 - 23220869
Alignment:
Q  188 ccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctat 231  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||    
T  23220826 ccaaaatcgtaacttcgtaaaagttagggggcgaaaactgctat 23220869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 46880786 - 46880739
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||||||||||||| ||| |||| | |||||||||||||||||||    
T  46880786 caaaatcgcaacttcgtaaaaattagggagcgaaaactgctattaaac 46880739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 6320812 - 6320759
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaa 59  Q
    |||||||||||||||||||||||| ||| ||| || | |||||||||||||||||    
T  6320812 taagttttgcaactgtagcagtttcggc-cccaaagaccaatttttggtaaaaaa 6320759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 37008274 - 37008220
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| ||||||||||||||||| |||||  ||| |||| ||||||||||||||    
T  37008274 ttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaa 37008220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 3377769 - 3377822
Alignment:
Q  181 tagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||| ||||||||| |||||| | ||||||||| |||| ||||||||||||||    
T  3377769 tagggggccaaaatcacaactttgggaaagttagggggctaaaactgctattaa 3377822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 6569613 - 6569658
Alignment:
Q  9 ttttgcaactgtagcagttttggcaccccaatatcaatttttggta 54  Q
    |||||||| ||||||||||||||| |||||| | ||||||||||||    
T  6569613 ttttgcaattgtagcagttttggccccccaaaaccaatttttggta 6569658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 8009779 - 8009730
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||||||||||||||  |||||| || ||| ||||||||||||||||    
T  8009779 gccaaaatcgcaacttcgaaaaagtttgaaggctaaaactgctattaaac 8009730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 140
Target Start/End: Complemental strand, 23356876 - 23356791
Alignment:
Q  56 aaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaa-attggtcttgggggccaaaactgcca 140  Q
    |||| ||||| ||| |||||||||||||||||||| ||||||| ||| |||  |||||| | ||| || |||| ||||||||||||    
T  23356876 aaaaaaaaatgacacgtggcacctcacttaaggtgccacgtcagtgttgaccgagtcaacaatggactgggggtccaaaactgcca 23356791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 23891797 - 23891854
Alignment:
Q  87 ggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccacat 143  Q
    ||||||||||||  ||||||  ||||||| ||||||||||| ||||||||||||||||    
T  23891797 ggtgtcacgtcagcgtagaccgagtcaaaattggtcttgggagccaaaactgccacat 23891854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 41997690 - 41997641
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||||||||||||| |||||| |||| |||| |||| |||||||||||    
T  41997690 gccaaaatcgcaactttgtgaaaattagggggcaaaaattgctattaaac 41997641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 165
Target Start/End: Complemental strand, 7579842 - 7579735
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggg 157  Q
    |||| |||||||||||||||||||| |||| || ||||  ||||||  |||| ||||| |  |||||||| |||| |||||||  |||||||||||| ||    
T  7579842 aaaaaaacatgtggcacctcacttagggtgccatgtcagcgtagaccgagtcaaaattagctttgggggcaaaaattgccacaagtgcaaaacttagcgg 7579743  T
Q  158 gtggtttt 165  Q
    | ||||||    
T  7579742 gcggtttt 7579735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 8301497 - 8301580
Alignment:
Q  77 cctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    ||||| ||| ||||||||||||  |||||   ||||||| ||||||||||||| ||||||||||||  |||||||| |||||||    
T  8301497 cctcaattagggtgtcacgtcagcgtagattgagtcaaaattggtcttgggggtcaaaactgccacagatgcaaaatttagggg 8301580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 13791761 - 13791717
Alignment:
Q  54 aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    |||||| ||| | ||| ||||||||||||||||||||||||||||    
T  13791761 aaaaaaaaaattgacacgtggcacctcacttaaggtgtcacgtca 13791717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 46880820 - 46880941
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaa---gaaaataacatgtggcacctcacttaaggtgtcacgtcaatg 101  Q
    |||||||| ||| ||||||| ||||||| ||| || |||||||||||||||||||    | |||||||  |||||| ||||||| |||| |||||||  |    
T  46880820 taagttttacaagtgtagcatttttggc-ccctaagatcaatttttggtaaaaaaaataataataacacatggcacatcacttagggtgccacgtcagcg 46880918  T
Q  102 tagacaaagtc-aaattggtctt 123  Q
    |||||  |||| |||||||||||    
T  46880919 tagaccgagtcgaaattggtctt 46880941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 44585874 - 44586099
Alignment:
Q  9 ttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaa 108  Q
    ||||||||||||||||||||| || |||||| | ||||||||||||||    |||||||||  |||||||||||||| |||| |||||||  ||||||      
T  44585874 ttttgcaactgtagcagttttcgccccccaagaccaatttttggtaaa----aaaataacacatggcacctcacttagggtgccacgtcagcgtagaccg 44585969  T
Q  109 agtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgt 205  Q
    |||| ||||||| | |||||||||||||||||||  | ||||||||||||||| |||||| |||         ||||||| |||||||||||||||| |     
T  44585970 agtcaaaattggccgtgggggccaaaactgccacagaagcaaaacttagggggcggttttgtag-ttttttttcttagggggccaaaatcgcaactttgg 44586068  T
Q  206 gaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||||| |||| ||||||||||||||||    
T  44586069 gaaagttagggggctaaaactgctattaaac 44586099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 43747360 - 43747523
Alignment:
Q  4 ataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgta 103  Q
    ||||||||||||| ||||||||||||||| |||||| | ||||||||||||||||| | ||||||| ||||||||||||||| | || |||||||  |||    
T  43747360 ataagttttgcaattgtagcagttttggccccccaagaccaatttttggtaaaaaa-ataataacacgtggcacctcacttaggatgccacgtcagcgta 43747458  T
Q  104 gacaaagtc-aaattggtcttgggggccaaaactgcc--acatgcaaaacttagggggtggtttt 165  Q
    |||  |||| |||||| || |||||||||||||||||  | ||||||||||||||||| ||||||    
T  43747459 gaccgagtcaaaattgatcgtgggggccaaaactgccataaatgcaaaacttagggggcggtttt 43747523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 44436471 - 44436641
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataa-------catgtggcacctcacttaaggtgtcacgtc 97  Q
    |||||||||||||||||||||||||||| ||||||   |||||| |||||||||| |||||||       || ||||||||||||||| |||| ||||||    
T  44436471 taagttttgcaactgtagcagttttggccccccaaggccaatttgtggtaaaaaataaaataaaaaataacacgtggcacctcacttagggtgccacgtc 44436570  T
Q  98 aatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    |  ||||||  |||| ||||||| |||||||||||||||||||||  ||||||||||||||||| ||||||    
T  44436571 agcgtagaccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggtttt 44436641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 234
Target Start/End: Original strand, 51315615 - 51315795
Alignment:
Q  56 aaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccaca--tgcaaaactt 152  Q
    |||| |||| |||| ||||||||||||||| |||| |||||||  ||||||  ||||||| |||| ||||||||||||||||||||||  ||||||||||    
T  51315615 aaaaaaaaaaaacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaggtgcaaaactt 51315714  T
Q  153 agggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| |||||| |||         ||||||| |||||||||||||||| | ||||||||| |||| ||||||||||||||    
T  51315715 agggggcggttttgtag-ttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 51315795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 12759590 - 12759681
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    |||||||||||||||||||||||||||| | ||||  |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  12759590 taagttttgcaactgtagcagttttggc-ctccaaagtcaatttttggtaaaaaa-aaaataacatgtggcacctcacttagggtgtcacgtca 12759681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 54719073 - 54719240
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggt----aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaat 100  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||||    ||||||||||| ||||  |||||||||||||| |||| |||||||      
T  54719073 taagttttgcaactgtagcagttttggccccccaaggtcaatttttggtaaaaaaaaaagaaaaaaacacttggcacctcacttagggtgccacgtcagc 54719172  T
Q  101 gtagacaaagtc-aaattggtcttgggggccaaaactg--ccacatgcaaaacttagggggtggtttt 165  Q
    ||||||  |||| |||||||  |||||||||||| |||   || ||||||||||||||||| ||||||    
T  54719173 gtagaccgagtcaaaattggcattgggggccaaacctggtacatatgcaaaacttagggggcggtttt 54719240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 154
Target Start/End: Complemental strand, 4474301 - 4474150
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||||| |||||| | |||||||| |||||||  |||||||||   | |||||||||| |||||||| ||||  ||||    
T  4474301 taagttttgcaactgtagcagttttggccccccaagaccaattttttgtaaaaagaaaaataacacacgacacctcactt-aggtgtcatgtcagcgtag 4474203  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttag 154  Q
    ||  | || ||||||||||| |||| ||||||||||||  |||||||||||||    
T  4474202 accgaatcaaaattggtcttaggggtcaaaactgccacaaatgcaaaacttag 4474150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 14856625 - 14856799
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaa-------gaaaataacatgtggcacctcacttaaggtgtca 93  Q
    |||||||||||||||||| ||| ||||||||| |||||||  |||||||||||||||||        ||||||||| ||||||| |||||||||||||||    
T  14856625 cccataagttttgcaactatagtagttttggccccccaatgccaatttttggtaaaaaaataatataaaaataacacgtggcacatcacttaaggtgtca 14856724  T
Q  94 cgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggtttt 165  Q
    |||||  ||||||  | || ||||||   |||||||||||||||| ||||  ||||||| ||||||| |||||||    
T  14856725 cgtcagcgtagaccgaatcaaaattgacattgggggccaaaactggcacatgtgcaaaatttaggggatggtttt 14856799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 54464394 - 54464241
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||| | ||||||||||| |||||||| || ||||||||||| |  ||||||||| | ||| |||||||||||||| ||||| |  ||||    
T  54464394 taagttttgcaactctggcagttttggccccccaatagcactttttggtaaaga--aaaataacacgcggcgcctcacttaaggtgccacgtgagcgtag 54464297  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    ||  |||| ||||||  |||||||| ||||||||||||  ||||||||||||||||    
T  54464296 accgagtcaaaattgaccttgggggtcaaaactgccacatatgcaaaacttagggg 54464241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 7218235 - 7218369
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||| ||||||||||||| | ||||   || ||||||||||||||   ||||||| ||||||||||||||||||||||||||||   |||    
T  7218235 taagttttgcaactatagcagttttggc-ctccaaggccattttttggtaaaaaa---aataacacgtggcacctcacttaaggtgtcacgtcagcatag 7218330  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccaca 142  Q
    |  ||||| ||||||  ||||||||||||||||||||||    
T  7218331 atcaagtcaaaattgaccttgggggccaaaactgccaca 7218369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 8024860 - 8025017
Alignment:
Q  8 gttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaa-----aataacatgtggcacctcacttaaggtgtcacgtcaatgt 102  Q
    ||||||||||||||||||||||||| ||||||   |||||||| |||||||| ||     |||||||||||| |||||| ||| | ||||||||||  ||    
T  8024860 gttttgcaactgtagcagttttggccccccaaagccaatttttagtaaaaaaaaataaaaaataacatgtggtacctcatttaggatgtcacgtcagcgt 8024959  T
Q  103 agacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    ||||  ||| ||| |||||||||| |||||||||| ||||  ||||||||||||||||    
T  8024960 agaccgagttaaaattggtcttggaggccaaaactaccacatatgcaaaacttagggg 8025017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 33329753 - 33329852
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    ||||||||| ||||||||||||||| |||| |||||||  ||||||  ||||||| ||||||||||||||||||||||||||  |||||| |||||||||    
T  33329753 aaaataacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggtcttgggggccaaaactgccacaaatgcaatacttagggg 33329852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 47189730 - 47189825
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaactta 153  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||||| ||||| |||||| ||||| ||| ||||||||||||  ||||||||||||    
T  47189730 aaaataacacgtgacacctcacttaaggtgtcacgtcagtgtagacgaagtcaaaattgatcttgagggtcaaaactgccacaaatgcaaaactta 47189825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 36677581 - 36677527
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  36677581 ttagggagccaaaatcgcaacttcgtgaaagttagcgggcgaaaactgttattaa 36677527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 36687663 - 36687609
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  36687663 ttagggagccaaaatcgcaacttcgtgaaagttagcgggcgaaaactgttattaa 36687609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 19404525 - 19404614
Alignment:
Q  56 aaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccacatg 144  Q
    |||| ||||||||| ||||||||||||||| |||||||||| |  |||||| ||||| ||||||| ||||||||||||||||| ||||||    
T  19404525 aaaataaaataacacgtggcacctcacttagggtgtcacgttagcgtagactaagtcaaaattggccttgggggccaaaactgtcacatg 19404614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 1814631 - 1814789
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaa-------ataacatgtggcacctcacttaaggtgtcacgtc 97  Q
    |||||||||||||| |||||||||| || ||||||   ||||||||||||||||| |||       |||||| ||||||||||||||| |||| ||||||    
T  1814631 taagttttgcaactatagcagtttttgc-ccccaaggccaatttttggtaaaaaaaaaataaaaaaataacacgtggcacctcacttagggtgccacgtc 1814729  T
Q  98 aatgtagacaaagtc-aaattggtctt-gggggccaaaactgccacatgcaaaacttagggg 157  Q
    |  ||||||  |||| |||||| |||| |||||||||||||||  |||||||||||||||||    
T  1814730 agcgtagaccgagtcaaaattgatcttagggggccaaaactgc--catgcaaaacttagggg 1814789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 14856604 - 14856549
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||| |||||||||||||||||||||||||| | |||||||||||||||||    
T  14856604 cttagggagtcaaaatcgcaacttcgtgaaagttagggtgcgaaaactgctattaa 14856549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 17773228 - 17773173
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  17773228 cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaa 17773173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 19074529 - 19074474
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  19074529 cttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaa 19074474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 28712693 - 28712532
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaa-------agaaaataacatgtggcacctcacttaaggtgtcacgtc 97  Q
    ||||||||||||||||||||||||||  ||||||    ||||||||||||||||       | ||| ||||| ||||||||||||||| |||| ||||||    
T  28712693 taagttttgcaactgtagcagttttg--accccagggacaatttttggtaaaaataaaattaaaaagtaacacgtggcacctcacttagggtgccacgtc 28712596  T
Q  98 aatgtagacaaagtcaaa-ttggtcttgggggccaaaactgc--cacatgcaaaacttaggggg 158  Q
    | |||||||  ||||||| |||| |||||| || ||||||||  || |||||||||||||||||    
T  28712595 agtgtagaccgagtcaaagttggccttgggtgctaaaactgctacagatgcaaaacttaggggg 28712532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 33329669 - 33329614
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||    
T  33329669 cttagggggtcaaaatcgcaacttcgtaaaagttagagggcgaaaactgctattaa 33329614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 3193013 - 3192897
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaa------gaaaataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    ||||||||||||||||| |||||||||| ||||||  ||||||||||||||||||       | ||||||||||||||||||||||| |||| || || |    
T  3193013 taagttttgcaactgtaacagttttggccccccaaggtcaatttttggtaaaaaatataataataataacatgtggcacctcacttagggtgccatgtta 3192914  T
Q  99 atgtagacaaagtcaaa 115  Q
     |||||||  |||||||    
T  3192913 gtgtagaccgagtcaaa 3192897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 14340812 - 14340969
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaat 100  Q
    |||| ||||||||||| |||||||||||||||  |||||   ||||||||||||||||  |||||||||  || ||||||||||||  || || || |      
T  14340812 cccacaagttttgcaattgtagcagttttggcctcccaaagccaatttttggtaaaaa--aaaataacacatgacacctcacttaacctgccatgttagc 14340909  T
Q  101 gtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    ||||||  |||| ||||| |  ||||||||||||||||||||  ||||||||||||||||    
T  14340910 gtagaccgagtcaaaattagcgttgggggccaaaactgccacaaatgcaaaacttagggg 14340969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 43747337 - 43747280
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  43747337 cttagggggccaaaatcgcaacttcgtaaaagttataggacgaaaactgctattaaac 43747280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 52008479 - 52008368
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaa---ataacatgtggcacctcacttaaggtgtcacgtcaatg 101  Q
    |||||||||||||| |||||||||||  ||| ||| | ||||||||||||||||| |||   |||||| ||| ||||||||||| ||||||||||||  |    
T  52008479 taagttttgcaactatagcagttttg--acctcaaaaccaatttttggtaaaaaaaaaataaataacacgtgacacctcacttagggtgtcacgtcagcg 52008382  T
Q  102 tagacaaagtcaaa 115  Q
    |||||  |||||||    
T  52008381 tagaccgagtcaaa 52008368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 247
Target Start/End: Original strand, 44433253 - 44433390
Alignment:
Q  113 aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttaggga-gccaaaatcgcaacttcgtgaaa 209  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||| |||||| |||         |||||||| ||| |||||||||||  |  |||    
T  44433253 aaattggccttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtagtttttttttcttagggaggccgaaatcgcaactgtggaaaa 44433352  T
Q  210 gttagagggcgaaaactgctattaaacttatttattaa 247  Q
    ||||| |||| |||||||||||||| | ||||| ||||    
T  44433353 gttagggggctaaaactgctattaagcctatttcttaa 44433390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 3916612 - 3916511
Alignment:
Q  56 aaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaactt 152  Q
    |||| ||||||||| ||||||||||||||| |||| ||||| | |||||||  |||| ||||||   ||||||||||||||||||||  |||||||||||    
T  3916612 aaaataaaataacacgtggcacctcacttagggtgccacgttagtgtagaccgagtcaaaattgactttgggggccaaaactgccacagatgcaaaactt 3916513  T
Q  153 ag 154  Q
    ||    
T  3916512 ag 3916511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 25154412 - 25154322
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    |||||||||||||||||||||||||||| ||||||   ||||| |||| ||| || |||| ||||  ||||||||||||||||||| |||||||    
T  25154412 taagttttgcaactgtagcagttttggccccccaaggccaattattgg-aaagaaaaaaaaaaca--tggcacctcacttaaggtgccacgtca 25154322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 25248949 - 25249007
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaacttatttatt 245  Q
    ||||||||||||||||||||||| ||| ||||||||||||  |||||||||||| ||||    
T  25248949 gccaaaatcgcaacttcgtgaaaattaaagggcgaaaactattattaaacttatatatt 25249007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 28204537 - 28204483
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| | |||||||||||||||||||||||||  |||||||||||||||||||    
T  28204537 ttagggggtcaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaa 28204483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 46226944 - 46226998
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| | |||||||||||||||||||||||||| || ||||||||||||||||    
T  46226944 ttagggggtcaaaatcgcaacttcgtgaaagttaggggacgaaaactgctattaa 46226998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 48348304 - 48348258
Alignment:
Q  188 ccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||    
T  48348304 ccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 48348258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 44624861 - 44624703
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaa-----aataacatgtggcacctcacttaaggtgtcacgtcaa 99  Q
    |||||||||||||||||||||||| ||| | ||||  |||||||||||||||||| ||     |||||||  || ||||||||||| |||| |||||||     
T  44624861 taagttttgcaactgtagcagtttcggc-ctccaaggtcaatttttggtaaaaaaaaataaataataacacatgtcacctcacttagggtgccacgtcag 44624763  T
Q  100 tgtagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
     ||||||  ||||||| |||| ||||||  |||||||||||||  ||||||||| ||||||    
T  44624762 cgtagaccgagtcaaaattggccttggga-ccaaaactgccacagatgcaaaacatagggg 44624703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 54719042 - 54718997
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||||||||||||||||| || ||||||||||||||||    
T  54719042 caaaatcgcaacttcgtgaaagttagtggacgaaaactgctattaa 54718997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 169
Target Start/End: Complemental strand, 86751 - 86640
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggg 157  Q
    ||||||||| ||||||||||||||| |||  || ||||  |||||   |||| |||||||||||||||||||||||||| |||  ||||||||||||||     
T  86751 aaaataacacgtggcacctcacttagggtcccatgtcagcgtagatcgagtcaaaattggtcttgggggccaaaactgctacaagtgcaaaacttagggc 86652  T
Q  158 gtggttttatag 169  Q
    |  |||||||||    
T  86651 gcagttttatag 86640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 4474324 - 4474380
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||| ||||||||||||||||||| ||||||||  || |||||||||||||||||    
T  4474324 ttagggggccaaaatcgcaacttcgtaaaagttaggaggagaaaactgctattaaac 4474380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 14349375 - 14349419
Alignment:
Q  190 aaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||||||| |||||||| |||||||||||||||||||    
T  14349375 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaa 14349419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 156
Target Start/End: Original strand, 36677627 - 36677745
Alignment:
Q  43 caatttttggtaaaaaagaaa--ataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgcc 139  Q
    ||||||||||||||||| |||  |||||| |||||||||||||||||||| |||||||  ||| ||  |||| ||||||  ||||| |||||||| ||||    
T  36677627 caatttttggtaaaaaaaaaataataacacgtggcacctcacttaaggtgccacgtcagcgtaaaccgagtcaaaattgaccttggaggccaaaattgcc 36677726  T
Q  140 ac--atgcaaaacttaggg 156  Q
    ||  ||||||| |||||||    
T  36677727 acaaatgcaaatcttaggg 36677745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 86820 - 86875
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| ||||||||||||||||| |||||||||| || |||||||| |||||||    
T  86820 cttagggggccaaaatcgcaacttcatgaaagttaggggacgaaaactcctattaa 86875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 3193037 - 3193092
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| | ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  3193037 cttagggggtcaaaatcgcaacttcttgaaagttagggggtgaaaactgctattaa 3193092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 158
Target Start/End: Complemental strand, 25843541 - 25843443
Alignment:
Q  63 aataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttaggggg 158  Q
    ||||||| |||||||||| |||| |||| |||||||  ||||||   |||||| |||| ||||||| |||||||||||||  |||||||||||||||||    
T  25843541 aataacacgtggcacctcgcttagggtgccacgtcagcgtagactgggtcaaaattggccttggggaccaaaactgccacagatgcaaaacttaggggg 25843443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 25902609 - 25902664
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||||||||||||||| | ||||||||| |||| ||||||| ||||||    
T  25902609 cttagggagccaaaatcgcaactttgagaaagttagggggctaaaactgatattaa 25902664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 27178288 - 27178390
Alignment:
Q  66 aacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggt 162  Q
    |||||||| |||||||| || |||| ||| |||  |||||| |||||||| ||||  ||||||| ||||||| |||||  ||||||||||||||||||||    
T  27178288 aacatgtgacacctcacgtagggtgacacatcagcgtagaccaagtcaaaattggcattgggggtcaaaactaccacagatgcaaaacttagggggtggt 27178387  T
Q  163 ttt 165  Q
    |||    
T  27178388 ttt 27178390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 28712717 - 28712772
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| ||||||||| ||||||| | |||||||| |||||||||||||||||||    
T  28712717 cttagggggccaaaatcacaacttcataaaagttagggggcgaaaactgctattaa 28712772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 35359179 - 35359295
Alignment:
Q  119 gtcttgggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagag 216  Q
    |||||||||||||||||||||| |  |||||||||||| ||| | |||| |||         ||||||| ||||||||  ||||||||||||||||||||    
T  35359179 gtcttgggggccaaaactgccatagttgcaaaacttagagggcgattttgtagtttgtttttcttaggg-gccaaaattacaacttcgtgaaagttagag 35359277  T
Q  217 ggcgaaaactgctattaa 234  Q
    || ||||||| |||||||    
T  35359278 ggtgaaaactactattaa 35359295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 36687709 - 36687764
Alignment:
Q  43 caatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    ||||||||||||||||| | ||||||| ||||||||||||||| |||| |||||||    
T  36687709 caatttttggtaaaaaaaataataacacgtggcacctcacttagggtgccacgtca 36687764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 38957971 - 38957917
Alignment:
Q  113 aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||| ||||||    
T  38957971 aaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggtttt 38957917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 14340782 - 14340736
Alignment:
Q  188 ccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  14340782 ccaaaatcgtaacttcgtgaaagttagggggcgaaaactcctattaa 14340736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 20432320 - 20432402
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca 142  Q
    ||||||||| ||||||||||||||| ||||  ||||||  |||||| ||||| ||||||  |||||||| |||||||||||||    
T  20432320 aaaataacacgtggcacctcacttagggtgctacgtcagcgtagaccaagtcaaaattgtccttgggggtcaaaactgccaca 20432402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 25902488 - 25902538
Alignment:
Q  9 ttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaa 59  Q
    ||||||||||||| |||||||||| |||||| | |||||||||||||||||    
T  25902488 ttttgcaactgtaacagttttggccccccaagaccaatttttggtaaaaaa 25902538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 14992704 - 14992843
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaa-------aaagaaaataacatgtggcacctcacttaaggtgtcacgtc 97  Q
    |||||||||||||||||||||||||||| ||  ||   ||||||||||||||       ||| |||| || |||||||||||||||||||||| || |||    
T  14992704 taagttttgcaactgtagcagttttggccccttaaggccaatttttggtaaaaaaaaacaaaaaaaaaaaaatgtggcacctcacttaaggtgccatgtc 14992803  T
Q  98 aatgtagacaaagtc-aaattggtcttgggggccaaaact 136  Q
    |  ||||||  |||| ||||||  |||||||| |||||||    
T  14992804 agcgtagactgagtcaaaattgaccttgggggacaaaact 14992843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 38958109 - 38958154
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||| || |||||||||||||| |||||||||||||||||||    
T  38958109 caaaatcgtaatttcgtgaaagttagggggcgaaaactgctattaa 38958154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 19404445 - 19404401
Alignment:
Q  190 aaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||    
T  19404445 aaaatcgcaacttcgtgaaagttaggggacgaaaactgttattaa 19404401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 27178186 - 27178134
Alignment:
Q  191 aaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaacttattta 243  Q
    ||||||||||||||| |||||||| || |||||||||||||||| ||| ||||    
T  27178186 aaatcgcaacttcgtaaaagttaggggacgaaaactgctattaagctttttta 27178134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 53184784 - 53184828
Alignment:
Q  190 aaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||||||| |||||||| | |||||||||||||||||    
T  53184784 aaaatcgcaacttcgtaaaagttagggagcgaaaactgctattaa 53184828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 20432248 - 20432193
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||  ||||| |||||||||||| |||||||| |||| ||||||||||||||    
T  20432248 cttaggggaccaaagtcgcaacttcgtaaaagttagggggcaaaaactgctattaa 20432193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 157
Target Start/End: Original strand, 578551 - 578648
Alignment:
Q  63 aataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccaca--tgcaaaacttagggg 157  Q
    ||||||| |||||||||| |||| |||| |||||||   |||||  ||||||| |||| |||||||||||||||| |||||  || ||||||||||||    
T  578551 aataacacgtggcacctcgcttagggtgccacgtcagcatagaccgagtcaaaattggccttgggggccaaaactaccacaggtgaaaaacttagggg 578648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 7218411 - 7218477
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaacttatttatt 245  Q
    ||||||||||||||||||||||||    ||| |||| |||| |||| ||||||||||| ||||||||    
T  7218411 cttagggagccaaaatcgcaactttaaaaaaattagggggctaaaattgctattaaacctatttatt 7218477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 44433107 - 44433058
Alignment:
Q  184 ggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||| |||||||||||||||||| ||| ||||| |||||||||    
T  44433107 ggagccaaaatcacaacttcgtgaaagttag-gggtgaaaattgctattaa 44433058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 47189655 - 47189601
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| ||||||||||||||||| | |||||||| | |||||||||| ||||||    
T  47189655 ttagggggccaaaatcgcaacttcataaaagttagggagcgaaaactgttattaa 47189601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 48348337 - 48348494
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataa---catgtggcacctcacttaaggtgtcacgtcaatg 101  Q
    ||||||||||||||| || |||||||||   ||||   ||||||||||||||||| |||| ||   || |||||||||||||||  ||| |||||||  |    
T  48348337 taagttttgcaactgcagtagttttggccttccaagc-caatttttggtaaaaaaaaaaaaaaaaacacgtggcacctcacttagcgtgccacgtcagcg 48348435  T
Q  102 tagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttaggggg 158  Q
    |||||  |||| ||||||| ||| |||| ||||||||||||  |||||||||||| ||||    
T  48348436 tagaccgagtcaaaattgggctt-ggggtcaaaactgccacatatgcaaaacttaagggg 48348494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 53020576 - 53020530
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcg-aaaactgctattaa 234  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||||||    
T  53020576 caaaatcgcaatttcgtgaaagttagagagcgaaaaactgctattaa 53020530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 142
Target Start/End: Complemental strand, 53184744 - 53184605
Alignment:
Q  10 tttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaa-------aagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgt 102  Q
    |||||||||| |||||||||||| ||||||   |||||||||||||||       || ||||||||| ||| ||| ||||||| ||||||| ||||  ||    
T  53184744 tttgcaactgaagcagttttggccccccaaagccaatttttggtaaaaaaaaattaaaaaaataacacgtgacacatcacttagggtgtcaagtcagcgt 53184645  T
Q  103 agacaaagtc-aaattggtcttgggggccaaaactgccaca 142  Q
    ||||  |||| |||||||| |||| || |||||||||||||    
T  53184644 agaccgagtcaaaattggttttggagg-caaaactgccaca 53184605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 25843593 - 25843650
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||| || |||||||||  ||||| |||||||| | |||||||||||||||||||    
T  25843593 cttagggggctaaaatcgcacattcgtaaaagttagggcgcgaaaactgctattaaac 25843650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 51315577 - 51315610
Alignment:
Q  5 taagttttgcaactgtagcagttttggcacccca 38  Q
    |||||||||||||||||||||||||||| |||||    
T  51315577 taagttttgcaactgtagcagttttggcccccca 51315610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 19914661 - 19914617
Alignment:
Q  54 aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    |||||| ||||| ||| |||||||||||||||||||| |||||||    
T  19914661 aaaaaaaaaaatgacacgtggcacctcacttaaggtgccacgtca 19914617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 28944153 - 28944106
Alignment:
Q  113 aaattggtcttgggggccaaaactgccaca--tgcaaaacttaggggg 158  Q
    ||||||| |||||||||||||||||| |||  ||||||||||||||||    
T  28944153 aaattggccttgggggccaaaactgctacatgtgcaaaacttaggggg 28944106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 37182134 - 37182214
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaa-attggtcttgggggccaaaactgcca 140  Q
    ||||| ||| ||||||||||||||| ||||||||||||  || ||| ||||||| | ||| || |||| ||||||||||||    
T  37182134 aaaatgacacgtggcacctcacttagggtgtcacgtcagcgttgaccaagtcaacaatggactgggggtccaaaactgcca 37182214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 233
Target Start/End: Original strand, 10727273 - 10727504
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggta-aaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgta 103  Q
    |||||||||||||||||||||||||||| ||||||   |||||||||| | ||||| |||| ||||||||||| |||||||| |||  |||||||  |||    
T  10727273 taagttttgcaactgtagcagttttggccccccaaggccaatttttggaagaaaaaaaaaaaaacatgtggcatctcacttagggtcccacgtcagcgta 10727372  T
Q  104 gacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaac 200  Q
    ||  ||||| ||||||| |||||||||||||||||||||  ||||||||||||||||| |||||| |||         ||||||| ||||||||| ||||    
T  10727373 gatcaagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtag-ttttttttcttagggggccaaaatcacaac 10727471  T
Q  201 ttcgtgaaagttagagggcgaaaactgctatta 233  Q
    || |  |||||||| |||| |||||||||||||    
T  10727472 tttggaaaagttagggggctaaaactgctatta 10727504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 3 - 234
Target Start/End: Complemental strand, 30349588 - 30349352
Alignment:
Q  3 cataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaag-----aaaataacatgtggcacctcacttaaggtgtcacgtc 97  Q
    |||||||||||||||||||||||||| ||  ||||||   |||||||||||||||||      ||||||||||||||||||||||||| |||| ||||||    
T  30349588 cataagttttgcaactgtagcagtttcggt-ccccaaggccaatttttggtaaaaaaatataaaaaataacatgtggcacctcacttagggtgccacgtc 30349490  T
Q  98 aatgtagacaaagtca-aattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaat 194  Q
    || ||||||  ||||| |||||| |||||||| ||||||| ||||  |||||||||||| |||| |||||| |||         |||||||   ||||||    
T  30349489 aacgtagaccgagtcataattggccttgggggtcaaaactaccacagatgcaaaacttaaggggcggttttgtag--tttttttcttaggggctcaaaat 30349392  T
Q  195 cgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||| | |||||||||||||| ||||||||||||||    
T  30349391 cgcaactttgggaaagttagagggctaaaactgctattaa 30349352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 18031016 - 18031154
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaa------aaagaaaataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    |||||||||||||||||||| ||||||| ||||||  ||||||| |||||||      ||| ||||||||| ||| ||||||||||| |||| |||||||    
T  18031016 taagttttgcaactgtagcaattttggctccccaaagtcaatttatggtaaaacaaataaaaaaaataacaagtgacacctcacttagggtgccacgtca 18031115  T
Q  99 atgtagacaaagtc-aaattggtcttgggggccaaaact 136  Q
      |||||| ||||| |||||| ||||| |||||||||||    
T  18031116 gcgtagaccaagtcaaaattgatcttgagggccaaaact 18031154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 165
Target Start/End: Complemental strand, 32143435 - 32143329
Alignment:
Q  62 aaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccaca--tgcaaaacttaggggg 158  Q
    |||||||||||| |||||||||||  ||| ||| |||| ||||||  ||||||| |||||||||||||||||||||||||||  ||||||||||| ||||    
T  32143435 aaataacatgtgccacctcacttagagtgccacatcaacgtagaccgagtcaaaattggtcttgggggccaaaactgccacaggtgcaaaacttaagggg 32143336  T
Q  159 tggtttt 165  Q
     ||||||    
T  32143335 cggtttt 32143329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 12766404 - 12766525
Alignment:
Q  113 aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaag 210  Q
    ||||||| |||||||||||||||||| |||  ||||||||||| |||| |||||| |||          |||||| ||||||||||||||||||||||||    
T  12766404 aaattggccttgggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagtttttttt--ttagggggccaaaatcgcaacttcgtgaaag 12766501  T
Q  211 ttagagggcgaaaactgctattaa 234  Q
    |||| ||| |||||||||||||||    
T  12766502 ttagggggtgaaaactgctattaa 12766525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 165
Target Start/End: Original strand, 26311480 - 26311647
Alignment:
Q  8 gttttgcaactgtagcagtttt---ggcaccccaatatcaatttttggtaaaaaa-gaaaataa---catgtggcacctcacttaaggtgtcacgtcaat 100  Q
    ||||||||| ||||||||||||   ||| |||||| | |||||| ||| |||||| ||||||||   || ||||||||||||||| | || |||||||      
T  26311480 gttttgcaattgtagcagtttttttggccccccaaaaccaatttctggcaaaaaaagaaaataaatacacgtggcacctcacttaggatgccacgtcagc 26311579  T
Q  101 gtagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    ||||||  ||||||| |||  |||||||||||||||||||||  |||||||||||| |||||||||||    
T  26311580 gtagaccgagtcaaaattgaccttgggggccaaaactgccacatatgcaaaacttaaggggtggtttt 26311647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 12766446 - 12766355
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaa 99  Q
    |||||||||||||||||||||||||||| ||||||   ||||||||| ||||||  ||||||||| |||||||||||||||  ||| ||||||||    
T  12766446 taagttttgcaactgtagcagttttggc-ccccaaggccaatttttgataaaaa--aaaataacacgtggcacctcacttagagtgccacgtcaa 12766355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 33401286 - 33401232
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaa 59  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||||||||    
T  33401286 taagttttgcaactgtagcagttttggccccccaagaccaatttttggtaaaaaa 33401232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 5003215 - 5003315
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaag-tcaaattggtcttgggggccaaaactgccaca--tgcaaaacttagggg 157  Q
    ||||||||||||| ||||||||||| ||||||||||||  |||||| ||| | ||||||   ||||| |||||||||||||||  |||||||||||||||    
T  5003215 aaaataacatgtgacacctcacttagggtgtcacgtcagcgtagaccaagttaaaattgacattgggagccaaaactgccacaattgcaaaacttagggg 5003314  T
Q  158 g 158  Q
    |    
T  5003315 g 5003315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 6036769 - 6036647
Alignment:
Q  113 aaattggtcttgggggccaaaactgccacat--gcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaag 210  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||| | ||||| ||          ||||||| | |||||||||||||||||| |||    
T  6036769 aaattggccttgggggccaaaactgccacatatgcaaaacttaggggatagttttgta-actttttttcttagggggtcaaaatcgcaacttcgtggaag 6036671  T
Q  211 ttagagggcgaaaactgctattaa 234  Q
    || | |||||||||||||||||||    
T  6036670 tttgcgggcgaaaactgctattaa 6036647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 6036799 - 6036895
Alignment:
Q  64 ataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    |||||||||||||||||||||| ||||||||||||   || || ||||| |||||||  ||||||| ||||||||||||  ||||||||||||||||    
T  6036799 ataacatgtggcacctcacttagggtgtcacgtcagcataaaccaagtcaaaattggctttgggggtcaaaactgccacatatgcaaaacttagggg 6036895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 1377439 - 1377356
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaata-tcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtg 90  Q
    ||||||||||||||||| |||||||||| |||| |||  |||||||||||||||   ||||| ||||||||||||||||||| ||||    
T  1377439 taagttttgcaactgtaacagttttggcccccccatagccaatttttggtaaaa---aaaatgacatgtggcacctcacttagggtg 1377356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 1385187 - 1385104
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaata-tcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtg 90  Q
    ||||||||||||||||| |||||||||| |||| |||  |||||||||||||||   ||||| ||||||||||||||||||| ||||    
T  1385187 taagttttgcaactgtaacagttttggcccccccatagccaatttttggtaaaa---aaaatgacatgtggcacctcacttagggtg 1385104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 2840872 - 2840924
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaa 57  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||    
T  2840872 taagttttgcaattgtagcagttttggccccccaatgtcaatttttggtaaaa 2840924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 17248872 - 17248707
Alignment:
Q  6 aagttttgcaactgtagcagttttggcaccccaatatcaatttttggt---aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgt 102  Q
    ||||||||||| ||||||||||||||| ||||||   |||||| || |   |||||| ||||||||| | || |||||||||| |||| |||||||| ||    
T  17248872 aagttttgcaattgtagcagttttggccccccaaagccaatttatgataaaaaaaaaaaaaataacacggggtacctcacttagggtgccacgtcaacgt 17248773  T
Q  103 agacaaagtc-aaattggtcttgggggccaaaactg--ccacatgcaaaacttagggggtggtttt 165  Q
    ||||  | || |||||||||||  ||||||||||||   || ||||||||||||| ||| ||||||    
T  17248772 agaccgaatcaaaattggtcttaagggccaaaactgtcgcagatgcaaaacttagagggcggtttt 17248707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 33401310 - 33401364
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  33401310 ttagggagccaaaatcgtaacttcgtaaaagttagggggtgaaaactgctattaa 33401364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 238978 - 238933
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||    
T  238978 caaaatcgcaacttcgtgaaaattagggggcgaaaactgctattaa 238933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 1377470 - 1377519
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  1377470 gccaaaatcgcaacttcgtgaaagttaggggacgaaaactgatattaaac 1377519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 1385218 - 1385267
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  1385218 gccaaaatcgcaacttcgtgaaagttaggggacgaaaactgatattaaac 1385267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 28011390 - 28011435
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||    
T  28011390 caaaatcgcaacttcgtgaaagttagggggtgaaaactgctattaa 28011435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 3579645 - 3579598
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||    
T  3579645 gccaaaatcgcaacttcgtgaaagttaagggacgaaaactgctattaa 3579598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 18030987 - 18030944
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgcta 230  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  18030987 gccaaaatcgcaacttcgtgaaagttagggggagaaaactgcta 18030944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 266242 - 266354
Alignment:
Q  55 aaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaact 151  Q
    ||||| ||||||||| ||| ||||||||||| | ||||||||||  ||||||  | || |||||||| || ||||||||||||||||||  |||||||||    
T  266242 aaaaataaaataacacgtgacacctcacttaggatgtcacgtcagcgtagaccgaatcaaaattggt-tttggggccaaaactgccacaggtgcaaaact 266340  T
Q  152 tagggggtggtttt 165  Q
    || |||| ||||||    
T  266341 taaggggcggtttt 266354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 2840838 - 2840784
Alignment:
Q  188 ccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaacttattt 242  Q
    ||||||||||||||| || |||||| ||| ||||||||||||||||| |||||||    
T  2840838 ccaaaatcgcaactttgtaaaagttggagagcgaaaactgctattaagcttattt 2840784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 12799057 - 12799105
Alignment:
Q  188 ccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||||||||||||| |||||  |||||||| ||||||||||||||||    
T  12799057 ccaaaatcgcaacttcttgaaatatagagggctaaaactgctattaaac 12799105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 2853510 - 2853568
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaa 64  Q
    |||||||||||||||||||||||||||  ||||||   ||||||||||||||||| ||||    
T  2853510 taagttttgcaactgtagcagttttgg-tccccaaggccaatttttggtaaaaaaaaaaa 2853568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 2853604 - 2853658
Alignment:
Q  113 aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    ||||||| |||||||||||||||||||||  ||| ||||||||||||| ||||||    
T  2853604 aaattggccttgggggccaaaactgccacatatgaaaaacttagggggcggtttt 2853658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 3812917 - 3812820
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttaggg 156  Q
    |||||||||  | |||||||||||| |||| |||||||  ||||||   |||||| |||||||||||| |||||||||||||  |||||||||||||||    
T  3812917 aaaataacacatagcacctcacttagggtgccacgtcagcgtagaccgggtcaaaattggtcttgggg-ccaaaactgccacatatgcaaaacttaggg 3812820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 5003147 - 5003092
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| || ||||||||||||||| | |||||||| |||||||||||| ||||||    
T  5003147 cttaggaagtcaaaatcgcaacttcttaaaagttagggggcgaaaactgttattaa 5003092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 26601585 - 26601531
Alignment:
Q  113 aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggtttt 165  Q
    ||||||||||||||| ||||| ||| ||||  |||||||||||||||||||||||    
T  26601585 aaattggtcttggggaccaaagctgtcacagatgcaaaacttagggggtggtttt 26601531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 26601727 - 26601769
Alignment:
Q  191 aaatcgcaacttcgtgaaagttagagggcgaaaactgctatta 233  Q
    ||||||||||||||||||||||||  ||| |||||||||||||    
T  26601727 aaatcgcaacttcgtgaaagttaggaggcaaaaactgctatta 26601769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 2853552 - 2853435
Alignment:
Q  113 aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaag 210  Q
    ||||||| ||||||| |||||||||| |||  |||||||||||||||  |||||| |||         ||||||| || |||||||||||||||||||||    
T  2853552 aaattggccttggggaccaaaactgctacagttgcaaaacttaggggacggttttgtagtttttt---cttagggggcgaaaatcgcaacttcgtgaaag 2853456  T
Q  211 tta-gagggcgaaaactgcta 230  Q
    ||| | ||| |||||||||||    
T  2853455 ttatgggggtgaaaactgcta 2853435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 3813000 - 3813048
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgct 229  Q
    ||||| |||||||||||||||||| ||||||||||| | |||||||||||    
T  3813000 ttaggaagccaaaatcgcaacttcttgaaagttaga-gacgaaaactgct 3813048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 30349612 - 30349677
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaacttatttat 244  Q
    ||||||| |||||||||||||||| |  |||||||| || | |||||||||||||| | |||||||    
T  30349612 cttagggggccaaaatcgcaactttgaaaaagttaggggacaaaaactgctattaagcctatttat 30349677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 10582155 - 10582206
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctatt 232  Q
    |||||| ||||||||||||||||| |||||  ||| |||||||||||||||||    
T  10582155 ttagggggccaaaatcgcaacttcttgaaatatag-gggcgaaaactgctatt 10582206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 20853610 - 20853381
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataa-catgtggcacctcacttaaggtgtcacgtcaatgta 103  Q
    ||||||||| |||||||||| ||||||| |||||| | ||||||||||||||||| |||| || || ||||||||||| ||  |||| |||||||| |||    
T  20853610 taagttttgtaactgtagcaattttggc-ccccaaaaccaatttttggtaaaaaaaaaaaaaaacacgtggcacctcattttgggtgccacgtcaacgta 20853512  T
Q  104 gacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaac 200  Q
    ||   | || |||||| ||||||||||||||||||||||  |||||||||||||||||||||||| |||          |||||| | ||||||||||||    
T  20853511 gatctattcaaaattgatcttgggggccaaaactgccacatatgcaaaacttagggggtggttttgtagttttttt---ttagggggtcaaaatcgcaac 20853415  T
Q  201 ttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||  ||||||||| |||| ||||||||||||||    
T  20853414 ttcaagaaagttagggggctaaaactgctattaa 20853381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 234
Target Start/End: Original strand, 30539071 - 30539301
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||| ||||||||||||||||||| ||||||   ||||||||||||||||| |||| |||| ||||||||||||||| |||| |||||||   |||    
T  30539071 taagttttacaactgtagcagttttggccccccaaggccaatttttggtaaaaaaaaaaaaaacacgtggcacctcacttagggtgccacgtcagcatag 30539170  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaact 201  Q
    ||  | || ||||||   ||||||||||||||||||||  ||||||||||||||||  |||||| |||         |||||||  ||||||||||||||    
T  30539171 accgaatcaaaattgacattgggggccaaaactgccacagatgcaaaacttaggggacggttttgtag-ttttttttcttaggggaccaaaatcgcaact 30539269  T
Q  202 tcgtgaaagttagagggcgaaaactgctattaa 234  Q
    | | |||||||| ||||| ||||||||||||||    
T  30539270 ttgggaaagtta-agggctaaaactgctattaa 30539301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 6807254 - 6807412
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||  |||||||   ||| ||| ||||||||||||||| |||| |||||||  ||||    
T  6807254 taagttttgcaactgtagcagttttg--accccaagatcaattttttataaaaaa---aattacacgtggcacctcacttagggtgccacgtcagcgtag 6807348  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    ||| |||| ||||||  |||| ||| ||||||||||||  ||||||||||||||||||||||||    
T  6807349 acagagtcaaaattgaccttgagggacaaaactgccacaaatgcaaaacttagggggtggtttt 6807412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 45177443 - 45177280
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaag----aaaataacatgtggcacctcacttaaggtgtcacgt 96  Q
    |||||||||||||||||||||| |||||||||  |||||   ||||||||||||||||||    ||||||||||||| ||||||||||| |||| |||||    
T  45177443 cccataagttttgcaactgtagtagttttggcctcccaaagccaatttttggtaaaaaagaataaaaataacatgtgacacctcacttagggtgccacgt 45177344  T
Q  97 caatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    || |||||||  |||| ||||| | |||| |||||||||||| |||  ||||||||||||||||    
T  45177343 cagtgtagaccgagtcaaaattagccttgagggccaaaactgtcacagatgcaaaacttagggg 45177280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 35213111 - 35213202
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    ||||||||||||||||| |||||||||| |||||||| ||||||||||||||||  ||||||||| |||||||||||||||||||| |||||||    
T  35213111 taagttttgcaactgtaacagttttggccccccaataccaatttttggtaaaaa--aaaataacacgtggcacctcacttaaggtgccacgtca 35213202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 39889850 - 39889946
Alignment:
Q  2 ccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||| |||| || | |||| | ||||||||  |||||||||||    
T  39889850 ccataagttttgcaactgtagcagttttggcctcccaagatcaatttttggtaaaaaaaaaaaaaaaacgtggtatctcacttagagtgtcacgtca 39889946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 236
Target Start/End: Original strand, 41487341 - 41487522
Alignment:
Q  56 aaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaactt 152  Q
    |||| |||||||||| ||||||||||||||  |||||||||||  ||||||  |||| ||||||||||||||||||||||| || |||  ||||||||||    
T  41487341 aaaataaaataacatatggcacctcacttagcgtgtcacgtcagcgtagaccgagtcaaaattggtcttgggggccaaaacagctacagttgcaaaactt 41487440  T
Q  153 agggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||| |||||| |||         |||| || || ||||||||||||| |  ||||||||||||| ||||||||||||||||    
T  41487441 agggggcggttttgtag-ttttttttcttaagg-gctaaaatcgcaactttggaaaagttagagggctaaaactgctattaaac 41487522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 165
Target Start/End: Complemental strand, 21486832 - 21486725
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggg 157  Q
    ||||||| | ||| ||||||||||| ||||||||||||  |||||| ||||| |||||| |||||| |||||||| |||||||  |||||||||||||||    
T  21486832 aaaataatacgtgacacctcacttagggtgtcacgtcagcgtagaccaagtcaaaattgatcttggaggccaaaaatgccacaggtgcaaaacttagggg 21486733  T
Q  158 gtggtttt 165  Q
    | ||||||    
T  21486732 gcggtttt 21486725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 3676201 - 3676371
Alignment:
Q  6 aagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaaga--------aaataacatgtggcacctcacttaaggtgtcacgtc 97  Q
    ||||| ||||||| ||||||||||||| ||| ||   ||||||||||||||||| |        ||||||||  |||||||||||||| |||| ||||||    
T  3676201 aagttatgcaactatagcagttttggccccctaaggccaatttttggtaaaaaatatataaaaaaaataacacatggcacctcacttagggtgccacgtc 3676300  T
Q  98 aatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    |  ||||||  |||| |||||||| |||||| |||||||||||||  ||||||||||||| ||| ||||||    
T  3676301 agcgtagaccgagtcaaaattggttttggggaccaaaactgccacagatgcaaaacttagtgggcggtttt 3676371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 17070964 - 17070910
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||||||||    
T  17070964 ttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaa 17070910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 17577308 - 17577362
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||||||||    
T  17577308 ttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaa 17577362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 154
Target Start/End: Complemental strand, 25144174 - 25144024
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||| ||| ||| ||||||| ||||||   ||||||||||||||||  ||||||||||||||||| ||||||| ||||  ||||||  |||     
T  25144174 taagttttgcaattgttgcaattttggccccccaaggccaatttttggtaaaaa--aaaataacatgtggcacatcacttagggtgcaacgtcagcgtaa 25144077  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttag 154  Q
    ||  |||| |||||||  ||||  ||||||||||||||  |||||||||||||    
T  25144076 accgagtcaaaattggctttggatgccaaaactgccacagatgcaaaacttag 25144024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 29657932 - 29657774
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    ||||||||||||||||||| |||||||| | |||    ||||||||||||||||| ||     || ||||||||||||||| |||||||||||| |||||    
T  29657932 taagttttgcaactgtagccgttttggc-ctccagagccaatttttggtaaaaaaaaa-----cacgtggcacctcacttagggtgtcacgtcagtgtag 29657839  T
Q  105 acaaagtcaaattggtctt--gggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    ||  | ||||| | | |||  ||||||||||||||||||  |||||||| |||||||| ||||||    
T  29657838 accgaatcaaaattgactttggggggccaaaactgccacatatgcaaaatttagggggcggtttt 29657774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 9762432 - 9762298
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||| ||||||| ||||||    ||||||| ||  ||||  |||||||||||||||||||| |||| ||| |||||||  ||||    
T  9762432 taagttttgcaactgtagcaattttggctccccaaggctaattttttgtccaaaa--aaataacatgtggcacctcatttaatgtgccacgtcagcgtag 9762335  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgcca 140  Q
    ||| | || |||||| | |||| ||||||||||||||    
T  9762334 acagaatcaaaattgatattggaggccaaaactgcca 9762298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 22192360 - 22192307
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctatt 232  Q
    ||||||| |||||||||||||||||||||||||||  |||||||||||||||||    
T  22192360 cttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctatt 22192307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 37263416 - 37263359
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||||| ||||||||||||||||| |||||||  |||||||||||||||||||||    
T  37263416 cttagggagtcaaaatcgcaacttcgtaaaagttaaggggcgaaaactgctattaaac 37263359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 165
Target Start/End: Original strand, 16982747 - 16982853
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    ||||||||| ||||||||||||||  |||| |||||||  |||||| ||||| ||||||| |||||||| |||||||| |||  ||||||||||||||||    
T  16982747 aaaataacacgtggcacctcacttggggtgccacgtcagcgtagactaagtcaaaattggccttggggg-caaaactggcacagatgcaaaacttagggg 16982845  T
Q  158 gtggtttt 165  Q
    | ||||||    
T  16982846 gcggtttt 16982853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 33298589 - 33298641
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctat 231  Q
    ||||||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  33298589 cttagggggccaaaatcgcaacttcgtgaaagttaggaggcgaaaactgctat 33298641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 14880566 - 14880414
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggta-aaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgta 103  Q
    |||||||||||||||| ||||||||||   ||||||  |||||||||||| ||||| ||||||||| ||||||  ||||||| | || |||||||   ||    
T  14880566 taagttttgcaactgtcgcagttttgg---cccaatgccaatttttggtataaaaaaaaaataacacgtggca-atcacttaggatgccacgtcagcata 14880471  T
Q  104 gacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    |||  |||| |||| || |||||||||||||||||||||  |||||||| |||||||    
T  14880470 gaccgagtcaaaatcggccttgggggccaaaactgccacagatgcaaaatttagggg 14880414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 236
Target Start/End: Original strand, 27545545 - 27545668
Alignment:
Q  113 aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaag 210  Q
    ||||||| |||||||||||||||||| |||  || |||||||||||| | ||||| |||         ||||||| ||||||||||||||||||||| ||    
T  27545545 aaattggccttgggggccaaaactgctacaattgtaaaacttaggggatagttttgtagttttttt--cttagggggccaaaatcgcaacttcgtgatag 27545642  T
Q  211 ttagagggcgaaaactgctattaaac 236  Q
    |||| |||| ||||| ||||||||||    
T  27545643 ttagggggcaaaaaccgctattaaac 27545668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 41487326 - 41487203
Alignment:
Q  113 aaattggtcttggg-ggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaa 209  Q
    ||||||| |||||| |||||||||||| |||  |||||||||||||||| |||||| |||         ||||||| | |||||||||||||||||||||    
T  41487326 aaattggccttgggcggccaaaactgctacagttgcaaaacttagggggcggttttgtagttttgttt-cttagggggtcaaaatcgcaacttcgtgaaa 41487228  T
Q  210 gttagagggcgaaaactgctattaa 234  Q
     || | |||||||||||||||||||    
T  41487227 attcgggggcgaaaactgctattaa 41487203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 37813247 - 37813334
Alignment:
Q  81 acttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    ||||| |||| |||||||  ||||||  ||||||| |||| |||||||||||||||||||||  ||||||||||||||||| ||||||    
T  37813247 acttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggtttt 37813334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 22846673 - 22846541
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||| |||||||  |||||| |||||||  ||||||||||| ||    |||| |||| ||||||||||||||| |||| || ||||  ||||    
T  22846673 taagttttgcaattgtagcatatttggccccccaatgccaatttttggttaa----aaaaaaacacgtggcacctcacttagggtgccatgtcagcgtag 22846578  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgcca 140  Q
    || || || ||||||  |||| |||||||||||||||    
T  22846577 accaattcaaaattgcccttgagggccaaaactgcca 22846541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 32768505 - 32768560
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||| |||||||||||||||||||||| |||||   |||||||||||||||    
T  32768505 cttagggagtcaaaatcgcaacttcgtgaaagctagagaatgaaaactgctattaa 32768560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 37813220 - 37813165
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| |||||||||| || || ||||||||||| |||||||||||||||||||    
T  37813220 cttagggggccaaaatcgtaaatttgtgaaagttagggggcgaaaactgctattaa 37813165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 755960 - 755906
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| ||||||||||||||||| |||||  |||||||| ||||||||||||||    
T  755960 ttagggggccaaaatcgcaacttcttgaaacatagagggccaaaactgctattaa 755906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 44101372 - 44101463
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    |||||||||||||| |||||||||||||  ||||| | ||||||||||| ||||  |||| |||| ||||||| ||| ||| | ||||||||||    
T  44101372 taagttttgcaactttagcagttttggcctcccaagaccaatttttggtcaaaa--aaaaaaacacgtggcacttcatttaggatgtcacgtca 44101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 25897047 - 25896990
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaact 237  Q
    |||||| |||||||||||||||| |  |||||||| |||| |||||||||||||||||    
T  25897047 ttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaaact 25896990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 521709 - 521753
Alignment:
Q  190 aaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||||||||||| |||| ||| |||||||||||||||    
T  521709 aaaatcgcaacttcgtgaaaattagggggtgaaaactgctattaa 521753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 14880590 - 14880638
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactg 227  Q
    ||||||| |||||||| ||||||||||||||||||| ||||||| ||||    
T  14880590 cttagggggccaaaattgcaacttcgtgaaagttagggggcgaacactg 14880638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 16982684 - 16982632
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctat 231  Q
    |||||||  ||||||| ||||||||||||||||||| ||| ||||||||||||    
T  16982684 cttaggggaccaaaattgcaacttcgtgaaagttagggggtgaaaactgctat 16982632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 26824098 - 26824141
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctatta 233  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||    
T  26824098 caaaatcgcaacttcgtgaaagttag-gggtgaaaactgctatta 26824141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 29044683 - 29044778
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaactta 153  Q
    ||||||||  ||||||||||| ||| |||  |||||||  ||||||  ||||||| |||| |||||||||||||||||||||  ||||||||||||    
T  29044683 aaaataacgcgtggcacctcatttagggtaccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaactta 29044778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 6807231 - 6807176
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| |||||||||||||||||| ||||||||  |||| |||||| |||||||    
T  6807231 cttagggggccaaaatcgcaacttcgagaaagttatggggcaaaaactactattaa 6807176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 9762463 - 9762510
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||||||| ||||||||  |||||||| |||||||||    
T  9762463 gccaaaatcgcaacttcgtaaaagttaggtggcgaaaattgctattaa 9762510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 23702181 - 23702126
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||  ||||||||| ||||| ||||||||||  |||||||||||||||||||    
T  23702181 cttaggggaccaaaatcgtaactttgtgaaagttaaggggcgaaaactgctattaa 23702126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 25144143 - 25144253
Alignment:
Q  124 gggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagagggcga 221  Q
    ||||||||||| ||| |||  ||||||||||||||||||||||| |||         ||||||| || ||||||||||||||||||| |||||  |||||    
T  25144143 gggggccaaaattgcaacaattgcaaaacttagggggtggttttgtagtttttt---cttaggg-gctaaaatcgcaacttcgtgaatgttaggaggcga 25144238  T
Q  222 aaactgctattaaac 236  Q
    ||| |||||||||||    
T  25144239 aaattgctattaaac 25144253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 28349563 - 28349618
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| |||||||||||||||| | ||||||||| |||| |||||| |||||||    
T  28349563 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactactattaa 28349618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 29657964 - 29658011
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||||||||||  |||||||||| | |||||||||||||||||||    
T  29657964 caaaatcgcaacttgatgaaagttagggagcgaaaactgctattaaac 29658011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 37940035 - 37939982
Alignment:
Q  113 aaattggtcttgggggccaaaactgccacat--gcaaaacttagggggtggtttt 165  Q
    ||||||||||||| | |||||||||||||||  ||||||||||||||||||||||    
T  37940035 aaattggtcttggtg-ccaaaactgccacatatgcaaaacttagggggtggtttt 37939982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 39889822 - 39889775
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||| ||||||||||||||||||   ||||||||||||||||||    
T  39889822 gccaaaattgcaacttcgtgaaagttaagaggcgaaaactgctattaa 39889775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 45457014 - 45456967
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||| ||||||||| |||||||| |||||||||||| ||||||||    
T  45457014 caaaatcacaacttcgtaaaagttagggggcgaaaactgttattaaac 45456967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 17070989 - 17071023
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaa 39  Q
    |||||||||||||||||||||||||||| ||||||    
T  17070989 taagttttgcaactgtagcagttttggccccccaa 17071023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 17577283 - 17577249
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaa 39  Q
    |||||||||||||||||||||||||||| ||||||    
T  17577283 taagttttgcaactgtagcagttttggccccccaa 17577249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 35213088 - 35213034
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| | |||||||||||||| || |||||||| |||||||||| ||||||||    
T  35213088 ttagggggtcaaaatcgcaactttgtcaaagttagtgggcgaaaaccgctattaa 35213034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 37940166 - 37940215
Alignment:
Q  186 agccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||||||| ||||||||||||||||| ||||  ||||||||||||||||    
T  37940166 agccaaaatcacaacttcgtgaaagtta-aggggaaaaactgctattaaac 37940215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 7010981 - 7010924
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||| | || |||||||||||| ||||| ||||||||  ||||||||||||||||    
T  7010981 cttagggggtcagaatcgcaacttcttgaaacttagagggttaaaactgctattaaac 7010924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 156
Target Start/End: Complemental strand, 27545524 - 27545420
Alignment:
Q  54 aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaattggtcttgggggccaaaactgcc--acatgcaaaact 151  Q
    |||||| |||| |||| ||||||||||||||| |||| |||||||  |||||   ||| ||| | | ||| |||||||||||||||  | ||||||||||    
T  27545524 aaaaaaaaaaacaacacgtggcacctcacttagggtgccacgtcagcgtagatcgagttaaaattggctttggggccaaaactgccatagatgcaaaact 27545425  T
Q  152 taggg 156  Q
    |||||    
T  27545424 taggg 27545420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 29790935 - 29790839
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttag 154  Q
    ||||||||||||| ||| |||| || |||| |||||||  |||||| ||||| ||||||  || |||| ||||||||||||||  ||||||||||||    
T  29790935 aaaataacatgtgacacttcacatagggtgccacgtcagcgtagaccaagtcaaaattgacctcggggaccaaaactgccacatgtgcaaaacttag 29790839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 41602596 - 41602553
Alignment:
Q  124 gggggccaaaactgccacat--gcaaaacttagggggtggtttt 165  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||    
T  41602596 gggggccaaaactgccacatgggcaaaacttagcgggtggtttt 41602553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 234
Target Start/End: Original strand, 44617814 - 44618048
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaag------aaaataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    ||||||||||||||||||||||||| |  ||||||  ||||||||||||||||||       ||||||||| ||| ||||||| ||| |||| |||||||    
T  44617814 taagttttgcaactgtagcagttttagt-ccccaaggtcaatttttggtaaaaaaataaaataaaataacaggtgacacctcatttagggtgccacgtca 44617912  T
Q  99 atgtagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatc 195  Q
      ||||||  ||||||| ||||||||||||||||||||||||||  ||||||||||||||||| |||||| ||          |||| ||  ||||||||    
T  44617913 gcgtagaccgagtcaaaattggtcttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgta---attttttcttaagggaccaaaatc 44618009  T
Q  196 gcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||| ||||||||||||||  ||||||||||||||    
T  44618010 gcaacttcttgaaagttagagggttaaaactgctattaa 44618048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 8857282 - 8857117
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaat 100  Q
    |||||||||||||||||| ||||||||||||| | ||||  ||||||||||||| |||| ||||||||| ||||||||||| |||||||| ||| |||      
T  8857282 cccataagttttgcaactatagcagttttggc-ctccaaggtcaatttttggtagaaaa-aaaataacacgtggcacctcatttaaggtgccacatcagc 8857185  T
Q  101 gtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    || ||| ||||| |||||||  ||||||||||||||||||||  |||||||||||||| || ||||||    
T  8857184 gttgaccaagtcaaaattggcattgggggccaaaactgccacaaatgcaaaacttaggaggcggtttt 8857117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 24472529 - 24472683
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    ||||||||| |||||||||||||||||| || |||   ||||||||||||||||  ||||||||| ||||||||||||||| |||| ||||| | |||||    
T  24472529 taagttttgtaactgtagcagttttggctcctcaaggccaatttttggtaaaaa--aaaataacacgtggcacctcacttagggtgccacgttagtgtag 24472626  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttaggggg 158  Q
    ||  |||| |||||||  |||| |||||||||||||||  |||||||||||||||||    
T  24472627 acggagtcaaaattggcattggcggccaaaactgccacagatgcaaaacttaggggg 24472683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 4576622 - 4576756
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaat 100  Q
    |||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||  ||||||| ||||||||||||||| |||| |||| ||      
T  4576622 cccataagttttgcaactgtagcagttttggc-ccccaagaccaatttttggtaaaaaag--aataacacgtggcacctcacttagggtgccacgccagc 4576718  T
Q  101 gtagacaaagtc-aaattggtcttgggggccaaaactg 137  Q
    ||||||  |||| |||||||   |||||||||||||||    
T  4576719 gtagaccgagtcaaaattggcagtgggggccaaaactg 4576756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 39918673 - 39918437
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaa-----aataacatgtggcacctcacttaaggtgtcacgtcaa 99  Q
    |||||||||||||||||||| ||||||| ||||||   ||||||||||||||||| ||     ||||||| ||||||||||||||| |||| |||||||     
T  39918673 taagttttgcaactgtagcaattttggccccccaaggccaatttttggtaaaaaaaaataaaaaataacacgtggcacctcacttagggtgccacgtcag 39918574  T
Q  100 tgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcg 196  Q
     | ||||  |||| ||||||| ||||||||||||||| |||||  ||||||||||||| ||| | ||||  ||         ||||||| ||||||||||    
T  39918573 cgaagaccgagtcaaaattggccttgggggccaaaacagccacatatgcaaaacttagcgggcgattttgcag-ttttttttcttagggggccaaaatcg 39918475  T
Q  197 caacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| | ||||||||| |||| |||||| |||||||    
T  39918474 caactttgagaaagttagggggctaaaactactattaa 39918437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 6510231 - 6510139
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaa 99  Q
    |||||||||||||||||||||||||||| |||||| |  |||||| ||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  6510231 taagttttgcaactgtagcagttttggccccccaagactaatttt-ggtaaaaaa-aaaataacatgtggcacctcacttagggtgccacgtcaa 6510139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 124 - 238
Target Start/End: Original strand, 6510200 - 6510314
Alignment:
Q  124 gggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagagggcga 221  Q
    ||||||||||||||| |||  |||||||||||||||| |||||| |||         ||||||| ||||||||||||||||| |||||||||||||||||    
T  6510200 gggggccaaaactgctacagttgcaaaacttagggggcggttttgtagctttttt--cttagggtgccaaaatcgcaacttcatgaaagttagagggcga 6510297  T
Q  222 aaactgctattaaactt 238  Q
    |||||||||||||||||    
T  6510298 aaactgctattaaactt 6510314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 14489404 - 14489521
Alignment:
Q  116 ttggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagtta 213  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||| |||| |||         ||||||| |||||||||||||||||||||||||||    
T  14489404 ttggccttgggggccaaaactgccacagttgcaaaacttagggggtgattttgtagttttttt--cttaggg-gccaaaatcgcaacttcgtgaaagtta 14489500  T
Q  214 gagggcgaaaactgctattaa 234  Q
    | |||||||||||||||||||    
T  14489501 gggggcgaaaactgctattaa 14489521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 37431728 - 37431625
Alignment:
Q  54 aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaac 150  Q
    |||||| ||||||||||||||||||||||||| |||| |||||||  ||||||  |||| ||||||| |||||||||||||||||||||  |||||||||    
T  37431728 aaaaaataaaataacatgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaac 37431629  T
Q  151 ttag 154  Q
    ||||    
T  37431628 ttag 37431625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 54 - 165
Target Start/End: Complemental strand, 34761032 - 34760918
Alignment:
Q  54 aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaac 150  Q
    |||||| |||| |||||||| ||||||||||| |||| |||||||   ||||| | |||||| ||||||||||||||||||||||||||  |||||||||    
T  34761032 aaaaaaaaaaaaaacatgtgacacctcacttagggtgccacgtcagcatagaccacgtcaaaattggtcttgggggccaaaactgccacatatgcaaaac 34760933  T
Q  151 ttagggggtggtttt 165  Q
    |||||||| ||||||    
T  34760932 ttagggggcggtttt 34760918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 15023070 - 15022916
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    ||||||||| |||||||||| ||||||| |||||| | ||||||||||||||||  |||| |||| ||||||||||| ||| |||| || ||||  ||||    
T  15023070 taagttttgtaactgtagcaattttggccccccaagaccaatttttggtaaaaa--aaaaaaacacgtggcacctcaattagggtgccatgtcagcgtag 15022973  T
Q  105 acaaagtcaaa-ttggtctt-gggggccaaaactgccac--atgcaaaacttagggg 157  Q
    ||  ||||||| |||| ||| ||||||||||||||||||  |||||||| |||||||    
T  15022972 actgagtcaaatttggccttggggggccaaaactgccacaaatgcaaaatttagggg 15022916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 43029025 - 43028797
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||| ||| ||||||||||||||| || |||   ||||||||||| |||||  ||||||||  |||||||||||||| |||| |||||||  ||||    
T  43029025 taagttttacaattgtagcagttttggccccacaaggccaatttttggttaaaaa--aaataacacttggcacctcacttagggtgccacgtcagcgtag 43028928  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaact 201  Q
    ||  |||| ||||||| | | | |||||||||||||||  ||||||||||||||||| |||||| |||         ||||||| |||||||||||||||    
T  43028927 accgagtcaaaattggccctagaggccaaaactgccacagatgcaaaacttaggggg-ggttttgtag-ttttttttcttagggggccaaaatcgcaact 43028830  T
Q  202 tcgtgaaagttagagggcgaaaactgctattaa 234  Q
    | |   ||||||| |||| ||||||||||||||    
T  43028829 ttggagaagttagggggctaaaactgctattaa 43028797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 27489667 - 27489509
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaa-aaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgta 103  Q
    |||||||||||||||||||||||||| | ||||||   ||||| ||||||| |||| ||||||||| ||| ||||||||||| | || |||||||  |||    
T  27489667 taagttttgcaactgtagcagttttgaccccccaaggccaattcttggtaaaaaaaaaaaataacacgtgtcacctcacttaggatgccacgtcagcgta 27489568  T
Q  104 gacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggt 159  Q
     ||  |||| ||||||  ||||| |||||||||||||||  |||||||| |||||||||    
T  27489567 aaccgagtcaaaattgcccttggaggccaaaactgccacagatgcaaaagttagggggt 27489509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 25333666 - 25333565
Alignment:
Q  71 gtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggttttat 167  Q
    ||||||||| ||||| |||| |||||||  |||||| |||||||| |||| ||||| | ||||||||||||||  |||||||||||||||||||||||||    
T  25333666 gtggcaccttacttagggtgccacgtcagcgtagaccaagtcaaaattggccttggagaccaaaactgccacaggtgcaaaacttagggggtggttttat 25333567  T
Q  168 ag 169  Q
    ||    
T  25333566 ag 25333565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 31827764 - 31827596
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataa-----catgtggcacctcacttaaggtgtcacgtcaa 99  Q
    |||||||||||||||||||||||||||| ||||||   ||||||||||||||||| |||| ||     |||||||||||||||||| |||| |||||||     
T  31827764 taagttttgcaactgtagcagttttggc-ccccaaggccaatttttggtaaaaaaaaaaaaaaaaaaacatgtggcacctcacttagggtgccacgtcag 31827666  T
Q  100 tgtagacaaagtc-aaattggtctt-gggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
     ||||||  | || |||||| | || |||||||||||||| |||  ||||||| ||||||||||| ||||    
T  31827665 cgtagaccgaatcaaaattgattttggggggccaaaactggcacagatgcaaagcttagggggtgatttt 31827596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 36715383 - 36715460
Alignment:
Q  4 ataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcactta 85  Q
    ||||||||||||| ||||||||||||| | || ||| ||||||||||||||||    |||||||||||||||||||||||||    
T  36715383 ataagttttgcaattgtagcagttttgacccctcaaaatcaatttttggtaaa----aaaataacatgtggcacctcactta 36715460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 6592965 - 6592805
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaag------aaaataacatgtggcacctcacttaaggtgtcacgtca 98  Q
    |||||||||||||||||||||||||||| ||||||   ||||||||||||||||||      |||| |||| ||||||||||||||| ||||  | ||||    
T  6592965 taagttttgcaactgtagcagttttggc-ccccaaagccaatttttggtaaaaaagaatataaaaaaaacacgtggcacctcacttagggtgcaatgtca 6592867  T
Q  99 atgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
      ||||||  |||| ||||| |  ||| ||||||||||||||||  ||||||||||||||||    
T  6592866 gcgtagactgagtcaaaattagcattgagggccaaaactgccacatatgcaaaacttagggg 6592805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 34679324 - 34679175
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||||||||||||||||||| ||||||   |||        |||||| | ||||||| ||||||||||||||| |||| |||||||  ||||    
T  34679324 taagttttgcaactgtagcagttttggccccccaaagccaaa-------aaaaaaaataataacacgtggcacctcacttagggtgccacgtcagcgtag 34679232  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttaggggg 158  Q
    ||   ||| ||||| ||||||| ||||||||||||||||  ||||||||||||||||    
T  34679231 accgggtcaaaatttgtcttggaggccaaaactgccacatgtgcaaaacttaggggg 34679175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 231
Target Start/End: Original strand, 5470410 - 5470643
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaa--------ataacatgtggcacctcacttaaggtgtcacgt 96  Q
    |||||||||||| ||||||||||||||| ||||||   |||||||||||||||||  ||        | |||| ||||||||||||||| |||| |||||    
T  5470410 taagttttgcaattgtagcagttttggc-ccccaaggccaatttttggtaaaaaaataataataaataaaacacgtggcacctcacttagggtgccacgt 5470508  T
Q  97 caatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaa 193  Q
    ||   |||||  ||||||| |||| |||||||||||||||||||||  ||| |||||||| |||| |||||| |||          |||||| |||||||    
T  5470509 cagcatagaccgagtcaaaattggccttgggggccaaaactgccacagatgtaaaacttaaggggcggttttgtagttttttt---ttagggggccaaaa 5470605  T
Q  194 tcgcaacttcgtgaaagttagagggcgaaaactgctat 231  Q
    |||||||||   ||||||||| |||| |||||||||||    
T  5470606 tcgcaactttaggaaagttagggggctaaaactgctat 5470643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 14489391 - 14489217
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccaca--tgcaaaacttagggg 157  Q
    ||||||||| |||||||||||| || |||| ||| |||  ||||||  ||||||| |||||||||| || |||||||||||||  |||||||||||||||    
T  14489391 aaaataacacgtggcacctcacgtagggtgccacatcagcgtagaccgagtcaaaattggtcttggaggtcaaaactgccacaggtgcaaaacttagggg 14489292  T
Q  158 gtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    | |||||| ||          |||| || ||||||||| ||||||   |||||||||||||| ||||||||||||||    
T  14489291 gcggttttgta--atttttttcttaaggggccaaaatcacaacttttggaaagttagagggctaaaactgctattaa 14489217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 4925678 - 4925518
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaaga-----aaataacatgtggcacctcacttaaggtgtcacgtcaa 99  Q
    |||||||||||||||||||||||||||| ||  ||   |||| ||||||| |||| |     |||||||| ||||||||| ||||| |||| |||||||     
T  4925678 taagttttgcaactgtagcagttttggccccttaaggccaatatttggtataaaaaattaaaaaataacacgtggcaccttacttagggtgccacgtcag 4925579  T
Q  100 tgtagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
     ||||||| |  |||| |||||||| |||| ||||||||||||  ||||||||||||||||    
T  4925578 cgtagacagaaccaaaattggtcttaggggtcaaaactgccacatatgcaaaacttagggg 4925518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 37431801 - 37431850
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  37431801 gccaaaatcgcaacttcgtggaagttagggggcgaaaactgctattaaac 37431850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 16043211 - 16043336
Alignment:
Q  113 aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnn--cttagggagccaaaatcgcaacttcgtgaa 208  Q
    ||||||| ||||||||||||||||||||||  |||||||| ||||||| |||| | |||           ||||||| |||||||||| |||||||||||    
T  16043211 aaattggccttgggggccaaaactgccacagatgcaaaacatagggggcggttctgtagtttttcttcttcttagggggccaaaatcgtaacttcgtgaa 16043310  T
Q  209 agttagagggcgaaaactgctattaa 234  Q
    |||||| |||||||||||||| ||||    
T  16043311 agttagggggcgaaaactgctgttaa 16043336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 41196359 - 41196461
Alignment:
Q  54 aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaac 150  Q
    |||||| ||||||||||||||||||||||||| |||| |||||||  |||||| ||||| ||||||   |||||||| |||||| ||||  |||||||||    
T  41196359 aaaaaaaaaaataacatgtggcacctcacttagggtgccacgtcagcgtagaccaagtctaaattgacattgggggcaaaaacttccacatatgcaaaac 41196458  T
Q  151 tta 153  Q
    |||    
T  41196459 tta 41196461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 34679347 - 34679401
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  34679347 ttagggggccaaaatcacaacttcgtgaaagttagggggcaaaaactgctattaa 34679401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 34761127 - 34761173
Alignment:
Q  190 aaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||    
T  34761127 aaaatcgcaacttcgtgaaagttaggggacgaaaactgctattaaac 34761173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 36177038 - 36176984
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| || |||||||||||||||||||| ||||||||| ||||||||||||||    
T  36177038 ttagggggctaaaatcgcaacttcgtgaaacttagagggctaaaactgctattaa 36176984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 14943618 - 14943788
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaa-------ataacatgtggcacctcacttaaggtgtcacgtc 97  Q
    |||||||||||||||||||| ||||| | | |||| | ||| ||||||||||||| |||       | |||| ||||||||||||||| |||| ||| ||    
T  14943618 taagttttgcaactgtagcaattttgacccaccaagaccaaattttggtaaaaaaaaaacaatagaaaaacacgtggcacctcacttagggtgccacatc 14943717  T
Q  98 aatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggtttt 165  Q
    |  ||||||  |||| ||||| | |||||||||||||| |||||||  |||||||||||| ||| ||||||    
T  14943718 agcgtagaccgagtcaaaattagccttgggggccaaaaatgccacaggtgcaaaacttagagggcggtttt 14943788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 43029050 - 43029106
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||| |||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  43029050 cttagggggccaaaatcgcaactttgtgaaagtta-agggcaaaaactgctattaaac 43029106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 5362275 - 5362394
Alignment:
Q  22 gcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattgg- 119  Q
    ||||||||||  ||||||   ||||||||||||||||    ||||||||||||||||||||||| | ||||||||||  ||||||  |||| |||||||     
T  5362275 gcagttttggtcccccaaagccaatttttggtaaaaag---aataacatgtggcacctcacttaggatgtcacgtcagcgtagactgagtcaaaattggc 5362371  T
Q  120 tcttgggggccaaaactgccaca 142  Q
    | |||| ||||||||||||||||    
T  5362372 ttttggaggccaaaactgccaca 5362394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 5470377 - 5470325
Alignment:
Q  190 aaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaacttattt 242  Q
    |||||||||||||||||||| | || || ||||||||||||||||||||||||    
T  5470377 aaaatcgcaacttcgtgaaaataaggggacgaaaactgctattaaacttattt 5470325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 18969178 - 18969312
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||| ||||||||||||| | ||||||   |||||||||||||||   ||||||||| ||| ||||||| |||  |||||||||||  ||||    
T  18969178 taagttttgcaattgtagcagttttgac-ccccaaagccaatttttggtaaaa---aaaataacacgtgacacctcatttagagtgtcacgtcagcgtag 18969273  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccaca 142  Q
     |  |||| ||||||| |||||||| |||||| ||||||    
T  18969274 gcctagtcaaaattggccttgggggtcaaaacagccaca 18969312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 37803366 - 37803194
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaa-------agaaaataacatgtggcacctcacttaaggtgtca 93  Q
    ||||||||||||||||||||||||||||||   ||||||   ||||||||||||||||       | ||||||||| ||| ||||| ||||| |||| ||    
T  37803366 cccataagttttgcaactgtagcagttttgat-ccccaaggccaatttttggtaaaaaaaaacataaaaaataacacgtgacaccttacttagggtgcca 37803268  T
Q  94 cgtcaatgtagacaaagtcaaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtggtttt 165  Q
    |||||  ||||||  ||||||| | | | | |||| ||||||||||||  |||||||||||||| || ||||||    
T  37803267 cgtcagcgtagaccgagtcaaaattgacattggggtcaaaactgccacaaatgcaaaacttaggaggcggtttt 37803194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 8553680 - 8553774
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaattggtcttgggggccaaaactgccac--atgcaaaactta 153  Q
    ||||||||| ||||||||||||||| ||||||||||||   |||||  ||||||||||   ||||| | ||||||||||||  ||||||||||||    
T  8553680 aaaataacacgtggcacctcacttagggtgtcacgtcagcatagaccgagtcaaattgactttgggagacaaaactgccacaaatgcaaaactta 8553774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 18709297 - 18709250
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||| ||||||||||||||||| || ||||||||||||||||    
T  18709297 gccaaaatcgaaacttcgtgaaagttaggggacgaaaactgctattaa 18709250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 35718887 - 35718741
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaa---------aagaaaataacatgtggcacctcacttaaggtgtcacg 95  Q
    |||||||||||||||||||||||||||| ||| ||  ||||||||||||||||         || ||||| ||||||||||  ||||||| |||| |||     
T  35718887 taagttttgcaactgtagcagttttggc-ccctaaggtcaatttttggtaaaaaaaataaataaaaaaattacatgtggcaaatcacttagggtgccaca 35718789  T
Q  96 tcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca 142  Q
    |||  ||||||  |||| ||||||| ||||| ||||||||||||||||    
T  35718788 tcaccgtagactgagtcaaaattggccttggaggccaaaactgccaca 35718741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 5008417 - 5008534
Alignment:
Q  54 aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaac 150  Q
    |||||| |||| ||||||||||| |||||||| |||| |||||||  ||||||  |||| ||||||  |||| ||||||||| ||||||  |||||||||    
T  5008417 aaaaaaaaaaaaaacatgtggcatctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgagggccaaaattgccacaaatgcaaaac 5008516  T
Q  151 ttagggggtggttttata 168  Q
    |||| ||  |||||||||    
T  5008517 ttagaggacggttttata 5008534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 19206199 - 19206145
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| |||||||||||||||| |||||| |||| ||||||||| |||||||||    
T  19206199 ttagggggccaaaatcgcaactttgtgaaaattagggggcgaaaattgctattaa 19206145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 169
Target Start/End: Original strand, 24306157 - 24306266
Alignment:
Q  63 aataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggt 159  Q
    ||||||||||| ||||||||||| |||||||| |||  |||||  ||||| ||||||  ||||||||||| ||||| ||||  ||||||||||| |||      
T  24306157 aataacatgtgacacctcacttagggtgtcacatcagcgtagatcaagtcaaaattgaccttgggggccagaactgtcacatgtgcaaaacttaagggac 24306256  T
Q  160 ggttttatag 169  Q
    ||||||||||    
T  24306257 ggttttatag 24306266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 19206223 - 19206308
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggt-----aaaaaagaaaataacatgtggcacctcactta 85  Q
    |||||||| ||||||||||||||||||| ||||||   |||||||||||     ||| || ||||||||| |||||||||||||||    
T  19206223 taagttttacaactgtagcagttttggccccccaaggccaatttttggtaaagaaaataataaaataacacgtggcacctcactta 19206308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 31827722 - 31827842
Alignment:
Q  113 aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaag 210  Q
    ||||||| |||||||||||||||||| |||  |||||||||||||||||| |||| ||          ||||||  | || |||||||||||||| ||||    
T  31827722 aaattggccttgggggccaaaactgctacagttgcaaaacttagggggtgattttgta---tttttttcttaggaggtcataatcgcaacttcgtaaaag 31827818  T
Q  211 ttagagggcgaaaactgctattaa 234  Q
    |||| ||||||||| |||||||||    
T  31827819 ttagggggcgaaaattgctattaa 31827842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 32969794 - 32969838
Alignment:
Q  190 aaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| |||| |||||||||||| |||||||||||||||||||    
T  32969794 aaaatcgaaactccgtgaaagttagggggcgaaaactgctattaa 32969838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 5362225 - 5362178
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||||||||||||| ||||||||||| ||||||||| | |||||||    
T  5362225 gccaaaatcgcaactttgtgaaagttagggggcgaaaattactattaa 5362178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 15023094 - 15023149
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| | ||||||| ||||||| |||||||||| |||| ||||||||||||||    
T  15023094 cttagggggtcaaaatcacaacttcttgaaagttagggggccaaaactgctattaa 15023149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 21358361 - 21358416
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| ||||||||| |||||| | ||||||||| |||| ||||||||||||||    
T  21358361 cttagggggccaaaatcacaactttgagaaagttagggggcaaaaactgctattaa 21358416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 35718925 - 35718968
Alignment:
Q  193 atcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||||||||||||||||||  |||| |||||||||||||||    
T  35718925 atcgcaacttcgtgaaagttaggaggcggaaactgctattaaac 35718968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 14816054 - 14816108
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| ||||||||||||||||| |||||  ||| |||| ||||||||||||||    
T  14816054 ttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaa 14816108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 25333749 - 25333795
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaact 226  Q
    |||||| | ||||||||||| ||||| ||||||||||||||||||||    
T  25333749 ttagggggtcaaaatcgcaatttcgttaaagttagagggcgaaaact 25333795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 34100862 - 34100916
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa 115  Q
    |||| |||| ||||||||||||||||||||||| ||||  |||||| ||||||||    
T  34100862 aaaaaaacacgtggcacctcacttaaggtgtcatgtcagcgtagaccaagtcaaa 34100916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 25508 - 25456
Alignment:
Q  115 attggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggtttt 165  Q
    ||||| |||||||| |||||||||||||  |||||||||||||||| ||||||    
T  25508 attggccttgggggtcaaaactgccacaggtgcaaaacttagggggcggtttt 25456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 21362003 - 21361951
Alignment:
Q  115 attggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggtttt 165  Q
    ||||| |||||| |||||||||||||||  |||||||||||||||||| ||||    
T  21362003 attggccttgggagccaaaactgccacatgtgcaaaacttagggggtgttttt 21361951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 165
Target Start/End: Complemental strand, 25411708 - 25411612
Alignment:
Q  72 tggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggtttt 165  Q
    |||||| ||||||| |||| |||||||   |||||  ||||||| ||||| |||||||  ||||||||||||  |||||||||||||||| ||||||    
T  25411708 tggcacatcacttatggtgccacgtcagcatagaccgagtcaaaattggtattgggggtgaaaactgccacagatgcaaaacttagggggcggtttt 25411612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 37803398 - 37803443
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||||||||| |||||||| ||||||||| || ||||||    
T  37803398 caaaatcgcaacttcgtaaaagttagggggcgaaaattgttattaa 37803443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 2609128 - 2609080
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaa 235  Q
    |||||||||  |||||||| |||||||| ||||||||||| ||||||||    
T  2609128 gccaaaatcaaaacttcgtaaaagttagggggcgaaaactactattaaa 2609080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 5470452 - 5470405
Alignment:
Q  113 aaattggtcttgggggccaaaactgccaca--tgcaaaacttaggggg 158  Q
    ||||||| |||||||||||||||||| |||  ||||||||||||||||    
T  5470452 aaattggccttgggggccaaaactgctacaattgcaaaacttaggggg 5470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 6592999 - 6593035
Alignment:
Q  190 aaaatcgcaacttcgtgaaagttagagggcgaaaact 226  Q
    |||||||||||||||||||||||||  ||||||||||    
T  6592999 aaaatcgcaacttcgtgaaagttaggtggcgaaaact 6593035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 12948946 - 12948890
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    |||||| | ||||||||||||||| | ||| |||| |||| ||||||||||||||||    
T  12948946 ttagggtgtcaaaatcgcaacttcttaaaatttagggggctaaaactgctattaaac 12948890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 18224965 - 18224905
Alignment:
Q  5 taagttttgcaactgtagcag-ttttggcaccccaatatcaatttttggtaaaaaagaaaa 64  Q
    |||||||||||| |||||||| ||||||| |||||| | |||| |||||||||||| ||||    
T  18224965 taagttttgcaattgtagcaggttttggccccccaagaccaatatttggtaaaaaaaaaaa 18224905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 20650428 - 20650376
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctat 231  Q
    ||||||| ||||||||| ||||||| ||||| |||| |||| |||||||||||    
T  20650428 cttagggggccaaaatctcaacttcttgaaacttagggggctaaaactgctat 20650376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 640 - 405
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaa---aagaaaataacatgtggcacctcacttaaggtgtcacgtcaatg 101  Q
    |||||||||||| | |||||||||  || |||||| | ||| |||||||||||   || |||||||||  || ||||||| ||| |||| ||||||| |     
T  640 taagttttgcaattctagcagtttatgccccccaagaccaagttttggtaaaataaaataaaataacacatgacacctcatttagggtgccacgtcagta 541  T
Q  102 tagacaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgca 198  Q
    |||||  ||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||||||| |||         ||||||| ||||||||||||    
T  540 tagaccgagtcaaaattggtcttgggggccaaaactgccacatatgtaaaacttagggggtggttttgtagtttttttttcttagggggccaaaatcgca 441  T
Q  199 acttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||| | | ||||||| |||| ||| ||||||||||    
T  440 actttgaggaagttagggggctaaagctgctattaa 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 666 - 718
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctat 231  Q
    ||||||| ||||||||||||||||||| ||||||||  | |||||||||||||    
T  666 cttagggggccaaaatcgcaacttcgtaaaagttaggagacgaaaactgctat 718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 77092 - 76940
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||| ||||||||||||||||||| | |||    |||||||||||||||||   ||||||| ||| ||||||||||| |||| |||||||  ||||    
T  77092 taagttttacaactgtagcagttttggccctccacggccaatttttggtaaaaaa---aataacacgtgacacctcacttagggtgccacgtcagcgtag 76996  T
Q  105 acaaagtcaaa-ttggtcttgggggccaaaactgccac--atgcaaaacttaggggg 158  Q
    ||  ||||||| |||| ||||||||| |||||||||||  |||||||||||||||||    
T  76995 accgagtcaaaattggccttgggggc-aaaactgccacaaatgcaaaacttaggggg 76940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 2839 - 2991
Alignment:
Q  9 ttttgcaactgtagcagttttggcaccccaatatcaatttttggt------aaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgt 102  Q
    |||| ||||||||||||||||||| |||||| | |||||||||||      |||||| |||| || | |||||| |||| ||| ||||||||||||| ||    
T  2839 ttttacaactgtagcagttttggctccccaagaccaatttttggtaaaaacaaaaaaaaaaaaaaaacgtggcatctcatttagggtgtcacgtcaaagt 2938  T
Q  103 agacaaagtcaaattggtcttgggggccaaaactgccac--atgcaaaactta 153  Q
    ||||  ||||||| | | ||| ||||||||||||| |||  ||||||||||||    
T  2939 agactgagtcaaaattggctttggggccaaaactgtcacatatgcaaaactta 2991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 9652 - 9490
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaa-------agaaaataacatgtggcacctcacttaaggtgtcacgtc 97  Q
    ||||||||||||||||||| ||| |||  ||| ||   ||||||||||||||||       | ||||||||| ||||||||||| ||||| |||||||||    
T  9652 taagttttgcaactgtagcggttctggtccccgaaggccaatttttggtaaaaataaaaataaaaaataacacgtggcacctcatttaagatgtcacgtc 9553  T
Q  98 aatgtagacaaagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggg 157  Q
    |   |||||  |||| ||||||| ||||||||| |||||||||||  ||||||||||||||||    
T  9552 agcctagaccgagtcaaaattggccttgggggctaaaactgccacatatgcaaaacttagggg 9490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 3622 - 3567
Alignment:
Q  187 gccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaacttattt 242  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||||| |||||||    
T  3622 gccaaaatcgtaactttgtgaaagttagaaggcgaaaactgctattaagcttattt 3567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 9633 - 9706
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcac 82  Q
    |||||||||||||||||| ||||||||| |||||| |||||||||||||||||   |||||||||  |||||||||||    
T  9633 taagttttgcaactgtagtagttttggc-ccccaagatcaatttttggtaaaa---aaaataacacatggcacctcac 9706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 46190 - 46082
Alignment:
Q  124 gggggccaaaactgccaca--tgcaaaacttagggggtggttttatagnnnnnnnnncttagggagccaaaatcgcaacttcgtgaaagttagagggcga 221  Q
    ||||||||||||||| |||  |||||||||||||||| |||||| |||         ||||||| |  ||||||||||||||||||||||||| ||||||    
T  46190 gggggccaaaactgctacagttgcaaaacttagggggcggttttgtagtttctttt-cttagggggttaaaatcgcaacttcgtgaaagttagggggcga 46092  T
Q  222 aaactgctat 231  Q
    ||||||||||    
T  46091 aaactgctat 46082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 145586 - 145449
Alignment:
Q  5 taagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatgtag 104  Q
    |||||||||||| ||||||||||||| | ||| ||   |  ||||||||| |||| ||||||||| ||||||||||||||| |||  || ||||   |||    
T  145586 taagttttgcaattgtagcagttttgtccccctaaggccgttttttggtataaaa-aaaataacacgtggcacctcacttagggttccatgtcagcctag 145488  T
Q  105 acaaagtc-aaattggtcttgggggccaaaactgccaca 142  Q
    ||  |||| ||||||| ||||||||||||||||||||||    
T  145487 accgagtcaaaattggccttgggggccaaaactgccaca 145449  T

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Target: scaffold0041 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 94037 - 93926
Alignment:
Q  1 cccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaat 100  Q
    ||||||||||||| |||||||||||||| ||| | |||||  |||||||||||| ||   ||||||||| || | |||||||||| |||| |||||||      
T  94037 cccataagttttgtaactgtagcagtttaggccctccaatgccaatttttggtataa---aaaataacacgtagtacctcacttagggtgccacgtcagc 93941  T
Q  101 gtagacaaagtcaaa 115  Q
    ||||||  |||||||    
T  93940 gtagaccgagtcaaa 93926  T

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Target: scaffold1458 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 1529 - 1474
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| ||||||||| |||||| ||||||||||| |||| ||||||||||||||    
T  1529 cttagggggccaaaatctcaactttgtgaaagttagggggctaaaactgctattaa 1474  T

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Target: scaffold0515 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 3697 - 3642
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| |||||||||||||||| | ||||||||| |||| ||||||||||||||    
T  3697 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 3642  T

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Target: scaffold0417 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 9603 - 9650
Alignment:
Q  189 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaaac 236  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||    
T  9603 caaaatcgcaacttcgtgaaagttaggaggtgaaaactgctattaaac 9650  T

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Target: scaffold0417; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 9511 - 9431
Alignment:
Q  65 taacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa-ttggtcttgggggccaaaactgccacatg 144  Q
    ||||| ||| ||||||||||| | || |||||||  ||||||  ||||||| ||| ||||||||||||||||| |||||||    
T  9511 taacacgtgacacctcacttaggatgccacgtcagcgtagaccgagtcaaaattgatcttgggggccaaaactaccacatg 9431  T

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Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 3697 - 3642
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| |||||||||||||||| | ||||||||| |||| ||||||||||||||    
T  3697 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 3642  T

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Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 19098 - 19043
Alignment:
Q  179 cttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||||||| ||||| |||||||||||||||||  ||||||||||| |||||||    
T  19098 cttagggagccgaaatcacaacttcgtgaaagttaaggggcgaaaactactattaa 19043  T

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Target: scaffold0025; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 19218 - 19272
Alignment:
Q  113 aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggtggtttt 165  Q
    ||||||| |||||||||||||||| |||||  |||||||||||||||| ||||||    
T  19218 aaattggccttgggggccaaaactaccacatgtgcaaaacttagggggcggtttt 19272  T

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Target: scaffold0735 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 6117 - 6063
Alignment:
Q  180 ttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    |||||| | ||||||| ||||||||||||||||||||||| |||||| |||||||    
T  6117 ttagggggtcaaaatcacaacttcgtgaaagttagagggcaaaaactactattaa 6063  T

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Target: scaffold0166 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 21891 - 21754
Alignment:
Q  2 ccataagttttgcaactgtagcagttttggcaccccaatatcaatttttggtaaaaaagaaaataacatgtggcacctcacttaaggtgtcacgtcaatg 101  Q
    ||||||||||| ||||||||  ||||||||| ||  |||   |||||||||||||||  ||||||||| ||| || |||||||  |||| |||||||  |    
T  21891 ccataagttttacaactgtattagttttggctccttaatgctaatttttggtaaaaa--aaaataacacgtgacaactcacttggggtgccacgtcagcg 21794  T
Q  102 tagacaaagtc-aaattggtcttgggggccaaaactgcca 140  Q
    |||||  |||| |||||||| |||||  ||||||||||||    
T  21793 tagaccgagtcaaaattggttttgggaaccaaaactgcca 21754  T

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Target: scaffold0372 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 300 - 246
Alignment:
Q  61 aaaataacatgtggcacctcacttaaggtgtcacgtcaatgtagacaaagtcaaa 115  Q
    ||||||| | ||||||||||||||| |||||||||||| |||||||  |||||||    
T  300 aaaataatacgtggcacctcacttagggtgtcacgtcagtgtagaccgagtcaaa 246  T

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Target: scaffold0372; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 179 - 127
Alignment:
Q  182 agggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaa 234  Q
    ||||||| ||||||||||||| | |||||||||  ||| ||||||||||||||    
T  179 agggagcaaaaatcgcaactttgagaaagttaggaggctaaaactgctattaa 127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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