View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17265_low_52 (Length: 295)

Name: NF17265_low_52
Description: NF17265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17265_low_52
NF17265_low_52
[»] chr5 (5 HSPs)
chr5 (18-179)||(6006730-6006893)
chr5 (131-178)||(6007655-6007702)
chr5 (142-177)||(26712400-26712435)
chr5 (142-177)||(26982138-26982173)
chr5 (132-180)||(4874582-4874630)
[»] chr4 (3 HSPs)
chr4 (18-178)||(33464459-33464619)
chr4 (179-280)||(8062867-8062968)
chr4 (146-180)||(34155642-34155676)
[»] chr6 (4 HSPs)
chr6 (51-181)||(29647320-29647452)
chr6 (51-173)||(23593120-23593241)
chr6 (142-178)||(16764925-16764961)
chr6 (142-178)||(25371169-25371205)
[»] chr2 (5 HSPs)
chr2 (25-179)||(8146549-8146704)
chr2 (38-164)||(30545345-30545469)
chr2 (38-164)||(44154290-44154415)
chr2 (142-181)||(36390954-36390993)
chr2 (131-172)||(8145550-8145591)
[»] chr1 (6 HSPs)
chr1 (51-172)||(49420090-49420210)
chr1 (37-181)||(51051213-51051357)
chr1 (132-183)||(50950897-50950948)
chr1 (131-178)||(51606914-51606961)
chr1 (142-178)||(4641774-4641810)
chr1 (131-179)||(41884230-41884278)
[»] chr8 (4 HSPs)
chr8 (51-178)||(35840452-35840578)
chr8 (138-178)||(35839722-35839762)
chr8 (142-179)||(35943075-35943112)
chr8 (68-120)||(5873222-5873274)
[»] chr3 (5 HSPs)
chr3 (142-178)||(33968181-33968217)
chr3 (131-184)||(19691754-19691807)
chr3 (131-180)||(33455782-33455831)
chr3 (142-179)||(53714428-53714465)
chr3 (131-179)||(17026883-17026931)
[»] chr7 (3 HSPs)
chr7 (142-179)||(6730169-6730206)
chr7 (131-180)||(42607813-42607862)
chr7 (132-172)||(40740666-40740706)


Alignment Details
Target: chr5 (Bit Score: 113; Significance: 3e-57; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 6006893 - 6006730
Alignment:
Q  18 aaaactggatccgagacaagtgagccaccatgaagaagagagtgtgaaatatattgtgtggagaaaccatcataaaatgtgtgcacctttttaatctaat 117  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  6006893 aaaactggatccgagacaagtgagccaccatggagaagagagtgtgaaatatatggtctggagaaaccatcataaaatgtgtgcacctttttaatctaat 6006794  T
Q  118 ggtt--nnnnnnnngctttcctatcatgggaaacaagttccctttcccatgctaaactccacct 179  Q
    ||||           |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6006793 ggttaaaaaaaaaaactttcctatcatgggaaacaagttccctttcccatgctaaactccacct 6006730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 6007655 - 6007702
Alignment:
Q  131 ctttcctatcatgggaaacaagttccctttcccatgctaaactccacc 178  Q
    |||||| |||||||||||||| ||||||||||||| |||||| |||||    
T  6007655 ctttcccatcatgggaaacaaattccctttcccattctaaaccccacc 6007702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 177
Target Start/End: Original strand, 26712400 - 26712435
Alignment:
Q  142 tgggaaacaagttccctttcccatgctaaactccac 177  Q
    |||||||||| |||||||||||||||||||||||||    
T  26712400 tgggaaacaacttccctttcccatgctaaactccac 26712435  T

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Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 177
Target Start/End: Original strand, 26982138 - 26982173
Alignment:
Q  142 tgggaaacaagttccctttcccatgctaaactccac 177  Q
    |||||||||| |||||||||||||||||||||||||    
T  26982138 tgggaaacaacttccctttcccatgctaaactccac 26982173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 4874630 - 4874582
Alignment:
Q  132 tttcctatcatgggaaacaagttccctttcccatgctaaactccaccta 180  Q
    ||||| |||||||||||||| || || ||||||||||||| ||||||||    
T  4874630 tttcccatcatgggaaacaattttccattcccatgctaaattccaccta 4874582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 3e-57; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 178
Target Start/End: Original strand, 33464459 - 33464619
Alignment:
Q  18 aaaactggatccgagacaagtgagccaccatgaagaagagagtgtgaaatatattgtgtggagaaaccatcataaaatgtgtgcacctttttaatctaat 117  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33464459 aaaactggatccgagacaagtgagccaccatggagaagagagtgtgaaatatatggtgtggagaaaccatcataaaatgtgtgcacctttttaatctaat 33464558  T
Q  118 ggttnnnnnnnngctttcctatcatgggaaacaagttccctttcccatgctaaactccacc 178  Q
    ||||          ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  33464559 ggttaaaaaaaaaatttcctatcataggaaacaagtttcctttcccatgctaaactccacc 33464619  T

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Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 179 - 280
Target Start/End: Original strand, 8062867 - 8062968
Alignment:
Q  179 taagatgagtgtcattgatgaaaatcaaaactgaatcttttaacatgagattcaaaccaatgtcatagaataaggtgcaagaaatccccaatcagaataa 278  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||  ||| || |||||||||||||||| | |||||    
T  8062867 taagatgagtgtcattgatgaaaatcaaaattgaatcctttaacatgagattcaaaccaatgtcataagatagggagcaagaaatccccaattaaaataa 8062966  T
Q  279 ga 280  Q
    ||    
T  8062967 ga 8062968  T

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Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 180
Target Start/End: Original strand, 34155642 - 34155676
Alignment:
Q  146 aaacaagttccctttcccatgctaaactccaccta 180  Q
    ||||||||||||||||||||||||||| |||||||    
T  34155642 aaacaagttccctttcccatgctaaaccccaccta 34155676  T

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Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 29647452 - 29647320
Alignment:
Q  51 agaagagagtgtgaaatatattgtgtggagaaaccatcataaaatgtgtgcacctttttaatcta--atggttnnnnnnnngctttcctatcatgggaaa 148  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||  || |||         |||||||||||| |||||    
T  29647452 agaagagagtgtgaaatatatggtgtggagaaaccatcataaaatatgtgcacctctttaatctaatatagttaaaaaaaaactttcctatcataggaaa 29647353  T
Q  149 caagttccctttcccatgctaaactccacctaa 181  Q
    |||||||||||||||||||||||||||||||||    
T  29647352 caagttccctttcccatgctaaactccacctaa 29647320  T

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Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 173
Target Start/End: Complemental strand, 23593241 - 23593120
Alignment:
Q  51 agaagagagtgtgaaatatattgtgtggagaaaccatcataaaatgtgtgcacctttttaatctaatggttnnnnnnnngctttcctatcatgggaaaca 150  Q
    ||||||||||||||||||||| |||  || | |||||||||||||||||| |||| |||||| |||| | |         |||||| |||||||||||||    
T  23593241 agaagagagtgtgaaatatatggtgcagacataccatcataaaatgtgtgtacctctttaatgtaatag-tcaaaaaaaactttcccatcatgggaaaca 23593143  T
Q  151 agttccctttcccatgctaaact 173  Q
    | ||||| |||||||||||||||    
T  23593142 acttcccattcccatgctaaact 23593120  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 16764961 - 16764925
Alignment:
Q  142 tgggaaacaagttccctttcccatgctaaactccacc 178  Q
    |||||||||| || |||||||||||||||||||||||    
T  16764961 tgggaaacaactttcctttcccatgctaaactccacc 16764925  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 25371205 - 25371169
Alignment:
Q  142 tgggaaacaagttccctttcccatgctaaactccacc 178  Q
    |||||||||||||| |||||||||||||||| |||||    
T  25371205 tgggaaacaagttcactttcccatgctaaaccccacc 25371169  T

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Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 179
Target Start/End: Original strand, 8146549 - 8146704
Alignment:
Q  25 gatccgagacaa---gtgagccaccatgaagaagagagtgtgaaatatattgtgtggagaaaccatcataaaatgtgtgcacctttttaatctaatggtt 121  Q
    ||||||||||||   ||||||||| ||| ||||||||| | ||||||||| ||||||| ||||||||||||||||| ||||||| |||||||||||||||    
T  8146549 gatccgagacaaattgtgagccactatggagaagagaggg-gaaatatatggtgtggacaaaccatcataaaatgtatgcacctctttaatctaatggtt 8146647  T
Q  122 nnnnnnnngctttcctatcatgggaaacaagttccctttcccatgctaaactccacct 179  Q
             |||||| ||||||| |||||| |||||||||||||| |||||| |||||    
T  8146648 aaaaaaaa-ctttcccatcatggaaaacaacttccctttcccatgttaaacttcacct 8146704  T

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Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 164
Target Start/End: Original strand, 30545345 - 30545469
Alignment:
Q  38 tgagccaccatgaagaagagagtgtgaaatatattgtgtggagaaaccatcataaaatgtgtgcacctttttaatctaatggttnnnnnnnngctttcct 137  Q
    |||||||| ||| ||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||         ||||||     
T  30545345 tgagccactatggagaagagaggg-gaaatatatggtgtggacaaaccatcataaaatgtgtgcacctctttaatctaatggttaaaaaaaa-ctttccc 30545442  T
Q  138 atcatgggaaacaagttccctttccca 164  Q
    |||||||||||||| ||||||||||||    
T  30545443 atcatgggaaacaacttccctttccca 30545469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 164
Target Start/End: Complemental strand, 44154415 - 44154290
Alignment:
Q  38 tgagccaccatgaagaagagagtgtgaaatatattgtgtggagaaaccatcataaaatgtgtgcacctttttaatctaatggttnnnnnnnngctttcct 137  Q
    |||||||| ||| ||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||| |||||| ||||||||         |||||      
T  44154415 tgagccactatggagaagagaggg-gaaatatatggtgtggacaaaccatcataaaatgtgtgcacctctttaatttaatggttaaaaaaaaactttcac 44154317  T
Q  138 atcatgggaaacaagttccctttccca 164  Q
    |||||||||||||| ||||||||||||    
T  44154316 atcatgggaaacaacttccctttccca 44154290  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 36390993 - 36390954
Alignment:
Q  142 tgggaaacaagttccctttcccatgctaaactccacctaa 181  Q
    |||||||||| |||||||||||||||||||| ||||||||    
T  36390993 tgggaaacaacttccctttcccatgctaaaccccacctaa 36390954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 8145591 - 8145550
Alignment:
Q  131 ctttcctatcatgggaaacaagttccctttcccatgctaaac 172  Q
    |||||||||||| |||||||| ||||||| ||||||||||||    
T  8145591 ctttcctatcataggaaacaacttcccttccccatgctaaac 8145550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 51 - 172
Target Start/End: Complemental strand, 49420210 - 49420090
Alignment:
Q  51 agaagagagtgtgaaatatattgtgtggagaaaccatcataaaatgtgtgcacctttttaatctaatggttnnnnnnnngctttcctatcatgggaaaca 150  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||||||||||| ||||||||||||| |        ||||||| |||||||||||||    
T  49420210 agaagacagtgtgaaatatatggtgtggacagaccatcataaaatgtgtgcacctatttaatctaatgg-tcaaaaaaagctttcccatcatgggaaaca 49420112  T
Q  151 agttccctttcccatgctaaac 172  Q
    | || |||||||||| ||||||    
T  49420111 actttcctttcccatactaaac 49420090  T

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Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 181
Target Start/End: Original strand, 51051213 - 51051357
Alignment:
Q  37 gtgagccaccatgaagaagagagtgtgaaatatattgtgtggagaaaccatcataaaatgtgtgcacctttttaatctaatggttnnnnnnnngctttcc 136  Q
    ||||||||  ||| ||||||  ||||||||||||| |||  || | ||||||||||||||||||||||| ||||||||||||||          ||||||    
T  51051213 gtgagccataatggagaagaaggtgtgaaatatatggtgcagacataccatcataaaatgtgtgcacctctttaatctaatggtcaaaaaaaaactttcc 51051312  T
Q  137 tatcatgggaaacaagttccctttcccatgctaaactccacctaa 181  Q
     ||||||| ||| || ||||| ||||||||||||||| |||||||    
T  51051313 catcatggaaaataacttcccattcccatgctaaacttcacctaa 51051357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 50950897 - 50950948
Alignment:
Q  132 tttcctatcatgggaaacaagttccctttcccatgctaaactccacctaaga 183  Q
    ||||||||  |||||||||| ||||| |||||||||||||| ||||||||||    
T  50950897 tttcctatggtgggaaacaacttcccattcccatgctaaaccccacctaaga 50950948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 51606961 - 51606914
Alignment:
Q  131 ctttcctatcatgggaaacaagttccctttcccatgctaaactccacc 178  Q
    |||||| |||||||||||||| || |||| ||||||||||||||||||    
T  51606961 ctttcccatcatgggaaacaactttccttgcccatgctaaactccacc 51606914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 4641774 - 4641810
Alignment:
Q  142 tgggaaacaagttccctttcccatgctaaactccacc 178  Q
    |||||||||| | ||||||||||||||||||||||||    
T  4641774 tgggaaacaattcccctttcccatgctaaactccacc 4641810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 41884230 - 41884278
Alignment:
Q  131 ctttcctatcatgggaaacaagttccctttcccatgctaaactccacct 179  Q
    |||||||||  |||||||||| |||||||| ||||||||||| ||||||    
T  41884230 ctttcctatggtgggaaacaatttcccttttccatgctaaaccccacct 41884278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 178
Target Start/End: Original strand, 35840452 - 35840578
Alignment:
Q  51 agaagagagtgtgaaatatattgtgtggagaaaccatcataaaatgtgtgcacctttttaatctaatggttnnnnnnnngctttcctatcatgggaaaca 150  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||||||||||| |||||||| |  ||          |||||| ||| |||||||||    
T  35840452 agaagacagtgtgaaatatatggtgtggacagaccatcataaaatgtgtgcacctctttaatctgacagtcaaaaaaaa-ctttcccatcgtgggaaaca 35840550  T
Q  151 agttccctttcccatgctaaactccacc 178  Q
    | |||||||||||||||||||| |||||    
T  35840551 acttccctttcccatgctaaaccccacc 35840578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 35839762 - 35839722
Alignment:
Q  138 atcatgggaaacaagttccctttcccatgctaaactccacc 178  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  35839762 atcatgggaaacaacttccctttcccatgctaaaccccacc 35839722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 35943112 - 35943075
Alignment:
Q  142 tgggaaacaagttccctttcccatgctaaactccacct 179  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  35943112 tgggaaacaacttccctttcccatgctaaaccccacct 35943075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 5873274 - 5873222
Alignment:
Q  68 atattgtgtggagaaaccatcataaaatgtgtgcacctttttaatctaatggt 120  Q
    |||| ||||||| | ||||||||||||| ||||  ||||||||||||||||||    
T  5873274 atatagtgtggacagaccatcataaaatatgtgttcctttttaatctaatggt 5873222  T

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Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 33968217 - 33968181
Alignment:
Q  142 tgggaaacaagttccctttcccatgctaaactccacc 178  Q
    ||||||||||||||||||||||||||||||| |||||    
T  33968217 tgggaaacaagttccctttcccatgctaaaccccacc 33968181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 19691754 - 19691807
Alignment:
Q  131 ctttcctatcatgggaaacaagttccctttcccatgctaaactccacctaagat 184  Q
    |||||| |||||||||||||| || || ||||||| |||||||||||| |||||    
T  19691754 ctttcccatcatgggaaacaactttccattcccattctaaactccacccaagat 19691807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 33455782 - 33455831
Alignment:
Q  131 ctttcctatcatgggaaacaagttccctttcccatgctaaactccaccta 180  Q
    |||||||||  |||||||||| | |||||||||||||||||| |||||||    
T  33455782 ctttcctatggtgggaaacaattcccctttcccatgctaaaccccaccta 33455831  T

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Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 53714428 - 53714465
Alignment:
Q  142 tgggaaacaagttccctttcccatgctaaactccacct 179  Q
    ||||||| || |||||||||||||||||||||||||||    
T  53714428 tgggaaagaatttccctttcccatgctaaactccacct 53714465  T

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Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 17026931 - 17026883
Alignment:
Q  131 ctttcctatcatgggaaacaagttccctttcccatgctaaactccacct 179  Q
    |||||| || ||||||||||| || ||||||||||| ||||||||||||    
T  17026931 ctttcccattatgggaaacaactttcctttcccatgttaaactccacct 17026883  T

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Target: chr7 (Bit Score: 30; Significance: 0.0000001; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 6730169 - 6730206
Alignment:
Q  142 tgggaaacaagttccctttcccatgctaaactccacct 179  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  6730169 tgggaaacaacttccctttcccatgctaaaccccacct 6730206  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 42607813 - 42607862
Alignment:
Q  131 ctttcctatcatgggaaacaagttccctttcccatgctaaactccaccta 180  Q
    ||||||||| ||||||||||| | |||||| ||||||||||| |||||||    
T  42607813 ctttcctatgatgggaaacaattccccttttccatgctaaaccccaccta 42607862  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 40740706 - 40740666
Alignment:
Q  132 tttcctatcatgggaaacaagttccctttcccatgctaaac 172  Q
    ||||| |||||||||||||| || |||||||||||||||||    
T  40740706 tttcccatcatgggaaacaattttcctttcccatgctaaac 40740666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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