View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17264_low_49 (Length: 290)

Name: NF17264_low_49
Description: NF17264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17264_low_49
NF17264_low_49
[»] scaffold0257 (1 HSPs)
scaffold0257 (20-280)||(18327-18587)
[»] chr3 (20 HSPs)
chr3 (20-280)||(28509773-28510036)
chr3 (20-280)||(28184771-28185034)
chr3 (21-280)||(28480591-28480853)
chr3 (20-277)||(28082712-28082972)
chr3 (20-191)||(28148993-28149167)
chr3 (78-280)||(28160219-28160424)
chr3 (45-161)||(28134729-28134845)
chr3 (20-273)||(28054393-28054643)
chr3 (20-273)||(28064818-28065068)
chr3 (20-148)||(27979596-27979724)
chr3 (63-148)||(11420153-11420238)
chr3 (20-148)||(28151056-28151184)
chr3 (20-134)||(28003328-28003442)
chr3 (21-81)||(28507044-28507104)
chr3 (20-102)||(27919514-27919596)
chr3 (20-75)||(28161137-28161192)
chr3 (20-105)||(26114056-26114141)
chr3 (42-94)||(17745345-17745397)
chr3 (42-94)||(19046665-19046717)
chr3 (42-104)||(27459748-27459810)
[»] chr7 (1 HSPs)
chr7 (20-161)||(8692911-8693052)


Alignment Details
Target: scaffold0257 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 20 - 280
Target Start/End: Complemental strand, 18587 - 18327
Alignment:
Q  20 atatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttgttgctgcatcgattttt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18587 atatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttgttgctgcatcgattttt 18488  T
Q  120 cattcatcaactcctgtaacaagaacataagcattaatgatcaaatattaattacatccattaaatatctaatggaatttgacatggcctgcaaattaca 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18487 cattcatcaactcctgtaacaagaacataagcattaatgatcaaatattaattacatccattaaatatctaatggaatttgacatggcctgcaaattaca 18388  T
Q  220 tctggatttgttggtatttctaaaccaggaacattttcgacaagttcatgctctgtctctg 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18387 tctggatttgttggtatttctaaaccaggaacattttcgacaagttcatgctctgtctctg 18327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 20 - 280
Target Start/End: Original strand, 28509773 - 28510036
Alignment:
Q  20 atatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttgttgctgcatcgattttt 119  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||  ||| | |||||||||| |||||||||||| |||||||| ||    
T  28509773 atatgcacaatgcggtggtacgatattacttgatttacctgagaaggtttgacggcagaatcggcttctccaagtagacgttgttgctccatcgattgtt 28509872  T
Q  120 cattcatcaactcctgtaacaagaacataagcattaatga---tcaaatattaattacatccattaaatatctaatggaatttgacatggcctgcaaatt 216  Q
    ||||||||||||||||||||||| |||||||||||||| |   |||  ||||||||||||||||| ||  |||||   |||||||||||||||| ||||     
T  28509873 cattcatcaactcctgtaacaagcacataagcattaattatcttcagctattaattacatccattcaaattctaacacaatttgacatggcctggaaatc 28509972  T
Q  217 acatctggatttgttggtatttctaaaccaggaacattttcgacaagttcatgctctgtctctg 280  Q
    || | || ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  28509973 acttttgaatttgttggtatttctaaatcaggaacattttccacaagttcatgctctgtctctg 28510036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 20 - 280
Target Start/End: Complemental strand, 28185034 - 28184771
Alignment:
Q  20 atatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttgttgctgcatcgattttt 119  Q
    |||||||||| ||||| ||| || ||||||||||||||||||||||||||||||| | |||||| |||||||||| ||||||| |||| ||| |||| ||    
T  28185034 atatgcacaacgcggtggtacgacattacatgatttacctgagaaggtttgacggtagtatcaggttctccaagtagacgttgctgctccattgattgtt 28184935  T
Q  120 cattcatcaactcctgtaacaagaacataagcattaatgatc---aaatattaattacatccattaaatatctaatggaatttgacatggcctgcaaatt 216  Q
    ||||||||||||||||||||||||||| ||||| ||||||||   |  ||||||||||||||||||||  ||||| | | |||||||||||||| ||||     
T  28184934 cattcatcaactcctgtaacaagaacagaagcaataatgatcttcagctattaattacatccattaaaattctaacgcagtttgacatggcctggaaatc 28184835  T
Q  217 acatctggatttgttggtatttctaaaccaggaacattttcgacaagttcatgctctgtctctg 280  Q
    || | || ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  28184834 acttttgaatttgttggtatttctaaatcaggaacattttccacaagttcatgctctgtctctg 28184771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 21 - 280
Target Start/End: Original strand, 28480591 - 28480853
Alignment:
Q  21 tatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttgttgctgcatcgatttttc 120  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| | |||| | |||||||||| |||||||||||| ||| |||| ||     
T  28480591 tatgcacaatgcggtggtacgatattacatgatttacctgagaaggtttgacgggagtatcggcttctccaagtagacgttgttgctccatagattgttg 28480690  T
Q  121 attcatcaactcctgtaacaagaacataagcattaatga---tcaaatattaattacatccattaaatatctaatggaatttgacatggcctgcaaatta 217  Q
    |||||||||||||||||||||| |||||||||||||| |   |||  ||||||||||||||||| ||  |||||   |||||||||||||||| |||| |    
T  28480691 attcatcaactcctgtaacaagcacataagcattaattatcttcagctattaattacatccattcaaattctaacacaatttgacatggcctggaaatca 28480790  T
Q  218 catctggatttgttggtatttctaaaccaggaacattttcgacaagttcatgctctgtctctg 280  Q
    | | || ||||||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||    
T  28480791 cttttgaatttgttggtatttctaaatcagtaacattttccacaagttcatgctctgtttctg 28480853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 20 - 277
Target Start/End: Complemental strand, 28082972 - 28082712
Alignment:
Q  20 atatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttgttgctgcatcgattttt 119  Q
    ||||||||||||   | ||| |||||| |||||||||||||| |||||||||||||| ||||||||||||||| | |||||||||| | ||| | || ||    
T  28082972 atatgcacaatgtattggtatgatattgcatgatttacctgaaaaggtttgacggcagtatcagtttctccaactagacgttgttggtccattgtttgtt 28082873  T
Q  120 cattcatcaactcctgtaacaagaacataagcattaatga---tcaaatattaattacatccattaaatatctaatggaatttgacatggcctgcaaatt 216  Q
    ||||||||||||||||| ||||||||| ||||||||| ||   |||   ||| || ||||||||||||  ||||| | |||| ||||||||||| ||||     
T  28082872 cattcatcaactcctgttacaagaacagaagcattaacgatcttcagcgattcataacatccattaaaattctaaggcaattcgacatggcctggaaatc 28082773  T
Q  217 acatctggatttgttggtatttctaaaccaggaacattttcgacaagttcatgctctgtct 277  Q
    || | || ||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  28082772 acttttgaatttgttggtatttctaaatcaggaacattttccacaagttcatgctctgtct 28082712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 28149167 - 28148993
Alignment:
Q  20 atatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttgttgctgcatcgattttt 119  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | ||| |||  ||    
T  28149167 atatgcacaatgcggtggtacgatattacatgatttacctgagaaggtttgacggcagtatcagtttctccaagtgaacgttgttggtccattgatcgtt 28149068  T
Q  120 cattcatcaactcctgtaacaagaacataagcattaatgatc---aaatattaattacatccattaaatatctaa 191  Q
    ||||||||||||||||||||||||||||| ||||||||||||   |  |||||||| |||| |||||||||||||    
T  28149067 cattcatcaactcctgtaacaagaacataggcattaatgatcttcagctattaattgcatcaattaaatatctaa 28148993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 78 - 280
Target Start/End: Complemental strand, 28160424 - 28160219
Alignment:
Q  78 tatcagtttctccaagtggacgttgttgctgcatcgatttttcattcatcaactcctgtaacaagaacataagcattaatgatc---aaatattaattac 174  Q
    |||||| |||||||||| ||||||| || | |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||   |  ||||||||||    
T  28160424 tatcaggttctccaagtagacgttgctgttccatcgattgttcattcatcaactcctgtaacaagaacagaagcaataatgatcttcagctattaattac 28160325  T
Q  175 atccattaaatatctaatggaatttgacatggcctgcaaattacatctggatttgttggtatttctaaaccaggaacattttcgacaagttcatgctctg 274  Q
    ||||||||||  ||||| | | |||||||||||||| |||| || | || ||||||||||||||||||| | ||||||||||| ||||||||||||||||    
T  28160324 atccattaaaattctaacgcagtttgacatggcctggaaatcacttttgaatttgttggtatttctaaatcgggaacattttccacaagttcatgctctg 28160225  T
Q  275 tctctg 280  Q
    ||||||    
T  28160224 tctctg 28160219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 28134845 - 28134729
Alignment:
Q  45 ttacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttgttgctgcatcgatttttcattcatcaactcctgtaacaagaa 144  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||||||| ||||||||| | ||| |||| |||||||||||||||||||||||||||    
T  28134845 ttacacgatttacctgagaaggtttgacggaagtatcagtttctccaagtgaacgttgttggtccattgattgttcattcatcaactcctgtaacaagaa 28134746  T
Q  145 cataagcattaatgatc 161  Q
    |||||||||||||||||    
T  28134745 cataagcattaatgatc 28134729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 273
Target Start/End: Complemental strand, 28054643 - 28054393
Alignment:
Q  20 atatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttgttgctgcatcgattttt 119  Q
    |||||||| |||| || |||  ||| ||||||||||||||||||||||||||||||| ||||| ||||||||| | || |  |||||| |||| ||  ||    
T  28054643 atatgcacgatgcagtggtacaataatacatgatttacctgagaaggtttgacggcagtatcaatttctccaaattgatgaagttgcttcatcaatagtt 28054544  T
Q  120 cattcatcaactcctgtaacaagaacataagcattaatgatcaaa---tattaattacatccattaaatatctaatggaatttgacatggcctgcaaatt 216  Q
    |||  |||      ||||| ||||||| |||| |||| ||||      |||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  28054543 catggatc------tgtaataagaacaaaagctttaacgatcttccgctattaattacatccattaaataactaatggaattttccatggcctgcaaatt 28054450  T
Q  217 acatctggatttgttggtatttctaaaccaggaacattttcgacaagttcatgctct 273  Q
    || ||||  ||||||||||||| ||||   ||||||||||| | |||||||| ||||    
T  28054449 acttctgagtttgttggtatttttaaatatggaacattttcaataagttcattctct 28054393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 273
Target Start/End: Complemental strand, 28065068 - 28064818
Alignment:
Q  20 atatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttgttgctgcatcgattttt 119  Q
    |||||||| |||| || |||  ||| ||||||||||||||||||||||||||||||| ||||| ||||||||| | || |  |||||| |||| ||  ||    
T  28065068 atatgcacgatgcagtggtacaataatacatgatttacctgagaaggtttgacggcagtatcaatttctccaaattgatgaagttgcttcatcaatagtt 28064969  T
Q  120 cattcatcaactcctgtaacaagaacataagcattaatgatcaaa---tattaattacatccattaaatatctaatggaatttgacatggcctgcaaatt 216  Q
    |||  |||      ||||| ||||||| |||| |||| ||||      |||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  28064968 catggatc------tgtaataagaacaaaagctttaacgatcttccgctattaattacatccattaaataactaatggaattttccatggcctgcaaatt 28064875  T
Q  217 acatctggatttgttggtatttctaaaccaggaacattttcgacaagttcatgctct 273  Q
    || ||||  ||||||||||||| ||||   ||||||||||| | |||||||| ||||    
T  28064874 acttctgagtttgttggtatttttaaatatggaacattttcaataagttcattctct 28064818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 27979724 - 27979596
Alignment:
Q  20 atatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttgttgctgcatcgattttt 119  Q
    |||| ||||||| ||| |||  ||||||||| |||| |  ||||||||||||||| |  ||||||||||||||||||||||||||||| |||   || ||    
T  27979724 atattcacaatgaggtggtactatattacattattttctggagaaggtttgacggtagcatcagtttctccaagtggacgttgttgctccatttgttgtt 27979625  T
Q  120 cattcatcaactcctgtaacaagaacata 148  Q
    ||| ||||||||||||||| |||||||||    
T  27979624 catccatcaactcctgtaataagaacata 27979596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 11420238 - 11420153
Alignment:
Q  63 aaggtttgacggcaatatcagtttctccaagtggacgttgttgctgcatcgatttttcattcatcaactcctgtaacaagaacata 148  Q
    |||||||||||| |  ||||||||| ||||||||||||||||||| ||| | || ||||||||||||||||||||| | |||||||    
T  11420238 aaggtttgacggtagcatcagtttcaccaagtggacgttgttgctccattggttgttcattcatcaactcctgtaatatgaacata 11420153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 28151184 - 28151056
Alignment:
Q  20 atatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttgttgctgcatcgattttt 119  Q
    |||||||||||| ||| |||  ||||||||| |||| | |||||||||||||||| |  |||| |||||||| || |||||| ||||| |||   || ||    
T  28151184 atatgcacaatgaggtggtactatattacattattttcttgagaaggtttgacggtagcatcaatttctccacgtagacgtttttgctccatttcttgtt 28151085  T
Q  120 cattcatcaactcctgtaacaagaacata 148  Q
    ||||||||||||||||||  |||||||||    
T  28151084 cattcatcaactcctgtagtaagaacata 28151056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 28003442 - 28003328
Alignment:
Q  20 atatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttgttgctgcatcgattttt 119  Q
    |||||||| ||| ||| |||  ||||||||| |||| | |||||||||||||||| |  |||||||||||||||| |||||| ||||| |||   || ||    
T  28003442 atatgcacgatgaggtggtactatattacattattttcttgagaaggtttgacggtagcatcagtttctccaagtagacgtttttgctccatttcttgtt 28003343  T
Q  120 cattcatcaactcct 134  Q
    |||||||||||||||    
T  28003342 cattcatcaactcct 28003328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 28507044 - 28507104
Alignment:
Q  21 tatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggcaatatc 81  Q
    ||||||||||| ||| ||| |||||||||||||||||| ||||||||||||||||| ||||    
T  28507044 tatgcacaatgtggtggtacgatattacatgatttaccggagaaggtttgacggcagtatc 28507104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 27919596 - 27919514
Alignment:
Q  20 atatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttg 102  Q
    |||| ||||||| ||| |||  ||||||||| |||| | |||||||||||||||| | ||||| |||||||||||||||||||    
T  27919596 atattcacaatgaggtggtactatattacattattttcttgagaaggtttgacggtagtatcaatttctccaagtggacgttg 27919514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 28161192 - 28161137
Alignment:
Q  20 atatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggc 75  Q
    |||||||||| |||||  || || ||||||||||||||||||||||||||||||||    
T  28161192 atatgcacaacgcggtgttacgacattacatgatttacctgagaaggtttgacggc 28161137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 26114056 - 26114141
Alignment:
Q  20 atatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttgttg 105  Q
    |||||||||||| | | |||  ||||||||| || | | ||||||||||||| || | |||||||||||||||||||| |||||||    
T  26114056 atatgcacaatgagatggtactatattacattatcttcttgagaaggtttgatggtagtatcagtttctccaagtggatgttgttg 26114141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 17745345 - 17745397
Alignment:
Q  42 atattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagt 94  Q
    ||||||||| |||| |||||||||||||||||| |  ||||||||||||||||    
T  17745345 atattacattattttcctgagaaggtttgacggtagcatcagtttctccaagt 17745397  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 19046665 - 19046717
Alignment:
Q  42 atattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagt 94  Q
    ||||||||| |||| |||||||||||||||||| |  ||||||||||||||||    
T  19046665 atattacattattttcctgagaaggtttgacggtagcatcagtttctccaagt 19046717  T

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Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 27459748 - 27459810
Alignment:
Q  42 atattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttgtt 104  Q
    ||||||||| |||| |||||||||||||||||  |  |||||||||| ||||||||| |||||    
T  27459748 atattacattattttcctgagaaggtttgacgctagcatcagtttctgcaagtggacattgtt 27459810  T

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Target: chr7 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 8692911 - 8693052
Alignment:
Q  20 atatgcacaatgcggttgtaggatattacatgatttacctgagaaggtttgacggcaatatcagtttctccaagtggacgttgttgctgcatcgattttt 119  Q
    ||||||||||||| || ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  | |||||||| ||    
T  8692911 atatgcacaatgcagtggtacgatattacatgatttacctgagaaggtttgccggcaatatcagtttctccaagtggacgttgtttgtccatcgattgtt 8693010  T
Q  120 cattcatcaactcctgtaacaagaacataagcattaatgatc 161  Q
    |||||||||| |||||||||||||||| ||||||||||||||    
T  8693011 cattcatcaattcctgtaacaagaacagaagcattaatgatc 8693052  T

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