View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17268_high_2 (Length: 487)

Name: NF17268_high_2
Description: NF17268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17268_high_2
NF17268_high_2
[»] chr1 (52 HSPs)
chr1 (13-467)||(9787742-9788196)
chr1 (26-264)||(22664191-22664429)
chr1 (25-264)||(33190662-33190900)
chr1 (51-256)||(23037913-23038117)
chr1 (24-257)||(17359154-17359386)
chr1 (167-265)||(3591670-3591768)
chr1 (150-250)||(15543966-15544066)
chr1 (52-254)||(24281272-24281472)
chr1 (27-254)||(28008100-28008326)
chr1 (78-255)||(147625-147800)
chr1 (168-264)||(14779550-14779646)
chr1 (150-266)||(17610256-17610372)
chr1 (24-250)||(12208600-12208826)
chr1 (24-159)||(18100888-18101022)
chr1 (171-258)||(24267803-24267890)
chr1 (177-264)||(27117745-27117832)
chr1 (51-258)||(44795360-44795566)
chr1 (167-257)||(21449081-21449171)
chr1 (150-256)||(22620255-22620361)
chr1 (167-264)||(29242504-29242601)
chr1 (169-256)||(12012819-12012906)
chr1 (178-264)||(16787754-16787840)
chr1 (150-264)||(18736240-18736354)
chr1 (167-256)||(13345353-13345442)
chr1 (167-264)||(17837502-17837599)
chr1 (24-232)||(24214561-24214762)
chr1 (193-258)||(24306348-24306413)
chr1 (148-264)||(15813153-15813268)
chr1 (167-254)||(21847629-21847715)
chr1 (199-254)||(32383047-32383102)
chr1 (168-250)||(25405648-25405730)
chr1 (23-176)||(15807894-15808046)
chr1 (194-259)||(21988026-21988091)
chr1 (24-256)||(9401502-9401730)
chr1 (193-253)||(26540892-26540951)
chr1 (167-254)||(51473893-51473978)
chr1 (193-246)||(16179010-16179063)
chr1 (24-96)||(17610130-17610203)
chr1 (150-227)||(21666608-21666685)
chr1 (150-250)||(21334719-21334819)
chr1 (145-255)||(26648966-26649075)
chr1 (24-69)||(25961040-25961085)
chr1 (164-264)||(16359856-16359955)
chr1 (51-97)||(21973107-21973153)
chr1 (207-253)||(33712660-33712705)
chr1 (193-257)||(15813567-15813632)
chr1 (191-264)||(17121521-17121593)
chr1 (193-250)||(18825655-18825711)
chr1 (53-96)||(14781769-14781813)
chr1 (24-76)||(16916820-16916872)
chr1 (27-115)||(17121378-17121465)
chr1 (40-76)||(25403981-25404017)
[»] chr7 (85 HSPs)
chr7 (54-265)||(7318257-7318468)
chr7 (24-264)||(17153028-17153268)
chr7 (24-256)||(10586898-10587130)
chr7 (27-264)||(3734581-3734817)
chr7 (24-266)||(9574390-9574631)
chr7 (50-243)||(8313293-8313488)
chr7 (24-256)||(15869588-15869819)
chr7 (81-260)||(4986544-4986723)
chr7 (81-260)||(4990642-4990821)
chr7 (13-256)||(5108559-5108801)
chr7 (50-225)||(7492163-7492338)
chr7 (27-258)||(16365696-16365927)
chr7 (151-264)||(9500429-9500542)
chr7 (167-264)||(23099969-23100066)
chr7 (177-250)||(8054085-8054158)
chr7 (24-264)||(8978880-8979120)
chr7 (145-265)||(1584529-1584647)
chr7 (25-255)||(6013587-6013816)
chr7 (40-257)||(9731517-9731734)
chr7 (24-264)||(18662426-18662664)
chr7 (25-253)||(4785833-4786064)
chr7 (167-258)||(9864343-9864434)
chr7 (38-255)||(16297722-16297925)
chr7 (40-257)||(2563810-2564027)
chr7 (40-257)||(3329547-3329765)
chr7 (145-254)||(12181603-12181713)
chr7 (20-264)||(1587666-1587908)
chr7 (167-264)||(31492915-31493012)
chr7 (150-250)||(8054489-8054589)
chr7 (150-250)||(18368980-18369080)
chr7 (51-264)||(19153283-19153493)
chr7 (51-264)||(20752682-20752892)
chr7 (178-257)||(2350775-2350854)
chr7 (182-264)||(5797496-5797578)
chr7 (166-264)||(14755146-14755244)
chr7 (109-253)||(4818833-4818976)
chr7 (177-253)||(10937598-10937674)
chr7 (177-256)||(10584513-10584592)
chr7 (167-266)||(11221181-11221280)
chr7 (167-264)||(5530006-5530103)
chr7 (195-264)||(16306679-16306748)
chr7 (178-266)||(7397179-7397266)
chr7 (193-253)||(9916562-9916622)
chr7 (193-253)||(9924474-9924534)
chr7 (193-264)||(12329667-12329738)
chr7 (168-247)||(13759878-13759957)
chr7 (191-253)||(18466001-18466063)
chr7 (167-256)||(1882362-1882451)
chr7 (24-120)||(9131038-9131135)
chr7 (167-256)||(9261197-9261286)
chr7 (167-264)||(18495358-18495455)
chr7 (195-244)||(21227184-21227233)
chr7 (171-256)||(21230305-21230390)
chr7 (211-255)||(1814109-1814153)
chr7 (197-253)||(5047434-5047489)
chr7 (40-116)||(7397274-7397350)
chr7 (174-226)||(39273199-39273251)
chr7 (177-256)||(1872778-1872857)
chr7 (167-258)||(4579089-4579179)
chr7 (150-257)||(17077120-17077227)
chr7 (167-226)||(18467474-18467533)
chr7 (167-256)||(9245174-9245263)
chr7 (149-258)||(10648569-10648678)
chr7 (167-264)||(14195990-14196086)
chr7 (177-265)||(18449225-18449314)
chr7 (150-226)||(11803103-11803179)
chr7 (177-253)||(12391181-12391257)
chr7 (198-258)||(17151799-17151858)
chr7 (193-249)||(18661590-18661646)
chr7 (193-253)||(26134791-26134850)
chr7 (41-116)||(6006072-6006145)
chr7 (168-250)||(13418533-13418615)
chr7 (195-258)||(21912525-21912588)
chr7 (167-265)||(22339328-22339429)
chr7 (193-250)||(1848270-1848325)
chr7 (175-257)||(6042453-6042534)
chr7 (195-253)||(23093306-23093363)
chr7 (25-114)||(140251-140339)
chr7 (13-122)||(1848091-1848202)
chr7 (174-227)||(13277525-13277578)
chr7 (24-97)||(18368853-18368926)
chr7 (50-86)||(4819002-4819038)
chr7 (24-76)||(6042623-6042675)
chr7 (214-258)||(9130897-9130941)
chr7 (209-249)||(9720964-9721004)
[»] chr2 (40 HSPs)
chr2 (24-264)||(32085448-32085687)
chr2 (25-255)||(20174512-20174740)
chr2 (24-257)||(25618549-25618780)
chr2 (50-257)||(15339230-15339437)
chr2 (24-257)||(29719106-29719338)
chr2 (51-265)||(13776323-13776536)
chr2 (150-264)||(17743476-17743590)
chr2 (144-266)||(19200129-19200250)
chr2 (150-255)||(12953294-12953399)
chr2 (54-160)||(29027585-29027690)
chr2 (177-257)||(25888247-25888327)
chr2 (54-208)||(28606082-28606236)
chr2 (193-250)||(27909162-27909219)
chr2 (175-257)||(26603375-26603457)
chr2 (150-264)||(45621881-45621995)
chr2 (51-123)||(25887805-25887878)
chr2 (167-264)||(30900861-30900958)
chr2 (191-255)||(28770484-28770548)
chr2 (168-255)||(17349352-17349437)
chr2 (196-255)||(45553124-45553183)
chr2 (179-253)||(8447079-8447152)
chr2 (13-110)||(26603223-26603320)
chr2 (193-253)||(8503113-8503173)
chr2 (174-254)||(31804924-31805004)
chr2 (150-265)||(17635775-17635890)
chr2 (167-258)||(23011780-23011870)
chr2 (193-265)||(12557752-12557824)
chr2 (150-227)||(24090926-24091003)
chr2 (193-250)||(25196010-25196066)
chr2 (195-248)||(30411679-30411732)
chr2 (51-248)||(11382654-11382851)
chr2 (167-254)||(25885477-25885563)
chr2 (191-246)||(25939161-25939215)
chr2 (40-110)||(30411805-30411876)
chr2 (167-265)||(5777201-5777298)
chr2 (24-97)||(17349499-17349573)
chr2 (193-227)||(25530469-25530503)
chr2 (193-227)||(25535296-25535330)
chr2 (167-264)||(28925507-28925603)
chr2 (24-120)||(23933420-23933515)
[»] chr4 (56 HSPs)
chr4 (50-257)||(17671994-17672200)
chr4 (24-264)||(14648880-14649119)
chr4 (59-256)||(12578176-12578372)
chr4 (54-252)||(19929579-19929777)
chr4 (24-264)||(19092280-19092519)
chr4 (54-264)||(17951201-17951410)
chr4 (54-264)||(17955053-17955262)
chr4 (26-254)||(5679200-5679427)
chr4 (24-264)||(22357406-22357649)
chr4 (24-257)||(19562049-19562285)
chr4 (101-252)||(22175914-22176064)
chr4 (150-264)||(13128874-13128988)
chr4 (150-264)||(13692669-13692783)
chr4 (150-264)||(21323875-21323989)
chr4 (50-256)||(17337035-17337240)
chr4 (167-264)||(19882625-19882722)
chr4 (24-264)||(7582282-7582522)
chr4 (50-250)||(17216816-17217018)
chr4 (92-263)||(11490518-11490688)
chr4 (24-249)||(13908854-13909079)
chr4 (167-264)||(9737521-9737623)
chr4 (165-256)||(15047121-15047212)
chr4 (165-256)||(15107212-15107303)
chr4 (194-264)||(9052659-9052728)
chr4 (150-248)||(19492700-19492798)
chr4 (201-258)||(12318424-12318481)
chr4 (151-247)||(11521192-11521288)
chr4 (169-232)||(17275833-17275896)
chr4 (177-244)||(22526369-22526436)
chr4 (191-249)||(17709757-17709815)
chr4 (167-256)||(11700587-11700675)
chr4 (138-254)||(11933414-11933529)
chr4 (193-257)||(20829782-20829845)
chr4 (167-258)||(20314991-20315082)
chr4 (167-257)||(13992893-13992983)
chr4 (167-264)||(25121243-25121339)
chr4 (167-247)||(24639471-24639550)
chr4 (148-248)||(26115902-26116001)
chr4 (173-243)||(43941810-43941880)
chr4 (167-247)||(19374830-19374909)
chr4 (109-247)||(19636546-19636682)
chr4 (25-96)||(24639336-24639408)
chr4 (144-256)||(40227770-40227880)
chr4 (214-253)||(15050146-15050185)
chr4 (214-253)||(15104239-15104278)
chr4 (24-110)||(17026218-17026305)
chr4 (183-265)||(3774809-3774890)
chr4 (150-264)||(16730399-16730513)
chr4 (179-253)||(19900576-19900649)
chr4 (167-248)||(15164768-15164849)
chr4 (24-73)||(19492586-19492635)
chr4 (24-97)||(25121101-25121173)
chr4 (150-254)||(8969722-8969825)
chr4 (193-261)||(12839823-12839891)
chr4 (209-249)||(13587231-13587271)
chr4 (40-122)||(15164891-15164974)
[»] scaffold0005 (1 HSPs)
scaffold0005 (24-264)||(168173-168412)
[»] chr8 (42 HSPs)
chr8 (24-264)||(25182302-25182542)
chr8 (50-258)||(14528140-14528347)
chr8 (54-264)||(19786716-19786926)
chr8 (24-264)||(34497100-34497340)
chr8 (24-265)||(13697846-13698078)
chr8 (50-247)||(18448442-18448639)
chr8 (151-258)||(17976610-17976717)
chr8 (151-252)||(24904630-24904731)
chr8 (148-232)||(2637615-2637699)
chr8 (177-264)||(5850926-5851013)
chr8 (167-256)||(29382378-29382467)
chr8 (51-258)||(6884949-6885155)
chr8 (101-264)||(30806443-30806611)
chr8 (167-264)||(15238784-15238881)
chr8 (150-255)||(24269592-24269696)
chr8 (165-257)||(24114297-24114389)
chr8 (167-265)||(17101910-17102008)
chr8 (195-253)||(26008019-26008077)
chr8 (149-257)||(13314991-13315098)
chr8 (193-257)||(24110698-24110762)
chr8 (151-258)||(30122156-30122262)
chr8 (181-244)||(30783772-30783835)
chr8 (145-264)||(28276753-28276871)
chr8 (167-265)||(5052939-5053036)
chr8 (177-253)||(14075590-14075666)
chr8 (195-250)||(17969413-17969468)
chr8 (177-248)||(26615269-26615339)
chr8 (210-265)||(30235361-30235416)
chr8 (191-265)||(31288341-31288415)
chr8 (41-116)||(44010915-44010990)
chr8 (24-97)||(24269748-24269821)
chr8 (174-243)||(44011048-44011116)
chr8 (196-248)||(25226137-25226189)
chr8 (175-254)||(14628371-14628450)
chr8 (193-264)||(24644823-24644893)
chr8 (179-253)||(12268193-12268266)
chr8 (183-253)||(14006091-14006161)
chr8 (168-226)||(27659468-27659526)
chr8 (150-227)||(17509268-17509345)
chr8 (193-250)||(24723484-24723540)
chr8 (50-110)||(29382261-29382322)
chr8 (194-250)||(17972171-17972225)
[»] scaffold0024 (1 HSPs)
scaffold0024 (24-257)||(39576-39809)
[»] chr6 (44 HSPs)
chr6 (24-264)||(28933535-28933774)
chr6 (24-265)||(21907416-21907659)
chr6 (4-257)||(12183185-12183438)
chr6 (24-264)||(11176935-11177175)
chr6 (28-265)||(19244569-19244794)
chr6 (24-258)||(8241268-8241497)
chr6 (33-257)||(15466362-15466584)
chr6 (50-264)||(22567825-22568037)
chr6 (51-256)||(4339728-4339932)
chr6 (167-264)||(9726007-9726104)
chr6 (13-213)||(6630554-6630755)
chr6 (169-257)||(17729144-17729232)
chr6 (50-225)||(9838380-9838554)
chr6 (40-257)||(21672325-21672542)
chr6 (150-257)||(23143714-23143821)
chr6 (150-248)||(9516786-9516884)
chr6 (50-244)||(23645668-23645861)
chr6 (26-259)||(27737565-27737798)
chr6 (40-257)||(21679741-21679958)
chr6 (167-265)||(25927320-25927418)
chr6 (107-258)||(21688752-21688903)
chr6 (197-254)||(14079491-14079548)
chr6 (171-244)||(22566183-22566256)
chr6 (150-247)||(23844465-23844562)
chr6 (150-250)||(17827092-17827192)
chr6 (198-258)||(21932100-21932160)
chr6 (176-247)||(27124518-27124589)
chr6 (200-254)||(5624635-5624689)
chr6 (167-257)||(18075405-18075495)
chr6 (174-248)||(20005903-20005977)
chr6 (195-264)||(7543005-7543074)
chr6 (196-256)||(20145106-20145166)
chr6 (196-256)||(22187673-22187733)
chr6 (177-253)||(26215414-26215488)
chr6 (210-265)||(20002442-20002497)
chr6 (196-258)||(8039178-8039239)
chr6 (150-232)||(23231983-23232065)
chr6 (167-244)||(17299848-17299925)
chr6 (197-253)||(28589477-28589533)
chr6 (24-70)||(24657343-24657389)
chr6 (201-254)||(2586716-2586769)
chr6 (28-73)||(17826974-17827019)
chr6 (16-96)||(27124361-27124441)
chr6 (177-253)||(28586057-28586133)
[»] chr3 (51 HSPs)
chr3 (41-264)||(21325325-21325548)
chr3 (25-264)||(12805766-12806004)
chr3 (24-257)||(21303229-21303461)
chr3 (13-257)||(16245593-16245836)
chr3 (13-255)||(2167481-2167721)
chr3 (51-254)||(3116321-3116522)
chr3 (150-257)||(21301910-21302017)
chr3 (150-248)||(22349410-22349508)
chr3 (51-264)||(5508321-5508532)
chr3 (148-264)||(10744887-10745003)
chr3 (101-264)||(8319025-8319187)
chr3 (168-255)||(10917912-10917999)
chr3 (175-264)||(12411136-12411225)
chr3 (177-253)||(28728940-28729016)
chr3 (24-257)||(41508359-41508591)
chr3 (151-264)||(6289888-6290001)
chr3 (193-246)||(10923150-10923203)
chr3 (24-160)||(17155881-17156015)
chr3 (167-255)||(821531-821619)
chr3 (193-256)||(18458467-18458530)
chr3 (193-264)||(31286058-31286128)
chr3 (148-254)||(18736670-18736775)
chr3 (177-253)||(12759383-12759459)
chr3 (193-264)||(11533018-11533089)
chr3 (179-265)||(25756658-25756745)
chr3 (170-256)||(13908246-13908331)
chr3 (195-264)||(20429695-20429764)
chr3 (26-160)||(2723712-2723845)
chr3 (193-264)||(11518004-11518075)
chr3 (24-115)||(21825744-21825834)
chr3 (168-255)||(21825887-21825973)
chr3 (167-225)||(8557146-8557204)
chr3 (150-264)||(932726-932841)
chr3 (193-250)||(4650231-4650287)
chr3 (150-247)||(17438431-17438527)
chr3 (193-249)||(19908307-19908363)
chr3 (24-76)||(19909847-19909899)
chr3 (193-249)||(21074581-21074636)
chr3 (177-264)||(7147973-7148059)
chr3 (193-264)||(8143600-8143670)
chr3 (150-257)||(19171834-19171941)
chr3 (24-70)||(8267109-8267155)
chr3 (24-70)||(20023427-20023473)
chr3 (167-265)||(8770002-8770101)
chr3 (24-96)||(12754797-12754870)
chr3 (24-76)||(8170044-8170096)
chr3 (27-110)||(16229831-16229915)
chr3 (193-253)||(21019639-21019698)
chr3 (222-258)||(22245341-22245377)
chr3 (40-76)||(27413787-27413823)
chr3 (183-247)||(27542948-27543011)
[»] scaffold0062 (1 HSPs)
scaffold0062 (24-227)||(43101-43304)
[»] chr5 (42 HSPs)
chr5 (24-264)||(18208125-18208362)
chr5 (51-264)||(18937733-18937945)
chr5 (78-265)||(22755505-22755693)
chr5 (167-258)||(15469927-15470018)
chr5 (24-265)||(34487623-34487858)
chr5 (171-258)||(17171574-17171661)
chr5 (41-266)||(19283748-19283971)
chr5 (178-264)||(19086207-19086293)
chr5 (26-264)||(24266835-24267068)
chr5 (26-264)||(24343466-24343699)
chr5 (150-255)||(25550504-25550609)
chr5 (193-264)||(26121367-26121437)
chr5 (27-258)||(36175125-36175354)
chr5 (167-256)||(24852189-24852278)
chr5 (50-256)||(15690771-15690975)
chr5 (164-248)||(17431884-17431968)
chr5 (150-250)||(19004226-19004326)
chr5 (174-264)||(15375906-15375997)
chr5 (195-253)||(17185459-17185517)
chr5 (150-224)||(24245544-24245618)
chr5 (211-264)||(20744872-20744925)
chr5 (16-187)||(24662043-24662213)
chr5 (167-250)||(20315447-20315529)
chr5 (167-266)||(24167601-24167700)
chr5 (52-254)||(25402239-25402441)
chr5 (208-254)||(20419951-20419997)
chr5 (150-227)||(23388838-23388915)
chr5 (193-250)||(24140442-24140498)
chr5 (212-257)||(24662212-24662257)
chr5 (24-97)||(26121198-26121271)
chr5 (177-253)||(23380284-23380360)
chr5 (174-250)||(34128636-34128711)
chr5 (194-257)||(19051541-19051604)
chr5 (28-123)||(24265354-24265448)
chr5 (28-123)||(24341985-24342079)
chr5 (217-264)||(26110528-26110575)
chr5 (191-253)||(15544047-15544108)
chr5 (150-232)||(17315100-17315182)
chr5 (150-264)||(26120850-26120963)
chr5 (13-113)||(15375758-15375859)
chr5 (191-227)||(28664796-28664832)
chr5 (201-253)||(32417407-32417458)
[»] scaffold0622 (1 HSPs)
scaffold0622 (24-255)||(722-952)
[»] scaffold0008 (2 HSPs)
scaffold0008 (13-264)||(54845-55097)
scaffold0008 (195-266)||(48235-48306)
[»] scaffold0155 (1 HSPs)
scaffold0155 (13-254)||(35857-36099)
[»] scaffold0102 (1 HSPs)
scaffold0102 (41-255)||(35531-35745)
[»] scaffold0002 (1 HSPs)
scaffold0002 (27-160)||(114574-114710)
[»] scaffold0136 (1 HSPs)
scaffold0136 (179-264)||(15494-15579)
[»] scaffold0672 (1 HSPs)
scaffold0672 (167-264)||(1719-1816)
[»] scaffold0035 (1 HSPs)
scaffold0035 (150-251)||(69911-70012)
[»] scaffold0019 (1 HSPs)
scaffold0019 (144-265)||(181700-181820)
[»] scaffold0043 (1 HSPs)
scaffold0043 (148-264)||(89852-89967)
[»] scaffold0650 (1 HSPs)
scaffold0650 (151-254)||(6282-6385)
[»] scaffold0638 (1 HSPs)
scaffold0638 (41-227)||(713-900)
[»] scaffold0001 (2 HSPs)
scaffold0001 (193-257)||(69074-69137)
scaffold0001 (174-256)||(81480-81561)
[»] scaffold0263 (1 HSPs)
scaffold0263 (24-94)||(15801-15871)
[»] scaffold0090 (1 HSPs)
scaffold0090 (167-261)||(7429-7523)
[»] scaffold0006 (2 HSPs)
scaffold0006 (198-256)||(18793-18851)
scaffold0006 (198-255)||(223078-223135)
[»] scaffold0838 (1 HSPs)
scaffold0838 (69-248)||(2371-2548)
[»] scaffold0832 (1 HSPs)
scaffold0832 (69-248)||(2402-2579)
[»] scaffold0042 (1 HSPs)
scaffold0042 (180-247)||(29909-29975)
[»] scaffold0653 (1 HSPs)
scaffold0653 (167-256)||(4500-4589)
[»] scaffold0048 (1 HSPs)
scaffold0048 (177-254)||(78589-78666)
[»] scaffold0016 (2 HSPs)
scaffold0016 (150-227)||(3553-3630)
scaffold0016 (177-253)||(12105-12181)
[»] scaffold0957 (1 HSPs)
scaffold0957 (193-257)||(3145-3208)
[»] scaffold0351 (2 HSPs)
scaffold0351 (27-139)||(151-263)
scaffold0351 (54-148)||(5668-5759)
[»] scaffold0063 (1 HSPs)
scaffold0063 (210-258)||(51114-51162)
[»] scaffold0427 (2 HSPs)
scaffold0427 (229-264)||(2886-2921)
scaffold0427 (101-206)||(2768-2874)
[»] scaffold0238 (1 HSPs)
scaffold0238 (167-257)||(19103-19192)
[»] scaffold0056 (1 HSPs)
scaffold0056 (193-266)||(21258-21332)
[»] scaffold0054 (1 HSPs)
scaffold0054 (196-256)||(72065-72125)


Alignment Details
Target: chr1 (Bit Score: 443; Significance: 0; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 13 - 467
Target Start/End: Original strand, 9787742 - 9788196
Alignment:
Q  13 aatatatatatggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  9787742 aatatatatatggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgttgcaaacagttcaaaattgcaatc 9787841  T
Q  113 tctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaatta 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  9787842 tctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctactta 9787941  T
Q  213 tcactttattacttgctaaatgatttggtacacttgcctaatccgatcatcactgcactatgagacctcatacattgtgttgctatccactcatccagta 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9787942 tcactttattacttgctaaatgatttggtacacttgcctaatccgatcatcactgcactatgagacctcatacattgtgttgctatccactcatccagta 9788041  T
Q  313 agtgggttgcatgcttaattgcatgcgtgcttgtttcgttcttctattgccaaagtttcatgttcgtgcgtttccataagctccacaaaaagctcacttt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9788042 agtgggttgcatgcttaattgcatgcgtgcttgtttcgttcttctattgccaaagtttcatgttcgtgcgtttccataagctccacaaaaagctcacttt 9788141  T
Q  413 gagctgaaggaagctgatgcaaaagattaaagatcaaggcatcaatgctataatt 467  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9788142 gagctgaaggaagctgatgcaaaagattaaagatcaaggcatcaatgctataatt 9788196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 26 - 264
Target Start/End: Complemental strand, 22664429 - 22664191
Alignment:
Q  26 ggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatct-ctaaccctttt 124  Q
    ||||||||||||| |||||||| |||||||||||||||||| |||||| || |||||||||| | ||||||  | |||| |||||| | ||||||||| |    
T  22664429 ggattcaaagagtcctaaccgctacttacttttctgcaacc-aaaacatgtaacttgctctgttacaaacaaataaaaattgcaatttactaacccttat 22664331  T
Q  125 ctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattac 224  Q
    ||||| ||||||||||| | ||||||||||||| ||   ||||||||||||||||| || |||     |||||| ||||||||| |||||||||||||||    
T  22664330 ctcttttattttatatcgtcaacttaaaataagcaacgcgagttgtttagacgaaatgaaaatcccagtggataagatactctacttatcactttattac 22664231  T
Q  225 ttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||| |||| ||||||||||| ||||||||| ||| |||||    
T  22664230 ttggtaaacgatttggtacatttgcctaattcgagcatca 22664191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 25 - 264
Target Start/End: Complemental strand, 33190900 - 33190662
Alignment:
Q  25 gggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaaccctttt 124  Q
    ||||| |||||| | ||||||||  ||||||||||||||| ||||  ||||| |||||| ||| ||||||||  | |||| | |||||||||| ||||      
T  33190900 gggatccaaagaatcctaaccgctgcttacttttctgcaatcaaac-caggtaacttgcactgttgcaaacaaataaaaattacaatctctaaaccttaa 33190802  T
Q  125 ctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattac 224  Q
    || || ||||||||||| | ||||||||||||||||   |||||||||||| ||||||||||||  | ||||||  |||||||| |||||| ||||||||    
T  33190801 ctattttattttatatcgtcaacttaaaataagtaacacgagttgtttagatgaaacgacaattgttgtggatattatactctacttatcattttattac 33190702  T
Q  225 ttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||| |||| |||||||||||| || ||||||||| |||||    
T  33190701 ttgataaacgatttggtacacctgtctaatccgaccatca 33190662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 51 - 256
Target Start/End: Original strand, 23037913 - 23038117
Alignment:
Q  51 ttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctct-aacccttttctcttctattttatatcat-aaact 148  Q
    |||| |||||||||||||||||| || ||||||| || |||||||||   |||| || ||| ||| |||| || |||||| ||||||||  ||| |||||    
T  23037913 ttacatttctgcaaccaaaaacaagtaacttgctatgttgcaaacagaaaaaaattgtaatttctcaaccattatctcttttattttat--catcaaact 23038010  T
Q  149 taaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    ||||||||||||   ||||||||| ||||||||||||||  || |||||||||||||| | |||||||||||||||||| |||| |||||||||||||||    
T  23038011 taaaataagtaacgagagttgttttgacgaaacgacaatccatgtggatacgatactc-acttatcactttattacttggtaaacgatttggtacacttg 23038109  T
Q  249 cctaatcc 256  Q
    ||||||||    
T  23038110 cctaatcc 23038117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 24 - 257
Target Start/End: Complemental strand, 17359386 - 17359154
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcactt-gctctgatgcaaacagttcaaaactgcaa-tctctaaccct 121  Q
    |||||||| |||| | ||||||||| ||||||||| ||||||||||||||||| | || ||| || ||| | ||| | |||| ||||| |||||||||||    
T  17359386 ggggattcgaagaatcctaaccgcatcttacttttatgcaaccaaaaacaggtaaatttgctatgttgccagcagataaaaattgcaactctctaaccct 17359287  T
Q  122 tttctcttctattttatatcataaacttaaaa-taagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcacttta 220  Q
    | ||| || |    |||||| | ||| ||||| |||||||   || || ||| |||||||||||||| | |||||||| ||||||| | |||||||||||    
T  17359286 tatcttttat----tatatcgtcaacctaaaaataagtaacgagaattatttggacgaaacgacaatctttatggatatgatactcaacttatcacttta 17359191  T
Q  221 ttacttgctaaatgatttggtacacttgcctaatccg 257  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  17359190 ttacttggtaaacgatttggtacacttgcctaatccg 17359154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 167 - 265
Target Start/End: Original strand, 3591670 - 3591768
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatcac 265  Q
    |||||| ||| |||||||||| ||| |||||||||||||||| |||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||    
T  3591670 ttgtttggacaaaacgacaatctatgtggatacgatactctatttatcactttattacttgataaacgattttgtacacttgcctaatccgaccatcac 3591768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 15543966 - 15544066
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| ||||||||||||||||   |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  15543966 aaaataagtaacacgaattgtttggacgaaacgacaatttccgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgc 15544065  T
Q  250 c 250  Q
    |    
T  15544066 c 15544066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 52 - 254
Target Start/End: Complemental strand, 24281472 - 24281272
Alignment:
Q  52 tacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaacttaa 151  Q
    ||||||||| ||||||||  || || |||| ||||| | ||||||| |  ||| |||||||||||||||||| ||||| ||||||||||  | |||||||    
T  24281472 tacttttctacaaccaaa--catgtaactttctctgtttcaaacagatagaaattgcaatctctaaccctttactcttttattttatattgtcaacttaa 24281375  T
Q  152 aataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcct 251  Q
    |||||||||    | |||||  ||  |||||| |||  || |||||| |||| |||| |||||||||||||||||| |||| ||||||||||| ||||||    
T  24281374 aataagtaacgcaaattgttcggaaaaaacgataatccatgtggatatgataatctacttatcactttattacttggtaaacgatttggtacatttgcct 24281275  T
Q  252 aat 254  Q
    |||    
T  24281274 aat 24281272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 27 - 254
Target Start/End: Complemental strand, 28008326 - 28008100
Alignment:
Q  27 gattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttct 126  Q
    |||||||||| | ||||||||  ||||||||||||||||||||| || || | |||||||  || |||||| | |||| |||||||||||| ||||| ||    
T  28008326 gattcaaagaatcctaaccgctgcttacttttctgcaaccaaaa-caagtaatttgctctattggaaacagataaaaattgcaatctctaatcctttact 28008228  T
Q  127 cttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattactt 226  Q
    ||| ||||||||||| | ||||||||||||||||   || |||| || |  | |||||||||   ||| |||||||||| |  |||| ||||||||||||    
T  28008227 cttttattttatatcgtcaacttaaaataagtaacacgaattgtataaagaagacgacaattccaatgaatacgatactattcttataactttattactt 28008128  T
Q  227 gctaaatgatttggtacacttgcctaat 254  Q
      |||| |||||| |||| ||| |||||    
T  28008127 agtaaacgatttgatacatttgtctaat 28008100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 78 - 255
Target Start/End: Complemental strand, 147800 - 147625
Alignment:
Q  78 acttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacg 177  Q
    |||||||||| |||||| || | |||| || |||||||||||||| |||||| ||||| ||||| | || |||||||||||||   ||| ||||||||||    
T  147800 acttgctctgttgcaaatagat-aaaattgaaatctctaacccttatctcttttattt-atatcgtcaaattaaaataagtaacgcgagctgtttagacg 147703  T
Q  178 aaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatc 255  Q
    ||| ||||||  || || ||| ||||||| | ||||||||||||||||||  ||| |||||| |||||||| ||||||    
T  147702 aaatgacaatccatgtgaatatgatactccacttatcactttattacttgtgaaacgatttgatacacttgtctaatc 147625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 168 - 264
Target Start/End: Complemental strand, 14779646 - 14779550
Alignment:
Q  168 tgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||||| ||||||||||||||   | |||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||| |||||    
T  14779646 tgtttggacgaaacgacaatccctgtggatatgatactctaattatcacattattacttggtaaatgatttggtacacttgccatatccgaccatca 14779550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 150 - 266
Target Start/End: Original strand, 17610256 - 17610372
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| ||||||||||||||  || |||||||||||||||| |||| ||||||||||||| |||| |||||||||||||||     
T  17610256 aaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatacgatactctacttataactttattacttggtaaacgatttggtacacttgt 17610355  T
Q  250 ctaatccgatcatcact 266  Q
    |  |||||| |||||||    
T  17610356 catatccgaccatcact 17610372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 250
Target Start/End: Complemental strand, 12208826 - 12208600
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtca-cttgctctgatgcaaacagttcaaaactgcaatct--ctaaccc 120  Q
    |||||||| |||| | ||||||||  |||||||||||||| | |||| ||||| | ||||||||| ||||||||| | ||||||| || ||  |||||||    
T  12208826 ggggattcgaagaatcctaaccgctgcttacttttctgcagctaaaa-caggtaaacttgctctgttgcaaacagattaaaactgaaacctttctaaccc 12208728  T
Q  121 ttttctcttctattttatatcataaactta---aaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcact 217  Q
    |||| ||||     ||||||| | ||||||   ||||||||||   || |||||| ||||||||||||||  || |||||| |||| |||| ||||||||    
T  12208727 ttttatctt-----ttatatcgtcaacttacaaaaataagtaacgcgaattgtttggacgaaacgacaatccatgtggatatgatattctacttatcact 12208633  T
Q  218 ttattacttgctaaatgatttggtacacttgcc 250  Q
    |||||||||| |||| ||||| |||||||||||    
T  12208632 ttattacttggtaaacgatttagtacacttgcc 12208600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 18100888 - 18101022
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||||||| | |  |||||||  ||||||||||||||||||||| || || ||||||| || ||||||||| | |||| |||||| ||||||||||     
T  18100888 ggggattcaaataatcataaccgctgcttacttttctgcaaccaaaa-catgtaacttgctatgttgcaaacagataaaaattgcaatttctaaccctta 18100986  T
Q  124 tctcttctattttatatcataaacttaaaataagta 159  Q
     ||||||||||||||||| | || ||||||||||||    
T  18100987 actcttctattttatatcgtcaaattaaaataagta 18101022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 24267803 - 24267890
Alignment:
Q  171 ttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccga 258  Q
    ||||||||||| ||||| |||||||||| |||||| || |||||| ||||||||||| ||||||||||| |||||||| |||||||||    
T  24267803 ttagacgaaacaacaatctatatggatatgatactatacttatcattttattacttgataaatgatttgatacacttgtctaatccga 24267890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 264
Target Start/End: Original strand, 27117745 - 27117832
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||||||||| || || |||| |||||||| |||||||||||||||||| |||| ||||||||| ||||||||||||||| |||||    
T  27117745 gaaacgacaattcatgtgaatacaatactctacttatcactttattacttggtaaacgatttggtaaacttgcctaatccgaccatca 27117832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 258
Target Start/End: Complemental strand, 44795566 - 44795360
Alignment:
Q  51 ttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgc-aatctc-taacccttttctcttctattttatatcataaact 148  Q
    |||| ||||||||||||||||||| | ||| ||| || ||||||||  | |||| ||| |||||| |||||||| ||| || |||||  |||||| |||     
T  44795566 ttacatttctgcaaccaaaaacagataactcgctttgctgcaaacatataaaaattgcaaatctcttaacccttatct-ttttattt--tatcatcaaca 44795470  T
Q  149 taaaataagtaattggag-ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    |||||||||||| | ||| || ||| ||||||||||||||  || |||||||||||||| | ||||| |||||||||||| |||||| || |||||||||    
T  44795469 taaaataagtaagtcgagtttttttggacgaaacgacaatccatgtggatacgatactc-acttatctctttattacttggtaaatgcttcggtacactt 44795371  T
Q  248 gcctaatccga 258  Q
    | |||||||||    
T  44795370 gtctaatccga 44795360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 21449171 - 21449081
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    |||||| | ||||||||||||   | |||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||| |||||    
T  21449171 ttgtttggccgaaacgacaatccttgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctgatccg 21449081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 150 - 256
Target Start/End: Complemental strand, 22620361 - 22620255
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || || ||||||||||| |||||||  |||||||||||||||||| |||||||||||||||||  ||||  ||||| |||||||||    
T  22620361 aaaataagtaacgtgaattatttagacgaaaagacaattcctatggatacgatactctagttatcactttattactttttaaagaatttgatacacttgc 22620262  T
Q  250 ctaatcc 256  Q
    |||||||    
T  22620261 ctaatcc 22620255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 264
Target Start/End: Complemental strand, 29242601 - 29242504
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||| || |||||||||||   |||||||||||||||||| |||||||||||||||||| ||||  ||||||||||||||||  |||||| |||||    
T  29242601 ttgtttggatgaaacgacaatcactatggatacgatactctacttatcactttattacttgataaacaatttggtacacttgccatatccgaccatca 29242504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 12012819 - 12012906
Alignment:
Q  169 gtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    |||||||  ||||||||||| || ||||||| |||||||| ||||||||||| |||||| |||| |||||| ||||||||||||||||    
T  12012819 gtttagataaaacgacaattcatgtggatacaatactctacttatcactttaatacttgataaacgatttgatacacttgcctaatcc 12012906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 16787754 - 16787840
Alignment:
Q  178 aaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||||||| ||| || ||||||||||||| |||||||||||||||||| |||| |||||| | | |||||||||||||| |||||    
T  16787754 aaacgacaatctatgtgaatacgatactctacttatcactttattacttgataaacgatttgattcccttgcctaatccgaccatca 16787840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 150 - 264
Target Start/End: Original strand, 18736240 - 18736354
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||  | | ||||||  |||||||||||||   | |||||||||||| ||| |||||||||||||||||| |||| ||||||||||||||||    
T  18736240 aaaataagtaacggaaattgtttgaacgaaacgacaatccctgtggatacgatacactacttatcactttattacttgttaaacgatttggtacacttgc 18736339  T
Q  250 ctaatccgatcatca 264  Q
    |  |||||| |||||    
T  18736340 catatccgaccatca 18736354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 13345353 - 13345442
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    |||||| ||| ||||||||||  || |||||| ||||||||| |||||||||||||||||| ||||  |||||||||||||||| |||||    
T  13345353 ttgtttggacaaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaacaatttggtacacttgcccaatcc 13345442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 167 - 264
Target Start/End: Complemental strand, 17837599 - 17837502
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||||||| ||| ||||||   | |||||| ||||||||| |||| ||||||||||||| ||||  |||||||||||||||||||||||| |||||    
T  17837599 ttgtttagacaaaatgacaatccttgtggatatgatactctacttataactttattacttggtaaacaatttggtacacttgcctaatccgaccatca 17837502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 232
Target Start/End: Complemental strand, 24214762 - 24214561
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||  ||||| |||||  ||      ||||| | |||| | |||| || |||||||     
T  24214762 ggggattcaaagagtcctaaccgctacttatttttctgcaaccaaac-caggtaacttggcct------aacagataaaaattccaatttcaaaccctta 24214670  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
      |||| ||||||||||| |  |||||||||||||||    ||||||||||||||||| |||||  || |||||||  |||| || ||||||||||||||    
T  24214669 attcttttattttatatcgtccacttaaaataagtaacgtaagttgtttagacgaaacaacaatccatgtggatacagtactgtacttatcactttatta 24214570  T
Q  224 cttgctaaa 232  Q
    |||| ||||    
T  24214569 cttggtaaa 24214561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 24306348 - 24306413
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccga 258  Q
    |||||||||||||||| |||||||||||||||||| |||| || |||||||||||||| |||||||    
T  24306348 tggatacgatactctacttatcactttattacttggtaaacgacttggtacacttgccaaatccga 24306413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 264
Target Start/End: Original strand, 15813153 - 15813268
Alignment:
Q  148 ttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    |||||||||||||   ||||||||| |||| ||||| |||   | ||||||||||| || | ||||||||||||||| || |||| ||||||||||||||    
T  15813153 ttaaaataagtaacgagagttgtttggacgcaacgaaaatccttgtggatacgatagtc-acttatcactttattacatgataaacgatttggtacactt 15813251  T
Q  248 gcctaatccgatcatca 264  Q
    ||||||||||| |||||    
T  15813252 gcctaatccgaccatca 15813268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 21847715 - 21847629
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaat 254  Q
    |||||| ||||||||||||||  || ||||||| |||||||| |||  ||||||||||||| |||| |||||||||||||||||||||    
T  21847715 ttgtttggacgaaacgacaatccatgtggatacaatactctacttag-actttattacttggtaaacgatttggtacacttgcctaat 21847629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 32383047 - 32383102
Alignment:
Q  199 cgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaat 254  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  32383047 cgatactctatttatcactttattacttggtaaacgatttggtacacttgcctaat 32383102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 25405648 - 25405730
Alignment:
Q  168 tgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    ||||| ||||||||||||||   | ||||||||||||| || |||||||||||||||||| |||| || ||||||||||||||    
T  25405648 tgtttggacgaaacgacaatccttgtggatacgatactttacttatcactttattacttggtaaacgacttggtacacttgcc 25405730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 176
Target Start/End: Original strand, 15807894 - 15808046
Alignment:
Q  23 tggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaaccctt 122  Q
    |||||||||||||| | |||| |||  |||| |||||| ||||||||| | ||| |||||||||| ||||||||  | |||| |||||||  ||||| ||    
T  15807894 tggggattcaaagaatcctaatcgctgcttatttttctacaaccaaaa-ctggtaacttgctctgttgcaaacaaataaaaattgcaatccttaaccatt 15807992  T
Q  123 ttctcttctattttatatcataaacttaaaataagtaattggagttgtttagac 176  Q
      ||||| ||||||||||| | ||  |||||||||||||  |||||||||||||    
T  15807993 aactcttttattttatatcttcaaactaaaataagtaatgcgagttgtttagac 15808046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 21988026 - 21988091
Alignment:
Q  194 ggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgat 259  Q
    ||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||  |||||||    
T  21988026 ggatacgatactctacttatcactttattatttggtaaaggatttggtacacttgccatatccgat 21988091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 256
Target Start/End: Complemental strand, 9401730 - 9401502
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtca-cttgctctgatgcaaacagttcaaaactgcaa-tctctaaccct 121  Q
    |||||||| |||| | |||||||| |||||||||| || |||||||| ||||| | ||| ||||| ||||||||| | |||| ||||| ||||||||| |    
T  9401730 ggggattcgaagaatcctaaccgctacttacttttttgtaaccaaaa-caggtaaacttactctgttgcaaacagataaaaattgcaactctctaaccgt 9401632  T
Q  122 tttctcttctattttatatcataaactta---aaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactt 218  Q
    | ||| || |    |||||||  ||||||   ||||||||||   || |||||| ||||||||||||||| || |||||||||||||||| ||   ||||    
T  9401631 tatcttttat----tatatcaacaacttacaaaaataagtaacgcgaattgtttggacgaaacgacaattcatgtggatacgatactctactt---actt 9401539  T
Q  219 tattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    |||||| || ||||  ||||||||||| ||||||||||    
T  9401538 tattacctggtaaactatttggtacac-tgcctaatcc 9401502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 26540951 - 26540892
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||    
T  26540951 tggatacgatactctactta-cactttattacttggtaaacgatttggtacacttgcctaa 26540892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 167 - 254
Target Start/End: Original strand, 51473893 - 51473978
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaat 254  Q
    |||||| ||| ||||||||||  ||||||||||||||||||| |||||||||||||||  | |||| ||||||||||| || ||||||    
T  51473893 ttgtttggacaaaacgacaatccatatggatacgatactctacttatcactttattac--ggtaaacgatttggtacattttcctaat 51473978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 16179063 - 16179010
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacact 246  Q
    |||||||||||||||| |||||| ||||||||||| |||| |||||||||||||    
T  16179063 tggatacgatactctacttatcagtttattacttgttaaacgatttggtacact 16179010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 17610130 - 17610203
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggt-cacttgctctgatgcaaaca 96  Q
    |||| |||||||| | ||||||||  |||||||||||||||||||||||||||  |||||||||| ||||||||    
T  17610130 ggggtttcaaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaaca 17610203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 21666608 - 21666685
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttg 227  Q
    |||||||||||   || |||||| ||||||| ||||||  || |||||||||||||||| ||||||||||||||||||    
T  21666608 aaaataagtaacgagaattgtttggacgaaaggacaatccatgtggatacgatactctacttatcactttattacttg 21666685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 21334719 - 21334819
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| || |||| |||||||  |  |||||||||||| || |||||||||||||||||| ||||||||||| |||| ||||    
T  21334719 aaaataagtaacgagaattgtttggaagaaatgacaattcctccggatacgatactatacttatcactttattacttgataaatgatttgatacatttgc 21334818  T
Q  250 c 250  Q
    |    
T  21334819 c 21334819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 255
Target Start/End: Original strand, 26648966 - 26649075
Alignment:
Q  145 aacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtaca 244  Q
    |||||||||||| |||   ||||||||| |||||||||| |||  || ||||||| ||| || | |||||| ||||||||||| |||| |||||| ||||    
T  26648966 aacttaaaataaataacgcgagttgtttggacgaaacgataatccatgtggatacaatattc-acttatcattttattacttggtaaacgatttgataca 26649064  T
Q  245 cttgcctaatc 255  Q
    |||| ||||||    
T  26649065 cttgtctaatc 26649075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 25961040 - 25961085
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaa 69  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||||    
T  25961040 ggggattcaaagagtcctaaccgcttcttacttttctgcaaccaaa 25961085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 264
Target Start/End: Complemental strand, 16359955 - 16359856
Alignment:
Q  164 gagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatc 263  Q
    |||||| || || ||||||||| |  || ||||||| ||||| || ||| || ||||||||||| |||| |||||||||||||||||||||| || ||||    
T  16359955 gagttgattggatgaaacgacagtacatgtggatacaatactatactta-cattttattacttggtaaacgatttggtacacttgcctaatctgaccatc 16359857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 21973107 - 21973153
Alignment:
Q  51 ttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacag 97  Q
    |||||||||||||||||||||||||| ||||| | || |||||||||    
T  21973107 ttacttttctgcaaccaaaaacaggtaacttgttatgttgcaaacag 21973153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 33712705 - 33712660
Alignment:
Q  207 taattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  33712705 taattatcactttattatttggtaaa-gatttggtacacttgcctaa 33712660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 15813567 - 15813632
Alignment:
Q  193 tggatacgatactctaatt-atcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    ||||||| |||||||| || |||||||||||  ||| |||| ||||||||||||||| ||||||||    
T  15813567 tggatacaatactctactttatcactttattttttgataaacgatttggtacacttgtctaatccg 15813632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 264
Target Start/End: Original strand, 17121521 - 17121593
Alignment:
Q  191 tatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||  ||||| |||||||| |||||| || |||||    
T  17121521 tatggatatgatactctactta-cactttattacttgataaacaatttgatacacttgtctaatctgaccatca 17121593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 18825711 - 18825655
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    ||||||||||||| || |||||||||||||||||| | || || ||||||||||||||    
T  18825711 tggatacgatactttacttatcactttattacttggtcaacga-ttggtacacttgcc 18825655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 14781769 - 14781813
Alignment:
Q  53 acttttctgcaaccaaaaacaggt-cacttgctctgatgcaaaca 96  Q
    ||||||||||||||||||||||||  | |||||||||||||||||    
T  14781769 acttttctgcaaccaaaaacaggtaaatttgctctgatgcaaaca 14781813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 16916820 - 16916872
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggt 76  Q
    |||||||| |||| | ||| ||||  |||||||||||||||||||||||||||    
T  16916820 ggggattcgaagaatcctacccgctgcttacttttctgcaaccaaaaacaggt 16916872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 17121378 - 17121465
Alignment:
Q  27 gattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctct 115  Q
    ||||| |||| | ||||||||  ||||||||||||||||| |||||| || |||||||||  ||||||||  | |||| ||||||||||    
T  17121378 gattcgaagaatcctaaccgctgcttacttttctgcaacc-aaaacaagtaacttgctctattgcaaacaaatgaaaaatgcaatctct 17121465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 25403981 - 25404017
Alignment:
Q  40 ctaaccgcaacttacttttctgcaaccaaaaacaggt 76  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  25403981 ctaaccgctacttacttttctggaaccaaaaacaggt 25404017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 54 - 265
Target Start/End: Complemental strand, 7318468 - 7318257
Alignment:
Q  54 cttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaa 153  Q
    |||||||||||||||||| | || |||||||||| ||||||||| | |||| ||||||||||||||||| |||||| ||||||||||| | |||||||||    
T  7318468 cttttctgcaaccaaaaagaagtaacttgctctgttgcaaacagataaaaattgcaatctctaacccttatctcttttattttatatcgtcaacttaaaa 7318369  T
Q  154 taagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    ||||||||  ||| ||||||||||||||||||||  || |||||||||||||||| |||||||||||||||||| |||| ||| ||||||||||||||||    
T  7318368 taagtaatgcgagctgtttagacgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatatggtacacttgcctaa 7318269  T
Q  254 tccgatcatcac 265  Q
    ||||| ||||||    
T  7318268 tccgaccatcac 7318257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 264
Target Start/End: Original strand, 17153028 - 17153268
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    |||||||||||||||  |||||||  ||||||||||||||||||||||||||| ||||||| || ||||||||| | ||||   |||||||||||||||     
T  17153028 ggggattcaaagagtcataaccgctgcttacttttctgcaaccaaaaacaggtaacttgctttgttgcaaacagataaaaataacaatctctaaccctta 17153127  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
    |||||| |||||||| || | ||||||||||||||||   ||| |||||||||||||||||||| ||| |||||||||||||||| |||||||||| |||    
T  17153128 tctcttttattttatgtcgtcaacttaaaataagtaacgcgagctgtttagacgaaacgacaatctatgtggatacgatactctacttatcactttctta 17153227  T
Q  224 cttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||| ||||  ||||| |||||||  ||||||||| |||||    
T  17153228 cttggtaaactatttgatacacttttctaatccgaccatca 17153268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 256
Target Start/End: Original strand, 10586898 - 10587130
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    |||||||||||||||  ||||| |  ||||||||| |||||||| ||||| ||  ||||||||| ||||||||| | |||| |||||||| ||||||||     
T  10586898 ggggattcaaagagtcttaaccactgcttacttttttgcaaccagaaacatgtatcttgctctgttgcaaacagataaaaattgcaatctttaaccctta 10586997  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
    | |||| ||||||||||  ||||||||||||||||||   ||||||||||||||||||||||||   | | |||||||||||||| ||||||||||||||    
T  10586998 tttcttttattttatattgtaaacttaaaataagtaacatgagttgtttagacgaaacgacaatccctgtagatacgatactctacttatcactttatta 10587097  T
Q  224 cttgctaaatgatttggtacacttgcctaatcc 256  Q
    |||| |||| |||||||||||||||||||||||    
T  10587098 cttggtaaacgatttggtacacttgcctaatcc 10587130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 27 - 264
Target Start/End: Complemental strand, 3734817 - 3734581
Alignment:
Q  27 gattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttct 126  Q
    |||||||||||| ||||||    ||||||||||||||||||||| ||||| |||||||||| ||||||||| | |||  |||||||| ||||||||  ||    
T  3734817 gattcaaagagtcctaaccattgcttacttttctgcaaccaaaa-caggtaacttgctctgttgcaaacagataaaatttgcaatctttaacccttaact 3734719  T
Q  127 cttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattactt 226  Q
    ||| ||||||||||| | ||||||||||||||||   || |||||| ||| |||| |||||| || |||||||||||||||| |||||||||||||||||    
T  3734718 cttttattttatatcgtcaacttaaaataagtaacgtgaattgtttggaccaaacaacaattcatgtggatacgatactctacttatcactttattactt 3734619  T
Q  227 gctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    | ||||  ||||||||||||| ||||||| || |||||    
T  3734618 ggtaaaaaatttggtacacttacctaatctgaccatca 3734581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 24 - 266
Target Start/End: Complemental strand, 9574631 - 9574390
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||||||||| | ||||| ||   |||||||||| ||| ||||  ||||| |||||||||  ||||||||| | |||| | |||| ||||||||||     
T  9574631 ggggattcaaagaatcctaactgctgtttacttttcttcaaacaaac-caggttacttgctctattgcaaacagataaaaattacaatttctaaccctta 9574533  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
     ||||| ||||||||||| | |||||||||||| |||   |||| ||||||||||||| ||||| | | | |||||||||||||| |||||||||||||     
T  9574532 actcttttattttatatcgtcaacttaaaataaataacgcgagtcgtttagacgaaacaacaatctctgtagatacgatactctacttatcactttattc 9574433  T
Q  224 cttgctaaatgatttggtacacttgcctaatccgatcatcact 266  Q
    |||| |||| ||||| |||||||||||||||| || |||||||    
T  9574432 cttggtaaacgatttagtacacttgcctaatctgaccatcact 9574390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 50 - 243
Target Start/End: Original strand, 8313293 - 8313488
Alignment:
Q  50 cttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaactt 149  Q
    |||||||||||||||||||||  |||| |||||||||| || |||||| | |||| |||||||||||||||||  ||||| ||||||||| | | |||||    
T  8313293 cttacttttctgcaaccaaaat-aggtaacttgctctgttgaaaacagataaaaattgcaatctctaacccttaactcttttattttataccttcaactt 8313391  T
Q  150 aaaataagt-----aattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtac 243  Q
    |||||||||     ||||  |||||||||||||||||||||||   | ||||||||||| |||| |||||||||||||||||| |||||||||| ||||    
T  8313392 aaaataagtaacacaatt--agttgtttagacgaaacgacaatccctgtggatacgataatctacttatcactttattacttggtaaatgattttgtac 8313488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 24 - 256
Target Start/End: Complemental strand, 15869819 - 15869588
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||||||||||| |||||||    |||||||| ||||||||||||||||| ||||  |||  ||||||||| | |||| ||||||||| |||||||     
T  15869819 ggggattcaaagagtcctaaccgttgtttacttttatgcaaccaaaaacaggtaactttttctattgcaaacagat-aaaattgcaatctcaaaccctta 15869721  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggag-ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatt 222  Q
    ||| || ||||||||||| | ||||||||||||||||  | ||  | ||||||| |||| | |||   |  ||||||||||||||| |||||||||||||    
T  15869720 tctattttattttatatcgtcaacttaaaataagtaa-cgcagactatttagacaaaacaaaaatccttgcggatacgatactctacttatcactttatt 15869622  T
Q  223 acttgctaaatgatttggtacacttgcctaatcc 256  Q
    ||||| |||| |||||| ||||||||||||||||    
T  15869621 acttggtaaacgatttgatacacttgcctaatcc 15869588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 81 - 260
Target Start/End: Complemental strand, 4986723 - 4986544
Alignment:
Q  81 tgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaa 180  Q
    ||||||| | ||||||| | |||| |||||||||||||||||  | ||| |||||| |||| | ||||||||||||||||   ||| | |||||||||||    
T  4986723 tgctctgcttcaaacagataaaaattgcaatctctaacccttaacacttttattttttatcgtcaacttaaaataagtaacgcgagctatttagacgaaa 4986624  T
Q  181 cgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatc 260  Q
    |||||||  || ||| ||| |||||||| | | |||||||||||||| |||| ||||||||||||||| |||||||||||    
T  4986623 cgacaatccatgtgggtactatactctactcagcactttattacttggtaaacgatttggtacacttgtctaatccgatc 4986544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 81 - 260
Target Start/End: Complemental strand, 4990821 - 4990642
Alignment:
Q  81 tgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaa 180  Q
    ||||||| | ||||||| | |||| |||||||||||||||||  | ||| |||||| |||| | ||||||||||||||||   ||| | |||||||||||    
T  4990821 tgctctgcttcaaacagataaaaattgcaatctctaacccttaacacttttattttttatcgtcaacttaaaataagtaacgcgagctatttagacgaaa 4990722  T
Q  181 cgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatc 260  Q
    |||||||  || ||| ||| |||||||| | | |||||||||||||| |||| ||||||||||||||| |||||||||||    
T  4990721 cgacaatccatgtgggtactatactctactcagcactttattacttggtaaacgatttggtacacttgtctaatccgatc 4990642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 13 - 256
Target Start/End: Complemental strand, 5108801 - 5108559
Alignment:
Q  13 aatatatatatggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtca-cttgctctgatgcaaacagttcaaaactgcaa- 110  Q
    |||||| ||| ||||||||||||| | ||||||||  ||||||||||||||||||||| || || | ||||||||  ||||||||| | |||| || ||     
T  5108801 aatataaatagggggattcaaagaatcctaaccgctgcttacttttctgcaaccaaaatcaagtaaacttgctctcttgcaaacagataaaaattgtaac 5108702  T
Q  111 tctctaacccttttctcttctattttatatcataaacttaaaa-taagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaa 209  Q
    ||||||||| | | ||||| ||||  ||||| | ||||||||| |||||  || || |||||| ||||||||||||||   | ||||||||||||||||     
T  5108701 tctctaaccatatactcttttatt--atatcgtcaacttaaaaataagtg-ttcgaattgtttggacgaaacgacaatccttgtggatacgatactctac 5108605  T
Q  210 ttatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    ||| |||||||||||||| ||||| |||||||||||||||| |||||    
T  5108604 tta-cactttattacttggtaaataatttggtacacttgccaaatcc 5108559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 50 - 225
Target Start/End: Original strand, 7492163 - 7492338
Alignment:
Q  50 cttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgc-aatctctaacccttttctcttctattttatatcat-aaac 147  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||| ||||||||||||||  ||||| ||  ||||||||| |||     
T  7492163 cttacttttctgcaaccaaaaacaggtaacttgctctgttgcaaacagttaaaaattgcaaatctctaacccttaactctttta--ttatatcatcaaaa 7492260  T
Q  148 ttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattact 225  Q
    | ||||||||||||   | ||||||  ||||||| |||||   | |||||||||||||||| |||||| |||||||||    
T  7492261 taaaaataagtaatgcaaattgtttgaacgaaacaacaatccttgtggatacgatactctacttatcattttattact 7492338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 27 - 258
Target Start/End: Complemental strand, 16365927 - 16365696
Alignment:
Q  27 gattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa-tctctaacccttttc 125  Q
    ||||| |||| | ||||||||  ||||||||| |||||||||||||| || |||||||| |||||||| || |||||| || || ||||||| ||||  |    
T  16365927 gattcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacatgtaacttgctcagatgcaaatagatcaaaattgaaaatctctaaaccttaac 16365828  T
Q  126 tcttctattttatatcataaacttaaaa-taagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattac 224  Q
    |||| ||||  ||||| | ||||||||| |||||||   || ||||||  || ||||||||||  || |||||||||||||||| || | ||||||||||    
T  16365827 tcttttatt--atatcgtcaacttaaaaataagtaacgcgaattgtttgcacaaaacgacaatccatgtggatacgatactctactttttactttattac 16365730  T
Q  225 ttgctaaatgatttggtacacttgcctaatccga 258  Q
    ||| |||| ||||||||||||||  |||||||||    
T  16365729 ttggtaaacgatttggtacacttttctaatccga 16365696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 9500542 - 9500429
Alignment:
Q  151 aaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    |||||||||||  || ||||||||||||||| |||||   | |||||||||||||||||| ||||| |||||||||| |||||||||| |||||||||||    
T  9500542 aaataagtaatgcgaattgtttagacgaaacaacaatccttgtggatacgatactctaatgatcacattattacttggtaaatgattttgtacacttgcc 9500443  T
Q  251 taatccgatcatca 264  Q
    |||| |||||||||    
T  9500442 taattcgatcatca 9500429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 167 - 264
Target Start/End: Original strand, 23099969 - 23100066
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||| |||||||||||||| ||| |||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||||| ||| |||||    
T  23099969 ttgtttggacgaaacgacaatctatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacacttgcctaattcgaacatca 23100066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 8054085 - 8054158
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  8054085 gaaacgacaattcatgtggatacgatactctaattatcactttattacttggtaaacgatttggtacacttgcc 8054158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 264
Target Start/End: Original strand, 8978880 - 8979120
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtca-cttgctctgatgcaaacagttcaaaactgcaatctctaaccctt 122  Q
    ||||||| ||||| | ||||| ||  |||| |||||||||||||||||||||| | |||| |||  ||||||||| | |||| |||||   |||||||||    
T  8978880 ggggatttaaagaatcctaactgctgcttatttttctgcaaccaaaaacaggtaaacttgttctattgcaaacagatgaaaattgcaaatcctaaccctt 8978979  T
Q  123 ttctcttctattttatatcataaactta---aaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcacttt 219  Q
    || |||| ||| || |     |||||||   |||||||||||  || |||||| |||||||| |||||  || |||||| ||||||||| ||||||||||    
T  8978980 ttatcttttatattgtc----aaacttaccaaaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatatgatactctacttatcacttt 8979075  T
Q  220 attacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||||| ||||||||||||||||||| ||  |||||| |||||    
T  8979076 attacttggtaaatgatttggtacactttccatatccgaccatca 8979120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 1584647 - 1584529
Alignment:
Q  145 aacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtaca 244  Q
    ||||||||||||||||   || ||||||||||||||| |||||   | |||||||||||||| | |||||||||||||||||| ||||||| ||||||||    
T  1584647 aacttaaaataagtaacgcgatttgtttagacgaaacaacaatccctgtggatacgatactc-acttatcactttattacttggtaaatga-ttggtaca 1584550  T
Q  245 cttgcctaatccgatcatcac 265  Q
    |||||||||||||| ||||||    
T  1584549 cttgcctaatccgaccatcac 1584529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 255
Target Start/End: Complemental strand, 6013816 - 6013587
Alignment:
Q  25 gggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaact-gcaatctctaacccttt 123  Q
    ||||||||||||||  ||||||   || |||||||||||||||||  || || | ||||| || ||||||||  | |||| | |||||| ||||||||||    
T  6013816 gggattcaaagagtcataaccgttgctcacttttctgcaaccaaa--catgtaaattgctttgttgcaaacaaataaaaaattgcaatcgctaacccttt 6013719  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
     ||||| ||||||||||||| ||  ||||||||||||    | |||||| ||  ||| || |||   | |||||||||||||||| ||||||||| | ||    
T  6013718 actcttttattttatatcatcaaactaaaataagtaaagccaattgtttggataaaatgagaatccttgtggatacgatactctacttatcacttaagta 6013619  T
Q  224 cttgctaaatgatttggtacacttgcctaatc 255  Q
    |||| |||||||||||||||||||||||||||    
T  6013618 cttgataaatgatttggtacacttgcctaatc 6013587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 257
Target Start/End: Original strand, 9731517 - 9731734
Alignment:
Q  40 ctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa-tctctaacccttttctcttctattttat 138  Q
    ||||||||  ||||||||| ||||||||||||||||| ||||||| || | || | || | |||| ||||| |||||||  | |  ||||| ||||||||    
T  9731517 ctaaccgctgcttacttttatgcaaccaaaaacaggtaacttgctatgttacacatagataaaaattgcaaatctctaattcgtaactcttttattttat 9731616  T
Q  139 atcat-aaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatt 237  Q
      ||| ||||| |||||||||||   || |||||| ||||||||||||||   | ||| |||||||||||| ||||||||||| |||||  |||| ||||    
T  9731617 --catcaaactaaaaataagtaacgcgaattgtttggacgaaacgacaatccttgtggttacgatactctacttatcactttactactttttaaacgatt 9731714  T
Q  238 tggtacacttgcctaatccg 257  Q
    ||||||||||||||||||||    
T  9731715 tggtacacttgcctaatccg 9731734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 264
Target Start/End: Complemental strand, 18662664 - 18662426
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    |||||||| |||||| ||||||||  ||||| ||||||||||||||| ||||| |||||||||| ||||||||  | |||| |||||| |||||| ||      
T  18662664 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctctgttgcaaacaaataaaaattgcaatatctaactctca 18662566  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
      |||| ||||| ||||  |   |   ||||||||||   || |||||| ||||||||||||||   | |||||||||||||||| ||||||||||| |     
T  18662565 aatcttttattt-atattttgttcaccaaataagtaacgtgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttagtg 18662467  T
Q  224 cttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||| |||| |||||| ||||||||| ||||||||||||||    
T  18662466 cttggtaaacgatttgatacacttgcttaatccgatcatca 18662426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 25 - 253
Target Start/End: Complemental strand, 4786064 - 4785833
Alignment:
Q  25 gggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgc----aatctctaaccc 120  Q
    ||||||| |||| | ||||||||  ||||||||||||||||||||||||||| |||||||||  |||||| || | ||||        ||||||||||||    
T  4786064 gggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaacttgctctattgcaaatagataaaaaaaattaaaaatctctaaccc 4785965  T
Q  121 ttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcacttta 220  Q
    ||  ||||| ||||||||||| | |||| |||||||||||   ||  || || ||||||||||||||   | |||||  ||||||||| |||||||||||    
T  4785964 ttaactcttttattttatatcgtcaactaaaaataagtaacgtgaagtgcttggacgaaacgacaatccctgtggatgtgatactctacttatcacttta 4785865  T
Q  221 ttacttgctaaatgatttggtacacttgcctaa 253  Q
    ||||||| | || |||||| |||||||||||||    
T  4785864 ttacttggt-aacgatttgatacacttgcctaa 4785833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 9864343 - 9864434
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccga 258  Q
    |||||||||||||||||||||   | |||||| ||||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  9864343 ttgtttagacgaaacgacaatccttgtggatatgatactctacttatcactttattacttggtaaacaatttggtacacttgcctaatccga 9864434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 38 - 255
Target Start/End: Original strand, 16297722 - 16297925
Alignment:
Q  38 ttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctatttta 137  Q
    ||||||||||  |||||||||||||||||||||| |||| |||| ||||| ||||||||  | |||| |||||| ||||||||||  ||||| | |||      
T  16297722 ttctaaccgctgcttacttttctgcaaccaaaaataggtaacttactctgttgcaaacatataaaaattgcaatttctaacccttaactcttttgttt-- 16297819  T
Q  138 tatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatt 237  Q
                ||||||||||||  || |||||| ||||||| ||||||  || || |||||||| |||| ||||||| |||||||||| ||||| |||    
T  16297820 ------------aaaataagtaatgtgaattgtttggacgaaatgacaatccatgtgaatacgataatctacttatcacattattacttggtaaattatt 16297907  T
Q  238 tggtacacttgcctaatc 255  Q
    ||||||||||||||||||    
T  16297908 tggtacacttgcctaatc 16297925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 257
Target Start/End: Complemental strand, 2564027 - 2563810
Alignment:
Q  40 ctaaccgcaacttacttttctgcaaccaaaaacaggtca-cttgctctgatgcaaacagttcaaaactgcaa-tctctaacccttttctcttctatttta 137  Q
    |||||||| |||||||||||||||| | ||| ||||| | ||||||||| ||||||||| | |||| | ||| |||||||||||| ||| || |    ||    
T  2564027 ctaaccgctacttacttttctgcaaactaaagcaggtaaacttgctctgttgcaaacagataaaaatttcaactctctaacccttatcttttat----ta 2563932  T
Q  138 tatcataaactta---aaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatg 234  Q
    |||| | ||||||   ||||||||||    | |||||| ||||||||||||||   | |||||||||||||||| ||| |||||||||||||| |||| |    
T  2563931 tatcgtgaacttacagaaataagtaacacaaattgtttggacgaaacgacaatccttgtggatacgatactctactta-cactttattacttggtaaacg 2563833  T
Q  235 atttggtacacttgcctaatccg 257  Q
    ||||||||||||||| |||||||    
T  2563832 atttggtacacttgcataatccg 2563810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 257
Target Start/End: Original strand, 3329547 - 3329765
Alignment:
Q  40 ctaaccgcaacttacttttctgcaaccaaaaacaggtca-cttgctctgatgcaaacagttcaaaactgcaa-tctctaacccttttctcttctatttta 137  Q
    ||||||||  |||||||||||||||||||||||| || | |||||| || ||||||||| | |||| ||||| |||||||||||| ||| |||    |||    
T  3329547 ctaaccgctgcttacttttctgcaaccaaaaacaagtaaacttgctatgttgcaaacagataaaaattgcaactctctaacccttatct-ttca---tta 3329642  T
Q  138 tatcataaactta---aaataagtaattggag-ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaat 233  Q
    ||   ||||||||   ||||||||||  | || |||||| || |||||||||||  || |||||||||||||||| |||||||||||||||||| |||||    
T  3329643 tacgttaaacttacaaaaataagtaac-gcagattgtttggatgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaat 3329741  T
Q  234 gatttggtacacttgcctaatccg 257  Q
     ||||| ||||||| |||||||||    
T  3329742 aatttgatacacttacctaatccg 3329765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 12181713 - 12181603
Alignment:
Q  145 aacttaaaataagtaattggagttgtttag-acgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtac 243  Q
    |||||||||||||||| | || |||||| | |||||||||||||| || |||||||| ||||||| || ||||||||||||||  |||| |||||||||     
T  12181713 aacttaaaataagtaactcgaattgtttgggacgaaacgacaattcatgtggatacggtactctacttctcactttattactttataaacgatttggtat 12181614  T
Q  244 acttgcctaat 254  Q
    |||||||||||    
T  12181613 acttgcctaat 12181603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 264
Target Start/End: Complemental strand, 1587908 - 1587666
Alignment:
Q  20 atatggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctct--aa 117  Q
    ||||||||||||||||| |  || ||||  ||||||||||||||||||| |   ||| |||||||||| ||||||||  | |||| ||||||||||  ||    
T  1587908 atatggggattcaaagattcatatccgctgcttacttttctgcaaccaaga---ggtaacttgctctgttgcaaacaaataaaaattgcaatctctctaa 1587812  T
Q  118 cccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcact 217  Q
    ||||    |||| ||||||||||| | ||   |||||| ||||   || |||||| || ||||| || || ||| | |||| ||||||||||||||||||    
T  1587811 ccctaaa-tcttttattttatatcgtcaaaacaaaataggtaacgcgaattgtttggatgaaacaactatctatgtagatatgatactctaattatcact 1587713  T
Q  218 ttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||| |||||  |||| ||||||||||| ||||||||||||| |||||    
T  1587712 ttactacttagtaaacgatttggtacatttgcctaatccgaccatca 1587666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 264
Target Start/End: Complemental strand, 31493012 - 31492915
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||| ||| ||||||||||  || |||||||||||||||| ||||||||||||||| || |||| |||||| ||||||||||| |||||| |||||    
T  31493012 ttgtttggacaaaacgacaatccatgtggatacgatactctacttatcactttattacctggtaaacgatttgatacacttgcctgatccgaccatca 31492915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 8054489 - 8054589
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| |||||||||||||||  | || ||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||    
T  8054489 aaaataagtaacaagaattgtttggacgaaacgacaattcctgtgaatacgatactctacttatcactttattatttggtaaacgatttggtacacttgc 8054588  T
Q  250 c 250  Q
    |    
T  8054589 c 8054589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 18368980 - 18369080
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    ||||||||||| | || |||||| ||||||||||||||   ||||||||| |||||||| |||||||||||||||||| ||||  |||| ||||||||||    
T  18368980 aaaataagtaactagaattgtttggacgaaacgacaatccctatggatacaatactctacttatcactttattacttggtaaactatttagtacacttgc 18369079  T
Q  250 c 250  Q
    |    
T  18369080 c 18369080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 51 - 264
Target Start/End: Complemental strand, 19153493 - 19153283
Alignment:
Q  51 ttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa-tctct-aacccttttctcttctattttatatcataaact 148  Q
    |||||||||||||||||||||||||| ||||| | || ||||||||| | |||| ||||| || || ||||||| |||||| ||||||||  | | | ||    
T  19153493 ttacttttctgcaaccaaaaacaggtaacttgttatgttgcaaacagataaaaattgcaaatcccttaacccttatctctt-tattttat--cgtcacct 19153397  T
Q  149 taaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    ||||||||||||   ||||| ||| ||| |||||||||   ||  ||||  ||||||| | |||||||||||||||||| |||| |||||||||||||||    
T  19153396 taaaataagtaacgcgagttatttggacaaaacgacaacc-atgcggatgtgatactc-atttatcactttattacttggtaaaagatttggtacacttg 19153299  T
Q  249 cctaatccgatcatca 264  Q
    ||||||| || |||||    
T  19153298 cctaatctgaccatca 19153283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 51 - 264
Target Start/End: Complemental strand, 20752892 - 20752682
Alignment:
Q  51 ttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa-tctct-aacccttttctcttctattttatatcataaact 148  Q
    |||||||||||||||||||||||||| ||||| | || ||||||||| | |||| ||||| || || ||||||| |||||| ||||||||  | | | ||    
T  20752892 ttacttttctgcaaccaaaaacaggtaacttgttatgttgcaaacagataaaaattgcaaatcccttaacccttatctctt-tattttat--cgtcacct 20752796  T
Q  149 taaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    ||||||||||||   ||||| ||| ||| |||||||||   ||  ||||  ||||||| | |||||||||||||||||| |||| |||||||||||||||    
T  20752795 taaaataagtaacgcgagttatttggacaaaacgacaacc-atgcggatgtgatactc-atttatcactttattacttggtaaaagatttggtacacttg 20752698  T
Q  249 cctaatccgatcatca 264  Q
    ||||||| || |||||    
T  20752697 cctaatctgaccatca 20752682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 2350775 - 2350854
Alignment:
Q  178 aaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    ||||||||||  || ||||||||||| |||| ||| || ||||||||||| |||||||||||||||||||||||||||||    
T  2350775 aaacgacaatccatgtggatacgataatctacttagcagtttattacttggtaaatgatttggtacacttgcctaatccg 2350854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 5797578 - 5797496
Alignment:
Q  182 gacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||||||| || |||||||||||||||| |||| ||||||||||||| |||  |||||| |||||||||||||||||| |||||    
T  5797578 gacaattcatgtggatacgatactctacttattactttattacttggtaagcgatttgttacacttgcctaatccgaccatca 5797496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 166 - 264
Target Start/End: Original strand, 14755146 - 14755244
Alignment:
Q  166 gttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||||||||||||| |||||   | |||||| ||||||||| || |||||||| |||||| |||| ||||||||||||||| ||||||||| |||||    
T  14755146 gttgtttagacgaaacaacaatacttgtggatatgatactctacttctcactttactacttgataaacgatttggtacacttgtctaatccgaccatca 14755244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 253
Target Start/End: Complemental strand, 4818976 - 4818833
Alignment:
Q  109 aatctctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactcta 208  Q
    ||||||||||||||  ||||| ||||||||||| | |||| |||||||||||   ||  || || ||||||||||||||   | |||||  |||||||||    
T  4818976 aatctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacgtgaagtgcttggacgaaacgacaatccctgtggatgtgatactcta 4818877  T
Q  209 attatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
     |||||||||||||||||| | || |||||| |||||||||||||    
T  4818876 cttatcactttattacttggt-aacgatttgatacacttgcctaa 4818833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 10937674 - 10937598
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||||||||  || ||||||||||||| || |||||||||||||||||| |||| |||||| |||||||||||||    
T  10937674 gaaacgacaatccatgtggatacgatactatacttatcactttattacttggtaaacgatttgatacacttgcctaa 10937598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 10584513 - 10584592
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    |||||||||||  || ||||||||||||| |  |||||||||||||||||| |||| ||||||||||||||| |||||||    
T  10584513 gaaacgacaatccatgtggatacgatactttgcttatcactttattacttgataaacgatttggtacacttgtctaatcc 10584592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 167 - 266
Target Start/End: Original strand, 11221181 - 11221280
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatcact 266  Q
    ||||||| |||||||||||||   | ||||||| |||||||| |||||| ||||||||||  |||| |||||||||||||||| |||||| | |||||||    
T  11221181 ttgtttacacgaaacgacaatccctgtggatacaatactctacttatcaatttattacttagtaaacgatttggtacacttgcttaatccaaccatcact 11221280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 264
Target Start/End: Complemental strand, 5530103 - 5530006
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||| |||||||||| ||| | | |||||||||| || || |||||| ||||||||||| ||||  ||||||||||| |||||||||||| |||||    
T  5530103 ttgtttggacgaaacgaaaatctctgtggatacgatgctttacttatcattttattacttggtaaacaatttggtacacctgcctaatccgaccatca 5530006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 16306748 - 16306679
Alignment:
Q  195 gatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||||||||||| |||||||||||||||||| |||| |||||  |||||||| ||||||||| |||||    
T  16306748 gatacgatactctacttatcactttattacttgttaaaggattttatacacttgtctaatccgaccatca 16306679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 7397266 - 7397179
Alignment:
Q  178 aaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatcact 266  Q
    ||||||||||  || |||||||||||||||| ||| |||||||||||||| |||| | |||||||||||| |||||||| | |||||||    
T  7397266 aaacgacaatccatgtggatacgatactctagtta-cactttattacttggtaaacggtttggtacactttcctaatccaaccatcact 7397179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 9916622 - 9916562
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||||||||||||| |||| |||||||||| || |||||||||||||| ||||||||||    
T  9916622 tggatacgatactctacttattactttattacgtggtaaatgatttggtatacttgcctaa 9916562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 9924534 - 9924474
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||||||||||||| |||| |||||||||| || |||||||||||||| ||||||||||    
T  9924534 tggatacgatactctacttattactttattacgtggtaaatgatttggtatacttgcctaa 9924474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 12329738 - 12329667
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||||||| |||||||| |||||| ||| ||||||| |||| ||||||||||| ||||||||||||| |||||    
T  12329738 tggatactatactctatttatcaatttcttacttggtaaacgatttggtacatttgcctaatccgaccatca 12329667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 13759878 - 13759957
Alignment:
Q  168 tgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    ||||| ||||||||||||||   | |||||| ||||||||| |||||||||||||| ||| |||| ||||||||||||||    
T  13759878 tgtttggacgaaacgacaatccttgtggatatgatactctacttatcactttattaattggtaaacgatttggtacactt 13759957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 18466063 - 18466001
Alignment:
Q  191 tatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||||||| ||||||| |||||||||||||| ||| ||||||||||||||  |||||||||    
T  18466063 tatggatacgttactctacttatcactttattatttgataaatgatttggtatccttgcctaa 18466001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 1882451 - 1882362
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    ||||||| | |||||||| |||||||||||||| |||| ||| |||||| | ||||||||  |||| ||||||  |||||||||||||||    
T  1882451 ttgtttatatgaaacgaccatttatatggatacaataccctagttatcattgtattacttagtaaacgatttgtcacacttgcctaatcc 1882362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 9131135 - 9131038
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgc-aatctctaaccc 120  Q
    |||||||| |||| | ||||||||| ||||||||| ||||||||||||||| | |||||||||  ||||||||  | |||| ||| ||||||||||||    
T  9131135 ggggattcgaagaatcctaaccgcagcttacttttttgcaaccaaaaacagttaacttgctctattgcaaacaaataaaaattgcaaatctctaaccc 9131038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 9261286 - 9261197
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    ||||||| |||||| ||||||  ||||||||||||||||||  |||||| ||| ||||||| |||| |||| |||| | |||||||||||    
T  9261286 ttgtttaaacgaaatgacaatccatatggatacgatactctgcttatcatttttttacttggtaaacgattaggtaaagttgcctaatcc 9261197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 264
Target Start/End: Complemental strand, 18495455 - 18495358
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||||||||||||||||||    ||||||||  |||| || |||||||||||||||||  ||||  |||| ||||||||| ||||||||| |||||    
T  18495455 ttgtttagacgaaacgacaatccccatggatacattactttacttatcactttattacttagtaaacaatttagtacacttgactaatccgaccatca 18495358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 21227233 - 21227184
Alignment:
Q  195 gatacgatactctaattatcactttattacttgctaaatgatttggtaca 244  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  21227233 gatacgatactctacttatcactttattactttgtaaatgatttggtaca 21227184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 21230390 - 21230305
Alignment:
Q  171 ttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    ||||||||||||| |||   |||| ||||||||||||| |||||| ||||||| ||| |||| |||||| || |||||||||||||    
T  21230390 ttagacgaaacgataatccctatgaatacgatactctacttatcattttattatttggtaaacgatttgatatacttgcctaatcc 21230305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 255
Target Start/End: Complemental strand, 1814153 - 1814109
Alignment:
Q  211 tatcactttattacttgctaaatgatttggtacacttgcctaatc 255  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||    
T  1814153 tatcactttattacttggtaaataatttggtacacttgcctaatc 1814109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 5047434 - 5047489
Alignment:
Q  197 tacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    ||||||| |||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  5047434 tacgataatctactta-cactttattacttggtaaatgatttggtacacttgcctaa 5047489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 7397350 - 7397274
Alignment:
Q  40 ctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctcta 116  Q
    ||||||||  ||||||||||||||||||||||||| | ||||| | || ||||||||| | |||| |||||||||||    
T  7397350 ctaaccgctgcttacttttctgcaaccaaaaacagataacttgttttgttgcaaacagataaaaattgcaatctcta 7397274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 39273199 - 39273251
Alignment:
Q  174 gacgaaacgacaatttatatggatacgatactctaattatcactttattactt 226  Q
    ||||||||||||||  ||||| ||||||||||||| |||||||||||||||||    
T  39273199 gacgaaacgacaatccatatgaatacgatactctacttatcactttattactt 39273251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 1872857 - 1872778
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    |||||||||| |||| |||||||||||||||| |||||| | ||||||||  | || ||||||  |||||||||||||||    
T  1872857 gaaacgacaacttatgtggatacgatactctacttatcattgtattacttagtgaacgatttgtcacacttgcctaatcc 1872778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 4579179 - 4579089
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccga 258  Q
    |||||| ||| ||| |||||| | | |||||||||||||||| ||||||| |||||||||  |||| ||||||| ||||||||||| |||||    
T  4579179 ttgtttggacaaaaagacaatctctttggatacgatactctacttatcac-ttattacttagtaaacgatttggaacacttgcctagtccga 4579089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 17077227 - 17077120
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| ||||||||||||||    |||||||| ||||||||  ||||||||||||| ||| ||||  |||||||||| |||     
T  17077227 aaaataagtaacatgaattgtttggacgaaacgacaatccccatggatacaatactctacctatcactttattatttgataaacaatttggtacatttgt 17077128  T
Q  250 ctaatccg 257  Q
    ||||||||    
T  17077127 ctaatccg 17077120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 18467533 - 18467474
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattactt 226  Q
    |||||||||||||||||||||  || ||||||| ||||| || |||||||||||||||||    
T  18467533 ttgtttagacgaaacgacaatccatgtggatacaatactttacttatcactttattactt 18467474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 9245263 - 9245174
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    ||||||| |||||| ||||||  || |||||||||||||||  ||| || ||| ||||||| |||| |||| |||||| |||||||||||    
T  9245263 ttgtttaaacgaaatgacaatccatgtggatacgatactctgcttaccatttttttacttggtaaacgattaggtacagttgcctaatcc 9245174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 258
Target Start/End: Complemental strand, 10648678 - 10648569
Alignment:
Q  149 taaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    ||||||||||||   || ||||||||| |||||||||||   |  | ||| ||||||||| |||||||||||||||||| |||| |||||| ||  |||     
T  10648678 taaaataagtaacacgaattgtttagatgaaacgacaatccgtgcgcatatgatactctatttatcactttattacttggtaaacgatttgatatgcttt 10648579  T
Q  249 cctaatccga 258  Q
    ||||||||||    
T  10648578 cctaatccga 10648569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 167 - 264
Target Start/End: Original strand, 14195990 - 14196086
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||| |||||||| | ||||  | |||||||| |||| || ||| |||||||||| ||| |||| |||||||||||||||||||||| || |||||    
T  14195990 ttgtttggacgaaacaataattcttgtggatacggtactttactta-cactttattatttgataaacgatttggtacacttgcctaatctgaccatca 14196086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 177 - 265
Target Start/End: Complemental strand, 18449314 - 18449225
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcct-aatccgatcatcac 265  Q
    |||||||||||   ||||||||||||| | || || ||||||||||||||| ||||  ||||| ||||||||||| ||||||| ||||||    
T  18449314 gaaacgacaatccctatggatacgatattatacttctcactttattacttggtaaacaatttgatacacttgcctaaatccgaccatcac 18449225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 11803179 - 11803103
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattactt 226  Q
    |||||||||||   || |||||| ||||||| ||||||   | |||||||||||||||| |||||||||||||||||    
T  11803179 aaaataagtaacgcgaattgtttggacgaaaggacaatccctgtggatacgatactctacttatcactttattactt 11803103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 12391257 - 12391181
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    ||||||||||||  | || |||||| |||||  |||||||||||||| ||| ||||  |||||||||||||||||||    
T  12391257 gaaacgacaattcctgtgaatacgacactcttcttatcactttattatttgataaactatttggtacacttgcctaa 12391181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 17151799 - 17151858
Alignment:
Q  198 acgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccga 258  Q
    ||||||||||| |||||| ||||||  ||| || |||||||||||||||||||||||||||    
T  17151799 acgatactctacttatcaatttattt-ttggtatatgatttggtacacttgcctaatccga 17151858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 18661646 - 18661590
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    ||||||| |||||||| |||||||||||||  ||| |||| ||||||||||||||||    
T  18661646 tggatacaatactctacttatcactttattgtttggtaaacgatttggtacacttgc 18661590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 26134791 - 26134850
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||||||||||||| ||| || ||||||||||| |||| ||||||||||||||| ||||    
T  26134791 tggatacgatactctactta-cattttattacttggtaaacgatttggtacacttgtctaa 26134850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 6006145 - 6006072
Alignment:
Q  41 taaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctcta 116  Q
    ||||||| |||||||||||||| ||| ||||||||| |||| ||||| ||||||||| | |||| |||||||||||    
T  6006145 taaccgctacttacttttctgccacc-aaaacaggtaacttactctgttgcaaacagat-aaaattgcaatctcta 6006072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 250
Target Start/End: Complemental strand, 13418615 - 13418533
Alignment:
Q  168 tgtttagacgaaacgacaatttatatggatacgatactctaattatcac-tttattacttgctaaatgatttggtacacttgcc 250  Q
    ||||| ||||||| ||||||   |||||||||||||||||| ||||||| ||||||||||| | || || ||||||||||||||    
T  13418615 tgtttggacgaaaggacaatccctatggatacgatactctacttatcacttttattacttggttaacga-ttggtacacttgcc 13418533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 21912525 - 21912588
Alignment:
Q  195 gatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccga 258  Q
    |||||||||||| | |||||||||||||| ||| ||||  ||||| ||||||||||| ||||||    
T  21912525 gatacgatactcaacttatcactttattatttgataaacaatttgatacacttgcctgatccga 21912588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 265
Target Start/End: Original strand, 22339328 - 22339429
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcacttta---ttacttgctaaatgatttggtacacttgcctaatccgatcatc 263  Q
    |||||| ||||||||||||||   |  |||| ||||||| || |||||||||||   ||||||| |||||||||||||||| ||| ||||| ||| ||||    
T  22339328 ttgtttggacgaaacgacaatccttgcggatgcgatactttacttatcactttaatattacttgataaatgatttggtacatttgtctaattcgaccatc 22339427  T
Q  264 ac 265  Q
    ||    
T  22339428 ac 22339429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 1848270 - 1848325
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    ||||||||||||| || |||||||||||||||||| || |  ||||||||||||||||    
T  1848270 tggatacgatactgtacttatcactttattacttggtaca--atttggtacacttgcc 1848325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 257
Target Start/End: Complemental strand, 6042534 - 6042453
Alignment:
Q  175 acgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    ||||||||||||  | | |||||||||||||||| ||| || |||||||| || |||| |||||| |||||||| ||||||||    
T  6042534 acgaaacgacaacctctgtggatacgatactctactta-cattttattacatggtaaacgatttgatacacttgtctaatccg 6042453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 23093363 - 23093306
Alignment:
Q  195 gatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    ||||| |||||||| ||| |||||||||||||  |||| ||||||||||||||||||||    
T  23093363 gatacaatactctactta-cactttattacttagtaaacgatttggtacacttgcctaa 23093306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 140339 - 140251
Alignment:
Q  25 gggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctc 114  Q
    |||||||||||| | || ||||| ||| || ||||||||| | ||||||||| |||||||||| ||||||||| | ||||  ||||||||    
T  140339 gggattcaaagaatcctgaccgctactaacatttctgcaa-ctaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 140251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 1848091 - 1848202
Alignment:
Q  13 aatatatatatggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggt-cacttgctctgatgcaaacagttcaaaactgcaa- 110  Q
    |||||||||| || ||||| |||| |  |||||||  ||||||||||||||||| |||||||||  |||||||||| | ||||||| | |||| |||||     
T  1848091 aatatatatagggagattcgaagaatcataaccgctgcttacttttctgcaacc-aaaacaggtaaacttgctctgtttcaaacagataaaaattgcaag 1848189  T
Q  111 -tctctaaccctt 122  Q
     ||||||||||||    
T  1848190 ctctctaaccctt 1848202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 13277578 - 13277525
Alignment:
Q  174 gacgaaacgacaatttatatggatacgatactctaattatcactttattacttg 227  Q
    ||||||| ||||||  || |||||||||||||||| |||||||| |||||||||    
T  13277578 gacgaaaggacaatccatgtggatacgatactctatttatcactgtattacttg 13277525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 18368853 - 18368926
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacag 97  Q
    |||||||||| || | |||||||   ||||||||||| ||||||||| ||||| ||||||| || |||||||||    
T  18368853 ggggattcaaggaatcctaaccgtttcttacttttctacaaccaaaagcaggtaacttgctttgttgcaaacag 18368926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 4819038 - 4819002
Alignment:
Q  50 cttacttttctgcaaccaaaaacaggtcacttgctct 86  Q
    |||||||||||||||||||||| |||| |||||||||    
T  4819038 cttacttttctgcaaccaaaaataggtaacttgctct 4819002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 6042675 - 6042623
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggt 76  Q
    ||||||||||||| | ||||||||  |||| ||||||||||||||||| ||||    
T  6042675 ggggattcaaagaatcctaaccgctgcttatttttctgcaaccaaaaaaaggt 6042623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 9130941 - 9130897
Alignment:
Q  214 cactttattacttgctaaatgatttggtacacttgcctaatccga 258  Q
    |||||||||||||| ||||  ||||| ||||||||||||||||||    
T  9130941 cactttattacttgataaacaatttgatacacttgcctaatccga 9130897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 9721004 - 9720964
Alignment:
Q  209 attatcactttattacttgctaaatgatttggtacacttgc 249  Q
    ||||||||||||||| ||| |||| ||||||||||||||||    
T  9721004 attatcactttattatttggtaaacgatttggtacacttgc 9720964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 5e-57; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 264
Target Start/End: Complemental strand, 32085687 - 32085448
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||| ||||||| ||||||||  ||||||||||||||||||||  ||||| |||||||||| ||||||||| | |||| ||||||||||||| |||     
T  32085687 ggggatttaaagagtcctaaccgctgcttacttttctgcaaccaaac-caggtaacttgctctgttgcaaacagataaaaattgcaatctctaactctta 32085589  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
     ||||| ||||||||||| | ||||||||||||||||   ||| ||||||||||||||||||||  || |||||| ||||||||| ||||||||||||||    
T  32085588 actcttttattttatatcgtcaacttaaaataagtaacacgagctgtttagacgaaacgacaatccatgtggatatgatactctacttatcactttatta 32085489  T
Q  224 cttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||| ||||  ||||||||||||| |||||||||| |||||    
T  32085488 cttggtaaacaatttggtacacttacctaatccgaccatca 32085448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 25 - 255
Target Start/End: Original strand, 20174512 - 20174740
Alignment:
Q  25 gggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaaccctttt 124  Q
    ||||||| |||||| ||||||||  |||||||||||   ||||||  ||||| | |||||||| ||||||||| | |||| | |||||||||||||||      
T  20174512 gggattcgaagagtgctaaccgctgcttacttttcttttaccaaa--caggtaatttgctctgttgcaaacagataaaaattccaatctctaacccttaa 20174609  T
Q  125 ctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattac 224  Q
    || || ||||||||||||| ||||||||||||||||   || |||||| ||||||||||||||  || |||| | ||||||||| |||||||||||||||    
T  20174610 ctattttattttatatcatcaacttaaaataagtaacatgaattgtttggacgaaacgacaatccatgtggaaatgatactctacttatcactttattac 20174709  T
Q  225 ttgctaaatgatttggtacacttgcctaatc 255  Q
    ||| |||| |||||||||||||| |||||||    
T  20174710 ttggtaaacgatttggtacactttcctaatc 20174740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 257
Target Start/End: Complemental strand, 25618780 - 25618549
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtca-cttgctctgatgcaaacagttcaaaactgcaa-tctctaaccct 121  Q
    |||||||| |||| ||| ||||||  ||||||||||||||||||||| ||||| | ||| ||||| ||||||||| | |||| ||||| ||||||||  |    
T  25618780 ggggattcgaagaattcgaaccgctgcttacttttctgcaaccaaaa-caggtaaactttctctgttgcaaacagataaaaattgcaaatctctaacttt 25618682  T
Q  122 tttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttat 221  Q
    |  ||||| ||||  ||||| | |||| ||||||||| |   || |||||||||||||||||||||  || |||||| ||||||||| ||||||||||||    
T  25618681 tcactcttttatt--atatcgtcaactaaaaataagttacgcgaattgtttagacgaaacgacaatccatgtggatatgatactctacttatcactttat 25618584  T
Q  222 tacttgctaaatgatttggtacacttgcctaatccg 257  Q
    |||||| | || |||||| ||| |||||||||||||    
T  25618583 tacttggt-aacgatttgatacgcttgcctaatccg 25618549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 50 - 257
Target Start/End: Complemental strand, 15339437 - 15339230
Alignment:
Q  50 cttacttttctgcaaccaaaaacaggtca-cttgctctgatgcaaacagttcaaaactgcaa-tctctaacccttttctcttctattttatatcataaac 147  Q
    |||||||||||||||| |||||||| | | ||||||||| ||||||||  | |||| ||||| |||||||||||| ||| || |    |||||| | |||    
T  15339437 cttacttttctgcaacaaaaaacagataaacttgctctgttgcaaacaaataaaaattgcaactctctaacccttatcttttat----tatatccttaac 15339342  T
Q  148 ttaaaa--taagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacac 245  Q
    ||| ||  |||||||    | |||||| ||||||||||||||  || |||||| ||||||||| || ||||||||||||||| |||||||||||||||||    
T  15339341 ttacaaagtaagtaacgctaattgtttggacgaaacgacaatccatgtggatatgatactctacttttcactttattacttggtaaatgatttggtacac 15339242  T
Q  246 ttgcctaatccg 257  Q
    ||||||||||||    
T  15339241 ttgcctaatccg 15339230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 24 - 257
Target Start/End: Original strand, 29719106 - 29719338
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtca-cttgctctgatgcaaacagttcaaaactgcaa-tctctaaccct 121  Q
    |||||||| |||| | ||||| ||  |||||||||||||||||||| |||||| | ||||||||| |||| |||  | |||| ||||| |||||||||||    
T  29719106 ggggattcgaagaatcctaactgctgcttacttttctgcaaccaaacacaggtaaacttgctctgttgcatacatataaaaattgcaactctctaaccct 29719205  T
Q  122 tttctcttctattttatatcat-aaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcacttta 220  Q
    | | | || |    |||| | | ||||| |||||||||||   || ||||||  |||||||||||||   | ||||||||||| |||| |||||||||||    
T  29719206 tatattttat----tataccgtcaaactaaaaataagtaacgcgaattgtttgaacgaaacgacaatccttgtggatacgataatctacttatcacttta 29719301  T
Q  221 ttacttgctaaatgatttggtacacttgcctaatccg 257  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  29719302 ttacttggtaaacgatttggtacacttgcctaatccg 29719338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 51 - 265
Target Start/End: Complemental strand, 13776536 - 13776323
Alignment:
Q  51 ttacttttctgcaaccaaaaacaggtca-cttgctctgatgcaaacagttcaaaactgcaa-tctct-aacccttttctcttctattttatatcataaac 147  Q
    ||||||||||| ||| |||||||||| | ||| ||||| ||||||||| | |||| ||||| ||||| ||||||| |||||| ||||||||  | | |||    
T  13776536 ttacttttctggaacaaaaaacaggtaatcttactctgttgcaaacagataaaaattgcaaatctcttaacccttatctctt-tattttat--cgtcaac 13776440  T
Q  148 ttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    |||||||||||||   | ||||||| ||||||| |||||| ||| |||||||||||||| | |||||||||||||| ||  |||| |||||| |||||||    
T  13776439 ttaaaataagtaacgtgggttgtttggacgaaatgacaatctatgtggatacgatactc-acttatcactttattatttaataaacgatttgctacactt 13776341  T
Q  248 gcctaatccgatcatcac 265  Q
    | ||||| ||| ||||||    
T  13776340 gtctaattcgaccatcac 13776323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 150 - 264
Target Start/End: Original strand, 17743476 - 17743590
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| |||||||||| |||  || |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  17743476 aaaataagtaacacgaattgtttggacgaaacgataatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgc 17743575  T
Q  250 ctaatccgatcatca 264  Q
    |  |||||| |||||    
T  17743576 catatccgaccatca 17743590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 144 - 266
Target Start/End: Original strand, 19200129 - 19200250
Alignment:
Q  144 aaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtac 243  Q
    ||||||||||||||||||  ||||||||| || |||||||||||   | |||||||||||||| | ||||||| |||||| ||| |||| ||||||||||    
T  19200129 aaacttaaaataagtaatgtgagttgtttggatgaaacgacaatccttgtggatacgatactc-acttatcacattattatttggtaaaagatttggtac 19200227  T
Q  244 acttgcctaatccgatcatcact 266  Q
    |||||||||| |||| |||||||    
T  19200228 acttgcctaacccgaccatcact 19200250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 150 - 255
Target Start/End: Original strand, 12953294 - 12953399
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| ||||||||||||||  || |||| || |||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  12953294 aaaataagtaacgcgaattgttttgacgaaacgacaatccatgtggacacaatactctacttattactttattacttgataaatgatttggtacacttgc 12953393  T
Q  250 ctaatc 255  Q
    ||||||    
T  12953394 ctaatc 12953399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 54 - 160
Target Start/End: Complemental strand, 29027690 - 29027585
Alignment:
Q  54 cttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaa 153  Q
    ||||||||||||||||  |||||||||||||||  ||||||||| | |||| ||||||||||||||||| |||||| ||||| |||||   |||||||||    
T  29027690 cttttctgcaaccaaat-caggtcacttgctctcttgcaaacagataaaaattgcaatctctaacccttatctcttttatttaatatcggcaacttaaaa 29027592  T
Q  154 taagtaa 160  Q
    |||||||    
T  29027591 taagtaa 29027585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 25888247 - 25888327
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    |||||||||||  || ||||||||||||| || |||||||||||||||||| ||||  |||||||||||||||||||||||    
T  25888247 gaaacgacaatccatgtggatacgatactgtacttatcactttattacttggtaaacaatttggtacacttgcctaatccg 25888327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 208
Target Start/End: Original strand, 28606082 - 28606236
Alignment:
Q  54 cttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaa 153  Q
    ||||| |||||| |||||||||| ||||| | ||  | |||||  | |||| ||||||||||||||||| |||||| |||| |||||| | |||||||||    
T  28606082 cttttatgcaacaaaaaacaggtaacttgttatgtcgtaaacaaataaaaattgcaatctctaacccttgtctcttttattatatatcgtcaacttaaaa 28606181  T
Q  154 taagtaattggagttgtttagacgaaacgacaatttatatggatacgatactcta 208  Q
    |||||||    || ||||||||||||||||||||     ||||||||||||||||    
T  28606182 taagtaacgccagctgtttagacgaaacgacaatcctagtggatacgatactcta 28606236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 27909162 - 27909219
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    |||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  27909162 tggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcc 27909219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 257
Target Start/End: Original strand, 26603375 - 26603457
Alignment:
Q  175 acgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    |||||| ||||||  ||||  ||||||||||||| |||||||||| ||||||| ||||  |||||||||||||||||||||||    
T  26603375 acgaaaagacaatccatataaatacgatactctacttatcacttttttacttgataaacaatttggtacacttgcctaatccg 26603457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 150 - 264
Target Start/End: Original strand, 45621881 - 45621995
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| ||||||||||||||   | | |||||||||||||| || ||||||||||||||| |||| ||||| |||||||| |    
T  45621881 aaaataagtaacacgaattgtttggacgaaacgacaatccttgtagatacgatactctacttctcactttattacttggtaaacgattttgtacactttc 45621980  T
Q  250 ctaatccgatcatca 264  Q
     |||||||| |||||    
T  45621981 ttaatccgaccatca 45621995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 25887805 - 25887878
Alignment:
Q  51 ttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgc-aatctctaacccttt 123  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||||| | |||| ||| |||||||||||||||    
T  25887805 ttacttttctgcaaccaaaaataggtaacttgctctgttgcaaacagataaaaattgcaaatctctaacccttt 25887878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 264
Target Start/End: Original strand, 30900861 - 30900958
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||||||||||||||| ||||| ||  ||||||| |||||||| |||||||||||||| ||| ||||  |||||||||   |||||||||||| |||||    
T  30900861 ttgtttagacgaaacaacaatatacgtggatacaatactctagttatcactttattatttggtaaacaatttggtacctatgcctaatccgaccatca 30900958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 28770484 - 28770548
Alignment:
Q  191 tatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatc 255  Q
    |||||||||||||||||| |||||||||||||| ||| |||| |||||||||||| ||| |||||    
T  28770484 tatggatacgatactctacttatcactttattatttggtaaaggatttggtacacgtgcttaatc 28770548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 17349437 - 17349352
Alignment:
Q  168 tgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatc 255  Q
    ||||| |||||||||||||| | | |||||||||||||||| ||| |||||||||||||| |||| ||||| ||||| ||||||||||    
T  17349437 tgtttggacgaaacgacaatctttgtggatacgatactctactta-cactttattacttggtaaacgatttagtaca-ttgcctaatc 17349352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 45553183 - 45553124
Alignment:
Q  196 atacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatc 255  Q
    |||||||| | || |||||||||||||||||| |||| ||||||||||||||||||||||    
T  45553183 atacgatattttacttatcactttattacttgataaacgatttggtacacttgcctaatc 45553124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 8447079 - 8447152
Alignment:
Q  179 aacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||||||  || ||||||||||| |||| |||| ||||||||||||| |||| ||||||||||||||||||||    
T  8447079 aacgacaatccatgtggatacgataatctacttat-actttattacttggtaaacgatttggtacacttgcctaa 8447152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 26603223 - 26603320
Alignment:
Q  13 aatatatatatggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa 110  Q
    |||||| ||| |||||||| |||| | ||||||||  ||||||||||| ||||||||||||||| |  ||||||| ||||||||| | |||| |||||    
T  26603223 aatataaatagggggattcgaagaatcctaaccgctgcttacttttctacaaccaaaaacaggtaaactgctctgttgcaaacagataaaaattgcaa 26603320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 8503113 - 8503173
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||| ||| ||||| ||||||| |||||||||| |||| ||||||||||||||||||||    
T  8503113 tggatatgatcctctacttatcacgttattacttggtaaacgatttggtacacttgcctaa 8503173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 31804924 - 31805004
Alignment:
Q  174 gacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaat 254  Q
    ||||||||| |||| | | ||||||| |||||||| |||||||||||||| ||| ||||  ||||||||||||| ||||||    
T  31804924 gacgaaacggcaatctctgtggatacaatactctacttatcactttattatttggtaaacaatttggtacactttcctaat 31805004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 265
Target Start/End: Original strand, 17635775 - 17635890
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   ||||| ||| |||||||||||||| | | |||||| ||| ||||| || || |||||||||||| |||| |||||| |||| ||||    
T  17635775 aaaataagtaacgtgagtttttttgacgaaacgacaatctctgtggatatgattctctacttttctctttattacttggtaaacgatttgctacatttgc 17635874  T
Q  250 ctaatccgatcatcac 265  Q
    |  |||||| ||||||    
T  17635875 catatccgaccatcac 17635890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 23011780 - 23011870
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccga 258  Q
    |||||||||| ||||||||||   | ||||||| ||| |||| ||| |||||||||||||| ||||  |||||||||||||||||| |||||    
T  23011780 ttgtttagacaaaacgacaatccttgtggatacaataatctactta-cactttattacttggtaaaaaatttggtacacttgcctattccga 23011870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 12557752 - 12557824
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcct-aatccgatcatcac 265  Q
    ||||| ||||| |||| ||| |||||||||||||| |||| |||||||||||||||||| ||||||| ||||||    
T  12557752 tggattcgatattctactta-cactttattacttggtaaaagatttggtacacttgcctaaatccgaccatcac 12557824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 24090926 - 24091003
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttg 227  Q
    |||||||||||   || |||||| ||||||| ||||||  || ||||||||||| |||| ||||||||||||||||||    
T  24090926 aaaataagtaacaagaattgtttggacgaaaggacaatccatgtggatacgatattctatttatcactttattacttg 24091003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 25196066 - 25196010
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    |||||| ||||||||| |||||||||||||||||| |||| || ||||||||||||||    
T  25196066 tggatatgatactctacttatcactttattacttggtaaacga-ttggtacacttgcc 25196010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 30411732 - 30411679
Alignment:
Q  195 gatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    |||||||||||||| ||||||||||||||| || |||| ||||| |||||||||    
T  30411732 gatacgatactctacttatcactttattacatggtaaaagatttcgtacacttg 30411679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 248
Target Start/End: Original strand, 11382654 - 11382851
Alignment:
Q  51 ttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa-tctctaacccttttctcttctattttata-tcataaact 148  Q
    |||||||||| |||| ||||||| || |||||||||| ||||||||| | |||  ||||| ||||||||  ||  ||||| ||| ||||  |||  ||||    
T  11382654 ttacttttctacaacaaaaaacaagtaacttgctctgttgcaaacagataaaatttgcaaatctctaacttttaactcttttatcttatcgtca--aact 11382751  T
Q  149 taaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
     |||||||||||   || || ||| || ||||  |||||| || |||||| ||||||||| ||||||||||||||  || |||| |||||| ||||||||    
T  11382752 aaaaataagtaacgcgaattatttggatgaaaatacaattcatgtggatatgatactctacttatcactttattatctggtaaacgatttgatacacttg 11382851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 254
Target Start/End: Original strand, 25885477 - 25885563
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaat 254  Q
    |||||| |||||||||||||||  | ||||||||||||| |  ||||||| |||||||||  |||| ||||||||||| | |||||||    
T  25885477 ttgtttggacgaaacgacaattcttgtggatacgatactattcttatcac-ttattactttgtaaacgatttggtacaatcgcctaat 25885563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 25939215 - 25939161
Alignment:
Q  191 tatggatacgatactctaattatcactttattacttgctaaatgatttggtacact 246  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||    
T  25939215 tatggatacgatactttactta-cactttattacttgataaatgatgtggtacact 25939161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 30411876 - 30411805
Alignment:
Q  40 ctaaccgcaacttacttttctgcaaccaaaaacaggt-cacttgctctgatgcaaacagttcaaaactgcaa 110  Q
    ||||||||  |||||||||||||||||||||||| ||  |||||||||| ||||||||| | |||| |||||    
T  30411876 ctaaccgctgcttacttttctgcaaccaaaaacatgtaaacttgctctgttgcaaacagataaaaattgcaa 30411805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 265
Target Start/End: Complemental strand, 5777298 - 5777201
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatcac 265  Q
    |||||| ||||||||||||||  |||| ||| ||||||| || |||  ||||||||| ||| |||| ||| || ||||||||||||||| || ||||||    
T  5777298 ttgtttggacgaaacgacaatccatatagattcgatactttacttaa-actttattatttgataaacgatatgatacacttgcctaatctgaccatcac 5777201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 17349573 - 17349499
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggt-cacttgctctgatgcaaacag 97  Q
    |||||||| |||| |||| |||||  ||||||||| |||||||||||||| ||  |||||||||| |||||||||    
T  17349573 ggggattcgaagaattctgaccgctgcttacttttttgcaaccaaaaacaagtaaacttgctctgttgcaaacag 17349499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 25530503 - 25530469
Alignment:
Q  193 tggatacgatactctaattatcactttattacttg 227  Q
    |||||||||||||||| ||||||||||||||||||    
T  25530503 tggatacgatactctacttatcactttattacttg 25530469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 25535330 - 25535296
Alignment:
Q  193 tggatacgatactctaattatcactttattacttg 227  Q
    |||||||||||||||| ||||||||||||||||||    
T  25535330 tggatacgatactctacttatcactttattacttg 25535296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 264
Target Start/End: Complemental strand, 28925603 - 28925507
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||| ||||||||||||||  |  ||||||| |  ||||| |||||||||||||||||| | || ||||| |||||||||||  |||||| |||||    
T  28925603 ttgtttggacgaaacgacaatccacgtggatacaacgctctacttatcactttattacttggt-aacgatttagtacacttgccatatccgaccatca 28925507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 23933420 - 23933515
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaaccc 120  Q
    ||||||||||||| | ||||||||  ||||||||| || |||| ||| || || |||||||||| ||||||||| | |||| |||||| | ||||||    
T  23933420 ggggattcaaagaatcctaaccgctgcttacttttgtgaaacc-aaaccaagtaacttgctctgttgcaaacagataaaaattgcaatgtataaccc 23933515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 5e-54; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 50 - 257
Target Start/End: Complemental strand, 17672200 - 17671994
Alignment:
Q  50 cttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaactt 149  Q
    ||||||||||||||||||||  ||||| |||||||||| ||||||||| | |||| |||||||||||||| ||  ||||| ||||||||||| | |||||    
T  17672200 cttacttttctgcaaccaaac-caggtaacttgctctgttgcaaacagataaaaattgcaatctctaacctttaactcttttattttatatcgttaactt 17672102  T
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   |||||||||||||||||| |||||  || ||||||| |||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  17672101 aaaataagtaacgcgagttgtttagacgaaacaacaatccatgtggatacaatactctacttatcactttattacttggtaaacgatttggtacacttgc 17672002  T
Q  250 ctaatccg 257  Q
    ||||||||    
T  17672001 ctaatccg 17671994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 24 - 264
Target Start/End: Complemental strand, 14649119 - 14648880
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||||||||||| |||||||    || ||||||| |||||||||||| || |||||||||| ||||||||| | |||| || ||||||||||||||     
T  14649119 ggggattcaaagagtcctaaccgttgtttccttttctacaaccaaaaacaagtaacttgctctgttgcaaacagataaaaattgaaatctctaaccctta 14649020  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
    | |||| ||||||||||| | ||||||||||||||||   ||| | |||||| |||||||||| |  | |||||||||||||||| ||||||||||||||    
T  14649019 tgtcttttattttatatcgtcaacttaaaataagtaacacgagctatttagaagaaacgacaa-tcctgtggatacgatactctacttatcactttatta 14648921  T
Q  224 cttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||| |||| |||||||||||||||||||||| || |||||    
T  14648920 cttggtaaacgatttggtacacttgcctaatctgaccatca 14648880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 59 - 256
Target Start/End: Original strand, 12578176 - 12578372
Alignment:
Q  59 ctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaataagt 158  Q
    |||||||||||| ||||| |||||||||| ||||||||| | |||| || ||||||||||||||| ||||| ||||||||||| | |||||||||||||     
T  12578176 ctgcaaccaaaa-caggtaacttgctctgttgcaaacagataaaaattgtaatctctaaccctttactcttttattttatatcgtcaacttaaaataaga 12578274  T
Q  159 aattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    ||    | |||||| ||| ||||||||||  || ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  12578275 aacgcaaattgtttggacaaaacgacaatccatgtggatacgatactctaattatcactttattatttggtaaatgatttggtacacttgcctaatcc 12578372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 19929579 - 19929777
Alignment:
Q  54 cttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaa 153  Q
    |||||||||||||||||||| || | |||||||| ||||||||| | |||| || ||||| |||||||| |||||| ||||||||||  | |||||||||    
T  19929579 cttttctgcaaccaaaaacatgtaatttgctctgttgcaaacagataaaaattgaaatctttaacccttatctcttttattttatattgtcaacttaaaa 19929678  T
Q  154 taagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgccta 252  Q
    |||||||   | | | ||||||||||||||||||  || |||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  19929679 taagtaacacgggctatttagacgaaacgacaatccatgtggatacgatactctatttatcactttgttacttggtaaatgatttggtacacttgccta 19929777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 264
Target Start/End: Complemental strand, 19092519 - 19092280
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    |||||| |||||||| |||||||| | ||||||||||| |||||||| ||||| | || ||||| || |||||| | |||| ||||||||||||| |||     
T  19092519 ggggatgcaaagagtcctaaccgctatttacttttctgtaaccaaaa-caggtaatttactctgttgtaaacagataaaaattgcaatctctaactctta 19092421  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
    |||||| ||||| ||||| | ||||||||||||| ||   ||||||||| ||||||||||||||  || || || |||||||||  ||||||||||||||    
T  19092420 tctcttttatttaatatcgtcaacttaaaataagcaacgtgagttgtttggacgaaacgacaatccatgtgaatgcgatactcttcttatcactttatta 19092321  T
Q  224 cttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||| ||||  ||||||||||||||||||||| || |||||    
T  19092320 cttgataaacaatttggtacacttgcctaatctgaccatca 19092280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 54 - 264
Target Start/End: Original strand, 17951201 - 17951410
Alignment:
Q  54 cttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaa 153  Q
    ||||||||||||||||  ||||| |||||||||| ||||||||| | |||| ||||||||||||||| |  ||||| ||||||||||| | |||||||||    
T  17951201 cttttctgcaaccaaat-caggtaacttgctctgttgcaaacagataaaaattgcaatctctaacccgtcactcttttattttatatcgtcaacttaaaa 17951299  T
Q  154 taagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||||   ||| |  |||||||||||||||| |   |||||||||||||| || ||||||||||| |||||| |||| ||||||||||||||| ||||    
T  17951300 taagtaacgcgagctagttagacgaaacgacaaatccaatggatacgatactttacttatcactttagtacttggtaaacgatttggtacacttgtctaa 17951399  T
Q  254 tccgatcatca 264  Q
    ||||| |||||    
T  17951400 tccgaccatca 17951410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 54 - 264
Target Start/End: Original strand, 17955053 - 17955262
Alignment:
Q  54 cttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaa 153  Q
    ||||||||||||||||  ||||| |||||||||| ||||||||| | |||| ||||||||||||||| |  ||||| ||||||||||| | |||||||||    
T  17955053 cttttctgcaaccaaat-caggtaacttgctctgttgcaaacagataaaaattgcaatctctaacccatcactcttttattttatatcgtcaacttaaaa 17955151  T
Q  154 taagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||||   ||| |  |||||||||||||||| |   |||||||||||||| || ||||||||||| |||||| |||| ||||||||||||||| ||||    
T  17955152 taagtaacgcgagctagttagacgaaacgacaaatccaatggatacgatactttacttatcactttagtacttggtaaacgatttggtacacttgtctaa 17955251  T
Q  254 tccgatcatca 264  Q
    ||||| |||||    
T  17955252 tccgaccatca 17955262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 26 - 254
Target Start/End: Complemental strand, 5679427 - 5679200
Alignment:
Q  26 ggattcaaagagttctaaccgcaacttacttttct-gcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaaccctttt 124  Q
    ||||||||||||| ||||  ||  ||||||||| | ||||||||| |  ||| |||||||||| | ||||||| | |||| |||||| ||||||||||      
T  5679427 ggattcaaagagtcctaatggctgcttactttttttgcaaccaaata--ggtaacttgctctgttacaaacagataaaaattgcaatgtctaacccttaa 5679330  T
Q  125 ctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattac 224  Q
    ||||| ||||||||||| | ||||||||||||||||   || |||||| |||||||| | | || || | |||||||||||||| | |||||||||||||    
T  5679329 ctcttttattttatatcgttaacttaaaataagtaacgcgaattgtttggacgaaacaaaagttcatgtagatacgatactctactaatcactttattac 5679230  T
Q  225 ttgctaaatgatttggtacacttgcctaat 254  Q
    ||| |||| ||||||||||||||| |||||    
T  5679229 ttggtaaacgatttggtacacttgtctaat 5679200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 24 - 264
Target Start/End: Original strand, 22357406 - 22357649
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||||||| ||| |||| ||   ||| ||||||||||| |||||||| || ||||||| |  ||||||||  | |||| ||||||||||||| |||     
T  22357406 ggggattcaaaaagtcctaaacgatgcttccttttctgcaatcaaaaacaagtaacttgctatattgcaaacaaataaaaattgcaatctctaactctta 22357505  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacga---tactctaattatcacttta 220  Q
    |||||| | ||||||||| | ||||| ||||||||||   ||  |||||| | |||||||||||  || |||||||||   |||| || |||||||||||    
T  22357506 tctcttattttttatatcgtcaactttaaataagtaacacgaactgtttaaatgaaacgacaatccatgtggatacgatagtactttacttatcacttta 22357605  T
Q  221 ttacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||    
T  22357606 ttacttggtaaatgatttagtacacttacctaatctgaccatca 22357649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 257
Target Start/End: Original strand, 19562049 - 19562285
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtca-cttgctctgatgcaaacagttcaaaactgcaatctc-taaccct 121  Q
    |||||||| |||| ||||||||||   |||||||||||||||||||||||||| | ||||||||| |||||| || | |||| ||||||    |||||||    
T  19562049 ggggattcgaagaattctaaccgctgattacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaagagataaaaattgcaattaaataaccct 19562148  T
Q  122 tttctcttctattttatatcataaacttaaaa--taagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcacttt 219  Q
    ||| |||| |||| || ||   ||||||||||  ||||||||   | |||||| || |||||||||||   | |||| |||||||| || ||||||||||    
T  19562149 tttatcttttattata-atgtcaaacttaaaaaataagtaatacaaattgtttggatgaaacgacaatacttgtggacacgatactttacttatcacttt 19562247  T
Q  220 attacttgctaaatgatttggtacacttgcctaatccg 257  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  19562248 attacttggtaaatgatttggtacacttgcttaatccg 19562285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 101 - 252
Target Start/End: Original strand, 22175914 - 22176064
Alignment:
Q  101 aaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacg 200  Q
    |||| |||||||||||||||||  ||||| ||||||||||||| |||| ||||||| ||   | | |||||| ||  ||| |||||| | |||||||||     
T  22175914 aaaattgcaatctctaacccttaactcttttattttatatcatcaactcaaaataattacgcgaa-ttgtttggagaaaatgacaatctctatggataca 22176012  T
Q  201 atactctaattatcactttattacttgctaaatgatttggtacacttgccta 252  Q
    |||||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  22176013 atactctacttatcactttattacttgataaacgatttggtacacttgccta 22176064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 150 - 264
Target Start/End: Original strand, 13128874 - 13128988
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   ||||||||| ||||||||||||||   ||||||||| |||||||| |||||| ||||||||||| |||| ||||||||||||||||    
T  13128874 aaaataagtaacgcgagttgtttggacgaaacgacaatccctatggatacaatactctacttatcattttattacttggtaaacgatttggtacacttgc 13128973  T
Q  250 ctaatccgatcatca 264  Q
    ||||| ||| |||||    
T  13128974 ctaattcgaacatca 13128988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 150 - 264
Target Start/End: Original strand, 13692669 - 13692783
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| | ||||||||||||  || |||||| ||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  13692669 aaaataagtaacacgaattgtttggtcgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaacgatttggtacacttgc 13692768  T
Q  250 ctaatccgatcatca 264  Q
    |||||| || |||||    
T  13692769 ctaatctgaccatca 13692783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 150 - 264
Target Start/End: Original strand, 21323875 - 21323989
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| |||||||||||||| ||| |||||||||||||||| | ||||| |||||| ||| |||| ||||| ||||||||||    
T  21323875 aaaataagtaacgcgaattgtttggacgaaacgacaatctatgtggatacgatactctactgatcacattattatttggtaaacgatttagtacacttgc 21323974  T
Q  250 ctaatccgatcatca 264  Q
    ||||||||| |||||    
T  21323975 ctaatccgaccatca 21323989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 50 - 256
Target Start/End: Original strand, 17337035 - 17337240
Alignment:
Q  50 cttacttttctgcaaccaaaaacaggtca-cttgctctgatgcaaacagttcaaaactgcaa-tctctaacccttttctcttctattttatatcataaac 147  Q
    ||||||||| ||||||||||||||||| | ||||||||| || |||||| | |||| ||||| |||| |||||||| ||||| ||||  ||||| | |||    
T  17337035 cttacttttatgcaaccaaaaacaggtaaacttgctctgttgtaaacagataaaaattgcaaatctcaaaccctttactcttttatt--atatcgtcaac 17337132  T
Q  148 ttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    | |||||||||||    | |||||| ||||||| |||||| | | |||||||||||||||| ||||||| |||||||| | | |||||||||||| ||||    
T  17337133 taaaaataagtaacgcaaattgtttggacgaaatgacaatctctttggatacgatactctacttatcacgttattactcggt-aatgatttggtagactt 17337231  T
Q  248 gcctaatcc 256  Q
     | ||||||    
T  17337232 acttaatcc 17337240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 167 - 264
Target Start/End: Complemental strand, 19882722 - 19882625
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||| ||||||||||||||  || | |||||||||||||| | |||||||||||||||| |||| ||||| ||||||||||||||||||| |||||    
T  19882722 ttgtttggacgaaacgacaatccatgttgatacgatactctactaatcactttattacttgataaacgattttgtacacttgcctaatccgaccatca 19882625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 264
Target Start/End: Complemental strand, 7582522 - 7582282
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtca-cttgctctgatgcaaacagttcaaaactgcaatctctaaccctt 122  Q
    ||||||||||||| | |||||| |  |||| |||||||||||||||||||||| | |||| |||  ||||||||| | |||| |||||   |||| ||||    
T  7582522 ggggattcaaagaatcctaaccactgcttatttttctgcaaccaaaaacaggtaaacttgttctattgcaaacagatgaaaattgcaaatcctaagcctt 7582423  T
Q  123 ttctcttctattttatatcat-aaactta---aaataagtaattggag-ttgtttagacgaaacgacaatttatatggatacgatactctaattatcact 217  Q
    || ||||     ||||||| | |||||||   ||||||||||| | || |||||| |||||||| |||||  || |||||| ||||||||| ||||||||    
T  7582422 ttatctt-----ttatatcgtcaaacttaccaaaataagtaat-gcagattgtttggacgaaacaacaatccatgtggatatgatactctacttatcact 7582329  T
Q  218 ttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||||||| ||||||||||||||||||| ||  |||||| |||||    
T  7582328 ttattacttggtaaatgatttggtacactttccatatccgaccatca 7582282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 250
Target Start/End: Complemental strand, 17217018 - 17216816
Alignment:
Q  50 cttacttttctgcaaccaaaaacaggtca-cttgctctgatgcaaacagttcaaaactgcaa-tctctaacccttttctcttctattttatatcataaac 147  Q
    ||||||||||| ||||||||| || || | ||||||||| ||||||||| | |||| ||||| | |||||||||||| |||| ||||  ||||||| |||    
T  17217018 cttacttttctacaaccaaaa-catgtaaacttgctctgttgcaaacagataaaaattgcaactttctaacccttttatcttgtatt--atatcatcaac 17216922  T
Q  148 ttaaaa---taagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtaca 244  Q
    ||| ||   |||||||   || |||||| ||||||||||||||  || |||||| ||||||||| ||||||||||||| |||| |||| |||||||||||    
T  17216921 ttacaaatataagtaacgagaattgtttggacgaaacgacaatccatgtggatatgatactctacttatcactttattgcttggtaaacgatttggtaca 17216822  T
Q  245 cttgcc 250  Q
     |||||    
T  17216821 tttgcc 17216816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 92 - 263
Target Start/End: Complemental strand, 11490688 - 11490518
Alignment:
Q  92 aaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttat 191  Q
    |||||| | |||| ||||||||||||| ||   ||||| ||||||||||| | ||  ||||||||||||   || |||||| || ||||| |||||   |    
T  11490688 aaacagataaaaattgcaatctctaacactaa-ctcttttattttatatcgtcaaactaaaataagtaacgcgaattgtttggaagaaactacaatccct 11490590  T
Q  192 atggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatc 263  Q
     |||||||||||||||| |||||||||||||||||| ||||  ||||||||||||| |||||||||| ||||    
T  11490589 gtggatacgatactctacttatcactttattacttgataaacaatttggtacactttcctaatccgaccatc 11490518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 249
Target Start/End: Complemental strand, 13909079 - 13908854
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggt-cacttgctctgatgcaaacagttcaaaactgcaa---tctctaacc 119  Q
    ||||||||||||| | ||||||||  ||||||||| |||||||||||||||||  |||||||||| ||||||||| | |||| |||||   | ||||| |    
T  13909079 ggggattcaaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaagactttctaa-c 13908981  T
Q  120 cttttctcttctattttatatcat-aaactt---aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatca 215  Q
    |||| |       ||||||||| | ||| ||   |||||||||||   || |||||| ||||||||||||||   | |||||||||||||||| ||||||    
T  13908980 ctttac-------ttttatatcgtcaaaattacaaaaataagtaacacgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatca 13908888  T
Q  216 ctttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||| |||| ||||||||||||||||    
T  13908887 ctttattacttggtaaacgatttggtacacttgc 13908854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 167 - 264
Target Start/End: Original strand, 9737521 - 9737623
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaatt-----atcactttattacttgctaaatgatttggtacacttgcctaatccgatca 261  Q
    ||||||||||||||| |||||  || |||||||||||||||| ||     |||||||||||||||| |||| ||||||||||||||||||||||||| ||    
T  9737521 ttgtttagacgaaactacaatccatgtggatacgatactctactttactgatcactttattacttggtaaacgatttggtacacttgcctaatccgacca 9737620  T
Q  262 tca 264  Q
    |||    
T  9737621 tca 9737623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 165 - 256
Target Start/End: Complemental strand, 15047212 - 15047121
Alignment:
Q  165 agttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    ||||||||||||||||||| |||  || | |||||||| ||||| |||||||||||||||||| |||| ||||||| |||||| ||||||||    
T  15047212 agttgtttagacgaaacgaaaatccatgtagatacgatcctctacttatcactttattacttggtaaacgatttggaacactttcctaatcc 15047121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 165 - 256
Target Start/End: Original strand, 15107212 - 15107303
Alignment:
Q  165 agttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    ||||||||||||||||||| |||  || | |||||||| ||||| |||||||||||||||||| |||| ||||||| |||||| ||||||||    
T  15107212 agttgtttagacgaaacgaaaatccatgtagatacgatcctctacttatcactttattacttggtaaacgatttggaacactttcctaatcc 15107303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 9052728 - 9052659
Alignment:
Q  194 ggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||||||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  9052728 ggatacgatactctactta-cattttattacttggtaaatgatttggtacacttgcctaatccgaccatca 9052659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 150 - 248
Target Start/End: Original strand, 19492700 - 19492798
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    |||||||||||   || |||||| || ||||||||||||  | |||||||||||||||| ||||| |||||||||||| |||| |||||||||||||||    
T  19492700 aaaataagtaacgcgaattgtttggatgaaacgacaattcttgtggatacgatactctacttatccctttattacttggtaaacgatttggtacacttg 19492798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 12318481 - 12318424
Alignment:
Q  201 atactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccga 258  Q
    |||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  12318481 atactctacttatcactttattacttggttaatgatttggtacacttgcctaatccga 12318424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 11521192 - 11521288
Alignment:
Q  151 aaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    |||||||||||  || | ||||||| |||||||||||  || || ||||||||||||| |||||||||||||| ||| |||| ||||||||||||||    
T  11521192 aaataagtaatgtgaatagtttagaagaaacgacaatccatgtgtatacgatactctacttatcactttattatttgataaacgatttggtacactt 11521288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 17275896 - 17275833
Alignment:
Q  169 gtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaa 232  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| ||| ||||    
T  17275896 gtttagacgaaacaacaatttctatggatacgatattctaattatcactttattatttggtaaa 17275833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 22526436 - 22526369
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtaca 244  Q
    |||||||||||| || |||||||||||||||| |||||||||||||| ||| |||| |||||||||||    
T  22526436 gaaacgacaattcatgtggatacgatactctacttatcactttattatttgataaacgatttggtaca 22526369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 17709815 - 17709757
Alignment:
Q  191 tatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    ||||||||| |||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  17709815 tatggatacaatactctacttatcactttattacttggtaaacgatttggtacacttgc 17709757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 11700587 - 11700675
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    ||||||| |||||| |||||| | | |||||||||||||||| |||||| ||||||||||| ||||  |||||||||||||| |||||||    
T  11700587 ttgtttaaacgaaaagacaatct-tgtggatacgatactctatttatcattttattacttggtaaacaatttggtacacttgtctaatcc 11700675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 138 - 254
Target Start/End: Complemental strand, 11933529 - 11933414
Alignment:
Q  138 tatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatt 237  Q
    |||||| || |||||||||||||   ||||||||| ||||||||||||||  || |||  ||||||||| | ||||||||| |||||||| |||| ||||    
T  11933529 tatcatcaaattaaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggtcacgatactc-acttatcacttcattacttggtaaacgatt 11933431  T
Q  238 tggtacacttgcctaat 254  Q
     || |||||||||||||    
T  11933430 aggaacacttgcctaat 11933414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 20829782 - 20829845
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    ||||||| |||||| | |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  20829782 tggatacaatactc-agttatcactttattacttggtaaacgatttggtacacttgcctaatccg 20829845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 20315082 - 20314991
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccga 258  Q
    |||||| ||||||||||||||   | |||||| |||| |||| |||||| ||||||||||| |||| |||||||||||||||| | ||||||    
T  20315082 ttgtttggacgaaacgacaatccttgtggatatgatattctacttatcaatttattacttggtaaacgatttggtacacttgcatgatccga 20314991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 13992893 - 13992983
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    |||||| ||| |||||| |||  || |||||||||||||||| ||| |||||||||||||| ||||  ||||||||||||| ||| |||||    
T  13992893 ttgtttggacaaaacgaaaatccatgtggatacgatactctacttaccactttattacttggtaaacaatttggtacacttacctcatccg 13992983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 264
Target Start/End: Original strand, 25121243 - 25121339
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||| |||||||| |||||   | ||||||||||||| || ||| |||||||||||||| |||| ||||||| |||||| |||||||||| |||||    
T  25121243 ttgtttggacgaaaccacaatccttgtggatacgatactatactta-cactttattacttggtaaacgatttggaacactttcctaatccgaccatca 25121339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 24639471 - 24639550
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    |||||| ||| |||||| |||  || |||||||||||||||| |||||||||||||||||| | ||||||||| |||||||    
T  24639471 ttgtttggacaaaacgaaaatccatgtggatacgatactctacttatcactttattacttggt-aatgatttgatacactt 24639550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 26115902 - 26116001
Alignment:
Q  148 ttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    |||||||||||||   || |||||| || ||| |||||||   ||||||||||||||| |||||| ||| |||||||||| |||| ||||||||||||||    
T  26115902 ttaaaataagtaaaacgaattgtttggaagaatcgacaatccttatggatacgatactttaatta-cacgttattacttgataaacgatttggtacactt 26116000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 43941810 - 43941880
Alignment:
Q  173 agacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtac 243  Q
    ||||||||| ||||| ||| |||||| |||||  || |||||||||||||||||| ||||| |||||||||    
T  43941810 agacgaaacaacaatctatgtggataggataccttacttatcactttattacttgataaataatttggtac 43941880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 19374830 - 19374909
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    |||||| ||| |||||||||| |   |||||||||||||||| ||| || ||||||||||| |||| ||||||||||||||    
T  19374830 ttgtttggacaaaacgacaatctcagtggatacgatactctactta-cattttattacttgataaacgatttggtacactt 19374909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 19636546 - 19636682
Alignment:
Q  109 aatctctaacccttttctcttctattttata-tcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactct 207  Q
    ||||||||||||||  ||||| ||||||||  |||  ||||||||||||||||   || |||||| || |||||||||||   ||| ||||| |||||||    
T  19636546 aatctctaacccttaactcttttattttatcgtca--aacttaaaataagtaacatgaattgtttggatgaaacgacaatccctatagatacaatactct 19636643  T
Q  208 aattatcactttattacttgctaaatgatttggtacactt 247  Q
    | ||| |||||||||||||  | || ||||||||||||||    
T  19636644 acttaccactttattactttgt-aacgatttggtacactt 19636682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 24639336 - 24639408
Alignment:
Q  25 gggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggt-cacttgctctgatgcaaaca 96  Q
    |||||||||||| | |||||| |  ||||||||||||||||| |||||||||  |||||||||| ||||||||    
T  24639336 gggattcaaagaatcctaaccactgcttacttttctgcaaccgaaaacaggtaaacttgctctgttgcaaaca 24639408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 40227880 - 40227770
Alignment:
Q  144 aaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtac 243  Q
    ||||| |||||||||||   || |||||| || ||||| ||||||  ||||||||| ||| |  | |||||||||||||||||| |||  ||||||||||    
T  40227880 aaactaaaaataagtaacgcgaattgtttggatgaaactacaattcctatggatacaatatta-acttatcactttattacttggtaac-gatttggtac 40227783  T
Q  244 acttgcctaatcc 256  Q
    |||||||||||||    
T  40227782 acttgcctaatcc 40227770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 15050146 - 15050185
Alignment:
Q  214 cactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  15050146 cactttattacttggtaaatgatttgatacacttgcctaa 15050185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 15104278 - 15104239
Alignment:
Q  214 cactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  15104278 cactttattacttggtaaatgatttgatacacttgcctaa 15104239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 17026218 - 17026305
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggt-cacttgctctgatgcaaacagttcaaaactgcaa 110  Q
    |||||||| |||| | ||||||||  ||||||| |||||||||||||||||||  | || ||||| ||||||||| | ||||||||||    
T  17026218 ggggattcgaagaatcctaaccgctgcttacttgtctgcaaccaaaaacaggtaaatttactctgttgcaaacagataaaaactgcaa 17026305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 3774890 - 3774809
Alignment:
Q  183 acaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatcac 265  Q
    |||||| || |||||| ||||||||| ||  |||||||||||||  ||||  ||||| |||||||||||||||||| ||||||    
T  3774890 acaattcatgtggatatgatactctacttg-cactttattacttagtaaacaatttgatacacttgcctaatccgaccatcac 3774809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 264
Target Start/End: Original strand, 16730399 - 16730513
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   ||||||||| |||||||||| |||   | |||||||||||||||| |||||||||| || |||  |||  ||||| |||||| |||    
T  16730399 aaaataagtaacgcgagttgtttggacgaaacgaaaatccttttggatacgatactctacttatcactttctttcttcgtaagcgatttagtacacatgc 16730498  T
Q  250 ctaatccgatcatca 264  Q
    |  |||||| |||||    
T  16730499 catatccgaccatca 16730513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 19900649 - 19900576
Alignment:
Q  179 aacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    ||||||||| | | || ||| ||||||||| ||| |||||||||||||| ||||  |||||||||||||||||||    
T  19900649 aacgacaatctttgtgaatatgatactctactta-cactttattacttggtaaacaatttggtacacttgcctaa 19900576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 15164849 - 15164768
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    |||||| ||||||| ||||||   | |||||||||||||||  |||| | || |||||||| |||| |||||||||||||||    
T  15164849 ttgtttggacgaaatgacaatccctgtggatacgatactctgcttattaattgattacttggtaaacgatttggtacacttg 15164768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 19492586 - 19492635
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaaca 73  Q
    |||||||| |||| | ||||||||  ||||||||||||||||||||||||    
T  19492586 ggggattcgaagaatcctaaccgccgcttacttttctgcaaccaaaaaca 19492635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 25121101 - 25121173
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacag 97  Q
    |||||||| |||| | ||||||||  ||||||||||||||| | ||||| ||| |||||||||| |||||||||    
T  25121101 ggggattcgaagaatcctaaccgctgcttacttttctgcaatc-aaaacgggtaacttgctctgttgcaaacag 25121173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 254
Target Start/End: Original strand, 8969722 - 8969825
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| |||||||||||||| |   | |||||| | ||||| ||| |||||||||||||  ||||| ||||||||||||||     
T  8969722 aaaataagtaacacgaattgtttggacgaaacgacaatctcagtagatacgttgctctactta-cactttattactttgtaaataatttggtacacttgt 8969820  T
Q  250 ctaat 254  Q
    |||||    
T  8969821 ctaat 8969825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 261
Target Start/End: Original strand, 12839823 - 12839891
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatca 261  Q
    ||||||||||||||||  ||||| ||||||| ||| |||  ||||| |||||||| |||||||| ||||    
T  12839823 tggatacgatactctacctatcattttattaattggtaagcgattttgtacactttcctaatccaatca 12839891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 13587271 - 13587231
Alignment:
Q  209 attatcactttattacttgctaaatgatttggtacacttgc 249  Q
    ||||||||||||||| ||| |||| ||||||||||||||||    
T  13587271 attatcactttattatttggtaaacgatttggtacacttgc 13587231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 15164974 - 15164891
Alignment:
Q  40 ctaaccgcaacttacttttctgcaaccaaaaacaggt-cacttgctctgatgcaaacagttcaaaactgcaa-tctctaaccctt 122  Q
    |||||| | |||||||||||||||||| |||||||||  |||||||||| ||||||||  | |||| ||||| ||||||||||||    
T  15164974 ctaacctccacttacttttctgcaacc-aaaacaggtaaacttgctctgttgcaaacaaataaaaattgcaactctctaaccctt 15164891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 24 - 264
Target Start/End: Original strand, 168173 - 168412
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||||||||||| |||||||    || ||||||| |||||||||||| || |||||||||| ||||||||| | |||| || ||||||||||||||     
T  168173 ggggattcaaagagtcctaaccgttgtttccttttctacaaccaaaaacaagtaacttgctctgttgcaaacagataaaaattgaaatctctaaccctta 168272  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
    | |||| ||||||||||| | ||||||||||||||||   ||| | |||||| |||||||||| |  | |||||||||||||||| ||||||||||||||    
T  168273 tgtcttttattttatatcgtcaacttaaaataagtaacacgagctatttagaagaaacgacaa-tcctgtggatacgatactctacttatcactttatta 168371  T
Q  224 cttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||| |||| |||||||||||||||||||||| || |||||    
T  168372 cttggtaaacgatttggtacacttgcctaatctgaccatca 168412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 7e-50; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 24 - 264
Target Start/End: Original strand, 25182302 - 25182542
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||||||||||| |||||| |   || ||||||||||||||||||||||| |||||||||| |||||| || | |||| |||||||||||||||||     
T  25182302 ggggattcaaagagtcctaaccactgtttccttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctaaccctta 25182401  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
    |||||| ||||||||||| | ||||||||||||||||    ||  |||||||||||| ||||||  || || ||||||||||||| || |||||||||||    
T  25182402 tctcttttattttatatcgtcaacttaaaataagtaacgcaagcagtttagacgaaatgacaatccatgtgaatacgatactctacttgtcactttatta 25182501  T
Q  224 cttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
     ||| ||||| ||||||| |||||| ||||||||| |||||    
T  25182502 tttggtaaataatttggtccacttgtctaatccgaccatca 25182542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 50 - 258
Target Start/End: Complemental strand, 14528347 - 14528140
Alignment:
Q  50 cttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaactt 149  Q
    ||||||||||||||||||||  ||||| ||||||| || ||||||||| | |||| |||||||||||||||||  || || ||||||||||| | |  ||    
T  14528347 cttacttttctgcaaccaaac-caggtaacttgctttgttgcaaacagctaaaaattgcaatctctaacccttaactattttattttatatcgtcagttt 14528249  T
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   ||||||||| |||||||||||||| ||| ||||||||||||||||  ||||||||||||||||| |||| ||||||| ||||||||    
T  14528248 aaaataagtaacgtgagttgtttggacgaaacgacaatctatgtggatacgatactctacgtatcactttattacttggtaaacgatttggcacacttgc 14528149  T
Q  250 ctaatccga 258  Q
    |||||||||    
T  14528148 ctaatccga 14528140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 54 - 264
Target Start/End: Complemental strand, 19786926 - 19786716
Alignment:
Q  54 cttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaa 153  Q
    ||||||| ||| |||||||| || |||||||||| ||||||||| | |||| | |||||||||||  || |||||| ||||||||||||| |||||||||    
T  19786926 cttttctacaatcaaaaacatgtaacttgctctgttgcaaacagataaaaattacaatctctaacttttatctcttttattttatatcatcaacttaaaa 19786827  T
Q  154 taagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
     ||||||   ||||||||| |||||||||||| |   |||||||| |||||| || || ||||||||||||||| |||| ||||||||| ||||| ||||    
T  19786826 caagtaacacgagttgtttggacgaaacgacagtccctatggatatgatactttacttgtcactttattacttggtaaacgatttggtatacttgtctaa 19786727  T
Q  254 tccgatcatca 264  Q
    ||||| |||||    
T  19786726 tccgaccatca 19786716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 24 - 264
Target Start/End: Complemental strand, 34497340 - 34497100
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    |||||||||| || | ||||||||  ||||||||||||||| ||||  ||||| || |||| || |||||| || | |||| ||||||||||||||||||    
T  34497340 ggggattcaaggaatcctaaccgctgcttacttttctgcaagcaaac-caggtaacatgctatgttgcaaaaagataaaaattgcaatctctaacccttt 34497242  T
Q  124 t-ctcttctattttatatcataaacttaaaataagtaat-tggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttat 221  Q
      ||||| ||||||||||| | || |||||||||||||  |||| |||||| |||||||||||| | | |||||||||||||||||| | ||||||||||    
T  34497241 aactcttttattttatatcgtcaatttaaaataagtaacgtgga-ttgtttggacgaaacgacagtctctatggatacgatactctactaatcactttat 34497143  T
Q  222 tacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||| |||| |||||| || |||||||||||| || |||||    
T  34497142 tacttggtaaacgatttgatagacttgcctaatctgaccatca 34497100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 24 - 265
Target Start/End: Complemental strand, 13698078 - 13697846
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    |||||||||||||||  ||| | |  ||||||||||||||||||||  ||||| |||||||||| |||||| || | |||| |||||||||||||||||     
T  13698078 ggggattcaaagagtcataatcactgcttacttttctgcaaccaaa--caggtaacttgctctgttgcaaagagataaaaattgcaatctctaaccctta 13697981  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
    |||||| ||||||||||| | ||||||||||||||||     ||||||| |||||||||| |||   | |||||||||||||||       |||||||||    
T  13697980 tctcttgtattttatatcgtcaacttaaaataagtaacgcaggttgtttggacgaaacgaaaatccttgtggatacgatactct-------actttatta 13697888  T
Q  224 cttgctaaatgatttggtacacttgcctaatccgatcatcac 265  Q
     ||| |||| ||||||||||||||||||||| ||| ||||||    
T  13697887 attggtaaacgatttggtacacttgcctaattcgaccatcac 13697846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 50 - 247
Target Start/End: Original strand, 18448442 - 18448639
Alignment:
Q  50 cttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa---tctctaacccttttctcttctattttatatcataaa 146  Q
    ||||||||| ||||||||||||||||| |||||||||| ||||||||| | ||||||||||   | ||||||| |||       | ||||||||| | ||    
T  18448442 cttacttttatgcaaccaaaaacaggtaacttgctctgttgcaaacagataaaaactgcaagactttctaaccattta------tcttttatatcgtcaa 18448535  T
Q  147 ctta---aaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtac 243  Q
    ||||   ||||||||||   || |||||| ||| |||||||||| | ||| |||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  18448536 cttataaaaataagtaacgagaattgtttggacaaaacgacaatctctattgatacgatgctctaattattactttattacttggtaaatgatttggtac 18448635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 151 - 258
Target Start/End: Complemental strand, 17976717 - 17976610
Alignment:
Q  151 aaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    |||||||||||  ||  ||| |||||||||||| ||| | | |||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||    
T  17976717 aaataagtaatgcgaaatgtgtagacgaaacgaaaatctttgtggatacgatactctacttatcactttattacttgataaatgatttggcacacttgcc 17976618  T
Q  251 taatccga 258  Q
    ||||||||    
T  17976617 taatccga 17976610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 151 - 252
Target Start/End: Complemental strand, 24904731 - 24904630
Alignment:
Q  151 aaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    |||||||||||  || |||||||||||||||||||||   | |||||| ||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  24904731 aaataagtaatgtgaattgtttagacgaaacgacaatcactgtggatatgatactctacttatcactttattatttggtaaatgatttggtacacttgcc 24904632  T
Q  251 ta 252  Q
    ||    
T  24904631 ta 24904630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 232
Target Start/End: Complemental strand, 2637699 - 2637615
Alignment:
Q  148 ttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaa 232  Q
    |||||||||||||  |||||||||||||||||||||||||  || |||||||||||||||| |||||||||||||||||| ||||    
T  2637699 ttaaaataagtaacgggagttgtttagacgaaacgacaatccatgtggatacgatactctacttatcactttattacttgataaa 2637615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 177 - 264
Target Start/End: Complemental strand, 5851013 - 5850926
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||||||||||| ||| |||||||||||||||| |||||||||||||||||| |||| |||| |||||||||| ||||||||| |||||    
T  5851013 gaaacgacaatctatgtggatacgatactctacttatcactttattacttggtaaacgattaggtacacttgactaatccgaccatca 5850926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 29382378 - 29382467
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    |||||| || |||||||||||   | |||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  29382378 ttgtttggatgaaacgacaatccctgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaatcc 29382467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 258
Target Start/End: Complemental strand, 6885155 - 6884949
Alignment:
Q  51 ttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa-tctctaa-cccttttctcttctattttata-tcataaac 147  Q
    |||| ||||||||||||||||||||| |||| ||||  | ||||||| | |||| ||||| ||||||| ||||| |||||| ||||||||  |||  |||    
T  6885155 ttacatttctgcaaccaaaaacaggtaacttactctattacaaacagataaaaattgcaaatctctaaacccttatctctt-tattttatcgtca--aac 6885059  T
Q  148 ttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    ||||||||||||     |||||||| ||||||||||||||  || | |||||||||||| | |||||||||||||||| | || | ||||| ||||||||    
T  6885058 ttaaaataagtagcgcaagttgtttggacgaaacgacaatccatgtagatacgatactc-acttatcactttattactgggtacacgatttagtacactt 6884960  T
Q  248 gcctaatccga 258  Q
    |||||||||||    
T  6884959 gcctaatccga 6884949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 264
Target Start/End: Original strand, 30806443 - 30806611
Alignment:
Q  101 aaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaat--ttata---tgg 195  Q
    |||| |||||||||||||||||  ||||| ||||||||||| | ||  ||||||||||||    | |||||| || |||||||||||  || |    |||    
T  30806443 aaaattgcaatctctaacccttaactcttttattttatatcgtcaaactaaaataagtaacgcaaattgtttggatgaaacgacaatccttgtggactgg 30806542  T
Q  196 atacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||||||||||||| |||||||||||||||||  |||| |||||| |||||||||||||||||| |||||    
T  30806543 atacgatactctacttatcactttattacttaataaacgatttgatacacttgcctaatccgaccatca 30806611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 264
Target Start/End: Complemental strand, 15238881 - 15238784
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||||||||||||||||||| || ||||||||||| |||| |||||| ||| ||||||| ||||  ||||| |||||||||||||| ||| |||||    
T  15238881 ttgtttagacgaaacgacaattcatgtggatacgataatctacttatcattttcttacttggtaaacaatttgatacacttgcctaattcgaccatca 15238784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 255
Target Start/End: Complemental strand, 24269696 - 24269592
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    ||||||| ||||  || |||||| ||||||||||||||   | |||||||||||||||| ||| |||||||||||||| ||||| |||||||||||||||    
T  24269696 aaaataaataatgtgaattgtttggacgaaacgacaatccctgtggatacgatactctactta-cactttattacttggtaaataatttggtacacttgc 24269598  T
Q  250 ctaatc 255  Q
    ||||||    
T  24269597 ctaatc 24269592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 165 - 257
Target Start/End: Original strand, 24114297 - 24114389
Alignment:
Q  165 agttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    |||||||| ||||||||||||||   |  ||||||||||||||| |||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  24114297 agttgtttggacgaaacgacaatccctgcggatacgatactctacttatcattttattacttggtaaacaatttggtacacttgcctaatccg 24114389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 265
Target Start/End: Original strand, 17101910 - 17102008
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatcac 265  Q
    |||||| || |||||||||||   |||||||||||||||||| |||||||||||||||||| |||| |||||| ||||||| ||  |||||| ||||||    
T  17101910 ttgtttggatgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaacgatttgatacactttccatatccgaccatcac 17102008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 26008077 - 26008019
Alignment:
Q  195 gatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    ||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  26008077 gataccatactctacttatcactttattacttggtaaatgatttggtacacttgcctaa 26008019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 13314991 - 13315098
Alignment:
Q  149 taaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    ||||||||||||   || |||||| |||||||| | |||  || ||||||||||||| || |||||||||||||||||| |||||||| ||||||||||     
T  13314991 taaaataagtaacgcgaattgtttggacgaaacaaaaatccatgtggatacgatactatacttatcactttattacttggtaaatgatctggtacactt- 13315089  T
Q  249 cctaatccg 257  Q
    |||||||||    
T  13315090 cctaatccg 13315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 24110698 - 24110762
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||||| |||||||    
T  24110698 tggatacgatactctacttatcattttattacttggtaaatgatttgatacacttgcataatccg 24110762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 151 - 258
Target Start/End: Original strand, 30122156 - 30122262
Alignment:
Q  151 aaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    |||||||||||  || |||||| ||| ||| ||||||  || |||||| ||||||||| ||| ||||||||||||||  || ||||||||||||||||||    
T  30122156 aaataagtaatgcgaattgtttggacaaaatgacaatccatgtggatatgatactctactta-cactttattacttggaaagtgatttggtacacttgcc 30122254  T
Q  251 taatccga 258  Q
    ||||||||    
T  30122255 taatccga 30122262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 30783772 - 30783835
Alignment:
Q  181 cgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtaca 244  Q
    ||||||| ||| |||||||||||||||| |||||||||||||||||| |||| |||||||||||    
T  30783772 cgacaatctatgtggatacgatactctacttatcactttattacttggtaaacgatttggtaca 30783835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 264
Target Start/End: Original strand, 28276753 - 28276871
Alignment:
Q  145 aacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtaca 244  Q
    ||||| ||||||||||  |||||| ||| ||| |||| | |||   |||||||||||||||| | |||||||||| ||| ||| |||| |||||| ||||    
T  28276753 aacttcaaataagtaagaggagttatttggacaaaactataatccctatggatacgatactc-acttatcacttttttatttggtaaacgatttgataca 28276851  T
Q  245 cttgcctaatccgatcatca 264  Q
    |||||||||||||| |||||    
T  28276852 cttgcctaatccgaccatca 28276871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 265
Target Start/End: Original strand, 5052939 - 5053036
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatcac 265  Q
    ||||||||||| ||| | |||| || ||||||| |||||||| ||| |||||||||||  | |||| |||||||||||||||||||||| || ||||||    
T  5052939 ttgtttagacgcaacaa-aattcatgtggatacaatactctacttagcactttattacccggtaaacgatttggtacacttgcctaatctgaccatcac 5053036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 14075666 - 14075590
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||||||||  || ||||||||||| |||| |||||||||| ||||||| |||| ||||||||||| || |||||    
T  14075666 gaaacgacaatccatgtggatacgatagtctacttatcactttcttacttggtaaaagatttggtacaatttcctaa 14075590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 17969468 - 17969413
Alignment:
Q  195 gatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    ||||||||||| || |||||||||||||||||| ||||||||| || |||||||||    
T  17969468 gatacgatactatatttatcactttattacttgataaatgattcggcacacttgcc 17969413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 26615269 - 26615339
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||| ||| | || |||||| ||||||||    
T  26615269 gaaacgacaattcatatggatacaatactctacttatcactttattagttggt-aacgatttgatacacttg 26615339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 30235416 - 30235361
Alignment:
Q  210 ttatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatcac 265  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||||| | ||||||    
T  30235416 ttatcactttattacttggtaaacgattttgtacacttgcctaatccaaccatcac 30235361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 265
Target Start/End: Complemental strand, 31288415 - 31288341
Alignment:
Q  191 tatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcct-aatccgatcatcac 265  Q
    ||||||||||||||| || ||| |||||||||||||| |||| |||||||||||||| ||| ||||||| ||||||    
T  31288415 tatggatacgatactttactta-cactttattacttggtaaacgatttggtacactttcctaaatccgaccatcac 31288341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 44010915 - 44010990
Alignment:
Q  41 taaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctcta 116  Q
    ||||||| ||||||| ||||||||||||||||| || ||||| |||| ||||||||  | |||| |||||||||||    
T  44010915 taaccgctacttactcttctgcaaccaaaaacatgtaacttgttctgttgcaaacatataaaaattgcaatctcta 44010990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 24269821 - 24269748
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacag 97  Q
    |||||||| |||| | ||||||||  ||||||||||||||||||||||||||| |  | ||||| |||||||||    
T  24269821 ggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaactactctgttgcaaacag 24269748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 44011048 - 44011116
Alignment:
Q  174 gacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtac 243  Q
    ||||||||||||||  || |||||||||||||||| ||| |||||||||||||  |||| ||||||||||    
T  44011048 gacgaaacgacaatccatgtggatacgatactctactta-cactttattacttcgtaaacgatttggtac 44011116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 25226189 - 25226137
Alignment:
Q  196 atacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    ||||||||||| | |||||||||||||||||| |||| ||||| |||||||||    
T  25226189 atacgatactcaacttatcactttattacttgataaacgatttagtacacttg 25226137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 14628450 - 14628371
Alignment:
Q  175 acgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaat 254  Q
    ||||||||||||| | |  |||||| ||| | || ||||||  |||||||||| |||||||||||||| |||||||||||    
T  14628450 acgaaacgacaatatctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 14628371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 24644893 - 24644823
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||||||| |||||||| ||| |||||||||||||| ||||| |||||| |||||||| ||||| || |||||    
T  24644893 tggatacaatactctactta-cactttattacttggtaaataatttggcacacttgcataatctgaccatca 24644823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 12268266 - 12268193
Alignment:
Q  179 aacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    ||||||||||  |||  ||||||||||||  ||| |||||||||||||| ||||| ||||||| |||||||||||    
T  12268266 aacgacaattcttataaatacgatactctgttta-cactttattacttgataaattatttggtgcacttgcctaa 12268193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 14006161 - 14006091
Alignment:
Q  183 acaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||| || || ||| ||||||||| |||||| ||||||||||| |||||||| || ||||||| |||||    
T  14006161 acaattcatgtgaatatgatactctacttatcattttattacttggtaaatgatatgatacacttacctaa 14006091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 27659526 - 27659468
Alignment:
Q  168 tgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattactt 226  Q
    ||||| ||||||||||||||   | | |||||||||||||| |||||||||||||||||    
T  27659526 tgtttggacgaaacgacaatccttgtagatacgatactctacttatcactttattactt 27659468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 17509345 - 17509268
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttg 227  Q
    |||||||||||   || |||||| |||||||  |||||  || |||||| ||||||||| ||||||||||||||||||    
T  17509345 aaaataagtaaagagaattgtttggacgaaagaacaatccatgtggatatgatactctacttatcactttattacttg 17509268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 24723484 - 24723540
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    ||||||||||||| || |||||||||||||||||| | ||||| ||||||||| ||||    
T  24723484 tggatacgatactttacttatcactttattacttggtgaatga-ttggtacacatgcc 24723540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 29382261 - 29382322
Alignment:
Q  50 cttacttttctgcaaccaaaaacaggt-cacttgctctgatgcaaacagttcaaaactgcaa 110  Q
    |||||||||||||||||||||| |||| |||||||| || ||||||||| | |||| |||||    
T  29382261 cttacttttctgcaaccaaaaataggtacacttgctatgttgcaaacagataaaaattgcaa 29382322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 17972225 - 17972171
Alignment:
Q  194 ggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    ||||||||||||||| ||| |||||||||||||| ||| ||||||||||| ||||||    
T  17972225 ggatacgatactctactta-cactttattacttgataa-tgatttggtacgcttgcc 17972171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 24 - 257
Target Start/End: Complemental strand, 39809 - 39576
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    |||||||||||||||  |||||||  ||||||||||||||||||||| ||||| |||||||||| ||||||||| | |||| ||||||||||||  |||     
T  39809 ggggattcaaagagtcataaccgctgcttacttttctgcaaccaaaa-caggtaacttgctctgttgcaaacagataaaaattgcaatctctaattctta 39711  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggag-ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatt 222  Q
    |||||| ||||||||||| | ||||||||||||||||   ||| || ||| ||| |||| |||||  || |||||||||| ||||| |||||||||||||    
T  39710 tctcttttattttatatcgtcaacttaaaataagtaaagtgagtttttttggacaaaacaacaatcaatgtggatacgatgctctacttatcactttatt 39611  T
Q  223 acttgctaaatgatttggtacacttgcctaatccg 257  Q
    ||||| ||||| |||| ||||||||||||||||||    
T  39610 acttggtaaataattttgtacacttgcctaatccg 39576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 2e-47; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 264
Target Start/End: Original strand, 28933535 - 28933774
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||||||||||| ||||||||   || ||||| ||||||||| |||| || |||||||||| ||||||||| | |||| |||||||||||||||||     
T  28933535 ggggattcaaagagtcctaaccgctgtttcctttt-tgcaaccaagaacaagtaacttgctctgttgcaaacagataaaaattgcaatctctaaccctta 28933633  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
    |||||| ||||||||||||| ||||||||||||| ||    | |||||| |||||||||| |||   | |||||||||||||||| ||||||||||||||    
T  28933634 tctcttttattttatatcatcaacttaaaataagcaacacaaattgtttggacgaaacgataatccttgtggatacgatactctacttatcactttatta 28933733  T
Q  224 cttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
     ||||||||  || |||||||||| |||||||||| |||||    
T  28933734 tttgctaaacaatatggtacactttcctaatccgaccatca 28933774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 24 - 265
Target Start/End: Complemental strand, 21907659 - 21907416
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaact--gcaatctctaaccct 121  Q
    |||||||||||||||  |||||||   || ||||| |||||||||||| || | |||||||||| ||||||||| | |||| |  | ||| |||||||||    
T  21907659 ggggattcaaagagtcgtaaccgctgtttccttttttgcaaccaaaaatagctaacttgctctgttgcaaacagataaaaattatgtaatttctaaccct 21907560  T
Q  122 tttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttat 221  Q
    | |||||| ||||||||||||| |||||||| |||||||   || || ||| ||||||||||||||   | ||||||||||||| || ||||||||||||    
T  21907559 tatctcttttattttatatcatcaacttaaattaagtaacgcgacttttttggacgaaacgacaatccttgtggatacgatactttacttatcactttat 21907460  T
Q  222 tacttgctaaatgatttggtacacttgcctaatccgatcatcac 265  Q
    |||||| |||| ||||||||| ||||||||||||||| ||||||    
T  21907459 tacttggtaaacgatttggtatacttgcctaatccgaccatcac 21907416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 4 - 257
Target Start/End: Original strand, 12183185 - 12183438
Alignment:
Q  4 atgtcgaagaatatatatatggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaa 103  Q
    ||||| || |||||| ||| |||||||| |||| | |||||||   |||||||||||| |||||||| ||||| ||||||| || ||||||||| | ||     
T  12183185 atgtccaacaatataaatagggggattcgaagaatcctaaccgttgcttacttttctgtaaccaaaa-caggtaacttgctatgttgcaaacagataaac 12183283  T
Q  104 actgcaatctctaaccctttt-ctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgat 202  Q
    | |||||||||||||| ||   ||||| ||||||||||| | | ||||||||||||||   || |||||  ||||||| ||||||  || ||||||||||    
T  12183284 attgcaatctctaacctttaaactcttttattttatatcgtcaccttaaaataagtaacgtgaattgttaggacgaaatgacaatccatgtggatacgat 12183383  T
Q  203 actctaattatcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    ||| || |||||||||||||||||| |||| |||||||||||||||| |||||||    
T  12183384 actgtacttatcactttattacttggtaaacgatttggtacacttgcataatccg 12183438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 24 - 264
Target Start/End: Complemental strand, 11177175 - 11176935
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||| ||||||| ||||||||   || ||||| || ||| |||||||||| ||||||| || |||||||   | |||| |||||| ||||||||||     
T  11177175 ggggatttaaagagtcctaaccgctgtttccttttatgtaacaaaaaacaggtaacttgctatgttgcaaacttataaaaattgcaatttctaaccctta 11177076  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
    |||||| ||||||||||| | || |||||||||||||   || || ||| || ||||||||||   || |||||||||||||||| ||||||||||| ||    
T  11177075 tctcttttattttatatcgtcaatttaaaataagtaacacgaattatttcgaagaaacgacaacccatgtggatacgatactctacttatcactttagta 11176976  T
Q  224 cttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    || | |||| |||| |||||||||||||||||||| |||||    
T  11176975 ctcggtaaacgattgggtacacttgcctaatccgaccatca 11176935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 28 - 265
Target Start/End: Complemental strand, 19244794 - 19244569
Alignment:
Q  28 attcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaac-tgcaatctctaacccttttct 126  Q
    ||||||||| | || ||| | |||||||||||| ||||||||  ||||| |||||||||| ||||||||||||||||  ||||||||||||||||  |||    
T  19244794 attcaaagaatccttaccactacttacttttctacaaccaaac-caggtaacttgctctgttgcaaacagttcaaaaagtgcaatctctaaccctcatct 19244696  T
Q  127 cttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattactt 226  Q
    ||| ||||||||||||| ||||||||||            |||||| |||||||||||||| | ||| ||| |||||||||| |||||||||||||||||    
T  19244695 cttttattttatatcatcaacttaaaat------------ttgtttggacgaaacgacaatctctatagattcgatactctacttatcactttattactt 19244608  T
Q  227 gctaaatgatttggtacacttgcctaatccgatcatcac 265  Q
    | |||| ||| | ||| |||||||||||| || ||||||    
T  19244607 ggtaaacgatctagtaaacttgcctaatctgaccatcac 19244569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 258
Target Start/End: Complemental strand, 8241497 - 8241268
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||||||| ||| ||||| ||  ||||||||||| ||||||||  ||||| ||||||| || ||||||||| | |||| ||||||||||||| |||     
T  8241497 ggggattcaaaaagt-ctaactgctgcttacttttctacaaccaaa--caggtaacttgctatgttgcaaacagataaaaattgcaatctctaactctta 8241401  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
     ||||| ||||||||||| | ||  |||||||||||||  || |||||| ||| ||||| |||  | | |||||||||||||||| |||||||||| |||    
T  8241400 actcttttattttatatcgtgaaactaaaataagtaatgtgaattgtttggacaaaacg-caacct-tgtggatacgatactctacttatcactttctta 8241303  T
Q  224 cttgctaaatgatttggtacacttgcctaatccga 258  Q
    |||  |||| |||||||||||||||||||||||||    
T  8241302 cttcgtaaacgatttggtacacttgcctaatccga 8241268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 33 - 257
Target Start/End: Complemental strand, 15466584 - 15466362
Alignment:
Q  33 aagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttcta 132  Q
    |||||||||||||||   ||||||||||||||||||| |  ||| |||||||||| ||||||||| | |||  |||||||||||||||||  ||||| ||    
T  15466584 aagagttctaaccgctgtttacttttctgcaaccaaata--ggtaacttgctctgttgcaaacagataaaatttgcaatctctaacccttaactctttta 15466487  T
Q  133 tt-ttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaa 231  Q
    || ||||||| | ||   ||||||| |||   || |||||||||||||| ||||||   ||| ||||||||||||||  || |||||||||||||| |||    
T  15466486 ttattatatcgttaaaacaaaataactaacgcgaattgtttagacgaaatgacaatccctattgatacgatactctacgta-cactttattacttggtaa 15466388  T
Q  232 atgatttggtacacttgcctaatccg 257  Q
    | ||||||||||||||||||||||||    
T  15466387 acgatttggtacacttgcctaatccg 15466362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 50 - 264
Target Start/End: Complemental strand, 22568037 - 22567825
Alignment:
Q  50 cttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaactt 149  Q
    ||||||||||||||||||||   |||| |||  ||||| ||||||||| | |||| | |||||||||||||||  | ||| ||||||||||| | |||||    
T  22568037 cttacttttctgcaaccaaact-aggtaactgactctgttgcaaacagat-aaaattacaatctctaacccttaacccttttattttatatcgttaactt 22567940  T
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   ||||||||| |||||||| |||||  || ||||||| ||||| || || |||| |||||||||| ||||  |||||||||||||||    
T  22567939 aaaataagtaacgtgagttgtttggacgaaaccacaatccatgtggatacaatactatacttttcacgttattacttggtaaacaatttggtacacttgc 22567840  T
Q  250 ctaatccgatcatca 264  Q
    ||||||||| |||||    
T  22567839 ctaatccgaccatca 22567825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 51 - 256
Target Start/End: Complemental strand, 4339932 - 4339728
Alignment:
Q  51 ttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaactta 150  Q
    |||||||||||||||||||| ||||| |||||||  | ||||||||  | || | || |||||||||||||| |||||| ||||||||||| | ||  ||    
T  4339932 ttacttttctgcaaccaaaa-caggtaacttgcttagttgcaaacaaataaatattgtaatctctaacccttatctcttttattttatatcgtcaaacta 4339834  T
Q  151 aaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    |||||||||||  || ||| || ||| ||||||||||   | ||||||| |||||||| |||||||||||||| ||| ||||  |||||||||||||| |    
T  4339833 aaataagtaatgcgaattggttggacaaaacgacaatcattgtggatacaatactctacttatcactttattatttgataaacaatttggtacacttgtc 4339734  T
Q  251 taatcc 256  Q
    ||||||    
T  4339733 taatcc 4339728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 167 - 264
Target Start/End: Complemental strand, 9726104 - 9726007
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||| ||||||||||||||  || |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  9726104 ttgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaatccgaccatca 9726007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 213
Target Start/End: Original strand, 6630554 - 6630755
Alignment:
Q  13 aatatatatatggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagt-tcaaaactgcaat 111  Q
    |||||| ||| ||| ||||||||||| |||||||| | || | ||| ||||||||||||||||| |||||||||| |||||| |   | |||| ||||||    
T  6630554 aatataaataggggtattcaaagagtcctaaccgctatttccatttttgcaaccaaaaacaggtaacttgctctgttgcaaaaaaaataaaaattgcaat 6630653  T
Q  112 ctctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaatt 211  Q
    |||||||| || | |||| ||||||||||  | ||||||||||||||||    ||  ||||||||||||||||||| ||| ||||| |||||||||| ||    
T  6630654 ctctaacctttatatcttttattttatattgtcaacttaaaataagtaacgcaagcggtttagacgaaacgacaatctatgtggatccgatactctactt 6630753  T
Q  212 at 213  Q
    ||    
T  6630754 at 6630755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 17729232 - 17729144
Alignment:
Q  169 gtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    |||| |||||||||||||| | | |||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||||    
T  17729232 gtttggacgaaacgacaatctttgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttacctaatccg 17729144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 50 - 225
Target Start/End: Complemental strand, 9838554 - 9838380
Alignment:
Q  50 cttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaactt 149  Q
    ||||||||||||||||||||| | ||| |||||||||  ||||||||| | |||| | ||||||||||| |||  ||||| ||||||||||| | ||  |    
T  9838554 cttacttttctgcaaccaaaa-cgggtaacttgctcttttgcaaacagataaaaattacaatctctaacgcttcactcttttattttatatcgtcaaact 9838456  T
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattact 225  Q
    |||||||||||   |||||||||  || ||| ||||||  || ||||||| |||||||| ||||||||||||||||    
T  9838455 aaaataagtaacgcgagttgtttcaacaaaatgacaatccatgtggatacaatactctacttatcactttattact 9838380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 257
Target Start/End: Original strand, 21672325 - 21672542
Alignment:
Q  40 ctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa-tctctaaccctttt-ctcttctatttta 137  Q
    |||||||| |||||||||| |||||| |||| ||||| |||||||| | |||||| || | |||| ||||| ||||||| |||||  ||||| |  |||     
T  21672325 ctaaccgccacttacttttatgcaacgaaaa-caggtaacttgctcagttgcaaatagataaaaattgcaaatctctaatcctttaactcttattattt- 21672422  T
Q  138 tatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatt 237  Q
    |||| | |||| |||| ||||||   || |||||| ||||||| || |||  || |||||||||||||||| |||||||||||||||||| |||| ||||    
T  21672423 tatcgtcaactaaaaaaaagtaacacgaattgtttggacgaaaagataatccatgtggatacgatactctacttatcactttattacttggtaaacgatt 21672522  T
Q  238 tggtacacttgcctaatccg 257  Q
    |||| |||||||||||||||    
T  21672523 tggtgcacttgcctaatccg 21672542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 23143821 - 23143714
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| ||||||||||||||   | |||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  23143821 aaaataagtaacatgaattgtttggacgaaacgacaatccctgtggatatgatactctacttatcactttattaattggtaaatgatttggtacacttgc 23143722  T
Q  250 ctaatccg 257  Q
    ||||||||    
T  23143721 ctaatccg 23143714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 150 - 248
Target Start/End: Complemental strand, 9516884 - 9516786
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    |||||||||||   ||||||||| ||||||||||||||  || |||||||||||||||| |||||||||||||||| | |||| |||||||||||||||    
T  9516884 aaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattactaggtaaacgatttggtacacttg 9516786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 244
Target Start/End: Original strand, 23645668 - 23645861
Alignment:
Q  50 cttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaactt 149  Q
    ||||||||| ||||||||||| || || |||||||||| ||||||||  | |||| ||||||||||||||||   ||||| |||||||| | ||          
T  23645668 cttacttttatgcaaccaaaa-catgtaacttgctctgttgcaaacaaataaaaattgcaatctctaaccctcaactcttttattttattttattgttca 23645766  T
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtaca 244  Q
    ||||||| |||    | |||||| ||||||||||||||   |||||||||||||||||| |||||||||||||||||| |||| |||||||||||    
T  23645767 aaaataattaacgataattgtttggacgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaacgatttggtaca 23645861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 26 - 259
Target Start/End: Original strand, 27737565 - 27737798
Alignment:
Q  26 ggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtca-cttgctctgatgcaaacagttcaaaactgcaa-tctctaacccttt 123  Q
    |||||| |||| | ||||||||  ||||||||| |||||| |||||||||| | ||||||||| ||||||||| | |||| ||||| ||||||||||||     
T  27737565 ggattcgaagaatcctaaccgctgcttacttttttgcaac-aaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaactctctaaccctta 27737663  T
Q  124 tctcttctattttatatcataaactta---aaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcacttta 220  Q
    ||| ||| |||||||  | | ||||||   ||||||||||   || |||||| |||||||| |||||   | ||| || ||||||||| |||||||||||    
T  27737664 tct-ttc-attttat--cgtcaacttacaaaaataagtaacgcgaattgtttggacgaaacaacaatccttgtgggtatgatactctacttatcacttta 27737759  T
Q  221 ttacttgctaaatgatttggtacacttgcctaatccgat 259  Q
    ||||||| |||| ||||| ||||||||||||||||||||    
T  27737760 ttacttggtaaacgatttagtacacttgcctaatccgat 27737798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 257
Target Start/End: Original strand, 21679741 - 21679958
Alignment:
Q  40 ctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa-tctctaaccctttt-ctcttctatttta 137  Q
    |||||||| |||||||||| |||||| |||| ||||| |||||||| | |||||| || | |||| ||||| ||||||| |||||  ||||| |  |||     
T  21679741 ctaaccgccacttacttttatgcaacgaaaa-caggtaacttgctcagttgcaaatagataaaaattgcaaatctctaatcctttaactcttattattt- 21679838  T
Q  138 tatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatt 237  Q
    |||| | |||| |||| ||||||   || |||||| ||||||| || |||  || |||||||||||||||| |||||||||||||||||  |||| ||||    
T  21679839 tatcgtcaactaaaaaaaagtaacacgaattgtttggacgaaaagataatccatgtggatacgatactctacttatcactttattacttagtaaacgatt 21679938  T
Q  238 tggtacacttgcctaatccg 257  Q
    |||| |||||||||||||||    
T  21679939 tggtgcacttgcctaatccg 21679958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 167 - 265
Target Start/End: Original strand, 25927320 - 25927418
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatcac 265  Q
    |||||| |||||||| | |||  || ||||||||||| |||| |||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||    
T  25927320 ttgtttggacgaaactaaaatccatgtggatacgatattctacttatcactttattacttggtaaacgttttggtacacttgcctaatccgaccatcac 25927418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 107 - 258
Target Start/End: Original strand, 21688752 - 21688903
Alignment:
Q  107 gcaatctctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactc 206  Q
    |||||||||||||  |  ||||| ||||||||||| | |||| |||||||||||   || || ||| || | |||||||||   ||||||||| ||||||    
T  21688752 gcaatctctaacctctaactcttttattttatatcttcaactcaaaataagtaacgcgaattttttggatgtaacgacaatccctatggatacaatactc 21688851  T
Q  207 taattatcactttattacttgctaaatgatttggtacacttgcctaatccga 258  Q
    || ||||||||| |||||||  |||| |||| ||||||||| ||||||||||    
T  21688852 tacttatcacttgattacttagtaaacgattgggtacactttcctaatccga 21688903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 14079491 - 14079548
Alignment:
Q  197 tacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaat 254  Q
    |||||||||||| |||||||||||| ||||| |||| |||||||||||||||||||||    
T  14079491 tacgatactctacttatcactttataacttggtaaacgatttggtacacttgcctaat 14079548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 22566183 - 22566256
Alignment:
Q  171 ttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtaca 244  Q
    ||||||||| ||||||||  | |||||| ||||||||| |||||||||||||||||| ||||| ||||||||||    
T  22566183 ttagacgaagcgacaattcttgtggatatgatactctacttatcactttattacttggtaaataatttggtaca 22566256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 23844465 - 23844562
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    |||||||||||   ||||||||| ||||||||||||||   | | |||| ||||||||| |||||| ||||||||||| |||| ||||||||||||||    
T  23844465 aaaataagtaacgcgagttgtttggacgaaacgacaatccctttagatatgatactctacttatcattttattacttggtaaacgatttggtacactt 23844562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 17827092 - 17827192
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| || |||||||||||  || |||||||||||||||| |||| ||||||||||||  |||| || |||||||||||||    
T  17827092 aaaataagtaacgcgaattgtttggaagaaacgacaatccatgtggatacgatactctatttataactttattacttattaaacgagttggtacacttgc 17827191  T
Q  250 c 250  Q
    |    
T  17827192 c 17827192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 21932100 - 21932160
Alignment:
Q  198 acgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccga 258  Q
    ||||||||||| |||||||||||||||||| ||||  ||||||||||||||||||| ||||    
T  21932100 acgatactctacttatcactttattacttggtaaacaatttggtacacttgcctaacccga 21932160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 27124518 - 27124589
Alignment:
Q  176 cgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    ||||||||||||  || | ||||||||| | ||||||||||||||||||||| |||| ||||||||||||||    
T  27124518 cgaaacgacaatccatgtcgatacgataatataattatcactttattacttggtaaacgatttggtacactt 27124589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 5624689 - 5624635
Alignment:
Q  200 gatactctaattatcactttattacttgctaaatgatttggtacacttgcctaat 254  Q
    ||||||||| |||||||||||||||||| |||| ||||||||||| |||||||||    
T  5624689 gatactctacttatcactttattacttggtaaacgatttggtacatttgcctaat 5624635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 18075405 - 18075495
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    |||||| ||| ||||||||||  |  |||||||||||||||  |||||||||||||||||| ||||  |||| |||||||| |||||||||    
T  18075405 ttgtttggacaaaacgacaatccacgtggatacgatactctgcttatcactttattacttggtaaacaatttcgtacactttcctaatccg 18075495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 20005903 - 20005977
Alignment:
Q  174 gacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    |||||||||| |||  || | |||||||||||||  |||||||||||||||||| |||| |||||||||||||||    
T  20005903 gacgaaacgaaaatccatgtagatacgatactctgcttatcactttattacttggtaaacgatttggtacacttg 20005977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 264
Target Start/End: Original strand, 7543005 - 7543074
Alignment:
Q  195 gatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||||||||||| || |||||||||||||||||| ||||  ||||| |||| ||||||||||||| |||||    
T  7543005 gatacgatactttacttatcactttattacttggtaaacaatttgatacatttgcctaatccgaccatca 7543074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 20145106 - 20145166
Alignment:
Q  196 atacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    |||| |||||||| |||||||||||||||||| | ||  ||||||||||||||||||||||    
T  20145106 ataccatactctacttatcactttattacttggtgaacaatttggtacacttgcctaatcc 20145166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 22187733 - 22187673
Alignment:
Q  196 atacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    |||| |||||||| |||||||||||||||||| | ||  ||||||||||||||||||||||    
T  22187733 ataccatactctacttatcactttattacttggtgaacaatttggtacacttgcctaatcc 22187673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 26215414 - 26215488
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    ||||||||||| |||||||||||||||||||| ||| |||||||||| |||  ||||||||||||||  ||||||||    
T  26215414 gaaacgacaatctatatggatacgatactctactta-cactttattatttg-gaaatgatttggtactattgcctaa 26215488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 20002442 - 20002497
Alignment:
Q  210 ttatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatcac 265  Q
    |||||||||||||||||| ||| |||||||||||||||||||| | ||| ||||||    
T  20002442 ttatcactttattacttggtaattgatttggtacacttgcctatttcgaccatcac 20002497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 8039178 - 8039239
Alignment:
Q  196 atacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccga 258  Q
    ||||||||||| | ||| |||||||||||||| |||| ||||||| |||||||||||||||||    
T  8039178 atacgatactccactta-cactttattacttggtaaacgatttggcacacttgcctaatccga 8039239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 23231983 - 23232065
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaa 232  Q
    |||||||||||   || |||||| |||||| ||||||||  |||||||| ||||| ||| |||||||||||||||||| ||||    
T  23231983 aaaataagtaacgcgaattgtttggacgaaccgacaattcttatggatatgataccctacttatcactttattacttggtaaa 23232065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 167 - 244
Target Start/End: Original strand, 17299848 - 17299925
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtaca 244  Q
    |||||| ||| ||||||||||    ||| ||||||||||||| |||||||||||||||||| |||| |||||| ||||    
T  17299848 ttgtttggactaaacgacaatcccgatgaatacgatactctacttatcactttattacttggtaaacgatttgctaca 17299925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 28589477 - 28589533
Alignment:
Q  197 tacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    ||||||||| || |||||||||| ||| ||| |||| ||||||||||||||||||||    
T  28589477 tacgatactttacttatcactttgttatttgataaacgatttggtacacttgcctaa 28589533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 24657343 - 24657389
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaa 70  Q
    |||||||| |||| ||||||||||  |||||||||||||||||||||    
T  24657343 ggggattcgaagaattctaaccgctgcttacttttctgcaaccaaaa 24657389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 2586769 - 2586716
Alignment:
Q  201 atactctaattatcactttattacttgctaaatgatttggtacacttgcctaat 254  Q
    ||||| || ||||||||| |||||||| ||||  ||||||||||||||||||||    
T  2586769 atactatacttatcacttcattacttggtaaacaatttggtacacttgcctaat 2586716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 17826974 - 17827019
Alignment:
Q  28 attcaaagagttctaaccgcaacttacttttctgcaaccaaaaaca 73  Q
    ||||||||| |||||||||   ||||||||||||||||||||||||    
T  17826974 attcaaagaattctaaccgttgcttacttttctgcaaccaaaaaca 17827019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 27124361 - 27124441
Alignment:
Q  16 atatatatggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggt-cacttgctctgatgcaaaca 96  Q
    ||||||| ||||||||||||| |  |||||||  ||||||||||||||||| || ||||||  |||||||||| ||||||||    
T  27124361 atatataaggggattcaaagaatcttaaccgctgcttacttttctgcaacc-aagacaggtaaacttgctctgttgcaaaca 27124441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 28586057 - 28586133
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||||||||  || | |||| ||||||||| |||||| ||||||||| | |||| ||||||||| ||||| ||||    
T  28586057 gaaacgacaatccatgtcgatatgatactctacttatcaatttattactcggtaaacgatttggtatacttgtctaa 28586133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 4e-45; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 41 - 264
Target Start/End: Complemental strand, 21325548 - 21325325
Alignment:
Q  41 taaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaaccctttt-ctcttctattttata 139  Q
    ||||||| |||||||||||||||||||||   |||| |||||||||| |||||| || | |||| |||||||||||||||||   ||||| |||||||||    
T  21325548 taaccgctacttacttttctgcaaccaaatt-aggtaacttgctctgttgcaaatagataaaaattgcaatctctaacccttcaactcttttattttata 21325450  T
Q  140 tcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttg 239  Q
    || | ||||||||||||||||    | |||||| |||||||||||||||| | ||||||||||||| || |||||| ||||||||||| ||||  |||||    
T  21325449 tcgttaacttaaaataagtaacacaaattgtttggacgaaacgacaatttttgtggatacgatactatacttatcagtttattacttggtaaacaatttg 21325350  T
Q  240 gtacacttgcctaatccgatcatca 264  Q
    |||||||||||||||| ||||||||    
T  21325349 gtacacttgcctaatcagatcatca 21325325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 25 - 264
Target Start/End: Original strand, 12805766 - 12806004
Alignment:
Q  25 gggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaaccctttt 124  Q
    ||||||| |||| | |||||| |  ||||||||||||||||||||  ||||| | || ||||| ||||||||| | |||| ||||||||||||||||||     
T  12805766 gggattcgaagaatcctaacccctgcttacttttctgcaaccaaat-caggtaattttctctgttgcaaacagataaaaattgcaatctctaacccttta 12805864  T
Q  125 ctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattac 224  Q
     |||| ||||||||| | |  |||||||||||||||    | |||||| || |||||||||||  || |||||| ||||||||| |||||||||||||||    
T  12805865 atcttttattttataacgtcgacttaaaataagtaacgcaaattgtttggatgaaacgacaatccatgtggatatgatactctacttatcactttattac 12805964  T
Q  225 ttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||| |||||||||||||||||||||||||||||| |||||    
T  12805965 ttggtaaatgatttggtacacttgcctaatccgaccatca 12806004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 24 - 257
Target Start/End: Original strand, 21303229 - 21303461
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||||||| | | ||||||||  ||||||||||||||||||||| || || |||||||||| ||||||||| | |||| ||||||||||||||||||    
T  21303229 ggggattcaaataatcctaaccgctgcttacttttctgcaaccaaaa-caagtaacttgctctgttgcaaacagataaaaattgcaatctctaacccttt 21303327  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
     ||||| ||||||||||  | ||||||||||||||||  | | |||||| || ||||| ||||| | | ||| |||||||||||| |||||| |||||||    
T  21303328 actcttttattttatatagtcaacttaaaataagtaacggaaattgtttggatgaaacaacaatctttgtggctacgatactctacttatcattttatta 21303427  T
Q  224 cttgctaaatgatttggtacacttgcctaatccg 257  Q
     ||| |||| |||||| ||||||||| |||||||    
T  21303428 tttggtaaacgatttgatacacttgcataatccg 21303461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 13 - 257
Target Start/End: Original strand, 16245593 - 16245836
Alignment:
Q  13 aatatatatatggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgc-aat 111  Q
    |||||| ||| ||||||||  ||| ||||||||||  ||||||||||||||||||||||||||| |||||||||| |||||| || | |||| ||| |||    
T  16245593 aatataaatagggggattcggagaattctaaccgctgcttacttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaaat 16245692  T
Q  112 ctctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaatt 211  Q
    |||||||||||  ||||| |||||||| |   |||| ||||||||||||   || |||||| ||||||| || |||  || |||||| ||||||||| ||    
T  16245693 ctctaacccttaactcttttattttat-tgtcaaac-taaaataagtaacgagaattgtttggacgaaatgataatccatgtggatatgatactctactt 16245790  T
Q  212 atcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    |||||||||||||||| |||| || |||||||||||| ||||||||    
T  16245791 atcactttattacttggtaaacgagttggtacacttgtctaatccg 16245836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 13 - 255
Target Start/End: Original strand, 2167481 - 2167721
Alignment:
Q  13 aatatatatatggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa-t 111  Q
    |||||| ||| |||||||| |||| | |||||| |  ||||||||||  ||||||||| ||||| ||||| | || ||||||||| | |||| ||||| |    
T  2167481 aatataaatagggggattcgaagaatcctaaccacttcttacttttccacaaccaaaa-caggtaacttggtatgttgcaaacagataaaaattgcaaat 2167579  T
Q  112 ctctaacccttttctcttctattttata-tcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaat 210  Q
    |||||||| ||| ||||| ||||||||| |||  |||| ||||||||||||  || |||||| |||||||||||| ||||| |||||||||||||||| |    
T  2167580 ctctaaccatttactcttttattttatagtca--aactaaaaataagtaatgtgaattgtttggacgaaacgacattttatgtggatacgatactctact 2167677  T
Q  211 tatcactttattacttgctaaatgatttggtacacttgcctaatc 255  Q
    ||||||||||||||||| | || ||||||||||||||| ||||||    
T  2167678 tatcactttattacttggt-aacgatttggtacacttgtctaatc 2167721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 51 - 254
Target Start/End: Original strand, 3116321 - 3116522
Alignment:
Q  51 ttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa-tctct-aacccttttctcttctattttatatcataaact 148  Q
    |||||||||||||||||||| |||||  ||||||||| ||||||||| | |||| ||||| ||||| ||||||| |||||| ||||||||  | | ||||    
T  3116321 ttacttttctgcaaccaaaaccaggtatcttgctctgttgcaaacagataaaaattgcaaatctcttaacccttatctctt-tattttat--cgtcaact 3116417  T
Q  149 taaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    ||||||||||||   || |||||| ||||||||||||||   | ||||||| |||||| | |||||||||||||||||| ||||  ||||||||||||||    
T  3116418 taaaataagtaacgtgaattgtttggacgaaacgacaatccctgtggatactatactc-acttatcactttattacttggtaaacaatttggtacacttg 3116516  T
Q  249 cctaat 254  Q
    ||||||    
T  3116517 cctaat 3116522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 21302017 - 21301910
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    ||||||||||| | || |||||| ||||||| ||||||  || |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  21302017 aaaataagtaactcgaattgtttggacgaaatgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgc 21301918  T
Q  250 ctaatccg 257  Q
    ||||||||    
T  21301917 ctaatccg 21301910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 150 - 248
Target Start/End: Complemental strand, 22349508 - 22349410
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    ||||||||||||  || |||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||    
T  22349508 aaaataagtaatgtgaattgtttggacgaaacgacaatttatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacacttg 22349410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 51 - 264
Target Start/End: Complemental strand, 5508532 - 5508321
Alignment:
Q  51 ttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa-tctct-aacccttttctcttctattttatatcataaact 148  Q
    ||||||||||||||| ||||||| || |||||||||  ||||||||| | |||| | ||| ||||| ||||||| |||||| ||||||||  | | | ||    
T  5508532 ttacttttctgcaacaaaaaacatgtaacttgctctattgcaaacagataaaaatttcaaatctcttaacccttatctctt-tattttat--cgtcacct 5508436  T
Q  149 taaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    ||||||||||||   ||| ||||| ||||||||||||||  || ||||||  |||||| | ||||||||||||||||||  |||||||||||||||||||    
T  5508435 taaaataagtaacgcgagatgtttggacgaaacgacaatccatgtggatattatactc-acttatcactttattacttggcaaatgatttggtacacttg 5508337  T
Q  249 cctaatccgatcatca 264  Q
    |||||| ||| |||||    
T  5508336 cctaattcgaccatca 5508321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 148 - 264
Target Start/End: Complemental strand, 10745003 - 10744887
Alignment:
Q  148 ttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    ||||||||| ||||  || |||||||||||||||||||||   |||||| ||||||||||| |||||||||||||||||| |||| ||||||||| ||||    
T  10745003 ttaaaataattaatgtgatttgtttagacgaaacgacaatccctatggaaacgatactctacttatcactttattacttggtaaacgatttggtaaactt 10744904  T
Q  248 gcctaatccgatcatca 264  Q
    |||||||  ||||||||    
T  10744903 gcctaatttgatcatca 10744887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 101 - 264
Target Start/End: Complemental strand, 8319187 - 8319025
Alignment:
Q  101 aaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacg 200  Q
    |||| ||||||||||||| ||| |||||| ||||||||||||| ||||||||||||||||   || ||||||  ||||||||| |||   | |||||||     
T  8319187 aaaattgcaatctctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgtttgtacgaaacgataatccctgtggatact 8319088  T
Q  201 atactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||| |||| ||||||||| |||||||| |||| || |||||| |||||||||||| || |||||    
T  8319087 atattctacttatcacttcattacttggtaaacga-ttggtatacttgcctaatctgaccatca 8319025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 10917999 - 10917912
Alignment:
Q  168 tgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatc 255  Q
    |||||||||||||| |||||  || |||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||||||    
T  10917999 tgtttagacgaaacaacaatccatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacacttgcctaatc 10917912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 264
Target Start/End: Complemental strand, 12411225 - 12411136
Alignment:
Q  175 acgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||||||||||   | |||||||||||||||| | |||||||||||||||| ||| ||||||||||||||||||| |||||| |||||    
T  12411225 acgaaacgacaatccttgtggatacgatactctactaatcactttattacttggtaagtgatttggtacacttgccttatccgaccatca 12411136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 28729016 - 28728940
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    ||||||||||| ||| |||||||||||||||| |||||||||||||||||| ||||| |||||  ||||||||||||    
T  28729016 gaaacgacaatctatgtggatacgatactctacttatcactttattacttgataaattatttgacacacttgcctaa 28728940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 24 - 257
Target Start/End: Complemental strand, 41508591 - 41508359
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa-tctctaaccctt 122  Q
    ||||||||||||| |  |||||||   |||||||||||||||||||| || || ||||||| || ||||||||| |  ||| ||||| ||||||||||||    
T  41508591 ggggattcaaagaatcttaaccgctggttacttttctgcaaccaaaa-catgtaacttgctttgttgcaaacagatacaaattgcaaatctctaaccctt 41508493  T
Q  123 ttctcttctattttata-tcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttat 221  Q
      ||||| ||||||||  |||  || | ||||||||||||   | |||||| ||| ||||||||||       ||||||||| ||||  |||||||||||    
T  41508492 aactcttttattttatcgtca--aattaaaaataagtaatgcaaattgtttggactaaacgacaatccccgcagatacgatattctacctatcactttat 41508395  T
Q  222 tacttgctaaatgatttggtacacttgcctaatccg 257  Q
    |||||| |||| ||||||||||||||||||||||||    
T  41508394 tacttgataaacgatttggtacacttgcctaatccg 41508359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 6290001 - 6289888
Alignment:
Q  151 aaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    |||||||||||  || |||| || |||||| || |||  || |||||| ||||||||| |||||||||||||||||| |||| |||||| |||| |||||    
T  6290001 aaataagtaatgcgaattgtctacacgaaatgataatccatgtggatatgatactctacttatcactttattacttggtaaacgatttgatacatttgcc 6289902  T
Q  251 taatccgatcatca 264  Q
    |||||||| |||||    
T  6289901 taatccgaccatca 6289888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 10923203 - 10923150
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacact 246  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  10923203 tggatacgatactgtaattatcactttattacttggtaaatgatttggtacact 10923150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 17156015 - 17155881
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||||||| ||| |||| ||| ||||||||||||||||||  ||| |||| |||||||||| ||||||||| | |||| |||||| |||||||| |     
T  17156015 ggggattcaaatagtcctaatcgctacttacttttctgcaacc--aaataggtaacttgctctgttgcaaacagataaaaattgcaatttctaacccgta 17155918  T
Q  124 tctcttctattttatatcataaacttaaaataagtaa 160  Q
     ||||| | ||||||||| | ||  ||||||||||||    
T  17155917 actctttttttttatatcgttaaactaaaataagtaa 17155881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 255
Target Start/End: Original strand, 821531 - 821619
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatc 255  Q
    ||||||| ||||||||| |||  || |||||||||||||||| |||||||||||||||||| |||| ||||||||| || ||| |||||    
T  821531 ttgtttacacgaaacgaaaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtagacatgcttaatc 821619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 18458467 - 18458530
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    |||||||||||||||| |||||||||||||||||| ||||  |||||||||||||| |||||||    
T  18458467 tggatacgatactctacttatcactttattacttgataaacaatttggtacacttgtctaatcc 18458530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 31286058 - 31286128
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||||||||||| |||| ||| |||||||||||||| |||||||||||||||||||| ||||||||| |||||    
T  31286058 tggatacgatattctagtta-cactttattacttggtaaatgatttggtacacttgtctaatccgaccatca 31286128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 254
Target Start/End: Original strand, 18736670 - 18736775
Alignment:
Q  148 ttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    |||||||||||||   |||||||||||||||||||||||    | | ||||||||| |||| |||| ||||||||||||| |||| ||||||||||||||    
T  18736670 ttaaaataagtaacgcgagttgtttagacgaaacgacaacacctgtagatacgatattctacttat-actttattacttggtaaacgatttggtacactt 18736768  T
Q  248 gcctaat 254  Q
    | |||||    
T  18736769 gtctaat 18736775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 12759459 - 12759383
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||||||||   | |||||||||||||||| |||||||||||||||||| ||||  |||||||||||||| ||||    
T  12759459 gaaacgacaatacttgtggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgtctaa 12759383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 11533018 - 11533089
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||||| ||||||| |||||||||||||| ||| |||||| |||||||||||||  ||||||| ||||||    
T  11533018 tggatacggtactctacttatcactttattatttggtaaatgttttggtacacttgtttaatccgttcatca 11533089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 265
Target Start/End: Complemental strand, 25756745 - 25756658
Alignment:
Q  179 aacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcct-aatccgatcatcac 265  Q
    ||||||||||| | |||||||||||||||| |||   |||||||| ||| |||||||||| |||||||||||| ||||||| ||||||    
T  25756745 aacgacaatttttgtggatacgatactctacttacttctttattatttgataaatgattttgtacacttgcctaaatccgaccatcac 25756658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 13908246 - 13908331
Alignment:
Q  170 tttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    |||||| ||||||| |||   |||||||| ||||||||| ||||||||||||||||||  ||| |||||||||||||| ||||||||    
T  13908246 tttagatgaaacgataatccctatggatatgatactctacttatcactttattacttg-gaaaagatttggtacactttcctaatcc 13908331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 20429764 - 20429695
Alignment:
Q  195 gatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||||||||||| |||||| ||||||||||| ||||  |||| |||||| |||||||||||| |||||    
T  20429764 gatacgatactctacttatcattttattacttggtaaacaatttagtacacatgcctaatccgaccatca 20429695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 160
Target Start/End: Original strand, 2723712 - 2723845
Alignment:
Q  26 ggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaact-gcaatctctaaccctttt 124  Q
    ||||||||| |||  |||||||  ||||||||| ||||||||||  ||||| ||||||| || ||||||||| | |||| | ||||| ||||||||||      
T  2723712 ggattcaaatagtcttaaccgctgcttacttttttgcaaccaaa--caggtaacttgctttgttgcaaacagataaaaatttgcaatatctaacccttaa 2723809  T
Q  125 ctcttctattttatatcataaacttaaaataagtaa 160  Q
    ||| | ||||||||||||| ||  ||||||||||||    
T  2723810 ctcatttattttatatcatcaaactaaaataagtaa 2723845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 11518004 - 11518075
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||| |||| |||| |||||||||||||||||| | || |||||||||||||||| |||| ||| |||||    
T  11518004 tggatatgatattctacttatcactttattacttgatgaacgatttggtacacttgcttaattcgaccatca 11518075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 21825744 - 21825834
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctct 115  Q
    ||||||||||||||| |||||    ||||||||||||||||||||||| |||| ||||||| || | ||||||| | |||| ||||||||||    
T  21825744 ggggattcaaagagtcctaactcttacttacttttctgcaaccaaaaa-aggtaacttgctatgttacaaacagataaaaattgcaatctct 21825834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 21825887 - 21825973
Alignment:
Q  168 tgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatc 255  Q
    ||||| |||||||| | |||  || |||||||||||||||| ||| |||||||||||| | |||| |||||||||||||| |||||||    
T  21825887 tgtttggacgaaacaaaaatccatgtggatacgatactctactta-cactttattactcggtaaacgatttggtacacttacctaatc 21825973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 8557146 - 8557204
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattact 225  Q
    ||||||| | |||||||||||  || |||||||||||||||| ||||||||||||||||    
T  8557146 ttgtttaaatgaaacgacaatccatgtggatacgatactctacttatcactttattact 8557204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 932841 - 932726
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    ||||||||||||  || || ||| ||||||| |||||| | | |||||||||||||||| |||||| ||||||||||  |||| || ||| |||||||||    
T  932841 aaaataagtaatgtgaattttttggacgaaaggacaatctctgtggatacgatactctatttatcaatttattacttagtaaacga-ttgatacacttgc 932743  T
Q  250 c--taatccgatcatca 264  Q
    |   |||||||||||||    
T  932742 catcaatccgatcatca 932726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 4650287 - 4650231
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    ||||||||||||| || | |||||||||||||||| ||||||| ||||||||||||||    
T  4650287 tggatacgatactttactcatcactttattacttggtaaatga-ttggtacacttgcc 4650231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 17438431 - 17438527
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    |||||||||||   || |||||| ||||||||||||||  || |||||| ||||||||| |||||| ||||| ||||| | || ||||||||||||||    
T  17438431 aaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatatgatactctacttatcattttataacttggt-aacgatttggtacactt 17438527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 19908363 - 19908307
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    ||||||||||||| || |||||| ||||||| ||| |||| ||||||||||||||||    
T  19908363 tggatacgatactatacttatcattttattatttggtaaacgatttggtacacttgc 19908307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 19909847 - 19909899
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggt 76  Q
    ||||||||||||| | ||||||||  |||||||||||||||| ||||||||||    
T  19909847 ggggattcaaagaatcctaaccgctgcttacttttctgcaacaaaaaacaggt 19909899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 21074581 - 21074636
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||||||| ||||    
T  21074581 tggatacgatactctactta-cactttattacttgatagatgatttggtacagttgc 21074636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 264
Target Start/End: Complemental strand, 7148059 - 7147973
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||||||||  || |||| ||||||||||| ||||   |||| |||||| |||| ||||||||||| ||||||||||||| |||||    
T  7148059 gaaacgacaatccatgtggagacgatactctacttattt-tttagtacttggtaaacgatttggtacatttgcctaatccgaccatca 7147973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 8143670 - 8143600
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||||||| |||||||| ||| ||||||||| |||  |||| |||||||||||||| ||||||| ||||||||    
T  8143670 tggatacaatactctactta-cactttattgcttagtaaacgatttggtacacttacctaatctgatcatca 8143600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 19171834 - 19171941
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    ||||||||||||   | |||||| ||||||||||||||   | || ||| ||| ||||  |||||||||||||||||| ||||  |||| ||| ||||||    
T  19171834 aaaataagtaatgcaaattgtttggacgaaacgacaatccttgtgaatatgatcctctgcttatcactttattacttggtaaacaatttagtatacttgc 19171933  T
Q  250 ctaatccg 257  Q
    ||||||||    
T  19171934 ctaatccg 19171941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 8267155 - 8267109
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaa 70  Q
    ||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  8267155 ggggattcaaagagtcctaaccgctactgacttttatgcaaccaaaa 8267109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 20023427 - 20023473
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaa 70  Q
    ||||||||||||| | ||||| || ||||||||||||||||||||||    
T  20023427 ggggattcaaagaatcctaactgctacttacttttctgcaaccaaaa 20023473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 265
Target Start/End: Complemental strand, 8770101 - 8770002
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc--taatccgatcatca 264  Q
    ||||| |||| ||| ||||||  || |||||| |||||| || |||||||||||||||||| | || || ||||||||||||||  ||||||||| ||||    
T  8770101 ttgttcagacaaaaggacaatccatgtggatatgatactttacttatcactttattacttggttaacga-ttggtacacttgccattaatccgattatca 8770003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 12754797 - 12754870
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggt-cacttgctctgatgcaaaca 96  Q
    |||||||| |||| | ||||||||  ||||||||||||||||||||| |||||  ||| |||||| ||||||||    
T  12754797 ggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaccaggtaaactagctctgttgcaaaca 12754870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 8170096 - 8170044
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggt 76  Q
    |||||||| |||| | ||||||||  | |||||||||||||||||||||||||    
T  8170096 ggggattcgaagaatcctaaccgctgcatacttttctgcaaccaaaaacaggt 8170044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 16229831 - 16229915
Alignment:
Q  27 gattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcactt-gctctgatgcaaacagttcaaaactgcaa 110  Q
    ||||| |||| | ||||||||  ||||||||| ||||||||||||||||| | || |||||| ||||||||| | |||| |||||    
T  16229831 gattcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa 16229915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 21019639 - 21019698
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||| ||||||||| |||| ||||||||||||| || ||||||||||||  ||||||||    
T  21019639 tggataagatactctacttat-actttattacttggtagatgatttggtactgttgcctaa 21019698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 22245377 - 22245341
Alignment:
Q  222 tacttgctaaatgatttggtacacttgcctaatccga 258  Q
    |||||| |||| |||||||||||||||||||||||||    
T  22245377 tacttggtaaacgatttggtacacttgcctaatccga 22245341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 27413787 - 27413823
Alignment:
Q  40 ctaaccgcaacttacttttctgcaaccaaaaacaggt 76  Q
    ||||||||  |||||||||||||||||||||||||||    
T  27413787 ctaaccgctgcttacttttctgcaaccaaaaacaggt 27413823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 27542948 - 27543011
Alignment:
Q  183 acaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    |||||| || |||||||||||||||| |||| |||||||| |||| |||| |||||| |||||||    
T  27542948 acaattcatgtggatacgatactctacttat-actttatttcttggtaaacgatttgatacactt 27543011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 24 - 227
Target Start/End: Original strand, 43101 - 43304
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    |||||||||||||||  ||||||| | ||  ||||||| |||||||||||||| |||||||||| ||||||||| | |||| |||||||||||||||||     
T  43101 ggggattcaaagagtcttaaccgctattttgttttctgtaaccaaaaacaggtaacttgctctgttgcaaacagataaaaattgcaatctctaaccctta 43200  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
    |||||| ||||||||||| | || |||||||||||||   ||| ||||||||||||||||||||   | |||||||| |||| || ||||||||||||||    
T  43201 tctcttttattttatatcgtcaatttaaaataagtaacacgagctgtttagacgaaacgacaatccttgtggatacgttactttacttatcactttatta 43300  T
Q  224 cttg 227  Q
    ||||    
T  43301 cttg 43304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 24 - 264
Target Start/End: Original strand, 18208125 - 18208362
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    |||||||| ||||||| |||| || |||||||||||||||||||||  ||||| |||||||||  ||||||||| | |||| ||||| ||| |||||||     
T  18208125 ggggattcgaagagttgtaactgctacttacttttctgcaaccaaa--caggtaacttgctctactgcaaacagataaaaattgcaacctccaaccctta 18208222  T
Q  124 tctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatta 223  Q
     ||||| ||||||||||||| ||   |||||||||||   || |||||| ||||||| ||||||  || |||||||||||||||| ||| ||||||||||    
T  18208223 actcttttattttatatcatcaaaacaaaataagtaacatgaattgtttggacgaaaggacaatccatgtggatacgatactctactta-cactttatta 18208321  T
Q  224 cttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||  |||| ||||||||||||||||||||||||| |||||    
T  18208322 ctttgtaaacgatttggtacacttgcctaatccgaccatca 18208362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 51 - 264
Target Start/End: Complemental strand, 18937945 - 18937733
Alignment:
Q  51 ttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctct-aacccttttctcttctattttatatcataaactt 149  Q
    |||| |||||||||||||||||| || |||||||||| ||||||||| | |||| || ||||||| |||||||  ||||| ||||||||||||| |||||    
T  18937945 ttacatttctgcaaccaaaaacatgtaacttgctctgttgcaaacagataaaaattgaaatctctcaacccttaactctt-tattttatatcattaactt 18937847  T
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| |||||||| |||||   | || |||||||||| || |||||||||||||||||  |||| ||||||||||||||||    
T  18937846 aaaataagtaacgtgaattgtttggacgaaacaacaatccctctgaatacgatact-tacttatcactttattacttaataaacgatttggtacacttgc 18937748  T
Q  250 ctaatccgatcatca 264  Q
    ||||||||| |||||    
T  18937747 ctaatccgaccatca 18937733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 78 - 265
Target Start/End: Complemental strand, 22755693 - 22755505
Alignment:
Q  78 acttgctctgatgcaaacagttcaaaactgcaa-tctctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagac 176  Q
    |||||||||| ||||||||| | |||| || || ||||||||||||  ||||| ||||||||||| ||||  |||||||| ||||   | |||||| ||     
T  22755693 acttgctctgttgcaaacagataaaaattgtaaatctctaacccttaactcttttattttatatcgtaaaactaaaataaataatgccaattgtttggaa 22755594  T
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatcac 265  Q
    |||||||||||   |||||||||||||||||| ||||| ||| |||||||| |||| |||| |||||||||| ||||||||| ||||||    
T  22755593 gaaacgacaatccttatggatacgatactctacttatctcttcattacttggtaaacgattcggtacacttgtctaatccgaccatcac 22755505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 15470018 - 15469927
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccga 258  Q
    |||||||||||||||||||||| || |||||||||||||| |  ||||||||||||||||| |||| |||||||||||||||||||||||||    
T  15470018 ttgtttagacgaaacgacaattcatgtggatacgatactcgacctatcactttattacttggtaaacgatttggtacacttgcctaatccga 15469927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 265
Target Start/End: Complemental strand, 34487858 - 34487623
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    |||||||| |||||| ||||||   ||| |||||||||||||||||  || || | |||||||| || |||||| | |||| |||||||||||||||||     
T  34487858 ggggattctaagagtcctaacc---actaacttttctgcaaccaaa--catgtaaattgctctgttgaaaacagataaaaattgcaatctctaaccctta 34487764  T
Q  124 tctcttctatt-ttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttatt 222  Q
    ||| || |||| ||||||| | ||   |||||||||||   || |||||||||||||||||||||  || |||||| |||| |||| ||| |||||||||    
T  34487763 tcttttttattattatatcgtcaaaacaaaataagtaacgcgaattgtttagacgaaacgacaatccatgtggatatgatattctactta-cactttatt 34487665  T
Q  223 acttgctaaatgatttggtacacttgcctaatccgatcatcac 265  Q
    ||||| ||||  ||||||||||||| | ||| |||||||||||    
T  34487664 acttggtaaacaatttggtacactttcttaa-ccgatcatcac 34487623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 17171574 - 17171661
Alignment:
Q  171 ttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccga 258  Q
    |||||||||||||||||  || |||||||||| ||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  17171574 ttagacgaaacgacaatccatgtggatacgatgctctacttatcactttattacttgataaaagatttggtacacttacctaatccga 17171661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 266
Target Start/End: Original strand, 19283748 - 19283971
Alignment:
Q  41 taaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatat 140  Q
    |||||||  |||| |||||| ||||||||  ||||| |||| ||||  |||||| || | |||| || ||||||||||||||  ||||| || |||||||    
T  19283748 taaccgctgcttaattttctacaaccaaa--caggtaactttctctattgcaaatagattaaaattgtaatctctaacccttaactcttttactttatat 19283845  T
Q  141 cataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttgg 240  Q
    | | |||||||||||||| |    | |||||| |||||||||  ||||  | ||||||| |||||||| |||||||||||||| ||| |||| ||||| |    
T  19283846 cgtcaacttaaaataagttaagcaaattgtttggacgaaacgttaattcttgtggatacaatactctacttatcactttattatttggtaaacgatttag 19283945  T
Q  241 tacacttgcctaatccgatcatcact 266  Q
    | ||||| |||||||||| |||||||    
T  19283946 tgcactttcctaatccgaccatcact 19283971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 19086207 - 19086293
Alignment:
Q  178 aaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||| |||||| || ||||||  |||||||| |||||||||||||||||| |||| ||||||||||||||  |||||||||||||||    
T  19086207 aaacaacaattcatgtggatataatactctacttatcactttattacttggtaaacgatttggtacacttatctaatccgatcatca 19086293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 26 - 264
Target Start/End: Original strand, 24266835 - 24267068
Alignment:
Q  26 ggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttc 125  Q
    |||||| |||||| ||||||||  |||||||| ||| |||||||  ||||||  ||||| || | ||||||| | |||| |||||| ||||||||||  |    
T  24266835 ggattcgaagagtcctaaccgctgcttacttt-ctgtaaccaaa--caggtc--ttgctttgttacaaacagataaaaattgcaatatctaacccttaac 24266929  T
Q  126 tcttctatt-ttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattac 224  Q
    |||| |||| ||||||| | ||   |||||||||||   || |||||| ||| ||| || |||   | |||||||||||||||| ||| |||||||||||    
T  24266930 tcttttattattatatcgtcaaaacaaaataagtaacacgaattgtttggacaaaatgataatccttgtggatacgatactctactta-cactttattac 24267028  T
Q  225 ttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||| |||| ||||||||||||||||||||| ||| |||||    
T  24267029 ttggtaaacgatttggtacacttgcctaattcgaccatca 24267068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 26 - 264
Target Start/End: Original strand, 24343466 - 24343699
Alignment:
Q  26 ggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttc 125  Q
    |||||| |||||| ||||||||  |||||||| ||| |||||||  ||||||  ||||| || | ||||||| | |||| |||||| ||||||||||  |    
T  24343466 ggattcgaagagtcctaaccgctgcttacttt-ctgtaaccaaa--caggtc--ttgctttgttacaaacagataaaaattgcaatatctaacccttaac 24343560  T
Q  126 tcttctatt-ttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattac 224  Q
    |||| |||| ||||||| | ||   |||||||||||   || |||||| ||| ||| || |||   | |||||||||||||||| ||| |||||||||||    
T  24343561 tcttttattattatatcgtcaaaacaaaataagtaacacgaattgtttggacaaaatgataatccttgtggatacgatactctactta-cactttattac 24343659  T
Q  225 ttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||| |||| ||||||||||||||||||||| ||| |||||    
T  24343660 ttggtaaacgatttggtacacttgcctaattcgaccatca 24343699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 150 - 255
Target Start/End: Original strand, 25550504 - 25550609
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| ||||||| ||||||   | |||||| ||||||||| |||||||||||||||||| |||| |||||| |||||||||    
T  25550504 aaaataagtaacaagaattgtttggacgaaatgacaatccctgtggatatgatactctacttatcactttattacttggtaaacgatttgatacacttgc 25550603  T
Q  250 ctaatc 255  Q
    ||||||    
T  25550604 ctaatc 25550609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 26121367 - 26121437
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||||||| |||||||| ||| || |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  26121367 tggatactatactctactta-cattttattacttgctaaacgatttggtacacttgcctaatccgaccatca 26121437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 27 - 258
Target Start/End: Complemental strand, 36175354 - 36175125
Alignment:
Q  27 gattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttct 126  Q
    |||||||||| |  |||||||  ||||||||||| ||||||||| ||||| ||||||| || || |||||| | |||| ||||||||||||||||   ||    
T  36175354 gattcaaagaatcataaccgcttcttacttttctacaaccaaaa-caggtaacttgctttgttgaaaacagataaaaattgcaatctctaaccctcaact 36175256  T
Q  127 cttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattactt 226  Q
    ||| |||||  | | ||      |||||||||||     ||||||| ||||||||||||||   ||||||||||||||||||   | |||||||||||||    
T  36175255 cttttatttattttaattgttcaaaaataagtaacgcatgttgtttggacgaaacgacaatccttatggatacgatactctacaaa-cactttattactt 36175157  T
Q  227 gctaaatgatttggtacacttgcctaatccga 258  Q
    | |||| |||||||||||||||  ||||||||    
T  36175156 ggtaaacgatttggtacacttgtttaatccga 36175125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 24852189 - 24852278
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    ||||||||||||||| |||||  || ||||||||||||| || |||||| ||||||||||| |||  ||||| ||| |||||||||||||    
T  24852189 ttgtttagacgaaacaacaatccatgtggatacgatactatacttatcattttattacttggtaatcgatttagtagacttgcctaatcc 24852278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 256
Target Start/End: Complemental strand, 15690975 - 15690771
Alignment:
Q  50 cttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa-tctctaaccctttt-ctcttctattttatatcataaac 147  Q
    ||||||||||||||||||||| ||||| | |||||||| | | ||||  | |||| ||||| |||||||||||||  ||||| ||||| || |  | |||    
T  15690975 cttacttttctgcaaccaaaa-caggtaatttgctctgttacgaacaaataaaaattgcaaatctctaaccctttaactcttttattt-atttg-tcaac 15690879  T
Q  148 ttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    | |||||||||||   || ||| || |||||||||||||||    |||||||||||||||| |||||||||||||| ||| |||| ||||||||| ||||    
T  15690878 taaaaataagtaacgagaattggttggacgaaacgacaattctcgtggatacgatactctacttatcactttatta-ttggtaaacgatttggtaaactt 15690780  T
Q  248 gcctaatcc 256  Q
     ||||||||    
T  15690779 acctaatcc 15690771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 164 - 248
Target Start/End: Complemental strand, 17431968 - 17431884
Alignment:
Q  164 gagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    ||||||||| || ||||||||||| | | |||||||||||||||| ||  |||||||||||||| |||| ||||| |||||||||    
T  17431968 gagttgtttggatgaaacgacaatctctgtggatacgatactctactttccactttattacttggtaaacgatttagtacacttg 17431884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 19004226 - 19004326
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| ||| ||| ||||||  || |||||||||||||| | |||||||||||||||||| |||| ||||| ||||||||||    
T  19004226 aaaataagtaacgtgaattgtttggacaaaatgacaatccatgtggatacgatactccacttatcactttattacttggtaaacgatttagtacacttgc 19004325  T
Q  250 c 250  Q
    |    
T  19004326 c 19004326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 264
Target Start/End: Original strand, 15375906 - 15375997
Alignment:
Q  174 gacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc-taatccgatcatca 264  Q
    ||||||||||||||   | |||||| ||||||||| |||||| ||||||| ||| |||| ||||||||||||||||| |||||||| |||||    
T  15375906 gacgaaacgacaatccctgtggataggatactctacttatcattttattatttggtaaacgatttggtacacttgccataatccgaccatca 15375997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 17185517 - 17185459
Alignment:
Q  195 gatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||||||||||| |||||||||||||| ||| |||||||||| ||||||||| ||||    
T  17185517 gatacgatactctacttatcactttattatttggtaaatgatttagtacacttgtctaa 17185459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 24245544 - 24245618
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattac 224  Q
    |||||||||||   ||||||||| ||||||||||||||   | |||||||||||||||| |||||||||||||||    
T  24245544 aaaataagtaacgcgagttgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttattac 24245618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 20744872 - 20744925
Alignment:
Q  211 tatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||||||||||||||||| ||||||||||||||||||||||  |||||| |||||    
T  20744872 tatcactttattacttggtaaatgatttggtacacttgccatatccgaccatca 20744925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 24662043 - 24662213
Alignment:
Q  16 atatatatgggg-attcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctc 114  Q
    |||||||||||| | || ||||||  ||||||| ||||||||| |||||||  |||||| || |||||||||| | ||||||  | |||| || |||| |    
T  24662043 atatatatgggggaatcgaagagtcttaaccgctacttactttactgcaac--aaaacaagtaacttgctctgtttcaaacaactaaaaattgaaatcgc 24662140  T
Q  115 taacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaat 187  Q
    ||||||||  ||||| ||||||||||| | ||  ||||||||||||   || |||||||| |||||| |||||    
T  24662141 taacccttaactcttttattttatatcgttaaactaaaataagtaacgtgaattgtttaggcgaaacaacaat 24662213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 20315447 - 20315529
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    |||||| ||||||| || |||  || |||||||||||||||| ||||||| |||||||||| |||| || ||||||||||||||    
T  20315447 ttgtttggacgaaaggataatccatgtggatacgatactctacttatcacattattacttggtaaacga-ttggtacacttgcc 20315529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 266
Target Start/End: Original strand, 24167601 - 24167700
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatcact 266  Q
    |||||| || |||||||||||  || |  ||| ||||||||| |||  ||||||||||||| |||| |||||  ||||||| ||||||||||||||||||    
T  24167601 ttgtttggaagaaacgacaatccatgtatatatgatactctacttactactttattacttggtaaacgatttaatacacttacctaatccgatcatcact 24167700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 52 - 254
Target Start/End: Original strand, 25402239 - 25402441
Alignment:
Q  52 tacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa-tctctaacccttttctcttctattttatatcataaactta 150  Q
    |||||||||||||||| ||| |||  |||  ||||  | ||||||| | |||| ||||| ||||||||||||  ||||| |||||||| |   |||||||    
T  25402239 tacttttctgcaaccagaaataggaaactacctctattacaaacagataaaaattgcaaatctctaacccttcactcttttattttat-tgtcaaactta 25402337  T
Q  151 aaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    ||||||||||   || |  ||  ||||||||||||||   | ||||||| |||||||| |||||||||  |||||||  |||  ||||||||||||||||    
T  25402338 aaataagtaacgcgaatcattaggacgaaacgacaatccctgtggatacaatactctacttatcacttccttacttggcaaacaatttggtacacttgcc 25402437  T
Q  251 taat 254  Q
    ||||    
T  25402438 taat 25402441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 20419997 - 20419951
Alignment:
Q  208 aattatcactttattacttgctaaatgatttggtacacttgcctaat 254  Q
    |||||||||||||||||||| |||| |||||||||||||| ||||||    
T  20419997 aattatcactttattacttggtaaacgatttggtacacttacctaat 20419951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 23388838 - 23388915
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttg 227  Q
    |||||||||||   || |||||  ||||||| ||||||  || |||||||||||||||| ||||||||||||||||||    
T  23388838 aaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacttatcactttattacttg 23388915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 24140498 - 24140442
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    ||||||| |||||||| |||||||||||||||||| |||| || ||||||||||||||    
T  24140498 tggatacaatactctacttatcactttattacttggtaaacga-ttggtacacttgcc 24140442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 24662212 - 24662257
Alignment:
Q  212 atcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||    
T  24662212 atcactttattacttgataaacgatttggtacacttacctaatccg 24662257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 26121198 - 26121271
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacag 97  Q
    ||||||||||||| | |||||| | ||||||||||||| ||||||||| || | |||||||||  |||||||||    
T  26121198 ggggattcaaagaatcctaaccactacttacttttctgtaaccaaaaatagataacttgctctcttgcaaacag 26121271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 23380284 - 23380360
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||| ||||||  ||||| |||||||| | || |||||| ||||||||||| ||||  |||||||||||||||||||    
T  23380284 gaaatgacaatccatatgaatacgatagtttacttatcagtttattacttggtaaacaatttggtacacttgcctaa 23380360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 34128711 - 34128636
Alignment:
Q  174 gacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    ||||||| |||||||  | ||||||||||| |||| |||||||||||||||||| | || || ||||||||||||||    
T  34128711 gacgaaaggacaattcctgtggatacgatattctacttatcactttattacttggtcaacga-ttggtacacttgcc 34128636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 19051604 - 19051541
Alignment:
Q  194 ggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    |||||||| |||| | |||||||||||||||||  |||| ||||||||||||||  ||||||||    
T  19051604 ggatacgacactcaacttatcactttattactttgtaaacgatttggtacacttttctaatccg 19051541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 24265354 - 24265448
Alignment:
Q  28 attcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||| ||| ||||||||  |||||||||||||||| ||| | |||| ||||||| |  ||||||||| | |||| |||||| |||||||||||    
T  24265354 attcaaatagtcctaaccgctgcttacttttctgcaactaaata-aggtaacttgctttattgcaaacagataaaaattgcaatatctaacccttt 24265448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 24341985 - 24342079
Alignment:
Q  28 attcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||| ||| ||||||||  |||||||||||||||| ||| | |||| ||||||| |  ||||||||| | |||| |||||| |||||||||||    
T  24341985 attcaaatagtcctaaccgctgcttacttttctgcaactaaata-aggtaacttgctttattgcaaacagataaaaattgcaatatctaacccttt 24342079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 26110528 - 26110575
Alignment:
Q  217 tttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||||||||||| |||| |||| |||||||||||||||||||| |||||    
T  26110528 tttattacttgataaacgattcggtacacttgcctaatccgaccatca 26110575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 15544108 - 15544047
Alignment:
Q  191 tatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||| ||||||||||||| | | || ||||||||||| |||| ||||||||||||||||||||    
T  15544108 tatgtatacgatactctactga-cagtttattacttggtaaacgatttggtacacttgcctaa 15544047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 17315100 - 17315182
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaa 232  Q
    ||||||||||| | || |||||  || |||| ||||||  || ||||||||||||| || |||||||||||||||||| ||||    
T  17315100 aaaataagtaactagaattgttcggaagaaaggacaatccatgtggatacgatactttacttatcactttattacttgataaa 17315182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 26120963 - 26120850
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    ||||||||||||   | |||||| ||||||||||||||   | || ||| ||||||||| |||  |||||||||| || ||||  ||||||||||||| |    
T  26120963 aaaataagtaatgctaattgtttggacgaaacgacaatccttttgaatatgatactctacttaa-actttattacatggtaaacaatttggtacactttc 26120865  T
Q  250 ctaatccgatcatca 264  Q
    ||||| |||||||||    
T  26120864 ctaattcgatcatca 26120850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 15375758 - 15375859
Alignment:
Q  13 aatatatatatggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacagg-tcacttgctctgatgcaaacagttcaaaactgcaat 111  Q
    ||||| |||| |||||||| |||| | |||||||  |||||||||| |||||||||||| |||   |||||||||| ||||||||  | |||| ||||||    
T  15375758 aatatgtatagggggattcgaagaatcctaaccgttacttacttttatgcaaccaaaaataggcgaacttgctctgttgcaaacaaataaaaattgcaat 15375857  T
Q  112 ct 113  Q
    ||    
T  15375858 ct 15375859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 28664832 - 28664796
Alignment:
Q  191 tatggatacgatactctaattatcactttattacttg 227  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  28664832 tatgaatacgatactctacttatcactttattacttg 28664796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 32417407 - 32417458
Alignment:
Q  201 atactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||||||| ||| |||||||||||||| |||| |||||||||||||| |||||    
T  32417407 atactctactta-cactttattacttgataaacgatttggtacacttacctaa 32417458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 24 - 255
Target Start/End: Complemental strand, 952 - 722
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttt 123  Q
    ||||||||||||||| ||||||||  |||| |||||| ||||||||  |||||  ||| ||||| ||||||||| | |||| || ||||||||||||||     
T  952 ggggattcaaagagtcctaaccgctgcttagttttctacaaccaaa--caggtatcttactctgttgcaaacaggtaaaaattgaaatctctaaccctta 855  T
Q  124 tctcttctattttatatcataaacttaaaataagtaa--ttggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttat 221  Q
     ||||| ||||||||||| | ||||||||||||||||  | ||| |||||| ||||||||||||||   | | ||||| |||||||| ||||||||||||    
T  854 actcttttattttatatcttcaacttaaaataagtaacgtcgga-ttgtttggacgaaacgacaatccttgttgatacaatactctacttatcactttat 756  T
Q  222 tacttgctaaatgatttggtacacttgcctaatc 255  Q
    |||||| |||| ||||||||||||||||||||||    
T  755 tacttggtaaacgatttggtacacttgcctaatc 722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 55097 - 54845
Alignment:
Q  13 aatatatatatggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatc 112  Q
    |||||| ||| ||||||||||||||| ||||||     || ||||| ||||||||||||||||| ||||||| ||  |||||||  | |||| || ||||    
T  55097 aatataaatagggggattcaaagagtcctaaccagtgttttcttttgtgcaaccaaaaacaggtaacttgctatgtcgcaaacaaataaaaattggaatc 54998  T
Q  113 tctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaa-cgacaatttatatggatacgatactctaatt 211  Q
    |||||||||| ||| || ||||||||||| | ||||||||||||||||    || | ||||||||||| |||||||   | ||||||| |||||||| ||    
T  54997 tctaacccttatcttttttattttatatcgttaacttaaaataagtaacgcaagctatttagacgaaaacgacaatccctgtggatacaatactctactt 54898  T
Q  212 atcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||| |||||    
T  54897 atcactttattacttggtaaacgatttggtacactttcctaatccgaccatca 54845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 48235 - 48306
Alignment:
Q  195 gatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatcact 266  Q
    |||||||||||||| |||||||||||||||||| |||| |||||| |||| |||||  |||||| |||||||    
T  48235 gatacgatactctacttatcactttattacttggtaaacgatttgatacatttgccatatccgaccatcact 48306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 254
Target Start/End: Original strand, 35857 - 36099
Alignment:
Q  13 aatatatatatggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa-t 111  Q
    |||||| ||| |||||||| |||| | ||||||||  ||||||||||||||||||||| ||||| |||| || || | |||| || | |||| ||||| |    
T  35857 aatataaatagggggattctaagaatcctaaccgctgcttacttttctgcaaccaaaatcaggtaactttctttgttccaaatagataaaaattgcaaat 35956  T
Q  112 ctctaaccctttt-ctcttctattttata-tcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaa 209  Q
    ||||||||||||  ||||| ||||||||  |||  ||||||||||||||||   || || ||| || |||||||||||| || ||||||||||||||||     
T  35957 ctctaaccctttaactcttatattttatcgtca--aacttaaaataagtaacacgaattatttggatgaaacgacaattcatgtggatacgatactctac 36054  T
Q  210 ttatcactttattacttgctaaatgatttggtacacttgcctaat 254  Q
    |||||||||||||||||  |||||||||| |||| ||| ||||||    
T  36055 ttatcactttattacttagtaaatgatttagtacgctttcctaat 36099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 255
Target Start/End: Complemental strand, 35745 - 35531
Alignment:
Q  41 taaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaa-tctctaaccctttt-ctcttctattttat 138  Q
    |||||||  ||||| ||||||||||||||| ||||| ||||||| || |||| |||  | |||| ||||| |||||||||||||  ||||| ||||||||    
T  35745 taaccgctgcttacctttctgcaaccaaaa-caggtaacttgctttgttgcagacaaataaaaattgcaaatctctaaccctttaactcttttattttat 35647  T
Q  139 atcat-aaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatt 237  Q
      ||| |||||||||||||||||   || |||||| |||||||||| |||  || ||||||| |||||||| |||||||||||||||||| |||| ||||    
T  35646 --catcaaacttaaaataagtaaggcgaattgtttggacgaaacgaaaatccatgtggatacaatactctatttatcactttattacttgataaacgatt 35549  T
Q  238 tggtacacttgcctaatc 255  Q
     | |||| |||| |||||    
T  35548 agatacatttgcataatc 35531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 114710 - 114574
Alignment:
Q  27 gattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttct 126  Q
    |||||||||||| |||||||    || ||||||||||||||||||||||| | ||| |||| ||||||||| | |||| | |||||||||||| || |||    
T  114710 gattcaaagagtcctaaccgttgtttccttttctgcaaccaaaaacaggtaatttggtctgttgcaaacagataaaaattacaatctctaaccattgtct 114611  T
Q  127 cttctattttatatcataaac---ttaaaataagtaa 160  Q
    ||| ||||||||||||| |||   |||||||||||||    
T  114610 cttttattttatatcatcaactaattaaaataagtaa 114574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 264
Target Start/End: Original strand, 15494 - 15579
Alignment:
Q  179 aacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||||||||  || ||||||||||||||||  ||| ||||||||||||| ||||||||||| |||||||||||||||||| |||||    
T  15494 aacgacaatccatgtggatacgatactctacatattactttattacttggtaaatgatttgatacacttgcctaatccgaccatca 15579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 167 - 264
Target Start/End: Complemental strand, 1816 - 1719
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatcatca 264  Q
    ||||||| || |||||||||||  | |||||||||||||||| |||||||||| ||||||| ||||   |||||||||||| |||||||||| |||||    
T  1816 ttgtttacacaaaacgacaattcctgtggatacgatactctacttatcacttttttacttggtaaacagtttggtacacttacctaatccgaccatca 1719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 150 - 251
Target Start/End: Complemental strand, 70012 - 69911
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc 249  Q
    |||||||||||   || |||||| ||||||||||||||   | || |||||||||| || || ||||||||||||||| |||||||||||||||||||||    
T  70012 aaaataagtaacgagaattgtttggacgaaacgacaatccttgtgtatacgatactttacttgtcactttattacttggtaaatgatttggtacacttgc 69913  T
Q  250 ct 251  Q
    ||    
T  69912 ct 69911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 144 - 265
Target Start/End: Original strand, 181700 - 181820
Alignment:
Q  144 aaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtac 243  Q
    |||| ||||||||||||   || || ||| ||| |||||||||| ||| |||||||||||||| | |||||||||||||||||| ||| |||||||||||    
T  181700 aaacataaaataagtaacacgacttatttggacaaaacgacaatctatgtggatacgatactc-atttatcactttattacttggtaattgatttggtac 181798  T
Q  244 acttgcctaatccgatcatcac 265  Q
    |||||  || ||||| ||||||    
T  181799 acttgtttattccgaccatcac 181820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 264
Target Start/End: Original strand, 89852 - 89967
Alignment:
Q  148 ttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    |||||||||||||   ||||||||||||||||||||||||   | | |||| ||||||||| ||| |||||||||||||| |||| |||||| |||||||    
T  89852 ttaaaataagtaacgcgagttgtttagacgaaacgacaatacttgtagatatgatactctactta-cactttattacttggtaaacgatttgatacactt 89950  T
Q  248 gcctaatccgatcatca 264  Q
    | ||||| ||| |||||    
T  89951 gtctaattcgaccatca 89967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 151 - 254
Target Start/End: Complemental strand, 6385 - 6282
Alignment:
Q  151 aaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcc 250  Q
    |||||||||||  || |||||| |||||||| |||||  || ||||||||||||| || |||| ||||||||||||  |||| |||||| ||||||||||    
T  6385 aaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatacgatactttacttatgactttattacttcgtaaacgatttgatacacttgcc 6286  T
Q  251 taat 254  Q
    ||||    
T  6285 taat 6282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 227
Target Start/End: Original strand, 713 - 900
Alignment:
Q  41 taaccgcaacttacttttctgcaaccaaaaacaggtca-cttgctctgatgcaaacagttcaaaactgcaatct--ctaacccttttctcttctatttta 137  Q
    |||||||  ||||||||||||||||||||||||||| | ||| ||||| ||||||||| | |||| ||||||||  |||| ||      ||| | |||||    
T  713 taaccgcttcttacttttctgcaaccaaaaacaggtaaactttctctgttgcaaacagataaaaattgcaatctttctaaacc------cttatctttta 806  T
Q  138 tatcat-aaactta---aaataagtaat-tggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttg 227  Q
    |||| | |||||||   ||||||||||  |||| |||||| |||||||||||||| |  ||||||||||||||||| ||||||||||||||||||    
T  807 tatcgtcaaacttataaaaataagtaacgtgga-ttgtttggacgaaacgacaatctcaatggatacgatactctacttatcactttattacttg 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 69137 - 69074
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    |||||||||| ||| | |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  69137 tggatacgattctcaacttatcactttattacttggtaa-tgatttggtacacttgcctaatccg 69074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 81561 - 81480
Alignment:
Q  174 gacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    |||||||| |||||  || ||||||| |||| ||| |||||||||||||| ||| |||| ||||| ||| |||||||||||||    
T  81561 gacgaaaccacaatccatgtggatacaatac-ctacttatcactttattatttggtaaacgatttcgtaaacttgcctaatcc 81480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 15871 - 15801
Alignment:
Q  24 ggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaa 94  Q
    |||||||| |||| | ||||||||  |||||||||| |||||||||||||||| |||||||||| ||||||    
T  15871 ggggattcgaagaatactaaccgctgcttacttttccgcaaccaaaaacaggtaacttgctctgttgcaaa 15801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 261
Target Start/End: Original strand, 7429 - 7523
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccgatca 261  Q
    |||||||||| |||||||||||  | |  |||| |||||||| |||||||||||||||||| |||| ||||| ||||| || |||||| ||||||    
T  7429 ttgtttagaccaaacgacaattcttgtaaatacaatactctacttatcactttattacttgataaacgatttagtacattttcctaattcgatca 7523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 18793 - 18851
Alignment:
Q  198 acgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    ||||||||||| |||| | ||||||||||| ||||| ||||||||||||||||||||||    
T  18793 acgatactctacttatgattttattacttgataaataatttggtacacttgcctaatcc 18851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 223078 - 223135
Alignment:
Q  198 acgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatc 255  Q
    ||||||||||| |||| | ||||||||||| ||||| |||||| ||||||||||||||    
T  223078 acgatactctacttatgattttattacttgataaataatttggcacacttgcctaatc 223135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 248
Target Start/End: Complemental strand, 2548 - 2371
Alignment:
Q  69 aaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaataagtaattggagtt 168  Q
    |||||||| |||| ||||| ||||||||| |  ||| | |||||||||||||||  ||||| ||||||| ||  | || | ||||||| |||    | ||    
T  2548 aaacaggtaactttctctgttgcaaacagat--aaattacaatctctaacccttcactcttttattttaaattgtcaaatcaaaataattaacgctaatt 2451  T
Q  169 gtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    |||| || |||| | ||||  || |||||||||||||||| ||||| |||||||| ||| |||| |||||||||||||||    
T  2450 gtttggaagaaatgtcaatccatgtggatacgatactctacttatccctttattatttggtaaacgatttggtacacttg 2371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 248
Target Start/End: Complemental strand, 2579 - 2402
Alignment:
Q  69 aaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaacttaaaataagtaattggagtt 168  Q
    |||||||| |||| ||||| ||||||||| |  ||| | |||||||||||||||  ||||| ||||||| ||  | || | ||||||| |||    | ||    
T  2579 aaacaggtaactttctctgttgcaaacagat--aaattacaatctctaacccttcactcttttattttaaattgtcaaatcaaaataattaacgctaatt 2482  T
Q  169 gtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttg 248  Q
    |||| || |||| | ||||  || |||||||||||||||| ||||| |||||||| ||| |||| |||||||||||||||    
T  2481 gtttggaagaaatgtcaatccatgtggatacgatactctacttatccctttattatttggtaaacgatttggtacacttg 2402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 29975 - 29909
Alignment:
Q  180 acgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacactt 247  Q
    |||||||| | ||||||||| |||||||| ||| |||||||||||||| |||| ||||||||||||||    
T  29975 acgacaatctctatggataccatactctactta-cactttattacttggtaaacgatttggtacactt 29909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 4500 - 4589
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    ||||||| |||||| ||||||  || |||||||||||||||  ||| || ||| ||||||| |||| |||| |||||| |||||||||||    
T  4500 ttgtttaaacgaaatgacaatccatgtggatacgatactctgcttaccatttttttacttggtaaacgattaggtacagttgcctaatcc 4589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 177 - 254
Target Start/End: Complemental strand, 78666 - 78589
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaat 254  Q
    |||||||||||   |||||||||||| ||  | |||||| ||||||||||| |||| ||| |||||||||||||||||    
T  78666 gaaacgacaatccttatggatacgatgcttaacttatcagtttattacttggtaaacgatatggtacacttgcctaat 78589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 3630 - 3553
Alignment:
Q  150 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttg 227  Q
    |||||||||||   || |||||  ||||||| ||||||  || |||||||||||||||| ||||||||||||||||||    
T  3630 aaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacttatcactttattacttg 3553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 12181 - 12105
Alignment:
Q  177 gaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaa 253  Q
    |||| ||||||  ||||| |||||||| | || |||||| ||||||||||| ||||  |||||||||||||||||||    
T  12181 gaaatgacaatccatatgaatacgatagtttacttatcagtttattacttggtaaacaatttggtacacttgcctaa 12105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 3208 - 3145
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    ||||||||||||||||  || |||||||||||||| ||||  |||| ||||||||||||||||||    
T  3208 tggatacgatactctacata-cactttattacttggtaaacaattttgtacacttgcctaatccg 3145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 139
Target Start/End: Original strand, 151 - 263
Alignment:
Q  27 gattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttct 126  Q
    |||||||||||| |||||||    || ||||||||||||||||||| | | | ||| | || ||||||||| | |||| |||||||||||||| || | |    
T  151 gattcaaagagtcctaaccgttgtttccttttctgcaaccaaaaaccgataatttggtttgttgcaaacagataaaaattgcaatctctaaccattattt 250  T
Q  127 cttctattttata 139  Q
    ||| |||||||||    
T  251 cttttattttata 263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 148
Target Start/End: Original strand, 5668 - 5759
Alignment:
Q  54 cttttctgcaaccaaaaacaggtcacttgctctgatgcaaacagttcaaaactgcaatctctaacccttttctcttctattttatatcataaact 148  Q
    ||||||| ||||||||||||||| | ||| |||  ||||||||| | |||| ||||||||||||   || |||||| ||||||||||||| ||||    
T  5668 cttttctacaaccaaaaacaggtaatttggtctattgcaaacagataaaaattgcaatctctaa---ttgtctcttttattttatatcatcaact 5759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 51162 - 51114
Alignment:
Q  210 ttatcactttattacttgctaaatgatttggtacacttgcctaatccga 258  Q
    |||||||||||||||||| ||||  ||||||| ||||||||||||||||    
T  51162 ttatcactttattacttggtaaacaatttggttcacttgcctaatccga 51114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 264
Target Start/End: Original strand, 2886 - 2921
Alignment:
Q  229 taaatgatttggtacacttgcctaatccgatcatca 264  Q
    |||| |||||||||||||||||||||||||||||||    
T  2886 taaacgatttggtacacttgcctaatccgatcatca 2921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 2768 - 2874
Alignment:
Q  101 aaaactgcaatctctaacccttttctcttctatt-ttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatac 199  Q
    |||| |||||||||||||||||  ||||| |||| ||||||  | ||   |||||||||||   || |||||| ||||||||||||||| || |||||||    
T  2768 aaaattgcaatctctaacccttaactcttttattattatattgtcaaaacaaaataagtaacacgaattgtttggacgaaacgacaattcatgtggatac 2867  T
Q  200 gatactc 206  Q
    |||||||    
T  2868 gatactc 2874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 19192 - 19103
Alignment:
Q  167 ttgtttagacgaaacgacaatttatatggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatccg 257  Q
    |||||||||| | |||| |||| || || |||||||| | || |||||| |||||||||||  |||  |||||||||||||||||||||||    
T  19192 ttgtttagacaacacgataattcatgtgcatacgataatttacttatcattttattacttga-aaacaatttggtacacttgcctaatccg 19103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 21332 - 21258
Alignment:
Q  193 tggatacgatactctaattatcactttattacttgctaaatgatttggtacacttgc--ctaatccgatcatcact 266  Q
    |||||| ||||||||| |||||||||||||||||  | || || |||||||||||||  ||||||||| |||||||    
T  21332 tggatatgatactctacttatcactttattactttgttaacga-ttggtacacttgctactaatccgaccatcact 21258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 72125 - 72065
Alignment:
Q  196 atacgatactctaattatcactttattacttgctaaatgatttggtacacttgcctaatcc 256  Q
    |||| |||||||| |||||||||||||||||| | ||  ||||||||||||| || |||||    
T  72125 ataccatactctacttatcactttattacttggttaacaatttggtacacttaccaaatcc 72065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University