View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17266_high_12 (Length: 332)

Name: NF17266_high_12
Description: NF17266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17266_high_12
NF17266_high_12
[»] chr7 (24 HSPs)
chr7 (1-252)||(18873169-18873420)
chr7 (1-247)||(15167984-15168230)
chr7 (1-243)||(10895795-10896037)
chr7 (9-251)||(14422802-14423043)
chr7 (1-258)||(12709833-12710090)
chr7 (1-258)||(13122904-13123161)
chr7 (9-247)||(16009395-16009631)
chr7 (8-258)||(13743526-13743774)
chr7 (39-258)||(12590633-12590850)
chr7 (39-258)||(13007281-13007497)
chr7 (51-245)||(16677152-16677348)
chr7 (51-245)||(17651388-17651584)
chr7 (192-258)||(21230949-21231015)
chr7 (192-247)||(11382871-11382926)
chr7 (192-247)||(11389348-11389403)
chr7 (192-258)||(20311039-20311107)
chr7 (128-247)||(13679428-13679548)
chr7 (193-248)||(2971254-2971309)
chr7 (193-248)||(20906461-20906516)
chr7 (193-247)||(11311059-11311113)
chr7 (212-253)||(831628-831669)
chr7 (212-253)||(1196808-1196849)
chr7 (212-253)||(34958578-34958619)
chr7 (191-247)||(46625961-46626017)
[»] chr5 (13 HSPs)
chr5 (1-252)||(22750950-22751201)
chr5 (9-259)||(38144525-38144773)
chr5 (9-247)||(28370055-28370291)
chr5 (9-247)||(19512204-19512441)
chr5 (39-252)||(23528479-23528690)
chr5 (183-247)||(18407944-18408008)
chr5 (192-258)||(22438736-22438803)
chr5 (183-247)||(23111200-23111264)
chr5 (193-248)||(19236900-19236955)
chr5 (133-259)||(34830024-34830150)
chr5 (192-259)||(42961566-42961633)
chr5 (195-248)||(22461158-22461211)
chr5 (195-248)||(22467782-22467835)
[»] chr3 (21 HSPs)
chr3 (1-247)||(14762758-14763004)
chr3 (1-245)||(38310802-38311046)
chr3 (15-245)||(20247791-20248021)
chr3 (8-245)||(24192771-24193009)
chr3 (9-247)||(9534146-9534382)
chr3 (9-248)||(23370505-23370743)
chr3 (57-248)||(24933828-24934016)
chr3 (12-245)||(55499104-55499337)
chr3 (39-258)||(41455087-41455304)
chr3 (79-258)||(16801457-16801635)
chr3 (186-247)||(18929239-18929300)
chr3 (183-247)||(17240513-17240577)
chr3 (193-248)||(13302240-13302295)
chr3 (193-248)||(13323787-13323842)
chr3 (134-248)||(10389443-10389557)
chr3 (134-248)||(10414532-10414646)
chr3 (134-248)||(10421202-10421316)
chr3 (193-248)||(12033444-12033499)
chr3 (193-248)||(13312896-13312951)
chr3 (193-248)||(17131732-17131787)
chr3 (193-248)||(51301589-51301644)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-258)||(11840-12097)
scaffold0026 (9-248)||(111504-111741)
[»] chr6 (23 HSPs)
chr6 (14-247)||(23057760-23057993)
chr6 (1-258)||(29614136-29614393)
chr6 (9-247)||(23839016-23839253)
chr6 (9-258)||(10986170-10986418)
chr6 (12-247)||(4477678-4477912)
chr6 (9-258)||(18800255-18800503)
chr6 (113-258)||(930085-930229)
chr6 (9-245)||(21565214-21565449)
chr6 (39-258)||(12168212-12168428)
chr6 (39-258)||(19287121-19287337)
chr6 (39-258)||(19785859-19786075)
chr6 (39-258)||(19878305-19878521)
chr6 (39-258)||(19884081-19884297)
chr6 (59-248)||(34639986-34640173)
chr6 (59-248)||(34646660-34646847)
chr6 (134-248)||(25469704-25469816)
chr6 (192-258)||(24512833-24512899)
chr6 (51-247)||(9187352-9187550)
chr6 (191-247)||(25397172-25397228)
chr6 (191-247)||(19471335-19471391)
chr6 (191-247)||(25348486-25348542)
chr6 (164-248)||(31252394-31252478)
chr6 (191-245)||(25598643-25598697)
[»] scaffold1773 (1 HSPs)
scaffold1773 (1-255)||(988-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-255)||(49989-50241)
[»] chr4 (12 HSPs)
chr4 (1-258)||(8045822-8046078)
chr4 (1-258)||(11847916-11848179)
chr4 (59-248)||(53483573-53483760)
chr4 (192-258)||(15408139-15408205)
chr4 (58-248)||(27906130-27906321)
chr4 (191-247)||(8834895-8834951)
chr4 (191-247)||(13888641-13888697)
chr4 (164-245)||(14486632-14486713)
chr4 (191-247)||(15245215-15245271)
chr4 (191-242)||(22724691-22724742)
chr4 (212-253)||(15747551-15747592)
chr4 (191-247)||(15308120-15308176)
[»] scaffold0029 (1 HSPs)
scaffold0029 (39-258)||(111728-111948)
[»] scaffold0924 (1 HSPs)
scaffold0924 (1-258)||(740-997)
[»] chr2 (17 HSPs)
chr2 (9-247)||(19661454-19661690)
chr2 (9-247)||(6483536-6483772)
chr2 (9-247)||(6487003-6487239)
chr2 (51-258)||(26583687-26583892)
chr2 (9-245)||(23089057-23089292)
chr2 (9-245)||(23878826-23879060)
chr2 (9-247)||(23101463-23101700)
chr2 (134-248)||(5706023-5706137)
chr2 (183-247)||(23265133-23265197)
chr2 (183-247)||(23280201-23280265)
chr2 (186-247)||(21908353-21908414)
chr2 (191-247)||(24661576-24661632)
chr2 (193-248)||(10577-10632)
chr2 (67-258)||(23168288-23168483)
chr2 (67-258)||(23579545-23579740)
chr2 (193-248)||(25180929-25180984)
chr2 (176-257)||(26885166-26885246)
[»] scaffold0025 (1 HSPs)
scaffold0025 (8-245)||(14398-14635)
[»] chr8 (15 HSPs)
chr8 (1-245)||(8727735-8727979)
chr8 (9-248)||(44477441-44477678)
chr8 (9-248)||(44492599-44492836)
chr8 (1-258)||(23866423-23866680)
chr8 (39-258)||(17054440-17054656)
chr8 (9-156)||(27940946-27941091)
chr8 (138-247)||(18614217-18614327)
chr8 (183-247)||(23482053-23482117)
chr8 (192-258)||(14056553-14056619)
chr8 (191-247)||(39364919-39364975)
chr8 (192-258)||(25111976-25112042)
chr8 (193-247)||(29643386-29643440)
chr8 (193-248)||(24320670-24320725)
chr8 (192-259)||(27940840-27940907)
chr8 (191-247)||(21931696-21931752)
[»] chr1 (12 HSPs)
chr1 (9-247)||(20437024-20437261)
chr1 (39-258)||(41111884-41112100)
chr1 (183-247)||(32651563-32651627)
chr1 (192-247)||(19663517-19663572)
chr1 (183-247)||(18712790-18712854)
chr1 (191-247)||(20805320-20805376)
chr1 (192-247)||(11158093-11158148)
chr1 (191-245)||(10811785-10811839)
chr1 (193-248)||(20851132-20851187)
chr1 (193-248)||(20857759-20857814)
chr1 (193-248)||(21706276-21706331)
chr1 (193-248)||(21710818-21710873)
[»] scaffold0553 (1 HSPs)
scaffold0553 (9-248)||(10195-10433)
[»] scaffold0544 (1 HSPs)
scaffold0544 (9-248)||(1525-1763)
[»] scaffold0117 (2 HSPs)
scaffold0117 (1-258)||(1887-2143)
scaffold0117 (1-258)||(8564-8820)
[»] scaffold0247 (1 HSPs)
scaffold0247 (9-258)||(11159-11407)
[»] scaffold0058 (1 HSPs)
scaffold0058 (8-258)||(109-356)
[»] scaffold0090 (1 HSPs)
scaffold0090 (8-259)||(17985-18236)
[»] scaffold0154 (1 HSPs)
scaffold0154 (51-258)||(30715-30923)
[»] scaffold0476 (1 HSPs)
scaffold0476 (9-245)||(3295-3531)
[»] scaffold0077 (1 HSPs)
scaffold0077 (9-245)||(3624-3859)
[»] scaffold0796 (2 HSPs)
scaffold0796 (57-253)||(1727-1920)
scaffold0796 (57-253)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (165-252)||(904-991)
scaffold0456 (165-252)||(8049-8136)
scaffold0456 (8-104)||(806-901)
scaffold0456 (8-104)||(7951-8046)
[»] scaffold0634 (1 HSPs)
scaffold0634 (1-88)||(3471-3558)
[»] scaffold0129 (1 HSPs)
scaffold0129 (136-254)||(45268-45386)
[»] scaffold0107 (1 HSPs)
scaffold0107 (192-258)||(40521-40587)
[»] scaffold0222 (1 HSPs)
scaffold0222 (183-247)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (183-247)||(116887-116951)
[»] scaffold0310 (1 HSPs)
scaffold0310 (192-258)||(17643-17710)
[»] scaffold0124 (1 HSPs)
scaffold0124 (192-247)||(34276-34331)
[»] scaffold0019 (1 HSPs)
scaffold0019 (192-258)||(135473-135539)
[»] scaffold0461 (1 HSPs)
scaffold0461 (183-247)||(8-72)
[»] scaffold0235 (1 HSPs)
scaffold0235 (194-258)||(22582-22646)
[»] scaffold0146 (1 HSPs)
scaffold0146 (183-247)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (183-247)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (196-258)||(1453-1515)
[»] scaffold0261 (1 HSPs)
scaffold0261 (58-258)||(23559-23760)
[»] scaffold2054 (1 HSPs)
scaffold2054 (159-258)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (164-248)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (128-247)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (191-247)||(12296-12352)
[»] scaffold0790 (1 HSPs)
scaffold0790 (226-261)||(5487-5522)
[»] scaffold0139 (1 HSPs)
scaffold0139 (192-247)||(14997-15052)
[»] scaffold0001 (1 HSPs)
scaffold0001 (176-257)||(493019-493099)
[»] scaffold0096 (1 HSPs)
scaffold0096 (191-251)||(39503-39563)
[»] scaffold0034 (1 HSPs)
scaffold0034 (58-245)||(73149-73337)
[»] scaffold0348 (1 HSPs)
scaffold0348 (193-248)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (193-248)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (193-248)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (193-247)||(1913-1967)
[»] scaffold0453 (1 HSPs)
scaffold0453 (164-248)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (191-247)||(2628-2684)
[»] scaffold0003 (2 HSPs)
scaffold0003 (233-261)||(80293-80321)
scaffold0003 (233-261)||(100015-100043)


Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 18873169 - 18873420
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  18873169 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 18873268  T
Q  101 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 200  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873269 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 18873368  T
Q  201 gaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18873369 gaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 15167984 - 15168230
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  15167984 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 15168083  T
Q  101 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 200  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168084 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 15168183  T
Q  201 gaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15168184 gaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 10896037 - 10895795
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  10896037 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 10895938  T
Q  101 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttc 199  Q
    || |||||||||||||| | |||||| ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  10895937 aagagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttc 10895839  T
Q  200 agaaattatagattatgattatcgagagatagtctcacccttac 243  Q
    | |||||||||||||||||||| |||||||||||||||||||||    
T  10895838 aaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 9 - 251
Target Start/End: Original strand, 14422802 - 14423043
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  14422802 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 14422900  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14422901 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 14422999  T
Q  208 tagattatgattatcgagagatagtctcacccttaccttagttt 251  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  14423000 tagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 12710090 - 12709833
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 99  Q
    ||||||||||||||||||||||||||| ||||||| |||  ||||| |||| |||||||||||||||| |||||||||||  ||||||||||||||||||    
T  12710090 tacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agattaagtttatattctgaacattatatta 12709992  T
Q  100 caac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttt 198  Q
    |||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  12709991 caaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-ttt 12709893  T
Q  199 cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12709892 caggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 12709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 13123161 - 13122904
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 99  Q
    ||||||||||||||||||||||||||| ||||||| |||  ||||| |||| |||||||||||||||| |||||||||||  ||||||||||||||||||    
T  13123161 tacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agattaagtttatattctgaacattatatta 13123063  T
Q  100 caac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttt 198  Q
    |||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  13123062 caaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-ttt 13122964  T
Q  199 cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13122963 caggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13122904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 16009395 - 16009631
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  |||||||| ||||||| |||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  16009395 ttcatcaattcatccaatcaatcataatt-tcaatcagtttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 16009493  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||| | |||||||| |||| |||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  16009494 taacatgatcaatacccattcccct-cagaatcatcatcaaaccttaacccacaatttatcttccaaaaccatgcaattaggtcaattttcagaaattat 16009592  T
Q  209 agattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  16009593 agattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 8 - 258
Target Start/End: Original strand, 13743526 - 13743774
Alignment:
Q  8 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaa 107  Q
    ||||||||||| |||||| |   ||||||| |||| ||||||||||||||||||| |||||||||||||| |||| ||||||||  ||| ||||| | ||    
T  13743526 attcatcaatttatccaaccaagcataatt-tcaaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataatacaagaaaa 13743624  T
Q  108 ttaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaatta 207  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||    
T  13743625 ttaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaatta 13743723  T
Q  208 tagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    || ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13743724 taaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13743774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 12590850 - 12590633
Alignment:
Q  39 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 137  Q
    |||||||||| ||| || ||||||||||||| ||||||| ||||||||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  12590850 tcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcatt--ccatcag 12590753  T
Q  138 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 237  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  12590752 aatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 12590654  T
Q  238 ccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||    
T  12590653 ccttaccttagttttgcagaa 12590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 13007281 - 13007497
Alignment:
Q  39 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 137  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  13007281 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 13007377  T
Q  138 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 237  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  13007378 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 13007476  T
Q  238 ccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||    
T  13007477 ccttaccttagttttgcagaa 13007497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 51 - 245
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  51 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 150  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 16677251  T
Q  151 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 245  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  16677252 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 51 - 245
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  51 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 150  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 17651487  T
Q  151 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 245  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  17651488 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 21231015 - 21230949
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaa 21230949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 20311107 - 20311039
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag--ttttgcagaa 258  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaa 20311039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 247
Target Start/End: Original strand, 13679428 - 13679548
Alignment:
Q  128 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgaga 226  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| || || |    
T  13679428 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 13679527  T
Q  227 gatagtctcacccttacctta 247  Q
    |||||||||||||||||||||    
T  13679528 gatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    |||||| ||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  212 ttatgattatcgagagatagtctcacccttaccttagttttg 253  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  212 ttatgattatcgagagatagtctcacccttaccttagttttg 253  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  212 ttatgattatcgagagatagtctcacccttaccttagttttg 253  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||| ||||||||| ||||| || || ||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 22750950 - 22751201
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  22750950 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 22751049  T
Q  101 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 200  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751050 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 22751149  T
Q  201 gaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22751150 gaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 9 - 259
Target Start/End: Complemental strand, 38144773 - 38144525
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  || ||||| |||||||||||||||||||| |||||  |||||||||||||||||||| ||||||| ||||||| |||||    
T  38144773 ttcatcaattcatccaatcaatcgtaatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaat 38144675  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  38144674 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattat 38144576  T
Q  209 agattatgattatcgagagatagtctcacccttaccttagttttgcagaat 259  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38144575 agattatgattattgagagatagtctcacccttaccttagttttgcagaat 38144525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 28370291 - 28370055
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  ||||||||||||    
T  28370291 ttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 28370193  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28370192 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 28370094  T
Q  209 agattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  28370093 agattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 19512204 - 19512441
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  |||||| |||||    
T  19512204 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaatagaat 19512302  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||| | |||||||| |||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19512303 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 19512401  T
Q  208 tagattatgattatcgagagatagtctcacccttacctta 247  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  19512402 tagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 39 - 252
Target Start/End: Original strand, 23528479 - 23528690
Alignment:
Q  39 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 137  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  23528479 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcatt--ccatcag 23528576  T
Q  138 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 237  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  23528577 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 23528675  T
Q  238 ccttaccttagtttt 252  Q
    |||||||||||||||    
T  23528676 ccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 22438803 - 22438736
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag-ttttgcagaa 258  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaa 22438736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 34830024 - 34830150
Alignment:
Q  133 ttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatag 231  Q
    |||| ||||| ||||| |||||||  |||||||| |||||| | |||||| | ||||| |  |||||||||||||||| ||||  ||||| || |||||     
T  34830024 ttcaaaatcagcatcataccctaattctcaattttatcttcaagaactattctattagattgattttcagaaattatacatta-aattattgaaagataa 34830122  T
Q  232 tctcacccttaccttagttttgcagaat 259  Q
    || ||||||||||||||  |||||||||    
T  34830123 tcccacccttaccttagaattgcagaat 34830150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 42961566 - 42961633
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaat 259  Q
    |||||||||||||| ||| ||||| || || ||  | ||| |||||||||||||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaat 42961633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  195 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  195 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 14763004 - 14762758
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  14763004 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 14762905  T
Q  101 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 200  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762904 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 14762805  T
Q  201 gaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14762804 gaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 38311046 - 38310802
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  38311046 tacacaaattcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 38310947  T
Q  101 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 200  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38310946 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatattca 38310847  T
Q  201 gaaattatagattatgattatcgagagatagtctcacccttacct 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  38310846 gaaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 15 - 245
Target Start/End: Complemental strand, 20248021 - 20247791
Alignment:
Q  15 aattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacat 114  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| | |||||||||    
T  20248021 aattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaaaattaacat 20247922  T
Q  115 gattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatta 214  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247921 gatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatta 20247822  T
Q  215 tgattatcgagagatagtctcacccttacct 245  Q
    ||||||| |||||||||||||||||||||||    
T  20247821 tgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 8 - 245
Target Start/End: Original strand, 24192771 - 24193009
Alignment:
Q  8 attcatcaattcatccaatcgctcataattctcaatcaatttatgat-cacagcaacaacatagattaagttttcattctgaacattatattacaacaga 106  Q
    ||||||||||| ||||||||  ||||| || ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  24192771 attcatcaatttatccaatcaatcatattt-tcaatcagtttatgattcacagcaacagcatagattaagttttcattctgaacatcacattacaacaga 24192869  T
Q  107 attaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaat 205  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24192870 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaat 24192969  T
Q  206 tatagattatgattatcgagagatagtctcacccttacct 245  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  24192970 tatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 9534146 - 9534382
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||  |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  9534146 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacgacaacagtatagattaagttttcattctaaacattacattacaacagaat 9534244  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||| | |||||||| | || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9534245 taacatgatcaatacccattccact-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 9534343  T
Q  209 agattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  9534344 agattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 23370743 - 23370505
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  23370743 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 23370645  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23370644 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 23370546  T
Q  208 tagattatgattatcgagagatagtctcacccttaccttag 248  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  23370545 tagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 57 - 248
Target Start/End: Complemental strand, 24934016 - 24933828
Alignment:
Q  57 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 156  Q
    |||||||||||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  24934016 cagcaacaacatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaa 24933919  T
Q  157 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
       |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24933918 ttttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 55499337 - 55499104
Alignment:
Q  12 atcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaa 111  Q
    ||||||||||||||||  | ||| || |||||||||||||||||||||||||   |||||||||| |||||||| |||||| | ||||||||| ||||||    
T  55499337 atcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaactgtatagattaagatttcattccgaacatcacattacaacataattaa 55499239  T
Q  112 catgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaatttt-cagaaattata 209  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||| | |||   || ||| ||||||||||||| | ||||||| |    
T  55499238 catgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcagttaggtcaattttcccgaaattaca 55499141  T
Q  210 gattat-gattatcgagagatagtctcacccttacct 245  Q
     |||||  ||||  |||||||||||||||||||||||    
T  55499140 tattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 41455304 - 41455087
Alignment:
Q  39 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 137  Q
    |||||||||| ||| || |||||||| | || ||||||| |||||||||  |||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  41455304 tcaatcaattcatggattacagcaaccatatggattaagatttcattcttgacattaaatttcaagaaaactaacatcatctttactcatt--ccatcag 41455207  T
Q  138 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 237  Q
    |||||||||||| ||||||   |||   ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41455206 aatcatcatcaatccctaattttcatcctattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41455108  T
Q  238 ccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||    
T  41455107 ccttaccttagttttgcagaa 41455087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 79 - 258
Target Start/End: Complemental strand, 16801635 - 16801457
Alignment:
Q  79 ttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaa 177  Q
    |||||||| ||||| | |||||| || | |||||||||| ||||| |  ||| | ||| |||||||||||| |||||||| ||||||| |||||| |||     
T  16801635 ttcattctaaacatcacattacagcatatttaacatgatcattacaccattctcctcaaaatcatcatcaa-ccctaaccttcaattttatcttcaaaag 16801537  T
Q  178 ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||| ||||| |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||    
T  16801536 ctaagcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttgcagaa 16801457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  186 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 10389557 - 10389443
Alignment:
Q  134 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 233  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10389557 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10389458  T
Q  234 tcacccttaccttag 248  Q
     ||||||||||||||    
T  10389457 ccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 10414646 - 10414532
Alignment:
Q  134 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 233  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10414646 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10414547  T
Q  234 tcacccttaccttag 248  Q
     ||||||||||||||    
T  10414546 ccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 10421316 - 10421202
Alignment:
Q  134 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 233  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10421316 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10421217  T
Q  234 tcacccttaccttag 248  Q
     ||||||||||||||    
T  10421216 ccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    |||||||| |||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | ||||||||||| |  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 214; Significance: 1e-117; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 12097 - 11840
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||| ||||||| | |||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  12097 tacacaaattcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagattaagttttcattctgaagattatattac 11998  T
Q  101 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 200  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  11997 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttccaaaactatgcaattaggtcaattttca 11898  T
Q  201 gaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11897 gaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 111504 - 111741
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  111504 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 111602  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  111603 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 111701  T
Q  209 agattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  111702 agattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 23057760 - 23057993
Alignment:
Q  14 caattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaaca 113  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  114 tgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatt 213  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23057860 tgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagatt 23057959  T
Q  214 atgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||||||||||||||||||    
T  23057960 atgattatcgagagatagtctcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 29614393 - 29614136
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||||||||||||  |||||| | |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||  || ||    
T  29614393 tacacaaattcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagattaagttttcattctaaacattcaat-ac 29614295  T
Q  101 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt-ccaaaactatgcaattaggtcaattttc 199  Q
    || |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| ||||||| |||||||||||||    
T  29614294 aagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaattttc 29614195  T
Q  200 agaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29614194 agaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 29614136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 23839016 - 23839253
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||    
T  23839016 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 23839114  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaa-actatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||| | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23839115 taacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaatttatcttccaaacactatgcaattaggtcaattttcagaaatta 23839213  T
Q  208 tagattatgattatcgagagatagtctcacccttacctta 247  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  23839214 tagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 9 - 258
Target Start/End: Complemental strand, 10986418 - 10986170
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  || ||||| |||||||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||    
T  10986418 ttcatcaattcatccaatcaatcgtaatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 10986320  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||| | |||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  10986319 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaatttttagaaatta 10986221  T
Q  208 tagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||| || |||||||||||||||||||||||  ||||||||    
T  10986220 tagattatgattattgaaagatagtctcacccttaccttagaattgcagaa 10986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 12 - 247
Target Start/End: Original strand, 4477678 - 4477912
Alignment:
Q  12 atcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaa 111  Q
    ||||| ||||||||||  |||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||||     
T  4477678 atcaaatcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattag 4477776  T
Q  112 catgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatag 210  Q
    |||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4477777 catgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatag 4477875  T
Q  211 attatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4477876 attatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 9 - 258
Target Start/End: Original strand, 18800255 - 18800503
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  | ||| || ||||||||||| |||||||| |||||| |||||||||| ||||||| ||||||| | |||||||||||||    
T  18800255 ttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacaacaacaatatagattaagatttcattttgaacatcacattacaacagaat 18800353  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  18800354 taacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaatta 18800452  T
Q  208 tagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  18800453 tagattatgattattgagagatagtctcacccttacattagttttgcagaa 18800503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 113 - 258
Target Start/End: Complemental strand, 930229 - 930085
Alignment:
Q  113 atgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagat 212  Q
    ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||||||    
T  930229 atgatcattacccatt-cccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagat 930131  T
Q  213 tatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  930130 tatgattattgagagatagtctcacccttaccttagttttgcagaa 930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 21565449 - 21565214
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  | ||| || ||||||||||||||||||||||||||  |||||||||| |||||||| |||| | | ||||||||| |||    
T  21565449 ttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataat 21565351  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| | |||   || |||||||||||||||||| |||||||    
T  21565350 taacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaattttccgaaatta 21565253  T
Q  208 tagattat-gattatcgagagatagtctcacccttacct 245  Q
     | |||||  ||||  |||||||||||||||||||||||    
T  21565252 aatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 12168212 - 12168428
Alignment:
Q  39 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 137  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  12168212 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 12168308  T
Q  138 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 237  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  12168309 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 12168407  T
Q  238 ccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||    
T  12168408 ccttaccttagttttgcagaa 12168428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 19287121 - 19287337
Alignment:
Q  39 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 137  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19287121 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19287217  T
Q  138 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 237  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19287218 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19287316  T
Q  238 ccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||    
T  19287317 ccttaccttagttttgcagaa 19287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 19786075 - 19785859
Alignment:
Q  39 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 137  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19786075 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19785979  T
Q  138 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 237  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19785978 aatcatcatcaaaccctaactttcattttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19785880  T
Q  238 ccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||    
T  19785879 ccttaccttagttttgcagaa 19785859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 19878305 - 19878521
Alignment:
Q  39 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 137  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19878305 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19878401  T
Q  138 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 237  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19878402 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19878500  T
Q  238 ccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||    
T  19878501 ccttaccttagttttgcagaa 19878521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 19884081 - 19884297
Alignment:
Q  39 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 137  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19884081 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19884177  T
Q  138 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 237  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19884178 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19884276  T
Q  238 ccttaccttagttttgcagaa 258  Q
    ||| |||||||||||||||||    
T  19884277 cctaaccttagttttgcagaa 19884297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 59 - 248
Target Start/End: Complemental strand, 34640173 - 34639986
Alignment:
Q  59 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 158  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||| ||||||||||||||||      
T  34640173 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34640076  T
Q  159 ctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
     ||   |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34640075 ttcttattattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 59 - 248
Target Start/End: Complemental strand, 34646847 - 34646660
Alignment:
Q  59 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 158  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||| ||||||||||||||||      
T  34646847 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34646750  T
Q  159 ctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
     ||   |||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34646749 ttcttattattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 25469816 - 25469704
Alignment:
Q  134 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 233  Q
    ||||||| |||||||||||||||   |||  |||| ||||||||| || ||||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  25469816 tcagaattatcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtc 25469719  T
Q  234 tcacccttaccttag 248  Q
    |||||||||||||||    
T  25469718 tcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 24512899 - 24512833
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||| ||||||| |||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaa 24512833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 247
Target Start/End: Original strand, 9187352 - 9187550
Alignment:
Q  51 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 150  Q
    |||||||| |||||  ||||||||||   |||||||||||| || ||||||||| | | ||||||||| ||||    |||| |||| ||||| ||||||     
T  9187352 tgatcacaacaacattatagattaagaaatcattctgaacactaaattacaacacattaaacatgattcttacatcattcctttcaaaatcagcatcaa- 9187450  T
Q  151 ccctaaccctcaattt--atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||  | ||||||  || ||| | ||| || ||||||| || ||||| ||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  9187451 ccctaattcccaatttttatattcaagaacaattcaattagatctatttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 164 - 248
Target Start/End: Original strand, 31252394 - 31252478
Alignment:
Q  164 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || ||  | ||||| |||||||||||||||||    
T  31252394 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 245  Q
    |||||||||||||| |||| |||||||| || ||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 988 - 1240
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  988 tacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-agattaagttttcattctgaacattatattac 1086  T
Q  101 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 200  Q
    || |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  1087 aagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttca 1185  T
Q  201 gaaattatagattatgattatcgagagatagtctcacccttaccttagttttgca 255  Q
    | ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1186 ggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 49989 - 50241
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49989 tacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-agattaagttttcattctgaacattatattac 50087  T
Q  101 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 200  Q
    || |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  50088 aagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttca 50186  T
Q  201 gaaattatagattatgattatcgagagatagtctcacccttaccttagttttgca 255  Q
    | ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50187 ggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 50241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 8046078 - 8045822
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  8046078 tacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggattaagttttcattctgaacattatattac 8045979  T
Q  101 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 200  Q
    || ||||||||||| ||  |||||||||||||||||||||  || ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  8045978 aagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttca 8045880  T
Q  201 gaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8045879 gaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 8045822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 11847916 - 11848179
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  11847916 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 11848015  T
Q  101 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa------tttatcttccaaaactatgcaattaggtcaa 194  Q
    || || ||||||||||| |||||||||| | |||||||||| |||||||||||||||||||||      || || || ||||||||||| | ||||||||    
T  11848016 aaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaactatgccactaggtcaa 11848115  T
Q  195 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11848116 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 59 - 248
Target Start/End: Original strand, 53483573 - 53483760
Alignment:
Q  59 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 158  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||      
T  53483573 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaatt 53483670  T
Q  159 ctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
     ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  53483671 ttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 15408139 - 15408205
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| | |||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaa 15408205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 248
Target Start/End: Original strand, 27906130 - 27906321
Alignment:
Q  58 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 157  Q
    |||||||  ||||||||||   |||| | |||||| | ||||||||| | | ||||||||| |||| | ||| | |||| ||||| ||||| |||||||     
T  27906130 agcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaat 27906229  T
Q  158 cctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
     |||||||| |||||| | |||||| | ||||  | ||||||||||||||||| |||||||| || || ||||| || |||||||| |||||    
T  27906230 tctcaattttatcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 245
Target Start/End: Original strand, 14486632 - 14486713
Alignment:
Q  164 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 245  Q
    ||||||||| | ||| || ||||| | | ||||||||||||||||| |||||||| || ||  |||||||||||||||||||    
T  14486632 tttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||| ||| || ||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcaccctta 242  Q
    |||||||||||||||| || | ||| ||||| ||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  212 ttatgattatcgagagatagtctcacccttaccttagttttg 253  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||| ||| || ||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 111728 - 111948
Alignment:
Q  39 tcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcaga 138  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  111728 tcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcaga 111827  T
Q  139 atcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattatcgagagatagtctcac 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  111828 atcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctcac 111927  T
Q  238 ccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||    
T  111928 ccttaccttagttttgcagaa 111948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 183; Significance: 6e-99; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 997 - 740
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||| ||||||| | ||||||| |||||||||||| |||||||| |||||||||||| || ||||||||||||||||    
T  997 tacacaaattcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaaca-agattaagtttttatcctgaacattatattac 899  T
Q  101 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttc 199  Q
    || || |||| |||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  898 aagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttc 799  T
Q  200 agaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  798 agaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 183; Significance: 6e-99; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 19661690 - 19661454
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  19661690 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 19661592  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19661591 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 19661493  T
Q  209 agattatgattatcgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  19661492 agattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 6483536 - 6483772
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  ||||||||||||    
T  6483536 ttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6483634  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6483635 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 6483733  T
Q  209 agattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  6483734 agattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 6487003 - 6487239
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  ||||||||||||    
T  6487003 ttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6487101  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6487102 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 6487200  T
Q  209 agattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  6487201 agattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 51 - 258
Target Start/End: Original strand, 26583687 - 26583892
Alignment:
Q  51 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 150  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||||| |||||| ||||||||||||||||     
T  26583687 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattaccc-tttcccctcagaatcatcatcaag 26583785  T
Q  151 ccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtt 250  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26583786 ccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaattatagattatgattattgagagatagtctcacccttaccttagtt 26583884  T
Q  251 ttgcagaa 258  Q
    ||||||||    
T  26583885 ttgcagaa 26583892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 23089292 - 23089057
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  | ||| || ||||||||||||||||||||||||||  |||||||||| |||||||| |||| | | ||||||||| |||    
T  23089292 ttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataat 23089194  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| | |||   || |||||||||||||||||| |||||||    
T  23089193 taacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaattttccgaaatta 23089096  T
Q  208 tagattat-gattatcgagagatagtctcacccttacct 245  Q
     | |||||  ||||  |||||||||||||||||||||||    
T  23089095 aatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 245
Target Start/End: Original strand, 23878826 - 23879060
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  |  || || |||||||||||||||||||| |||||  |||||||||| ||||||||||||||| | ||||||||| |||    
T  23878826 ttcatcaattcatccaatcaattctattt-tcaatcaatttatgatcacaacaacagtatagattaagatttcattctgaacatcacattacaacataat 23878924  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||| |||||||  ||||| |||||||||||| | |||||||||||||||||| ||| | |||   || |||||||||||||||||  |||||||    
T  23878925 taacatgatcattaccccattcccctcagaatcatcaac-aaccctaaccctcaatttaatcct-caaggttaagcaattaggtcaatttttcgaaatta 23879022  T
Q  208 tagattatgattatcgagagatagtctcacccttacct 245  Q
    || || || ||||  |||||||||||||||||||||||    
T  23879023 tatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 23101700 - 23101463
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    ||||| |||||||||||||  | ||| || |||||||||||||||||||| |||||  |||||||||| |||||||| |||| | | ||||||||| |||    
T  23101700 ttcatgaattcatccaatcaattatattt-tcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacgtcacattacaacataat 23101602  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||| | |||   ||  ||||||||||||||||| |||||||    
T  23101601 taacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaaacaattaggtcaattttccgaaatta 23101504  T
Q  208 tagattat-gattatcgagagatagtctcacccttacctta 247  Q
     | |||||  ||||  |||||||||||||||||||||||||    
T  23101503 catattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 5706137 - 5706023
Alignment:
Q  134 tcagaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagt 232  Q
    |||||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||  ||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattaatgagagatagt 5706039  T
Q  233 ctcacccttaccttag 248  Q
    ||||||||||||||||    
T  5706038 ctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  186 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 258
Target Start/End: Complemental strand, 23168483 - 23168288
Alignment:
Q  67 atagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 166  Q
    ||||||||||   |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    
T  23168483 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23168384  T
Q  167 ----atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
        |||||| |||||||| | ||||| | |||||| ||||||||||| |||||||| |  || ||||| || ||||||||||||||  ||||||||    
T  23168383 ttttatcttc-aaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23168288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 258
Target Start/End: Complemental strand, 23579740 - 23579545
Alignment:
Q  67 atagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 166  Q
    ||||||||||   |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    
T  23579740 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23579641  T
Q  167 ----atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
        |||||| |||||||| | ||||| | |||||| ||||||||||| |||||||| |  || ||||| || ||||||||||||||  ||||||||    
T  23579640 ttttatcttc-aaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23579545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 26885166 - 26885246
Alignment:
Q  176 aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 257  Q
    |||||| | ||||| | ||||||||||||||||| |||| |||||| || ||||| || ||||||||||||||  |||||||    
T  26885166 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 8 - 245
Target Start/End: Complemental strand, 14635 - 14398
Alignment:
Q  8 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaa 107  Q
    ||||||||||| ||||||||  ||||| || ||||||| |||||||||||||||||| |||||||||||||||||||| |||||| | ||||||||||||    
T  14635 attcatcaatttatccaatcaatcatattt-tcaatcagtttatgatcacagcaacagcatagattaagttttcattcggaacatcacattacaacagaa 14537  T
Q  108 ttaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaatt 206  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14536 ttaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatt 14437  T
Q  207 atagattatgattatcgagagatagtctcacccttacct 245  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  14436 atagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 174; Significance: 1e-93; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 8727979 - 8727735
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||    
T  8727979 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattac 8727880  T
Q  101 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttc 199  Q
    ||||||||||||||||| | |||||| | ||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8727879 aacagaattaacatgatcaataccca-tacccctcagaatcatcgtcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttc 8727781  T
Q  200 agaaattatagattatgattatcgagagatagtctcacccttacct 245  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||||    
T  8727780 agaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 44477441 - 44477678
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  ||||||||||||    
T  44477441 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44477539  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44477540 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 44477638  T
Q  209 agattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  44477639 agattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 44492599 - 44492836
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  ||||||||||||    
T  44492599 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44492697  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44492698 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 44492796  T
Q  209 agattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  44492797 agattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 23866423 - 23866680
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatatta 99  Q
    ||||||||||||||||||||||||||| ||||||| |||  ||||| |||| ||||| |||||||||| |||||||||||  ||||||||||||||||||    
T  23866423 tacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaaca-agattaagtttatattctgaacattatatta 23866521  T
Q  100 caac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttt 198  Q
    |||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  23866522 caaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-ttt 23866620  T
Q  199 cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23866621 caggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 23866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 17054440 - 17054656
Alignment:
Q  39 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 137  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  17054440 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 17054536  T
Q  138 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 237  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  17054537 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcac 17054635  T
Q  238 ccttaccttagttttgcagaa 258  Q
    ||||||||| |||||||||||    
T  17054636 ccttaccttggttttgcagaa 17054656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 27941091 - 27940946
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||| | |||||  ||||||||| |||||||||||||||||| |||||||||||||    
T  27941091 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcataacaacagtatagattaaattttcattctgaacattacattacaacagaat 27940993  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaa 156  Q
    ||||||||| | |||||| ||||| |||||||||||||||||||||||    
T  27940992 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaa 27940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 18614217 - 18614327
Alignment:
Q  138 aatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctca 236  Q
    ||||| ||| |||||||||  |||||||| |||||| | ||| || ||||| | ||||||||||||||||||| || |||||||| ||||||||||||||    
T  18614217 aatcagcataaaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctca 18614316  T
Q  237 cccttacctta 247  Q
    |||||||||||    
T  18614317 cccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 14056619 - 14056553
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||| ||| | | ||| ||||| |||||||||||||||||||||||||| |||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaa 14056553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 25111976 - 25112042
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||| ||| | | ||| ||||| |||||||||||||||||||||||||| |||| ||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaa 25112042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||||| | ||||||||||| || ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 27940907 - 27940840
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaat 259  Q
    |||||||||||||| ||| ||||| || || ||  | ||| |||||||||||||||||||||||||||    
T  27940907 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaat 27940840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 172; Significance: 2e-92; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 20437261 - 20437024
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||||||||||| ||||||||| |||    
T  20437261 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacataat 20437163  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20437162 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 20437064  T
Q  208 tagattatgattatcgagagatagtctcacccttacctta 247  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  20437063 tagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 41111884 - 41112100
Alignment:
Q  39 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 137  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||   |  |||| ||||  || ||||    
T  41111884 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacaccgtctttactcatt--ccatcag 41111980  T
Q  138 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 237  Q
    ||||||||||||||||||||  |||  |||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41111981 aatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41112079  T
Q  238 ccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||    
T  41112080 ccttaccttagttttgcagaa 41112100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 245  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 10433 - 10195
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  10433 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 10335  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10334 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 10236  T
Q  208 tagattatgattatcgagagatagtctcacccttaccttag 248  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  10235 tagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 1763 - 1525
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  1763 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 1665  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1664 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 1566  T
Q  208 tagattatgattatcgagagatagtctcacccttaccttag 248  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  1565 tagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 160; Significance: 3e-85; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 2143 - 1887
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||| ||||| ||||| | | |||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||| |||||    
T  2143 tacacaaattcatcaattcatacaatcactcatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattatgaacattaaattac 2044  T
Q  101 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa-ttttc 199  Q
    || ||||||||||| || ||||||||||  || ||| |||||||||||||||||||||||||| |||| |||||||||||| |||||||||||| |||||    
T  2043 aagagaattaacataatcattacccatt--ccatcaaaatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttc 1946  T
Q  200 agaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  1945 agaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 8820 - 8564
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||| ||||| || || | | |||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||| |||||    
T  8820 tacacaaattcatcaattcatacaatcacttatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattttgaacattaaattac 8721  T
Q  101 aacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa-ttttc 199  Q
    || ||||||||||| || ||||||||||  || ||| |||||||||||||||||||||||||| |||| |||||||||||| |||||||||||| |||||    
T  8720 aagagaattaacataatcattacccatt--ccatcataatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttc 8623  T
Q  200 agaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  8622 agaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 9 - 258
Target Start/End: Original strand, 11159 - 11407
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  | ||| || ||||||||||| ||||||||||||||  || ||||||| ||||||| ||||||| | |||||||||||||    
T  11159 ttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacagcaacagtatggattaagatttcattttgaacatcacattacaacagaat 11257  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  11258 taacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaatta 11356  T
Q  208 tagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11357 tagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 8 - 258
Target Start/End: Original strand, 109 - 356
Alignment:
Q  8 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaa 107  Q
    ||||||||||| |||||| |  |||||||| |||| ||||||||||||||| ||| |||||||||||||| |||| ||||||||  ||| ||||| | ||    
T  109 attcatcaatttatccaaccaatcataatt-tcaaccaatttatgatcacatcaataacatagattaagtcttcaatctgaacaccataatacaagaaaa 207  T
Q  108 ttaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaatta 207  Q
    |||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  208 ttaacatgatcattacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaatta 305  T
Q  208 tagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  306 tagattatggttattgagagatagtctcacccttaccttagttttgcagaa 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 8 - 259
Target Start/End: Original strand, 17985 - 18236
Alignment:
Q  8 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaa-caga 106  Q
    ||||||||||| ||||||||  ||  |||| |||||||||| ||||||||||||||||||||| |||||||||||||||| |||| | ||||||| ||||    
T  17985 attcatcaatttatccaatcaatccaaatt-tcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 18083  T
Q  107 attaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaat 205  Q
    ||||||||||  |||||| ||||||| | ||||||||||| ||||| ||||||||||||||| |||| ||| ||| ||||||||||||||||||| ||||    
T  18084 attaacatgaccattacc-atttcccgttagaatcatcattaaaccttaaccctcaatttattttcctaaagctaagcaattaggtcaattttcaaaaat 18182  T
Q  206 tatagattatgattatcgagagatagtctcacccttaccttagttttgcagaat 259  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18183 tatagattatgattattgagagatagtctcacccttaccttagttttgcagaat 18236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 51 - 258
Target Start/End: Original strand, 30715 - 30923
Alignment:
Q  51 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 150  Q
    |||||||| |||||  |||||||| |  ||||||||| |||| |  |||||||| | ||||||||||  |||| |  ||||| ||| |||||||||||||    
T  30715 tgatcacatcaacattatagattaggaattcattctgcacatcactttacaacatatttaacatgatcgttacaccattcccctcaaaatcatcatcaaa 30814  T
Q  151 ccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagt 249  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30815 ccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagt 30914  T
Q  250 tttgcagaa 258  Q
    |||||||||    
T  30915 tttgcagaa 30923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 3531 - 3295
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  | ||| || ||||||||||| ||||||||||||||  |||||||||| ||||||||||||||| | ||||||||| |||    
T  3531 ttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacagcaacagtatagattaagatttcattctgaacatcacattacaacaaaat 3433  T
Q  109 taacatgatt-attacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaatt 206  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| ||||||  ||||   || |||||||||||||||||| ||||||    
T  3432 taacatgattcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatc-cccaaggttaagcaattaggtcaattttccgaaatt 3335  T
Q  207 atagattat-gattatcgagagatagtctcacccttacct 245  Q
    | | |||||  ||||  |||||||||||||||||||||||    
T  3334 acatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 3859 - 3624
Alignment:
Q  9 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 108  Q
    |||||||||||||||||||  | ||| || |||||||||||||||||||| |||||  |||||||||| |||||||| |||||| | ||||||||| |||    
T  3859 ttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacatcacattacaacataat 3761  T
Q  109 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||| |||||||| | ||| |||||||||||||||||||||||||||||| |||||| | |||   || |||||||||||||||||| |||||||    
T  3760 taacatgatcattaccca-tccccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaattttccgaaatta 3663  T
Q  208 tagattat-gattatcgagagatagtctcacccttacct 245  Q
     | |||||  ||||  |||||||||||||||||||||||    
T  3662 catattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 253
Target Start/End: Complemental strand, 1920 - 1727
Alignment:
Q  57 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 156  Q
    |||||||| ||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  1920 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 1823  T
Q  157 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 253  Q
    |  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1822 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 253
Target Start/End: Complemental strand, 5943 - 5750
Alignment:
Q  57 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 156  Q
    |||||||| ||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  5943 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 5846  T
Q  157 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 253  Q
    |  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5845 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 904 - 991
Alignment:
Q  165 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 8049 - 8136
Alignment:
Q  165 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 806 - 901
Alignment:
Q  8 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaaca 104  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  806 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 7951 - 8046
Alignment:
Q  8 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaaca 104  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  7951 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 8046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3471 - 3558
Alignment:
Q  1 tacacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctga 88  Q
    ||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3471 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 45386 - 45268
Alignment:
Q  136 agaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtct 234  Q
    |||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtct 45288  T
Q  235 cacccttaccttagttttgc 254  Q
    |||||||||||||| |||||    
T  45287 cacccttaccttagatttgc 45268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 40587 - 40521
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaa 40521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

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Target: scaffold0004 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

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Target: scaffold0310 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 17643 - 17710
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag-ttttgcagaa 258  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||||||||||| ||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaa 17710  T

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Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

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Target: scaffold0019 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 135473 - 135539
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||| |||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaa 135539  T

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Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

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Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 22646 - 22582
Alignment:
Q  194 attttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||||||| | |||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaa 22582  T

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Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

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Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

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Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 1453 - 1515
Alignment:
Q  196 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||| |||| ||| || ||||| ||||||||||||||||||| ||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaa 1515  T

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Target: scaffold0261 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 258
Target Start/End: Complemental strand, 23760 - 23559
Alignment:
Q  58 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 157  Q
    |||||||  ||||||||||   |||| |||||||| | ||||||||| | | ||||||||| ||||   ||| | |||| ||||| ||||| |||||||     
T  23760 agcaacattatagattaagaaatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaat 23661  T
Q  158 cctcaattta-tcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcag 256  Q
     ||||||||  ||||| | |||||| |  |||| | ||||||||||||||||| |||||||| ||  | ||||| || ||||||||||||||  ||||||    
T  23660 tctcaattttgtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcag 23561  T
Q  257 aa 258  Q
    ||    
T  23560 aa 23559  T

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Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 680 - 780
Alignment:
Q  159 ctcaatttatcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 257  Q
    |||||||||| ||| | |||||| |  |||||| |||||| ||||||||||| |||| ||| || || ||||| || |||||||||||||||||||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcaga 779  T
Q  258 a 258  Q
    |    
T  780 a 780  T

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Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 164 - 248
Target Start/End: Complemental strand, 5941 - 5857
Alignment:
Q  164 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || || || ||||| || ||||||||||||||    
T  5941 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

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Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 247
Target Start/End: Original strand, 1321 - 1441
Alignment:
Q  128 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgaga 226  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| || || |    
T  1321 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 1420  T
Q  227 gatagtctcacccttacctta 247  Q
    |||||||||||||||||||||    
T  1421 gatagtctcacccttacctta 1441  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

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Target: scaffold0790 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 261
Target Start/End: Original strand, 5487 - 5522
Alignment:
Q  226 agatagtctcacccttaccttagttttgcagaataa 261  Q
    ||||||||||||||||||||||||||||||||||||    
T  5487 agatagtctcacccttaccttagttttgcagaataa 5522  T

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Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  192 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 493099 - 493019
Alignment:
Q  176 aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 257  Q
    |||||| | ||||| | ||||||||||||||||| |||| |||||| || ||||| |||||||||||||||||  |||||||    
T  493099 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttt 251  Q
    ||||||||| ||||||||| |||||||| || ||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 245
Target Start/End: Original strand, 73149 - 73337
Alignment:
Q  58 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 157  Q
    |||||||  ||||||||||   |||| | |||||| | ||||||||| | | ||||||||| |||| |  || | |||| ||||| ||||| |||||||     
T  73149 agcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaat 73248  T
Q  158 cctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 245  Q
     |||||||| |||||| | | |||| | ||||| | |||||||| |||||||| |||||||| || || ||||| || |||||||||||    
T  73249 tctcaattttatcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

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Target: scaffold0348 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | ||||||||||| |  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| ||| || ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  193 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 248
Target Start/End: Complemental strand, 10634 - 10550
Alignment:
Q  164 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 248  Q
    ||||||||| | |||||| | ||||| | ||||||||||||||||| |||| ||| || || ||||| || ||| ||||||||||    
T  10634 tttatcttcaagaactattctattagattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttag 10550  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  191 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 247  Q
    ||||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 261
Target Start/End: Complemental strand, 80321 - 80293
Alignment:
Q  233 ctcacccttaccttagttttgcagaataa 261  Q
    |||||||||||||||||||||||||||||    
T  80321 ctcacccttaccttagttttgcagaataa 80293  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 261
Target Start/End: Complemental strand, 100043 - 100015
Alignment:
Q  233 ctcacccttaccttagttttgcagaataa 261  Q
    |||||||||||||||||||||||||||||    
T  100043 ctcacccttaccttagttttgcagaataa 100015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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