View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17265_low_49 (Length: 317)
Name: NF17265_low_49
Description: NF17265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17265_low_49 |
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Alignment Details
Target: chr8 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 11 - 299
Target Start/End: Original strand, 8277103 - 8277391
Alignment:
| Q |
11 |
cacagacagcatagagccaattttaccaaaattccggtattcagaaccaacaaaagaaggattcttattcagaaatcaagcttgtgaggcaatgcatgaa |
110 |
Q |
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| T |
8277103 |
cacagacagcatagagccaattttaccaaaattccggtattcagaaccaacaaaagaaggattcttattcagaaatcaagcttgtgaggcaatgcatgaa |
8277202 |
T |
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| Q |
111 |
tcttacacagaagtgattcatgaagttaaacacaaagatgttggcacagaaatgactccattgggaagttccacaacttcaagatgtcacacaccattca |
210 |
Q |
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| T |
8277203 |
tcttacacagaagtgattcatgaagttaaacacaaagatgttggcacagaaatgactccattaggaagttccacaacttcaagatgtcacacaccattca |
8277302 |
T |
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| Q |
211 |
agagttcatcgcctgcgcgccataacactcctgctagtaggtcaggaccattggcattatctaacattgacagcaatggatgcagtgtt |
299 |
Q |
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| T |
8277303 |
agagttcatcgcctgcgcgccataacactcctgctagtaggtcaggaccattggcattatctaacattgacagcaatggatgcagtgtt |
8277391 |
T |
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