View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17265_low_46 (Length: 329)
Name: NF17265_low_46
Description: NF17265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17265_low_46 |
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Alignment Details
Target: chr3 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 313
Target Start/End: Original strand, 37776366 - 37776678
Alignment:
| Q |
1 |
gaaaattatgtttttcgtcttgtttggatgctgttaattttttattgacaataaaatggagccattcattttcactctcaactatagtgcagatgttgca |
100 |
Q |
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| T |
37776366 |
gaaaattatgtttttcgtcttgttcggatgctgttaattttttattgacaataaaatggagccattcattttcactctcaagtatattgcagatgttgca |
37776465 |
T |
|
| Q |
101 |
catgcttatgttacaagatgtaaggtttgttacatttactttttagcagtatatttttgtaatctcagttcatgttttctttggaaaatcagaaacaata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
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| T |
37776466 |
catgcttatgttacaagatgtaaggtttgttacatttactttttagcagtatatttttttaatctcagttcatgttttctttggaaaatcagaaacatta |
37776565 |
T |
|
| Q |
201 |
tgtttgtccattttcttgcgtgagacatgtagaaaactattgtttttcatcctataaatatgatgttattagcatgacttctaaactgtttttgaagtca |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
37776566 |
tgtttgtccattttcttgcgtgagacatgtagaaaactattgtttttcatcctataaatatgatgttattagcgtgacttctaaactgtttttgaagtca |
37776665 |
T |
|
| Q |
301 |
tatagaagccatg |
313 |
Q |
| |
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||||||||||||| |
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| T |
37776666 |
tatagaagccatg |
37776678 |
T |
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