View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17268_low_15 (Length: 254)
Name: NF17268_low_15
Description: NF17268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17268_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 9788204 - 9788438
Alignment:
| Q |
1 |
agaatcctgttaatagtgttccaaagattcacatcacaccaagcttgaatagcacttgggcattcaaacaagtgggaatgacactcatctactactaagg |
100 |
Q |
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| T |
9788204 |
agaatcctgttaatagtgttccaaagattcacatcacaccaagcttgaatagcacttggacattcaaacaagtgggaatgacactcatctactactaagg |
9788303 |
T |
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| Q |
101 |
ggtgtatgagttgggagacatccatggcgtactctctaacacaaagtttttaccttagggggtactttgagtttccatattagctcgtttggcctagtac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
9788304 |
ggtgtatgagttgggagacatccatggcgtactctctaacacaaagtttttaccttaggggttactttgagtttccatattagctcgtttggcctagtac |
9788403 |
T |
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| Q |
201 |
atgcagatgagaatttttaacaatctcgttcacac |
235 |
Q |
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||||| ||||||||||||||||||||||||||||| |
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| T |
9788404 |
atgcaaatgagaatttttaacaatctcgttcacac |
9788438 |
T |
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