View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17265_low_27 (Length: 428)
Name: NF17265_low_27
Description: NF17265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17265_low_27 |
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Alignment Details
Target: chr4 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 55 - 412
Target Start/End: Complemental strand, 35121337 - 35120982
Alignment:
| Q |
55 |
acattttccaaccgagtgcagaaatatatgaaaggaacattaaaagggtacatgacttgttcggtcaaagaaaaagagaacatttgtattttacaatata |
154 |
Q |
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| T |
35121337 |
acattttccaaccgagtgcagaaatatatgaaaggaacattaaaagggtacatgacttgttcggtcaaagaaaaagagaacatttgtattttacaatata |
35121238 |
T |
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| Q |
155 |
agnnnnnnnnnnnnngacaaaacaatagtataagttaattattcattaactaaatgataatttttagtcaaactaatataatataatgacagaattttat |
254 |
Q |
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| T |
35121237 |
agttttttgttttttgacaaaacaata---taagttaattattcattaactaaatgataatttttagtcaaactaatataatataatgacagaattttat |
35121141 |
T |
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| Q |
255 |
acctctttcctgttacctttttaattatacatctgannnnnnn-gctgttaattaacaaaagttaattaaaagaacaatagcataagtcagatattttga |
353 |
Q |
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| T |
35121140 |
acctctttcctgttacctttttaattatacatccgattttttttgctgttaattaacaaaagttaattgaaagaacaatagcataagtcagatattttga |
35121041 |
T |
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| Q |
354 |
tatgatcgagtataacatattagattctatttaatatataagtgcataagagataaatt |
412 |
Q |
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| T |
35121040 |
tatgatcgagtataacatattagattctatttaatatataagtgcataagagataaatt |
35120982 |
T |
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