View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17266_high_19 (Length: 301)
Name: NF17266_high_19
Description: NF17266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17266_high_19 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 24 - 301
Target Start/End: Original strand, 6315070 - 6315347
Alignment:
| Q |
24 |
tcatcaacaactgcacaacaatgattatgaatggtttaactatggtgttgtggaatatatggaagagaagaagtaagcagctttggaatatgcctggcaa |
123 |
Q |
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| T |
6315070 |
tcatcaacaactgcacaacaatgattatgaatggtttaactatggtgttgtggaatatatggaagagaagaagtaagcagctttggaatatgcctggcaa |
6315169 |
T |
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| Q |
124 |
caatccaacaagctatttagttcccagttgttttgaaatggcaaaagaaaaagcagcagaatacttagaatttggagattaacacgaggcatatagtaga |
223 |
Q |
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| T |
6315170 |
caatccaacaagctatttagttccctgttgttttgaaatggcaaaagaaaaagcagcaaaatacttagaatttggagattaacacgaggcatatagtaga |
6315269 |
T |
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| Q |
224 |
tggaaaaaaccacaacaggggtgcttgtcatatggcaacaggcggattagtagcaacggagacttgttgggcagatgg |
301 |
Q |
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| T |
6315270 |
tggaaaagaccacaacaggggtacttgtcatatggcaacaggtggattagtagcaacggagacttgttgggcagatgg |
6315347 |
T |
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