View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17268_low_13 (Length: 279)
Name: NF17268_low_13
Description: NF17268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17268_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 32 - 259
Target Start/End: Complemental strand, 35386818 - 35386591
Alignment:
| Q |
32 |
ttttaatttatcattagcagaaacatttctgccaaaaataggaaaataaaattcttatgatcgaaggagtctatactagtagagacaagtgttccttctt |
131 |
Q |
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| T |
35386818 |
ttttaatttatcattagcagaaacatttctgccaaaaataggaaaataaaattcttatgatcgaaggagtctatactagtagagacaagtgttccttctt |
35386719 |
T |
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| Q |
132 |
cattgccacgagtcattccttggtactcttaagtcagtatccattctccaacattccaagtgtctcttgctcacttactcacaccttatatacattgatt |
231 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
35386718 |
cattgccacgagtcattccttggtactcttaagtcagtatccattctccaacattccaagtgtctcttgctcacttactcacaccttatatacattcatt |
35386619 |
T |
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| Q |
232 |
cactcaatatatatttgttggtacctca |
259 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
35386618 |
cactcaatatatatttgttggtacctca |
35386591 |
T |
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